F448775

General Info

Members Datasets Scaffolds Average Seq Length
461 291 922 68

Family's Representative Sequence

Representative Sequence 3300039450|Ga0436363_0396805|Ga0436363_0396805_494_724
Length 76
Sequence MFLFERLTMATGTVKWFNAQKGYGFIQPDDGSKDVFVHISAVEQSGIGNLHEGQKLSYEVERGQQGKTSAVALRAQ

Samples

Sample ID Description Type Environment
1 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
2 3300003308 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003544 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003574 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
6 3300003735 Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_23 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
7 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
8 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
9 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
10 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
20 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
23 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
29 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
30 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
31 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
36 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
37 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
38 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
39 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
40 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
41 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
42 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
45 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
46 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
49 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
50 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
51 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
52 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
53 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
54 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
55 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
56 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
57 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
58 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
59 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
60 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
61 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
62 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
63 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
64 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
65 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
68 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
69 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
70 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
71 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
72 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
73 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
74 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
75 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
76 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
77 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
78 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
79 3300013062 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
81 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
82 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
83 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
84 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
85 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
86 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
87 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
88 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
89 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
90 3300019162 Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU3 metaT (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300019183 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA1 metaT (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
92 3300019188 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE2 metaT (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
93 3300019190 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE3 metaT (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
95 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
96 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
97 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
98 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
99 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
100 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
101 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
102 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
103 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
104 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
105 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
106 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
107 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
108 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
109 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
149 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
152 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
153 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
154 3300029277 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B3.ctcc.R1 Metatranscriptome Rhizosphere
155 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
156 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
157 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
158 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
159 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
160 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
161 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
162 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
163 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
164 3300030762 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
165 3300030863 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
166 3300030877 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
167 3300030880 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
168 3300031043 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
169 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
170 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
171 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
172 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
173 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
174 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
175 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
176 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
177 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
178 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
179 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
180 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
181 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
182 3300032120 Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
183 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
184 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
185 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
186 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
187 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
188 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
189 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
190 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
191 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
192 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
193 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
194 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
195 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
196 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
197 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
198 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
199 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
200 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
201 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
202 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
203 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
204 3300036457 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
205 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
206 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
207 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
208 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
209 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
210 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
211 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
212 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
213 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
214 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
215 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
216 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
217 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
218 3300041461 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaT Metatranscriptome Rhizoplane
219 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
220 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
221 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
222 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
223 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
224 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
225 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
226 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
227 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
228 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
229 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
230 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
231 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
232 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
233 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
234 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
235 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
236 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
237 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
238 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
239 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
240 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
241 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
242 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
243 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
244 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
245 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
246 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
247 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
248 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
249 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
250 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
251 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
252 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
253 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
254 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
255 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
256 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
257 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
258 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
259 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
260 3300049529 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
261 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
262 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
263 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
264 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
265 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
266 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
267 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
268 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
269 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
270 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
271 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
272 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
273 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
274 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
275 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
276 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
277 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
278 3300059510 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 55R_CD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
279 3300059512 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 57R_AW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
280 3300059622 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 222R_AD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
281 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
282 2643221613 Oerskovia sp. Root22 Isolate Unclassified
283 2643221721 Oerskovia sp. Root918 Isolate Unclassified
284 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
285 2858868258 Micromonospora sp. MH33 Isolate Unclassified
286 2867369537 Streptomyces sp. Z26 Isolate Unclassified
287 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
288 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
289 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
290 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
291 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 78.31
Metatranscriptomes 19.52
Isolates 2.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.87
Nodule 0
Rhizoplane 1.95
Rhizosphere 88.07
Stem 0
Stem Tuber 0
Unclassified 0.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436363_0396805 3300039450 Bacteria 963
2 Ga0006777J48905_1074684 3300003308 Bacteria 529
3 Ga0007417J51691_1182224 3300003544 Bacteria 522
4 Ga0007410J51695_1044741 3300003574 Bacteria 675
5 Ga0032354_1058919 3300003693 Bacteria 543
6 Ga0006780_1011297 3300003735 Bacteria 589
7 Ga0006780_1023150 3300003735 Bacteria 565
8 Ga0058863_10014547 3300004799 Bacteria 519
9 Ga0058863_10044814 3300004799 Bacteria 654
10 Ga0058863_11906022 3300004799 Bacteria 581
11 Ga0058863_11946208 3300004799 Bacteria 588
12 Ga0058863_11970705 3300004799 Bacteria 791
13 Ga0058861_10060084 3300004800 Bacteria 769
14 Ga0058861_11757439 3300004800 Bacteria 693
15 Ga0058860_11565486 3300004801 Bacteria 743
16 Ga0058862_10040278 3300004803 Bacteria 580
17 Ga0058862_10078365 3300004803 Bacteria 657
18 Ga0058862_12112439 3300004803 Bacteria 581
19 Ga0058862_12305169 3300004803 Bacteria 593
20 Ga0058862_12453161 3300004803 Bacteria 545
21 Ga0058862_12873387 3300004803 Bacteria 647
22 Ga0070658_10013166 3300005327 Bacteria 6635
23 Ga0070658_10837212 3300005327 Bacteria 800
24 Ga0070683_101973954 3300005329 Bacteria 561
25 Ga0068869_100412688 3300005334 Bacteria 1113
26 Ga0070666_10247119 3300005335 Bacteria 1262
27 Ga0070680_101712160 3300005336 Bacteria 545
28 Ga0070682_100000872 3300005337 Bacteria 17577
29 Ga0068868_101434598 3300005338 Bacteria 645
30 Ga0070660_100064618 3300005339 Bacteria 2847
31 Ga0070660_100250616 3300005339 Bacteria 1444
32 Ga0070689_100589541 3300005340 Bacteria 962
33 Ga0070691_10149847 3300005341 Bacteria 1195
34 Ga0070668_100000712 3300005347 Bacteria 22762
35 Ga0070668_100197694 3300005347 Bacteria 1650
36 Ga0070669_100289264 3300005353 Bacteria 1315
37 Ga0070675_101562048 3300005354 Bacteria 609
38 Ga0070671_100310987 3300005355 Bacteria 1342
39 Ga0070671_100462658 3300005355 Unclassified 1089
40 Ga0070673_100650556 3300005364 Bacteria 965
41 Ga0070673_102407242 3300005364 Bacteria 501
42 Ga0070659_100006972 3300005366 Bacteria 8181
43 Ga0070714_100008500 3300005435 Bacteria 8021
44 Ga0070714_100234212 3300005435 Bacteria 1693
45 Ga0070714_101161210 3300005435 Bacteria 753
46 Ga0070713_100170454 3300005436 Bacteria 1950
47 Ga0070713_100435619 3300005436 Bacteria 1229
48 Ga0070713_101307537 3300005436 Bacteria 703
49 Ga0070710_10001047 3300005437 Bacteria 13133
50 Ga0070711_100144961 3300005439 Bacteria 1785
51 Ga0070708_100139840 3300005445 Bacteria 2245
52 Ga0070663_100779811 3300005455 Bacteria 818
53 Ga0070663_101647285 3300005455 Bacteria 573
54 Ga0070663_101914985 3300005455 Bacteria 533
55 Ga0070662_100167118 3300005457 Bacteria 1724
56 Ga0070681_10074636 3300005458 Bacteria 3352
57 Ga0070681_10083706 3300005458 Bacteria 3143
58 Ga0070681_10198281 3300005458 Bacteria 1926
59 Ga0070681_10321831 3300005458 Bacteria 1456
60 Ga0070681_11442953 3300005458 Bacteria 612
61 Ga0070685_10212997 3300005466 Bacteria 1262
62 Ga0070685_11146721 3300005466 Bacteria 589
63 Ga0070706_100174009 3300005467 Bacteria 2010
64 Ga0070707_100383235 3300005468 Bacteria 1366
65 Ga0070698_100249000 3300005471 Bacteria 1710
66 Ga0070698_101254592 3300005471 Bacteria 691
67 Ga0070698_101459883 3300005471 Bacteria 635
68 Ga0070699_100107496 3300005518 Bacteria 2448
69 Ga0070679_100013999 3300005530 Bacteria 7689
70 Ga0070679_100149692 3300005530 Bacteria 2311
71 Ga0070684_101159456 3300005535 Bacteria 727
72 Ga0070684_102013709 3300005535 Bacteria 545
73 Ga0070697_100140046 3300005536 Bacteria 2034
74 Ga0068853_100002908 3300005539 Bacteria 13013
75 Ga0070686_101113262 3300005544 Bacteria 653
76 Ga0070695_101142821 3300005545 Bacteria 639
77 Ga0070695_101594899 3300005545 Bacteria 545
78 Ga0070693_100009912 3300005547 Bacteria 4756
79 Ga0070665_101884751 3300005548 Bacteria 604
80 Ga0068855_100068371 3300005563 Bacteria 4136
81 Ga0068855_102220957 3300005563 Bacteria 551
82 Ga0070664_100550954 3300005564 Bacteria 1066
83 Ga0068857_101027156 3300005577 Bacteria 794
84 Ga0068857_101306028 3300005577 Bacteria 704
85 Ga0068856_102456887 3300005614 Bacteria 528
86 Ga0068856_102563032 3300005614 Bacteria 516
87 Ga0068859_101995997 3300005617 Bacteria 641
88 Ga0068864_101143030 3300005618 Bacteria 776
89 Ga0068861_100152920 3300005719 Bacteria 1895
90 Ga0068863_100288639 3300005841 Bacteria 1590
91 Ga0068863_101836736 3300005841 Bacteria 616
92 Ga0068858_100080137 3300005842 Bacteria 3034
93 Ga0068860_100076344 3300005843 Bacteria 3187
94 Ga0068862_100014112 3300005844 Bacteria 6625
95 Ga0068862_100255629 3300005844 Bacteria 1598
96 Ga0081455_10630305 3300005937 Bacteria 694
97 Ga0070717_10163366 3300006028 Bacteria 1933
98 Ga0070717_10281284 3300006028 Bacteria 1476
99 Ga0070712_100014232 3300006175 Bacteria 5105
100 Ga0075367_10211486 3300006178 Bacteria 1213
101 Ga0068871_102233168 3300006358 Bacteria 522
102 Ga0075434_102110852 3300006871 Bacteria 568
103 Ga0075436_101006099 3300006914 Bacteria 626
104 Ga0075436_101232048 3300006914 Bacteria 565
105 Ga0097620_101995924 3300006931 Bacteria 641
106 Ga0075435_101794491 3300007076 Bacteria 538
107 Ga0099794_10604416 3300007265 Bacteria 581
108 Ga0099795_10240997 3300007788 Bacteria 776
109 Ga0105240_10203788 3300009093 Bacteria 2317
110 Ga0105240_10647228 3300009093 Bacteria 1159
111 Ga0105240_10819923 3300009093 Bacteria 1007
112 Ga0105240_11489229 3300009093 Bacteria 710
113 Ga0105240_11698509 3300009093 Bacteria 659
114 Ga0105247_10545095 3300009101 Bacteria 852
115 Ga0105243_11419895 3300009148 Bacteria 715
116 Ga0105243_11565626 3300009148 Bacteria 685
117 Ga0105241_10107731 3300009174 Bacteria 2226
118 Ga0105241_11245948 3300009174 Bacteria 706
119 Ga0105248_10596839 3300009177 Bacteria 1246
120 Ga0105238_10519803 3300009551 Bacteria 1193
121 Ga0099796_10144194 3300010159 Bacteria 933
122 Ga0105239_10298464 3300010375 Bacteria 1814
123 Ga0105239_11710754 3300010375 Bacteria 728
124 Ga0105246_10311684 3300011119 Bacteria 1275
125 Ga0105246_11194744 3300011119 Bacteria 700
126 Ga0154010_141552 3300013062 Bacteria 575
127 Ga0157373_10004253 3300013100 Bacteria 10798
128 Ga0157370_10008512 3300013104 Bacteria 11063
129 Ga0157370_11546563 3300013104 Bacteria 596
130 Ga0157369_11916043 3300013105 Bacteria 602
131 Ga0157374_10546698 3300013296 Bacteria 1165
132 Ga0157372_10004024 3300013307 Bacteria 15765
133 Ga0157372_11267628 3300013307 Bacteria 851
134 Ga0157375_10410719 3300013308 Bacteria 1520
135 Ga0157375_12031519 3300013308 Bacteria 683
136 Ga0163163_10216514 3300014325 Bacteria 1964
137 Ga0157380_11592243 3300014326 Bacteria 708
138 Ga0157380_11876793 3300014326 Bacteria 659
139 Ga0157379_10300689 3300014968 Bacteria 1462
140 Ga0157379_12440845 3300014968 Bacteria 522
141 Ga0157376_10643541 3300014969 Bacteria 1060
142 Ga0184597_124399 3300019162 Bacteria 575
143 Ga0184601_139311 3300019183 Bacteria 596
144 Ga0184599_130980 3300019188 Bacteria 629
145 Ga0184599_140892 3300019188 Bacteria 617
146 Ga0184599_153412 3300019188 Bacteria 776
147 Ga0184600_112617 3300019190 Bacteria 542
148 Ga0197907_10102765 3300020069 Bacteria 914
149 Ga0197907_10282638 3300020069 Bacteria 592
150 Ga0197907_10421753 3300020069 Bacteria 639
151 Ga0197907_10509266 3300020069 Bacteria 702
152 Ga0197907_10817861 3300020069 Bacteria 1378
153 Ga0197907_11029206 3300020069 Bacteria 878
154 Ga0206356_10992741 3300020070 Bacteria 749
155 Ga0206349_1271126 3300020075 Bacteria 682
156 Ga0206349_1642906 3300020075 Bacteria 906
157 Ga0206355_1016581 3300020076 Bacteria 907
158 Ga0206355_1184942 3300020076 Bacteria 592
159 Ga0206355_1246895 3300020076 Bacteria 766
160 Ga0206355_1313775 3300020076 Bacteria 764
161 Ga0206355_1361710 3300020076 Bacteria 530
162 Ga0206355_1579859 3300020076 Bacteria 520
163 Ga0206355_1599485 3300020076 Bacteria 858
164 Ga0206351_10847115 3300020077 Bacteria 711
165 Ga0206352_10449183 3300020078 Bacteria 855
166 Ga0206352_10490373 3300020078 Bacteria 748
167 Ga0206352_10779299 3300020078 Bacteria 521
168 Ga0206350_10161280 3300020080 Bacteria 592
169 Ga0206354_11147033 3300020081 Bacteria 514
170 Ga0206354_11597364 3300020081 Bacteria 617
171 Ga0206354_11609644 3300020081 Bacteria 1297
172 Ga0206354_11686775 3300020081 Bacteria 681
173 Ga0206353_10256396 3300020082 Bacteria 1943
174 Ga0206353_10376942 3300020082 Bacteria 1623
175 Ga0206353_10841938 3300020082 Bacteria 580
176 Ga0206353_11866163 3300020082 Bacteria 646
177 Ga0154015_1278940 3300020610 Bacteria 591
178 Ga0213873_10018534 3300021358 Bacteria 1602
179 Ga0213873_10057852 3300021358 Bacteria 1042
180 Ga0213873_10325340 3300021358 Bacteria 500
181 Ga0213872_10029786 3300021361 Bacteria 2503
182 Ga0213872_10391168 3300021361 Bacteria 565
183 Ga0213875_10000462 3300021388 Bacteria 35114
184 Ga0213875_10000552 3300021388 Bacteria 30617
185 Ga0213875_10000871 3300021388 Bacteria 22203
186 Ga0213875_10001270 3300021388 Bacteria 16944
187 Ga0213875_10023746 3300021388 Bacteria 2927
188 Ga0213875_10071940 3300021388 Bacteria 1614
189 Ga0213875_10115919 3300021388 Bacteria 1251
190 Ga0213871_10032548 3300021441 Bacteria 1366
191 Ga0213871_10185419 3300021441 Bacteria 644
192 Ga0224712_10036470 3300022467 Bacteria 1822
193 Ga0224712_10042293 3300022467 Bacteria 1726
194 Ga0224712_10237721 3300022467 Bacteria 838
195 Ga0224712_10266527 3300022467 Bacteria 794
196 Ga0224712_10370361 3300022467 Bacteria 679
197 Ga0207682_10563677 3300025893 Bacteria 538
198 Ga0207692_10001188 3300025898 Bacteria 9654
199 Ga0207692_10042964 3300025898 Bacteria 2246
200 Ga0207710_10678891 3300025900 Bacteria 540
201 Ga0207688_10167577 3300025901 Bacteria 1305
202 Ga0207680_10163232 3300025903 Bacteria 1496
203 Ga0207685_10587274 3300025905 Bacteria 596
204 Ga0207699_10551467 3300025906 Bacteria 836
205 Ga0207705_10187922 3300025909 Bacteria 1561
206 Ga0207705_10452459 3300025909 Bacteria 996
207 Ga0207684_11555578 3300025910 Bacteria 537
208 Ga0207707_10027776 3300025912 Bacteria 4947
209 Ga0207707_10070281 3300025912 Bacteria 3051
210 Ga0207707_11207616 3300025912 Bacteria 612
211 Ga0207695_10140837 3300025913 Bacteria 2361
212 Ga0207695_11195516 3300025913 Bacteria 640
213 Ga0207695_11272750 3300025913 Bacteria 616
214 Ga0207695_11473161 3300025913 Bacteria 561
215 Ga0207693_10169245 3300025915 Bacteria 1721
216 Ga0207660_10025900 3300025917 Bacteria 3988
217 Ga0207660_11530283 3300025917 Bacteria 539
218 Ga0207657_10068560 3300025919 Bacteria 3013
219 Ga0207657_10587950 3300025919 Bacteria 869
220 Ga0207649_10889445 3300025920 Bacteria 698
221 Ga0207652_10032528 3300025921 Bacteria 4386
222 Ga0207652_10639427 3300025921 Bacteria 952
223 Ga0207652_10640581 3300025921 Bacteria 951
224 Ga0207681_10371992 3300025923 Bacteria 1148
225 Ga0207659_10675421 3300025926 Bacteria 884
226 Ga0207659_11771820 3300025926 Bacteria 525
227 Ga0207700_10418873 3300025928 Bacteria 1176
228 Ga0207700_10648409 3300025928 Bacteria 941
229 Ga0207664_10009771 3300025929 Bacteria 6749
230 Ga0207664_10748798 3300025929 Bacteria 879
231 Ga0207664_10906393 3300025929 Bacteria 791
232 Ga0207690_10108538 3300025932 Bacteria 1995
233 Ga0207706_10130955 3300025933 Bacteria 2206
234 Ga0207670_11184948 3300025936 Bacteria 646
235 Ga0207704_10799575 3300025938 Bacteria 787
236 Ga0207711_10889924 3300025941 Bacteria 828
237 Ga0207689_10363585 3300025942 Bacteria 1203
238 Ga0207661_11430141 3300025944 Bacteria 634
239 Ga0207667_10153756 3300025949 Bacteria 2367
240 Ga0207651_12151169 3300025960 Bacteria 501
241 Ga0207712_11518107 3300025961 Bacteria 600
242 Ga0207668_10001866 3300025972 Bacteria 12302
243 Ga0207668_10079770 3300025972 Bacteria 2369
244 Ga0207668_10785574 3300025972 Bacteria 842
245 Ga0207658_10301746 3300025986 Bacteria 1380
246 Ga0207677_10891755 3300026023 Bacteria 801
247 Ga0207703_10361874 3300026035 Bacteria 1338
248 Ga0207703_11686467 3300026035 Bacteria 609
249 Ga0207639_10006204 3300026041 Bacteria 8120
250 Ga0207678_10300423 3300026067 Bacteria 1379
251 Ga0207678_10365246 3300026067 Bacteria 1246
252 Ga0207641_10257611 3300026088 Bacteria 1632
253 Ga0207641_10532298 3300026088 Bacteria 1144
254 Ga0207641_11693203 3300026088 Bacteria 634
255 Ga0207674_10166017 3300026116 Bacteria 2162
256 Ga0207674_10949668 3300026116 Bacteria 828
257 Ga0207675_100576191 3300026118 Bacteria 1127
258 Ga0207675_101895387 3300026118 Bacteria 615
259 Ga0209967_1026556 3300027364 Bacteria 860
260 Ga0268266_10211947 3300028379 Bacteria 1777
261 Ga0268265_10073721 3300028380 Bacteria 2667
262 Ga0268265_10669844 3300028380 Bacteria 999
263 Ga0265334_10179004 3300028573 Bacteria 741
264 Ga0307517_10155294 3300028786 Bacteria 1555
265 Ga0265338_10033441 3300028800 Bacteria 4990
266 Ga0311001_1031577 3300029277 Bacteria 588
267 Ga0307511_10052372 3300030521 Bacteria 3253
268 Ga0307512_10123106 3300030522 Bacteria 1657
269 Ga0316177_1179474 3300030731 Bacteria 9555
270 Ga0316176_1078293 3300030732 Bacteria 2718
271 Ga0314311_1010152 3300030733 Bacteria 9106
272 Ga0316180_1175689 3300030736 Bacteria 1351
273 Ga0316183_1146651 3300030742 Bacteria 564
274 Ga0316181_1160906 3300030744 Bacteria 1680
275 Ga0316182_1154208 3300030745 Bacteria 1496
276 Ga0265775_102622 3300030762 Bacteria 938
277 Ga0265766_1009531 3300030863 Bacteria 681
278 Ga0265777_105141 3300030877 Bacteria 855
279 Ga0265777_118742 3300030877 Bacteria 561
280 Ga0265776_108459 3300030880 Bacteria 585
281 Ga0265779_104055 3300031043 Bacteria 769
282 Ga0265779_107267 3300031043 Bacteria 633
283 Ga0265779_114026 3300031043 Bacteria 518
284 Ga0265327_10017555 3300031251 Bacteria 4483
285 Ga0307513_10226641 3300031456 Bacteria 1685
286 Ga0307509_10105157 3300031507 Bacteria 2845
287 Ga0307408_102246581 3300031548 Bacteria 528
288 Ga0265313_10338498 3300031595 Bacteria 598
289 Ga0307508_10063977 3300031616 Bacteria 3244
290 Ga0307508_10074854 3300031616 Bacteria 2963
291 Ga0307508_10304628 3300031616 Bacteria 1186
292 Ga0316576_10611539 3300031727 Bacteria 795
293 Ga0307405_10208879 3300031731 Bacteria 1423
294 Ga0307413_10825886 3300031824 Bacteria 781
295 Ga0307412_10744987 3300031911 Bacteria 845
296 Ga0307409_102410528 3300031995 Bacteria 555
297 Ga0307416_103298844 3300032002 Bacteria 540
298 Ga0307416_103841459 3300032002 Bacteria 503
299 Ga0307411_10194588 3300032005 Bacteria 1551
300 Ga0307411_11485622 3300032005 Bacteria 622
301 Ga0316053_108543 3300032120 Bacteria 693
302 Ga0307415_100106010 3300032126 Bacteria 2074
303 Ga0316583_10010464 3300032133 Bacteria 3346
304 Ga0316585_10121752 3300032137 Bacteria 859
305 Ga0316593_10160204 3300032168 Bacteria 822
306 Ga0316593_10276554 3300032168 Bacteria 632
307 Ga0307507_10000158 3300033179 Bacteria 120194
308 Ga0307507_10061783 3300033179 Bacteria 3485
309 Ga0307507_10234721 3300033179 Bacteria 1210
310 Ga0307510_10102615 3300033180 Bacteria 2642
311 Ga0316592_1171575 3300033524 Bacteria 517
312 Ga0316586_1037375 3300033527 Bacteria 846
313 Ga0316586_1078891 3300033527 Bacteria 613
314 Ga0316587_1049784 3300033529 Bacteria 766
315 Ga0316596_1107199 3300033541 Bacteria 757
316 Ga0373934_0518520 3300035086 Bacteria 501
317 Ga0373953_0056670 3300035117 Bacteria 1594
318 Ga0373954_0020969 3300035118 Bacteria 2958
319 Ga0373956_0109011 3300035119 Bacteria 1288
320 Ga0373955_0027502 3300035172 Bacteria 2941
321 Ga0316574_0090540 3300035398 Bacteria 1950
322 Ga0373931_0874896 3300035691 Bacteria 603
323 Ga0373935_0013197 3300035692 Bacteria 4982
324 Ga0373933_0823086 3300035724 Bacteria 611
325 Ga0373947_0040294 3300035725 Bacteria 2782
326 Ga0373937_0005300 3300036401 Bacteria 11020
327 Ga0373937_0059372 3300036401 Bacteria 3515
328 Ga0373937_0435065 3300036401 Bacteria 1245
329 Ga0265778_023552 3300036457 Bacteria 771
330 Ga0265778_030571 3300036457 Bacteria 695
331 Ga0265778_043009 3300036457 Bacteria 605
332 Ga0265778_063364 3300036457 Bacteria 519
333 Ga0265778_067606 3300036457 Bacteria 504
334 Ga0316582_0318259 3300036647 Bacteria 1069
335 Ga0316584_0235532 3300036712 Bacteria 1341
336 Ga0373925_1754983 3300037068 Bacteria 506
337 Ga0395900_0597229 3300037418 Bacteria 1045
338 Ga0395905_0068733 3300037471 Bacteria 3318
339 Ga0436364_0055069 3300037853 Bacteria 4639
340 Ga0436364_0440208 3300037853 Bacteria 1653
341 Ga0436364_0446735 3300037853 Bacteria 53239
342 Ga0436364_1284200 3300037853 Bacteria 100206
343 Ga0436364_1385478 3300037853 Bacteria 81069
344 Ga0436365_0990657 3300039437 Bacteria 724
345 Ga0436360_0140532 3300039438 Bacteria 737
346 Ga0436360_0181891 3300039438 Bacteria 888
347 Ga0436360_0217582 3300039438 Bacteria 711
348 Ga0436360_0301660 3300039438 Bacteria 555
349 Ga0436360_0517661 3300039438 Bacteria 2564
350 Ga0436360_0693057 3300039438 Bacteria 5079
351 Ga0436360_0765080 3300039438 Bacteria 1616
352 Ga0436360_0842629 3300039438 Bacteria 2476
353 Ga0436361_0020440 3300039447 Bacteria 2334
354 Ga0436361_0036926 3300039447 Bacteria 763
355 Ga0436361_0122066 3300039447 Bacteria 638
356 Ga0436361_0204595 3300039447 Bacteria 737
357 Ga0436361_0658394 3300039447 Bacteria 19974
358 Ga0436361_0700209 3300039447 Bacteria 2243
359 Ga0436361_1149293 3300039447 Bacteria 6067
360 Ga0436361_1222434 3300039447 Bacteria 1856
361 Ga0436363_0076716 3300039450 Bacteria 750
362 Ga0436363_1527224 3300039450 Bacteria 771
363 Ga0436362_0436888 3300039453 Bacteria 1098
364 Ga0436362_0584849 3300039453 Bacteria 5582
365 Ga0436362_0680931 3300039453 Bacteria 2012
366 Ga0436362_0758936 3300039453 Bacteria 1088
367 Ga0436362_1017034 3300039453 Bacteria 633
368 Ga0451791_1517526 3300041451 Bacteria 527
369 Ga0451797_0920157 3300041453 Bacteria 1214
370 Ga0451802_1558625 3300041460 Bacteria 647
371 Ga0451805_065026 3300041461 Bacteria 760
372 Ga0451804_0670496 3300041463 Bacteria 787
373 Ga0451807_0984760 3300041486 Bacteria 612
374 Ga0451837_1427384 3300041494 Bacteria 671
375 Ga0451841_1237451 3300041498 Bacteria 905
376 Ga0451853_1251579 3300041512 Bacteria 887
377 Ga0439448_0059996 3300042005 Bacteria 1256
378 Ga0451577_0243577 3300042876 Bacteria 1627
379 Ga0451577_0461367 3300042876 Bacteria 1154
380 Ga0466969_0000268 3300044656 Bacteria 28572
381 Ga0466969_0002827 3300044656 Bacteria 9282
382 Ga0466969_0252341 3300044656 Bacteria 799
383 Ga0466972_0063773 3300044658 Bacteria 1764
384 Ga0466966_0016202 3300044684 Bacteria 4929
385 Ga0466966_0260398 3300044684 Bacteria 1044
386 Ga0466961_0000414 3300044693 Bacteria 27232
387 Ga0466963_0067350 3300044694 Bacteria 2403
388 Ga0453684_0010973 3300044712 Bacteria 15312
389 Ga0466971_0000843 3300044719 Bacteria 12474
390 Ga0466971_0057571 3300044719 Bacteria 1753
391 Ga0466971_0322653 3300044719 Bacteria 744
392 Ga0466968_0019898 3300044735 Bacteria 2706
393 Ga0466968_0521086 3300044735 Bacteria 594
394 Ga0466970_0114072 3300044765 Bacteria 1477
395 Ga0466970_0404314 3300044765 Bacteria 779
396 Ga0466957_0155663 3300044842 Bacteria 1481
397 Ga0466957_1339950 3300044842 Bacteria 520
398 Ga0466960_0037604 3300044901 Bacteria 2271
399 Ga0466959_0000333 3300045049 Bacteria 27831
400 Ga0466959_0213679 3300045049 Bacteria 1339
401 Ga0466958_0023521 3300045836 Bacteria 3618
402 Ga0466967_0318752 3300045976 Bacteria 1499
403 Ga0495592_0315713 3300046454 Bacteria 1011
404 Ga0495662_0518462 3300046476 Bacteria 584
405 Ga0495594_0569860 3300046499 Bacteria 642
406 Ga0495618_0506962 3300046514 Bacteria 727
407 Ga0495630_1285426 3300046517 Bacteria 552
408 Ga0495652_0879176 3300046529 Bacteria 592
409 Ga0495587_0351312 3300046536 Bacteria 822
410 Ga0495667_0034432 3300046559 Bacteria 3387
411 Ga0495667_0875187 3300046559 Bacteria 552
412 Ga0495634_0147400 3300046642 Bacteria 1490
413 Ga0495635_0251811 3300046663 Bacteria 1190
414 Ga0495657_0459484 3300046675 Bacteria 745
415 Ga0495599_0331047 3300046678 Bacteria 915
416 Ga0495600_0118502 3300046809 Bacteria 1722
417 Ga0495674_1262100 3300047319 Bacteria 556
418 Ga0496103_0826235 3300048906 Bacteria 583
419 Ga0496112_1127426 3300048915 Bacteria 702
420 Ga0496115_0315106 3300048918 Bacteria 1280
421 Ga0496119_0306064 3300048922 Bacteria 782
422 Ga0496120_0157712 3300048923 Bacteria 1134
423 Ga0496120_0410663 3300048923 Bacteria 596
424 Ga0501306_106380 3300049127 Bacteria 506
425 Ga0501313_059359 3300049529 Bacteria 540
426 Ga0501033_1132915 3300049570 Bacteria 520
427 Ga0501034_0715765 3300049571 Bacteria 899
428 Ga0501036_1697972 3300049572 Bacteria 509
429 Ga0501047_0000037 3300049581 Bacteria 189750
430 Ga0501047_0338363 3300049581 Bacteria 1343
431 Ga0501047_1315099 3300049581 Unclassified 537
432 Ga0501072_0219680 3300049588 Bacteria 1515
433 Ga0501075_1492404 3300049591 Bacteria 512
434 Ga0501243_095175 3300049675 Bacteria 595
435 Ga0501035_0865175 3300049822 Bacteria 718
436 Ga0501044_0466129 3300049823 Bacteria 1168
437 nmdc:mga0rr50_1118022_c1 3300050513 Bacteria 670
438 nmdc:mga0rr50_440214_c1 3300050513 Bacteria 1104
439 Ga0495601_0039983 3300053077 Bacteria 2937
440 Ga0495612_0563628 3300053078 Bacteria 525
441 Ga0495595_0108478 3300053084 Bacteria 1344
442 Ga0495619_0077395 3300053085 Bacteria 2234
443 Ga0495619_0744246 3300053085 Bacteria 665
444 Ga0495619_0965227 3300053085 Bacteria 571
445 Ga0500566_0488975 3300053094 Bacteria 532
446 Ga0500562_016336 3300053108 Bacteria 1908
447 Ga0500637_0412975 3300053178 Bacteria 697
448 Ga0587090_120234 3300059510 Bacteria 569
449 Ga0587092_055824 3300059512 Bacteria 727
450 Ga0587099_066151 3300059622 Bacteria 507
451 Ga0466962_0000049 3300061719 Bacteria 48219
452 2644081734 2643221613 Bacteria 4622396
453 2644665223 2643221721 Bacteria 4486924
454 2835189995 2835188231 Bacteria 3476928
455 2858870361 2858868258 Bacteria 7683772
456 2867369709 2867369537 Bacteria 6501581
457 2891329614 2891326441 Bacteria 6439512
458 2935891387 2935890801 Bacteria 4593001
459 2954701358 2954691527 Bacteria 10720516
460 2954705977 2954701450 Bacteria 10834262
461 8047718527 8047710418 Bacteria 11023148
462 Ga0436363_0396805
463 Ga0006777J48905_1074684
464 Ga0007417J51691_1182224
465 Ga0007410J51695_1044741
466 Ga0032354_1058919
467 Ga0006780_1011297
468 Ga0006780_1023150
469 Ga0058863_10014547
470 Ga0058863_10044814
471 Ga0058863_11906022
472 Ga0058863_11946208
473 Ga0058863_11970705
474 Ga0058861_10060084
475 Ga0058861_11757439
476 Ga0058860_11565486
477 Ga0058862_10040278
478 Ga0058862_10078365
479 Ga0058862_12112439
480 Ga0058862_12305169
481 Ga0058862_12453161
482 Ga0058862_12873387
483 Ga0070658_10013166
484 Ga0070658_10837212
485 Ga0070683_101973954
486 Ga0068869_100412688
487 Ga0070666_10247119
488 Ga0070680_101712160
489 Ga0070682_100000872
490 Ga0068868_101434598
491 Ga0070660_100064618
492 Ga0070660_100250616
493 Ga0070689_100589541
494 Ga0070691_10149847
495 Ga0070668_100000712
496 Ga0070668_100197694
497 Ga0070669_100289264
498 Ga0070675_101562048
499 Ga0070671_100310987
500 Ga0070671_100462658
501 Ga0070673_100650556
502 Ga0070673_102407242
503 Ga0070659_100006972
504 Ga0070714_100008500
505 Ga0070714_100234212
506 Ga0070714_101161210
507 Ga0070713_100170454
508 Ga0070713_100435619
509 Ga0070713_101307537
510 Ga0070710_10001047
511 Ga0070711_100144961
512 Ga0070708_100139840
513 Ga0070663_100779811
514 Ga0070663_101647285
515 Ga0070663_101914985
516 Ga0070662_100167118
517 Ga0070681_10074636
518 Ga0070681_10083706
519 Ga0070681_10198281
520 Ga0070681_10321831
521 Ga0070681_11442953
522 Ga0070685_10212997
523 Ga0070685_11146721
524 Ga0070706_100174009
525 Ga0070707_100383235
526 Ga0070698_100249000
527 Ga0070698_101254592
528 Ga0070698_101459883
529 Ga0070699_100107496
530 Ga0070679_100013999
531 Ga0070679_100149692
532 Ga0070684_101159456
533 Ga0070684_102013709
534 Ga0070697_100140046
535 Ga0068853_100002908
536 Ga0070686_101113262
537 Ga0070695_101142821
538 Ga0070695_101594899
539 Ga0070693_100009912
540 Ga0070665_101884751
541 Ga0068855_100068371
542 Ga0068855_102220957
543 Ga0070664_100550954
544 Ga0068857_101027156
545 Ga0068857_101306028
546 Ga0068856_102456887
547 Ga0068856_102563032
548 Ga0068859_101995997
549 Ga0068864_101143030
550 Ga0068861_100152920
551 Ga0068863_100288639
552 Ga0068863_101836736
553 Ga0068858_100080137
554 Ga0068860_100076344
555 Ga0068862_100014112
556 Ga0068862_100255629
557 Ga0081455_10630305
558 Ga0070717_10163366
559 Ga0070717_10281284
560 Ga0070712_100014232
561 Ga0075367_10211486
562 Ga0068871_102233168
563 Ga0075434_102110852
564 Ga0075436_101006099
565 Ga0075436_101232048
566 Ga0097620_101995924
567 Ga0075435_101794491
568 Ga0099794_10604416
569 Ga0099795_10240997
570 Ga0105240_10203788
571 Ga0105240_10647228
572 Ga0105240_10819923
573 Ga0105240_11489229
574 Ga0105240_11698509
575 Ga0105247_10545095
576 Ga0105243_11419895
577 Ga0105243_11565626
578 Ga0105241_10107731
579 Ga0105241_11245948
580 Ga0105248_10596839
581 Ga0105238_10519803
582 Ga0099796_10144194
583 Ga0105239_10298464
584 Ga0105239_11710754
585 Ga0105246_10311684
586 Ga0105246_11194744
587 Ga0154010_141552
588 Ga0157373_10004253
589 Ga0157370_10008512
590 Ga0157370_11546563
591 Ga0157369_11916043
592 Ga0157374_10546698
593 Ga0157372_10004024
594 Ga0157372_11267628
595 Ga0157375_10410719
596 Ga0157375_12031519
597 Ga0163163_10216514
598 Ga0157380_11592243
599 Ga0157380_11876793
600 Ga0157379_10300689
601 Ga0157379_12440845
602 Ga0157376_10643541
603 Ga0184597_124399
604 Ga0184601_139311
605 Ga0184599_130980
606 Ga0184599_140892
607 Ga0184599_153412
608 Ga0184600_112617
609 Ga0197907_10102765
610 Ga0197907_10282638
611 Ga0197907_10421753
612 Ga0197907_10509266
613 Ga0197907_10817861
614 Ga0197907_11029206
615 Ga0206356_10992741
616 Ga0206349_1271126
617 Ga0206349_1642906
618 Ga0206355_1016581
619 Ga0206355_1184942
620 Ga0206355_1246895
621 Ga0206355_1313775
622 Ga0206355_1361710
623 Ga0206355_1579859
624 Ga0206355_1599485
625 Ga0206351_10847115
626 Ga0206352_10449183
627 Ga0206352_10490373
628 Ga0206352_10779299
629 Ga0206350_10161280
630 Ga0206354_11147033
631 Ga0206354_11597364
632 Ga0206354_11609644
633 Ga0206354_11686775
634 Ga0206353_10256396
635 Ga0206353_10376942
636 Ga0206353_10841938
637 Ga0206353_11866163
638 Ga0154015_1278940
639 Ga0213873_10018534
640 Ga0213873_10057852
641 Ga0213873_10325340
642 Ga0213872_10029786
643 Ga0213872_10391168
644 Ga0213875_10000462
645 Ga0213875_10000552
646 Ga0213875_10000871
647 Ga0213875_10001270
648 Ga0213875_10023746
649 Ga0213875_10071940
650 Ga0213875_10115919
651 Ga0213871_10032548
652 Ga0213871_10185419
653 Ga0224712_10036470
654 Ga0224712_10042293
655 Ga0224712_10237721
656 Ga0224712_10266527
657 Ga0224712_10370361
658 Ga0207682_10563677
659 Ga0207692_10001188
660 Ga0207692_10042964
661 Ga0207710_10678891
662 Ga0207688_10167577
663 Ga0207680_10163232
664 Ga0207685_10587274
665 Ga0207699_10551467
666 Ga0207705_10187922
667 Ga0207705_10452459
668 Ga0207684_11555578
669 Ga0207707_10027776
670 Ga0207707_10070281
671 Ga0207707_11207616
672 Ga0207695_10140837
673 Ga0207695_11195516
674 Ga0207695_11272750
675 Ga0207695_11473161
676 Ga0207693_10169245
677 Ga0207660_10025900
678 Ga0207660_11530283
679 Ga0207657_10068560
680 Ga0207657_10587950
681 Ga0207649_10889445
682 Ga0207652_10032528
683 Ga0207652_10639427
684 Ga0207652_10640581
685 Ga0207681_10371992
686 Ga0207659_10675421
687 Ga0207659_11771820
688 Ga0207700_10418873
689 Ga0207700_10648409
690 Ga0207664_10009771
691 Ga0207664_10748798
692 Ga0207664_10906393
693 Ga0207690_10108538
694 Ga0207706_10130955
695 Ga0207670_11184948
696 Ga0207704_10799575
697 Ga0207711_10889924
698 Ga0207689_10363585
699 Ga0207661_11430141
700 Ga0207667_10153756
701 Ga0207651_12151169
702 Ga0207712_11518107
703 Ga0207668_10001866
704 Ga0207668_10079770
705 Ga0207668_10785574
706 Ga0207658_10301746
707 Ga0207677_10891755
708 Ga0207703_10361874
709 Ga0207703_11686467
710 Ga0207639_10006204
711 Ga0207678_10300423
712 Ga0207678_10365246
713 Ga0207641_10257611
714 Ga0207641_10532298
715 Ga0207641_11693203
716 Ga0207674_10166017
717 Ga0207674_10949668
718 Ga0207675_100576191
719 Ga0207675_101895387
720 Ga0209967_1026556
721 Ga0268266_10211947
722 Ga0268265_10073721
723 Ga0268265_10669844
724 Ga0265334_10179004
725 Ga0307517_10155294
726 Ga0265338_10033441
727 Ga0311001_1031577
728 Ga0307511_10052372
729 Ga0307512_10123106
730 Ga0316177_1179474
731 Ga0316176_1078293
732 Ga0314311_1010152
733 Ga0316180_1175689
734 Ga0316183_1146651
735 Ga0316181_1160906
736 Ga0316182_1154208
737 Ga0265775_102622
738 Ga0265766_1009531
739 Ga0265777_105141
740 Ga0265777_118742
741 Ga0265776_108459
742 Ga0265779_104055
743 Ga0265779_107267
744 Ga0265779_114026
745 Ga0265327_10017555
746 Ga0307513_10226641
747 Ga0307509_10105157
748 Ga0307408_102246581
749 Ga0265313_10338498
750 Ga0307508_10063977
751 Ga0307508_10074854
752 Ga0307508_10304628
753 Ga0316576_10611539
754 Ga0307405_10208879
755 Ga0307413_10825886
756 Ga0307412_10744987
757 Ga0307409_102410528
758 Ga0307416_103298844
759 Ga0307416_103841459
760 Ga0307411_10194588
761 Ga0307411_11485622
762 Ga0316053_108543
763 Ga0307415_100106010
764 Ga0316583_10010464
765 Ga0316585_10121752
766 Ga0316593_10160204
767 Ga0316593_10276554
768 Ga0307507_10000158
769 Ga0307507_10061783
770 Ga0307507_10234721
771 Ga0307510_10102615
772 Ga0316592_1171575
773 Ga0316586_1037375
774 Ga0316586_1078891
775 Ga0316587_1049784
776 Ga0316596_1107199
777 Ga0373934_0518520
778 Ga0373953_0056670
779 Ga0373954_0020969
780 Ga0373956_0109011
781 Ga0373955_0027502
782 Ga0316574_0090540
783 Ga0373931_0874896
784 Ga0373935_0013197
785 Ga0373933_0823086
786 Ga0373947_0040294
787 Ga0373937_0005300
788 Ga0373937_0059372
789 Ga0373937_0435065
790 Ga0265778_023552
791 Ga0265778_030571
792 Ga0265778_043009
793 Ga0265778_063364
794 Ga0265778_067606
795 Ga0316582_0318259
796 Ga0316584_0235532
797 Ga0373925_1754983
798 Ga0395900_0597229
799 Ga0395905_0068733
800 Ga0436364_0055069
801 Ga0436364_0440208
802 Ga0436364_0446735
803 Ga0436364_1284200
804 Ga0436364_1385478
805 Ga0436365_0990657
806 Ga0436360_0140532
807 Ga0436360_0181891
808 Ga0436360_0217582
809 Ga0436360_0301660
810 Ga0436360_0517661
811 Ga0436360_0693057
812 Ga0436360_0765080
813 Ga0436360_0842629
814 Ga0436361_0020440
815 Ga0436361_0036926
816 Ga0436361_0122066
817 Ga0436361_0204595
818 Ga0436361_0658394
819 Ga0436361_0700209
820 Ga0436361_1149293
821 Ga0436361_1222434
822 Ga0436363_0076716
823 Ga0436363_1527224
824 Ga0436362_0436888
825 Ga0436362_0584849
826 Ga0436362_0680931
827 Ga0436362_0758936
828 Ga0436362_1017034
829 Ga0451791_1517526
830 Ga0451797_0920157
831 Ga0451802_1558625
832 Ga0451805_065026
833 Ga0451804_0670496
834 Ga0451807_0984760
835 Ga0451837_1427384
836 Ga0451841_1237451
837 Ga0451853_1251579
838 Ga0439448_0059996
839 Ga0451577_0243577
840 Ga0451577_0461367
841 Ga0466969_0000268
842 Ga0466969_0002827
843 Ga0466969_0252341
844 Ga0466972_0063773
845 Ga0466966_0016202
846 Ga0466966_0260398
847 Ga0466961_0000414
848 Ga0466963_0067350
849 Ga0453684_0010973
850 Ga0466971_0000843
851 Ga0466971_0057571
852 Ga0466971_0322653
853 Ga0466968_0019898
854 Ga0466968_0521086
855 Ga0466970_0114072
856 Ga0466970_0404314
857 Ga0466957_0155663
858 Ga0466957_1339950
859 Ga0466960_0037604
860 Ga0466959_0000333
861 Ga0466959_0213679
862 Ga0466958_0023521
863 Ga0466967_0318752
864 Ga0495592_0315713
865 Ga0495662_0518462
866 Ga0495594_0569860
867 Ga0495618_0506962
868 Ga0495630_1285426
869 Ga0495652_0879176
870 Ga0495587_0351312
871 Ga0495667_0034432
872 Ga0495667_0875187
873 Ga0495634_0147400
874 Ga0495635_0251811
875 Ga0495657_0459484
876 Ga0495599_0331047
877 Ga0495600_0118502
878 Ga0495674_1262100
879 Ga0496103_0826235
880 Ga0496112_1127426
881 Ga0496115_0315106
882 Ga0496119_0306064
883 Ga0496120_0157712
884 Ga0496120_0410663
885 Ga0501306_106380
886 Ga0501313_059359
887 Ga0501033_1132915
888 Ga0501034_0715765
889 Ga0501036_1697972
890 Ga0501047_0000037
891 Ga0501047_0338363
892 Ga0501047_1315099
893 Ga0501072_0219680
894 Ga0501075_1492404
895 Ga0501243_095175
896 Ga0501035_0865175
897 Ga0501044_0466129
898 nmdc:mga0rr50_1118022_c1
899 nmdc:mga0rr50_440214_c1
900 Ga0495601_0039983
901 Ga0495612_0563628
902 Ga0495595_0108478
903 Ga0495619_0077395
904 Ga0495619_0744246
905 Ga0495619_0965227
906 Ga0500566_0488975
907 Ga0500562_016336
908 Ga0500637_0412975
909 Ga0587090_120234
910 Ga0587092_055824
911 Ga0587099_066151
912 Ga0466962_0000049
913 2644081734
914 2644665223
915 2835189995
916 2858870361
917 2867369709
918 2891329614
919 2935891387
920 2954701358
921 2954705977
922 8047718527

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00313

CSD

'Cold-shock' DNA-binding domain

10

75

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1hza-assembly1.cif.gz_B bacillus caldolyticus cold-shock protein mutants to study determinants of protein stability 0.9054 1 68
1mjc-assembly1.cif.gz_A crystal structure of cspa, the major cold shock protein of escherichia coli 0.9052 2 68
8h1i-assembly1.cif.gz_B crystal structure of plygrcs, a bacteriophage endolysin in complex with cold shock protein c 0.9006 2 68
1c9o-assembly1.cif.gz_B crystal structure analysis of the bacillus caldolyticus cold shock protein bc-csp 0.8986 1 68
1hz9-assembly1.cif.gz_B bacillus caldolyticus cold-shock protein mutants to study determinants of protein stability 0.8966 1 68
ID Description Score Start End Superfamily
af_Q94C69_1_75_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9189 2 65 2.40.50.140
af_P0A976_2_68_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9035 2 65 2.40.50.140
af_I1LPN7_1_82_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.903 2 65 2.40.50.140
af_Q9VRN5_36_116_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8773 2 68 2.40.50.140
af_P92186_48_133_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8747 2 68 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A7C9GQZ6-F1-model_v4 Cold-shock protein 1.001 2 68 GO:0003676
GO:0005829
AF-A0A2W4SJ59-F1-model_v4 Cold-shock protein 0.9978 2 68 GO:0003676
GO:0005829
AF-A0A1S1P2L9-F1-model_v4 Cold-shock protein 0.9973 1 67 GO:0003676
GO:0005829
AF-A0A7H0LHR5-F1-model_v4 Cold-shock protein 0.9958 2 68 GO:0003676
GO:0005829
AF-Q1NG42-F1-model_v4 Cold shock protein 0.9956 2 68 GO:0003676
GO:0005829

Map