|
Taxon Oid |
3300005295
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Switchgrass rhizosphere microbial communities from Michigan, USA |
| Genome Name Sample Name |
Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) |
| Sequencing Center |
DOE Joint Genome Institute (JGI) |
| Img Genome Id |
3300005295 |
| Ncbi Phylum |
Host-associated |
| Ncbi Class |
Plants |
| Ncbi Order |
Roots |
| Ncbi Family |
Rhizosphere |
| Ncbi Genus |
Soil |
| Ncbi Species |
Switchgrass rhizosphere microbial communities from Michigan, USA |
| Img Submission Id |
59094 |
|
Gold Analysis Project Id
|
Ga0065707
|
| Gold Analysis Project Type |
Metagenome Analysis |
|
Gold Sequencing Project Id
|
Gp0051781
|
|
Gold Study Id
|
Gs0045398
|
| Add Date |
06/04/2015 00:00:00 |
| Assembly Method |
MeGAMerge version 0.9b |
| Comments |
released based on JGI ITS |
| Funding Agency |
E; D; O |
| Has Coverage |
True |
| Public Release Date |
03/25/2022 00:00:00 |
| Submission Type |
Primary |
| In File |
Yes |
| Submitter Name |
Genome Biology Program |
| Rnd Project |
True |
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
James Tiedje |
| Contact Email |
[email protected] |
| Contact Name |
James Tiedje |
| Funding Program |
GLBRC |
| Funding Year |
2010 |
| Is Published |
False |
| Pmo Project Id |
402779 |
| Ncbi Bioproject Accession |
PRJNA336897 |
| Ncbi Biosample Accession |
SAMN05518468 |
| Sequencing Method |
Illumina |
| Sequencing Strategy |
Metagenome |
| Ecosystem |
Host-associated |
| Ecosystem Category |
Plants |
| Ecosystem Subtype |
Rhizosphere |
| Ecosystem Type |
Roots |
| Specific Ecosystem |
Soil |
| Cultured |
False |
| Elevation In Meters |
250.000000 |
| Geographic Location |
East Lansing, MI |
| Habitat |
Switchgrass rhizosphere |
| Isolation |
Switchgrass rhizosphere |
| Isolation Country |
8855 |
| Latitude |
42.7948 |
| Longitude |
-84.3938 |
| Sample Collection Date |
2009/1/1 |
| Host Name |
Panicum virgatum |
| Genome Size Assembled |
2653696186 |
| Gene Count Assembled |
6996297 |