F392848

General Info

Members Datasets Scaffolds Average Seq Length
295 200 590 331

Family's Representative Sequence

Representative Sequence 3300048913|Ga0496110_0415907|Ga0496110_0415907_31_1170
Length 379
Sequence MEQPEPVGPTPHRPYNSATNHQLTERNRPVAENVIIIGSGPAGWSAAIYAARAELRPLVFEGAITEENRLAGTLPLGQLALTTEVENYAGFPSGDLEHFLKTAIDGERSQYMNIHKGKHAVTGPELMELMRQQASNFGTRIITDDVVSVDLKSRPFVVKTLEGNTHEAHALIIATGAKANYLGLPSEDAFKNRGVSACAVCDGALPRFRNKPLIVVGGGDSAVEEATYLTKYASKVHMVVRRDKLRASMIMQERAIAHPKIQLEWNHTIDEVIGTDKEGVTNVRLASTLGEGKRELPASGVFLAIGHTPNTDFLKGQIEINEKGYVRWTKPHRTETSVEGVFAAGDVADDYYRQAITSAGTGCMAALDAERWLSAKGIH

Samples

Sample ID Description Type Environment
1 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
2 3300003163 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003300 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_1 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003308 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003544 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
6 3300003574 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
7 3300003577 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
8 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
83 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
84 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
85 3300029276 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B1.ctcc.R1 Metatranscriptome Rhizosphere
86 3300029277 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B3.ctcc.R1 Metatranscriptome Rhizosphere
87 3300029285 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B3.stno.R1 Metatranscriptome Rhizosphere
88 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
89 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
90 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
91 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
98 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
99 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
100 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
101 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
102 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
103 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
104 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
105 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
106 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
107 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
108 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
109 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
110 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
111 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
116 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
117 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
118 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
119 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
120 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
121 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
122 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
123 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
126 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
127 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
128 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
129 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
130 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
131 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
132 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
133 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
134 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
135 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
136 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
137 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
138 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
139 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
140 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
143 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
144 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
145 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
146 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
147 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
148 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
149 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
163 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
164 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
165 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
166 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
167 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
168 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
169 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
170 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
171 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
172 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
177 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
178 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
179 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
182 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
185 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
186 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
187 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
188 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
189 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
190 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
191 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
192 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
193 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
194 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
195 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
196 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
197 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
198 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
199 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified
200 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.25
Metatranscriptomes 4.07
Isolates 0.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.1
Nodule 0
Rhizoplane 1.36
Rhizosphere 88.14
Stem 0
Stem Tuber 0
Unclassified 1.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496110_0415907 3300048913 Bacteria 1226
2 Ga0006759J45824_1033553 3300003163 Eukaryota 1775
3 Ga0006758J48902_1021415 3300003300 Eukaryota 1796
4 Ga0006777J48905_1029813 3300003308 Eukaryota 1818
5 Ga0006777J48905_1032441 3300003308 Eukaryota 1773
6 Ga0007417J51691_1024779 3300003544 Eukaryota 1784
7 Ga0007410J51695_1015942 3300003574 Eukaryota 1770
8 Ga0007416J51690_1028577 3300003577 Eukaryota 1750
9 Ga0032354_1041167 3300003693 Eukaryota 1750
10 Ga0065707_10171683 3300005295 Bacteria 1480
11 Ga0070683_100263100 3300005329 Bacteria 1641
12 Ga0068869_100017147 3300005334 Bacteria 4902
13 Ga0068869_100093798 3300005334 Bacteria 2262
14 Ga0070689_100005293 3300005340 Bacteria 8792
15 Ga0070689_100049660 3300005340 Bacteria 3240
16 Ga0070689_100054794 3300005340 Bacteria 3088
17 Ga0070687_100104831 3300005343 Bacteria 1590
18 Ga0070692_10115645 3300005345 Bacteria 1489
19 Ga0070675_100110289 3300005354 Bacteria 2327
20 Ga0070671_100170105 3300005355 Bacteria 1843
21 Ga0070674_100011878 3300005356 Bacteria 5323
22 Ga0070673_100322539 3300005364 Bacteria 1365
23 Ga0070714_100007907 3300005435 Bacteria 8283
24 Ga0070694_100134491 3300005444 Bacteria 1790
25 Ga0070662_100198308 3300005457 Bacteria 1591
26 Ga0070706_100068478 3300005467 Bacteria 3282
27 Ga0070706_100130575 3300005467 Bacteria 2344
28 Ga0070707_100136745 3300005468 Bacteria 2384
29 Ga0070698_100015081 3300005471 Bacteria 8170
30 Ga0070698_100047132 3300005471 Bacteria 4406
31 Ga0070698_100121162 3300005471 Bacteria 2576
32 Ga0070698_100364891 3300005471 Bacteria 1376
33 Ga0070699_100145585 3300005518 Bacteria 2093
34 Ga0070697_100172868 3300005536 Bacteria 1829
35 Ga0068853_100026152 3300005539 Bacteria 4900
36 Ga0070665_100000046 3300005548 Bacteria 271885
37 Ga0068855_100199252 3300005563 Bacteria 2255
38 Ga0068857_100020392 3300005577 Bacteria 5829
39 Ga0068857_100475957 3300005577 Bacteria 1170
40 Ga0068861_100002307 3300005719 Bacteria 12388
41 Ga0068870_10155321 3300005840 Bacteria 1352
42 Ga0068858_100102096 3300005842 Bacteria 2675
43 Ga0068860_100038996 3300005843 Bacteria 4545
44 Ga0068860_100216217 3300005843 Bacteria 1860
45 Ga0068860_100647492 3300005843 Bacteria 1064
46 Ga0081455_10095125 3300005937 Bacteria 2405
47 Ga0070717_10006519 3300006028 Bacteria 8589
48 Ga0070717_10098219 3300006028 Bacteria 2482
49 Ga0070717_10124355 3300006028 Bacteria 2213
50 Ga0075428_100062843 3300006844 Bacteria 4065
51 Ga0075430_100085494 3300006846 Bacteria 2641
52 Ga0075430_100333174 3300006846 Bacteria 1254
53 Ga0075431_100005948 3300006847 Bacteria 12074
54 Ga0075429_100009294 3300006880 Bacteria 8532
55 Ga0075429_100021210 3300006880 Bacteria 5632
56 Ga0075429_100050777 3300006880 Bacteria 3608
57 Ga0068865_100026181 3300006881 Bacteria 3844
58 Ga0105240_10014059 3300009093 Bacteria 10944
59 Ga0105240_10487515 3300009093 Bacteria 1373
60 Ga0111539_10001711 3300009094 Bacteria 29199
61 Ga0111539_10347376 3300009094 Bacteria 1727
62 Ga0105245_10010811 3300009098 Bacteria 7942
63 Ga0114129_10009097 3300009147 Bacteria 14156
64 Ga0114129_10664788 3300009147 Bacteria 1343
65 Ga0105241_10295637 3300009174 Bacteria 1388
66 Ga0105242_10675662 3300009176 Bacteria 1007
67 Ga0105237_10049008 3300009545 Bacteria 4246
68 Ga0105238_10000174 3300009551 Bacteria 70407
69 Ga0105249_10151353 3300009553 Bacteria 2234
70 Ga0105249_10221966 3300009553 Bacteria 1860
71 Ga0157370_10047744 3300013104 Bacteria 4103
72 Ga0157369_10047865 3300013105 Bacteria 4641
73 Ga0157369_10131082 3300013105 Eukaryota 2657
74 Ga0157374_10162091 3300013296 Unclassified 2178
75 Ga0157378_10164430 3300013297 Bacteria 2078
76 Ga0157372_10045943 3300013307 Bacteria 4846
77 Ga0157372_10135493 3300013307 Bacteria 2835
78 Ga0157375_10452324 3300013308 Bacteria 1450
79 Ga0157379_10110326 3300014968 Bacteria 2471
80 Ga0157379_10221817 3300014968 Bacteria 1713
81 Ga0157379_10231870 3300014968 Bacteria 1673
82 Ga0207643_10154899 3300025908 Bacteria 1376
83 Ga0207684_10058118 3300025910 Bacteria 3282
84 Ga0207684_10069025 3300025910 Bacteria 3004
85 Ga0207707_10264894 3300025912 Bacteria 1490
86 Ga0207695_10000126 3300025913 Bacteria 228511
87 Ga0207695_10299710 3300025913 Bacteria 1499
88 Ga0207652_10172682 3300025921 Bacteria 1940
89 Ga0207646_10091676 3300025922 Bacteria 2720
90 Ga0207659_10146460 3300025926 Bacteria 1839
91 Ga0207659_10169401 3300025926 Bacteria 1722
92 Ga0207687_10034280 3300025927 Bacteria 3446
93 Ga0207687_10157922 3300025927 Bacteria 1737
94 Ga0207664_10030197 3300025929 Bacteria 4138
95 Ga0207709_10098084 3300025935 Bacteria 1931
96 Ga0207670_10068469 3300025936 Bacteria 2445
97 Ga0207670_10084095 3300025936 Bacteria 2233
98 Ga0207669_10006421 3300025937 Bacteria 5373
99 Ga0207704_10043070 3300025938 Bacteria 2662
100 Ga0207691_10013125 3300025940 Bacteria 7930
101 Ga0207689_10050435 3300025942 Bacteria 3432
102 Ga0207689_10130108 3300025942 Bacteria 2071
103 Ga0207667_10171382 3300025949 Bacteria 2231
104 Ga0207667_10230614 3300025949 Bacteria 1896
105 Ga0207651_10117091 3300025960 Bacteria 2013
106 Ga0207674_10002254 3300026116 Bacteria 24437
107 Ga0207674_10535601 3300026116 Bacteria 1131
108 Ga0207675_100024652 3300026118 Bacteria 5593
109 Ga0207675_100104485 3300026118 Bacteria 2670
110 Ga0209966_1000595 3300027695 Bacteria 8680
111 Ga0209974_10034406 3300027876 Bacteria 1683
112 Ga0207428_10021893 3300027907 Bacteria 5403
113 Ga0268266_10000170 3300028379 Bacteria 119083
114 Ga0268266_10086618 3300028379 Bacteria 2739
115 Ga0268264_10175484 3300028381 Bacteria 1942
116 Ga0268264_10444951 3300028381 Bacteria 1254
117 Ga0265323_10003124 3300028653 Bacteria 7372
118 Ga0265323_10038743 3300028653 Bacteria 1741
119 Ga0307517_10025200 3300028786 Bacteria 7288
120 Ga0265338_10009374 3300028800 Bacteria 11690
121 Ga0265338_10015586 3300028800 Bacteria 8331
122 Ga0265338_10086508 3300028800 Bacteria 2608
123 Ga0265338_10094139 3300028800 Bacteria 2465
124 Ga0311004_157708 3300029276 Eukaryota 1433
125 Ga0311001_1002405 3300029277 Eukaryota 1981
126 Ga0310981_1097038 3300029285 Eukaryota 1771
127 Ga0265324_10000072 3300029957 Bacteria 79932
128 Ga0265329_10029142 3300031242 Bacteria 1806
129 Ga0265339_10000578 3300031249 Bacteria 28567
130 Ga0265331_10000402 3300031250 Bacteria 44497
131 Ga0265327_10003499 3300031251 Bacteria 14924
132 Ga0265316_10092034 3300031344 Bacteria 2312
133 Ga0307513_10010919 3300031456 Bacteria 11341
134 Ga0307513_10185920 3300031456 Bacteria 1935
135 Ga0307509_10000280 3300031507 Bacteria 84178
136 Ga0307509_10113237 3300031507 Bacteria 2711
137 Ga0307408_100001118 3300031548 Bacteria 20436
138 Ga0307408_100058797 3300031548 Bacteria 2796
139 Ga0265313_10000598 3300031595 Bacteria 37449
140 Ga0307508_10050152 3300031616 Bacteria 3715
141 Ga0307508_10226033 3300031616 Bacteria 1471
142 Ga0316575_10012458 3300031665 Bacteria 3164
143 Ga0316579_10005899 3300031691 Bacteria 4968
144 Ga0265314_10000651 3300031711 Bacteria 42500
145 Ga0265342_10012482 3300031712 Bacteria 5752
146 Ga0316576_10010526 3300031727 Bacteria 6014
147 Ga0316576_10036056 3300031727 Bacteria 3534
148 Ga0316576_10118191 3300031727 Bacteria 1990
149 Ga0316576_10140907 3300031727 Bacteria 1815
150 Ga0316578_10022166 3300031728 Bacteria 3536
151 Ga0316578_10151130 3300031728 Bacteria 1399
152 Ga0307516_10058007 3300031730 Bacteria 3770
153 Ga0307405_10099997 3300031731 Bacteria 1942
154 Ga0316577_10010979 3300031733 Bacteria 4900
155 Ga0307413_10002381 3300031824 Bacteria 7633
156 Ga0307413_10018358 3300031824 Bacteria 3668
157 Ga0307413_10368275 3300031824 Bacteria 1115
158 Ga0307410_10006094 3300031852 Bacteria 6467
159 Ga0307410_10014718 3300031852 Bacteria 4615
160 Ga0307410_10047842 3300031852 Bacteria 2861
161 Ga0307410_10048051 3300031852 Bacteria 2856
162 Ga0307410_10069801 3300031852 Bacteria 2431
163 Ga0307410_10083282 3300031852 Bacteria 2252
164 Ga0307406_10007142 3300031901 Bacteria 6186
165 Ga0307406_10035918 3300031901 Bacteria 3051
166 Ga0307406_10132058 3300031901 Bacteria 1754
167 Ga0307407_10005499 3300031903 Bacteria 5505
168 Ga0307409_100012464 3300031995 Bacteria 5418
169 Ga0307409_100029795 3300031995 Bacteria 3912
170 Ga0307409_100105001 3300031995 Bacteria 2354
171 Ga0307409_100128902 3300031995 Bacteria 2158
172 Ga0307409_100169955 3300031995 Bacteria 1918
173 Ga0307416_100009831 3300032002 Bacteria 6288
174 Ga0307416_100562476 3300032002 Bacteria 1215
175 Ga0307414_10003538 3300032004 Bacteria 8358
176 Ga0307414_10196017 3300032004 Bacteria 1639
177 Ga0307414_10239756 3300032004 Bacteria 1500
178 Ga0307411_10038238 3300032005 Bacteria 3024
179 Ga0307411_10039119 3300032005 Bacteria 2998
180 Ga0307411_10053768 3300032005 Bacteria 2640
181 Ga0307415_100019459 3300032126 Bacteria 4122
182 Ga0307415_100025818 3300032126 Bacteria 3695
183 Ga0307415_100181693 3300032126 Bacteria 1651
184 Ga0307507_10048846 3300033179 Bacteria 4110
185 Ga0316596_1037181 3300033541 Bacteria 1274
186 Ga0373941_0013728 3300035115 Bacteria 2148
187 Ga0373955_0190661 3300035172 Bacteria 1219
188 Ga0373961_0000104 3300035241 Bacteria 44660
189 Ga0316574_0084406 3300035398 Bacteria 2020
190 Ga0373927_0040144 3300035695 Bacteria 3037
191 Ga0373937_0276050 3300036401 Bacteria 1587
192 Ga0316582_0025779 3300036647 Bacteria 3533
193 Ga0316584_0070895 3300036712 Bacteria 2611
194 Ga0395899_0012436 3300037312 Bacteria 6521
195 Ga0395898_0035837 3300037466 Bacteria 4931
196 Ga0395901_0048621 3300038443 Bacteria 4405
197 Ga0395901_0169348 3300038443 Bacteria 2292
198 Ga0395901_0190494 3300038443 Bacteria 2151
199 Ga0436365_0178624 3300039437 Bacteria 1244
200 Ga0436365_1054547 3300039437 Bacteria 5420
201 Ga0451577_0000016 3300042876 Bacteria 531002
202 Ga0466972_0045746 3300044658 Bacteria 2120
203 Ga0466966_0032551 3300044684 Bacteria 3378
204 Ga0453684_0000514 3300044712 Bacteria 149480
205 Ga0466970_0002725 3300044765 Bacteria 8537
206 Ga0466960_0100633 3300044901 Bacteria 1488
207 Ga0451576_0153058 3300045051 Bacteria 2405
208 Ga0466967_0098557 3300045976 Bacteria 2669
209 Ga0466967_0468624 3300045976 Bacteria 1233
210 Ga0495639_0055440 3300046475 Bacteria 1808
211 Ga0495608_0008615 3300046511 Bacteria 7142
212 Ga0495628_0132835 3300046516 Bacteria 1903
213 Ga0495630_0008363 3300046517 Bacteria 7427
214 Ga0495630_0238589 3300046517 Bacteria 1389
215 Ga0495587_0098802 3300046536 Bacteria 1682
216 Ga0495599_0116805 3300046678 Bacteria 1659
217 Ga0495604_0097201 3300047317 Bacteria 2172
218 Ga0495674_0007526 3300047319 Bacteria 10400
219 Ga0495675_0062368 3300047444 Bacteria 2360
220 Ga0495684_0009029 3300047471 Bacteria 7697
221 Ga0495686_0003386 3300047472 Bacteria 13880
222 Ga0496104_0252950 3300048907 Bacteria 1675
223 Ga0496108_0185310 3300048911 Bacteria 1803
224 Ga0496110_0343385 3300048913 Bacteria 1360
225 Ga0501033_0071224 3300049570 Bacteria 2554
226 Ga0501034_0000457 3300049571 Bacteria 67431
227 Ga0501034_0003494 3300049571 Bacteria 17848
228 Ga0501034_0009957 3300049571 Bacteria 9935
229 Ga0501036_0209439 3300049572 Bacteria 1638
230 Ga0501037_0012163 3300049573 Bacteria 6334
231 Ga0501038_0001033 3300049574 Bacteria 25131
232 Ga0501043_0054083 3300049579 Bacteria 3153
233 Ga0501043_0290961 3300049579 Bacteria 1250
234 Ga0501047_0046834 3300049581 Bacteria 4178
235 Ga0501047_0419894 3300049581 Bacteria 1169
236 Ga0501070_0004109 3300049586 Bacteria 12516
237 Ga0501070_0130810 3300049586 Bacteria 2073
238 Ga0501070_0278688 3300049586 Bacteria 1364
239 Ga0501072_0222786 3300049588 Bacteria 1503
240 Ga0501073_0018595 3300049589 Bacteria 5022
241 Ga0501202_001251 3300049652 Bacteria 4017
242 Ga0501227_000670 3300049665 Bacteria 7493
243 Ga0501227_042482 3300049665 Bacteria 1127
244 Ga0501230_003838 3300049667 Bacteria 2025
245 Ga0501230_015182 3300049667 Bacteria 1275
246 Ga0501233_009499 3300049668 Bacteria 1897
247 Ga0501235_006417 3300049669 Bacteria 2561
248 Ga0501259_003006 3300049688 Bacteria 2699
249 Ga0501225_0003483 3300049705 Bacteria 4754
250 Ga0501225_0005893 3300049705 Bacteria 3586
251 Ga0501229_001533 3300049706 Bacteria 2703
252 Ga0501080_0011789 3300049742 Bacteria 8010
253 Ga0501080_0106621 3300049742 Bacteria 2597
254 Ga0501083_0039473 3300049744 Bacteria 3206
255 Ga0501083_0058405 3300049744 Bacteria 2581
256 Ga0501035_0118154 3300049822 Bacteria 2320
257 Ga0501044_0026550 3300049823 Bacteria 6130
258 Ga0501045_0299037 3300049824 Bacteria 1198
259 nmdc:mga05p37_555005_c1 3300050507 Bacteria 1306
260 nmdc:mga05p37_717_c1 3300050507 Bacteria 36721
261 nmdc:mga09592_19242_c1 3300050508 Bacteria 5605
262 nmdc:mga09592_234285_c1 3300050508 Bacteria 1591
263 nmdc:mga0qj67_101634_c1 3300050509 Bacteria 2318
264 nmdc:mga0qj67_142264_c1 3300050509 Bacteria 1945
265 nmdc:mga0qj67_168822_c1 3300050509 Bacteria 1776
266 nmdc:mga0qj67_311456_c1 3300050509 Bacteria 1275
267 nmdc:mga06r32_154066_c1 3300050510 Bacteria 2278
268 nmdc:mga08y16_1269_c1 3300050511 Bacteria 25037
269 nmdc:mga08y16_376776_c1 3300050511 Bacteria 1455
270 nmdc:mga0a205_332464_c1 3300050515 Unclassified 1389
271 Ga0495601_0005806 3300053077 Bacteria 7196
272 Ga0495595_0108499 3300053084 Bacteria 1344
273 Ga0495595_0160258 3300053084 Bacteria 1110
274 Ga0495619_0010194 3300053085 Bacteria 5919
275 Ga0500578_0084258 3300053086 Bacteria 2020
276 Ga0500583_0028194 3300053092 Bacteria 2433
277 Ga0500566_0004894 3300053094 Bacteria 7975
278 Ga0500566_0006652 3300053094 Bacteria 6846
279 Ga0500566_0033357 3300053094 Unclassified 3001
280 Ga0500566_0112709 3300053094 Bacteria 1477
281 Ga0500640_027212 3300053095 Bacteria 2494
282 Ga0500641_0022448 3300053096 Bacteria 2417
283 Ga0500562_006291 3300053108 Bacteria 2996
284 Ga0500595_000030 3300053119 Bacteria 117206
285 Ga0500595_000239 3300053119 Bacteria 37131
286 Ga0500597_002580 3300053120 Bacteria 5082
287 Ga0500614_003756 3300053123 Bacteria 3250
288 Ga0500642_0095506 3300053130 Bacteria 1377
289 Ga0500658_0060912 3300053134 Bacteria 1569
290 Ga0500603_007258 3300053150 Bacteria 2430
291 Ga0500616_0000732 3300053153 Bacteria 37983
292 Ga0500622_0141348 3300053156 Bacteria 1147
293 Ga0501082_0046899 3300060353 Bacteria 3724
294 2673161720 2671180531 Bacteria 9045424
295 2687239537 2684623219 Bacteria 8442773
296 Ga0496110_0415907
297 Ga0006759J45824_1033553
298 Ga0006758J48902_1021415
299 Ga0006777J48905_1029813
300 Ga0006777J48905_1032441
301 Ga0007417J51691_1024779
302 Ga0007410J51695_1015942
303 Ga0007416J51690_1028577
304 Ga0032354_1041167
305 Ga0065707_10171683
306 Ga0070683_100263100
307 Ga0068869_100017147
308 Ga0068869_100093798
309 Ga0070689_100005293
310 Ga0070689_100049660
311 Ga0070689_100054794
312 Ga0070687_100104831
313 Ga0070692_10115645
314 Ga0070675_100110289
315 Ga0070671_100170105
316 Ga0070674_100011878
317 Ga0070673_100322539
318 Ga0070714_100007907
319 Ga0070694_100134491
320 Ga0070662_100198308
321 Ga0070706_100068478
322 Ga0070706_100130575
323 Ga0070707_100136745
324 Ga0070698_100015081
325 Ga0070698_100047132
326 Ga0070698_100121162
327 Ga0070698_100364891
328 Ga0070699_100145585
329 Ga0070697_100172868
330 Ga0068853_100026152
331 Ga0070665_100000046
332 Ga0068855_100199252
333 Ga0068857_100020392
334 Ga0068857_100475957
335 Ga0068861_100002307
336 Ga0068870_10155321
337 Ga0068858_100102096
338 Ga0068860_100038996
339 Ga0068860_100216217
340 Ga0068860_100647492
341 Ga0081455_10095125
342 Ga0070717_10006519
343 Ga0070717_10098219
344 Ga0070717_10124355
345 Ga0075428_100062843
346 Ga0075430_100085494
347 Ga0075430_100333174
348 Ga0075431_100005948
349 Ga0075429_100009294
350 Ga0075429_100021210
351 Ga0075429_100050777
352 Ga0068865_100026181
353 Ga0105240_10014059
354 Ga0105240_10487515
355 Ga0111539_10001711
356 Ga0111539_10347376
357 Ga0105245_10010811
358 Ga0114129_10009097
359 Ga0114129_10664788
360 Ga0105241_10295637
361 Ga0105242_10675662
362 Ga0105237_10049008
363 Ga0105238_10000174
364 Ga0105249_10151353
365 Ga0105249_10221966
366 Ga0157370_10047744
367 Ga0157369_10047865
368 Ga0157369_10131082
369 Ga0157374_10162091
370 Ga0157378_10164430
371 Ga0157372_10045943
372 Ga0157372_10135493
373 Ga0157375_10452324
374 Ga0157379_10110326
375 Ga0157379_10221817
376 Ga0157379_10231870
377 Ga0207643_10154899
378 Ga0207684_10058118
379 Ga0207684_10069025
380 Ga0207707_10264894
381 Ga0207695_10000126
382 Ga0207695_10299710
383 Ga0207652_10172682
384 Ga0207646_10091676
385 Ga0207659_10146460
386 Ga0207659_10169401
387 Ga0207687_10034280
388 Ga0207687_10157922
389 Ga0207664_10030197
390 Ga0207709_10098084
391 Ga0207670_10068469
392 Ga0207670_10084095
393 Ga0207669_10006421
394 Ga0207704_10043070
395 Ga0207691_10013125
396 Ga0207689_10050435
397 Ga0207689_10130108
398 Ga0207667_10171382
399 Ga0207667_10230614
400 Ga0207651_10117091
401 Ga0207674_10002254
402 Ga0207674_10535601
403 Ga0207675_100024652
404 Ga0207675_100104485
405 Ga0209966_1000595
406 Ga0209974_10034406
407 Ga0207428_10021893
408 Ga0268266_10000170
409 Ga0268266_10086618
410 Ga0268264_10175484
411 Ga0268264_10444951
412 Ga0265323_10003124
413 Ga0265323_10038743
414 Ga0307517_10025200
415 Ga0265338_10009374
416 Ga0265338_10015586
417 Ga0265338_10086508
418 Ga0265338_10094139
419 Ga0311004_157708
420 Ga0311001_1002405
421 Ga0310981_1097038
422 Ga0265324_10000072
423 Ga0265329_10029142
424 Ga0265339_10000578
425 Ga0265331_10000402
426 Ga0265327_10003499
427 Ga0265316_10092034
428 Ga0307513_10010919
429 Ga0307513_10185920
430 Ga0307509_10000280
431 Ga0307509_10113237
432 Ga0307408_100001118
433 Ga0307408_100058797
434 Ga0265313_10000598
435 Ga0307508_10050152
436 Ga0307508_10226033
437 Ga0316575_10012458
438 Ga0316579_10005899
439 Ga0265314_10000651
440 Ga0265342_10012482
441 Ga0316576_10010526
442 Ga0316576_10036056
443 Ga0316576_10118191
444 Ga0316576_10140907
445 Ga0316578_10022166
446 Ga0316578_10151130
447 Ga0307516_10058007
448 Ga0307405_10099997
449 Ga0316577_10010979
450 Ga0307413_10002381
451 Ga0307413_10018358
452 Ga0307413_10368275
453 Ga0307410_10006094
454 Ga0307410_10014718
455 Ga0307410_10047842
456 Ga0307410_10048051
457 Ga0307410_10069801
458 Ga0307410_10083282
459 Ga0307406_10007142
460 Ga0307406_10035918
461 Ga0307406_10132058
462 Ga0307407_10005499
463 Ga0307409_100012464
464 Ga0307409_100029795
465 Ga0307409_100105001
466 Ga0307409_100128902
467 Ga0307409_100169955
468 Ga0307416_100009831
469 Ga0307416_100562476
470 Ga0307414_10003538
471 Ga0307414_10196017
472 Ga0307414_10239756
473 Ga0307411_10038238
474 Ga0307411_10039119
475 Ga0307411_10053768
476 Ga0307415_100019459
477 Ga0307415_100025818
478 Ga0307415_100181693
479 Ga0307507_10048846
480 Ga0316596_1037181
481 Ga0373941_0013728
482 Ga0373955_0190661
483 Ga0373961_0000104
484 Ga0316574_0084406
485 Ga0373927_0040144
486 Ga0373937_0276050
487 Ga0316582_0025779
488 Ga0316584_0070895
489 Ga0395899_0012436
490 Ga0395898_0035837
491 Ga0395901_0048621
492 Ga0395901_0169348
493 Ga0395901_0190494
494 Ga0436365_0178624
495 Ga0436365_1054547
496 Ga0451577_0000016
497 Ga0466972_0045746
498 Ga0466966_0032551
499 Ga0453684_0000514
500 Ga0466970_0002725
501 Ga0466960_0100633
502 Ga0451576_0153058
503 Ga0466967_0098557
504 Ga0466967_0468624
505 Ga0495639_0055440
506 Ga0495608_0008615
507 Ga0495628_0132835
508 Ga0495630_0008363
509 Ga0495630_0238589
510 Ga0495587_0098802
511 Ga0495599_0116805
512 Ga0495604_0097201
513 Ga0495674_0007526
514 Ga0495675_0062368
515 Ga0495684_0009029
516 Ga0495686_0003386
517 Ga0496104_0252950
518 Ga0496108_0185310
519 Ga0496110_0343385
520 Ga0501033_0071224
521 Ga0501034_0000457
522 Ga0501034_0003494
523 Ga0501034_0009957
524 Ga0501036_0209439
525 Ga0501037_0012163
526 Ga0501038_0001033
527 Ga0501043_0054083
528 Ga0501043_0290961
529 Ga0501047_0046834
530 Ga0501047_0419894
531 Ga0501070_0004109
532 Ga0501070_0130810
533 Ga0501070_0278688
534 Ga0501072_0222786
535 Ga0501073_0018595
536 Ga0501202_001251
537 Ga0501227_000670
538 Ga0501227_042482
539 Ga0501230_003838
540 Ga0501230_015182
541 Ga0501233_009499
542 Ga0501235_006417
543 Ga0501259_003006
544 Ga0501225_0003483
545 Ga0501225_0005893
546 Ga0501229_001533
547 Ga0501080_0011789
548 Ga0501080_0106621
549 Ga0501083_0039473
550 Ga0501083_0058405
551 Ga0501035_0118154
552 Ga0501044_0026550
553 Ga0501045_0299037
554 nmdc:mga05p37_555005_c1
555 nmdc:mga05p37_717_c1
556 nmdc:mga09592_19242_c1
557 nmdc:mga09592_234285_c1
558 nmdc:mga0qj67_101634_c1
559 nmdc:mga0qj67_142264_c1
560 nmdc:mga0qj67_168822_c1
561 nmdc:mga0qj67_311456_c1
562 nmdc:mga06r32_154066_c1
563 nmdc:mga08y16_1269_c1
564 nmdc:mga08y16_376776_c1
565 nmdc:mga0a205_332464_c1
566 Ga0495601_0005806
567 Ga0495595_0108499
568 Ga0495595_0160258
569 Ga0495619_0010194
570 Ga0500578_0084258
571 Ga0500583_0028194
572 Ga0500566_0004894
573 Ga0500566_0006652
574 Ga0500566_0033357
575 Ga0500566_0112709
576 Ga0500640_027212
577 Ga0500641_0022448
578 Ga0500562_006291
579 Ga0500595_000030
580 Ga0500595_000239
581 Ga0500597_002580
582 Ga0500614_003756
583 Ga0500642_0095506
584 Ga0500658_0060912
585 Ga0500603_007258
586 Ga0500616_0000732
587 Ga0500622_0141348
588 Ga0501082_0046899
589 2673161720
590 2687239537

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

212

292

0.96

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

32

362

0.91

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

35

345

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ccr-assembly2.cif.gz_D crystal structure of the thioredoxin reductase apoenzyme from entamoeba histolytica in the absence of the nadp cofactor 0.969 1 322
4ccr-assembly2.cif.gz_D crystal structure of the thioredoxin reductase apoenzyme from entamoeba histolytica in the absence of the nadp cofactor 0.9491 1 322
3zdn-assembly2.cif.gz_D d11-c mutant of monoamine oxidase from aspergillus niger 0.9356 3 32
3zdn-assembly1.cif.gz_B d11-c mutant of monoamine oxidase from aspergillus niger 0.9291 3 32
2vvl-assembly4.cif.gz_G the structure of mao-n-d3, a variant of monoamine oxidase from aspergillus niger. 0.9288 3 32
ID Description Score Start End Superfamily
5uthA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9768 127 255 3.50.50.60
5uthA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9691 127 255 3.50.50.60
4ykgA03 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9666 127 255 3.50.50.60
4zn0C02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9645 127 255 3.50.50.60
3itjD02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9642 127 255 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A0V0GLT5-F1-model_v4 Putative ovule protein 0.9868 123 212 GO:0016668
GO:0097237
AF-A0A5C4S950-F1-model_v4 Thioredoxin-disulfide reductase 0.9862 145 255 GO:0016491
AF-A0A3D5UWY6-F1-model_v4 Thioredoxin-disulfide reductase 0.978 155 247 GO:0016491
AF-A0A5C4S950-F1-model_v4 Thioredoxin-disulfide reductase 0.9771 145 255 GO:0016491
AF-A0A3D5I228-F1-model_v4 Thioredoxin 0.9709 123 275 GO:0016668

Map