|
Taxon Oid |
3300030745
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Wheat crown rot disease influences the structure and diversity of wheat-associated microbiome |
| Genome Name Sample Name |
Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 |
| Sequencing Center |
University of Western Sydney |
| Img Genome Id |
3300030745 |
| Ncbi Phylum |
Host-associated |
| Ncbi Class |
Plants |
| Ncbi Order |
Roots |
| Ncbi Family |
Rhizosphere |
| Ncbi Genus |
Soil |
| Ncbi Species |
Wheat crown rot disease influences the structure and diversity of wheat-associated microbiome |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.4.16.5 |
| Img Submission Id |
200515 |
|
Gold Analysis Project Id
|
Ga0316182
|
| Gold Analysis Project Type |
Metagenome Analysis |
|
Gold Sequencing Project Id
|
Gp0326255
|
|
Gold Study Id
|
Gs0135228
|
| Add Date |
10/21/2018 00:00:00 |
| Assembly Method |
MEGAHIT v. 1.0 |
| Comments |
released by JGI data releasing policy |
| Has Coverage |
False |
| Public Release Date |
03/04/2022 00:00:00 |
| Submission Type |
Primary |
| In File |
Yes |
| Submitter Name |
hongwei liu |
| Rnd Project |
True |
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
hongwei liu |
| Contact Email |
[email protected] |
| Contact Name |
hongwei liu |
| Is Published |
False |
| Sequencing Method |
Illumina HiSeq |
| Sequencing Quality |
Level 1: Standard Draft |
| Sequencing Strategy |
Metagenome |
| Ecosystem |
Host-associated |
| Ecosystem Category |
Plants |
| Ecosystem Subtype |
Rhizosphere |
| Ecosystem Type |
Roots |
| Specific Ecosystem |
Soil |
| Cultured |
False |
| Geographic Location |
Wellcamp field site |
| Habitat |
Rhizosphere soils |
| Isolation |
Wellcamp field site |
| Latitude |
-27.5652 |
| Longitude |
151.864 |
| Sample Collection Date |
2015/9/26 |
| Host Name |
Triticum aestivum |
| Sample Body Site |
Plant-root |
| Genome Size Assembled |
251937677 |
| Gene Count Assembled |
590524 |