F389285

General Info

Members Datasets Scaffolds Average Seq Length
289 195 273 436

Family's Representative Sequence

Representative Sequence 3300033180|Ga0307510_10129174|Ga0307510_101291742
Length 482
Sequence MATMMAAAKSMKHYIPFICHDGSKIYLESFLTSPCCKIFRRPYLGTMADLFADDLPAQTALAEDAPLAERLRPTALDQVVGQEHLTGPEGAIGRMVAAGRLSSMILWGPPGTGKTTIARLLADAVGLRFTAISAVFSGVADLKKAFAEAREYARMGKRTLLFVDEIHRFNRAQQDGFLPYVEDGTVTLVGATTENPSFELNAALLSRAQVLILHRLDRIALEKLLARAEEVEGRPLPLTPEARDAMVASADGDGRFLLNQVETIYSVDLPEPLDPAGLSAFLQRRVAVYDKDREGHYNLISALHKAMRGSDPQASLYYLARMLTAGEEPLYVLRRITRFASEDIGLADPQALVQCLAAKDAYEFLGTPEGELAIAQACLYCAVAPKSNAAYMAQKAAWRSAKETGSLMPPKNILNAPTRLMKDIGYGKGYAYDHDTAEGYSGSNYWPEEMSPQTFYTPTDRGVEKRIAERMAWWAEIKERGE

Samples

Sample ID Description Type Environment
1 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
2 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
3 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
4 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
5 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
6 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
7 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
8 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
9 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
10 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
11 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
12 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
13 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
14 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
15 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
16 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
17 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
18 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
19 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
20 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
21 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
22 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
23 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
26 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
29 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
30 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
31 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
32 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
33 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
36 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
52 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
53 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
67 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
102 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
103 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
104 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
105 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
106 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
107 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
108 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
109 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
110 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
111 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
114 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
115 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
116 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
117 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
118 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
125 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
126 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
127 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
128 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
129 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
130 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
131 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
132 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
133 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
134 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
135 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
136 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
137 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
138 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
139 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
140 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
154 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
162 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
163 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
164 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
165 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
166 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
167 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
168 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
169 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
170 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
174 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
175 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
178 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
179 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
180 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
181 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
182 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
183 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
184 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
185 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
186 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
187 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
188 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
189 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
190 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
191 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
192 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
193 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
194 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
195 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.46
Metatranscriptomes 0
Isolates 5.54

Biome Distribution

Category Percentage (%)
Aerial Root 1.04
Bulb 0
Endosphere 16.26
Nodule 0
Rhizoplane 4.15
Rhizosphere 68.86
Stem 0
Stem Tuber 0
Unclassified 9.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000541 3300003214 Bacteria 34729
2 Ga0055530_10000040 3300003791 Bacteria 114823
3 Ga0055530_10000667 3300003791 Bacteria 29254
4 Ga0055531_10000009 3300003794 Bacteria 210399
5 Ga0055531_10000953 3300003794 Bacteria 23238
6 Ga0055531_10002667 3300003794 Bacteria 11764
7 Ga0065165_1001433 3300005262 Bacteria 25845
8 Ga0065165_1001941 3300005262 Bacteria 19688
9 Ga0065715_10089371 3300005293 Bacteria 10801
10 Ga0065707_10082356 3300005295 Bacteria 16287
11 Ga0070658_10000002 3300005327 Bacteria 637290
12 Ga0070658_10000265 3300005327 Bacteria 46194
13 Ga0070658_10059301 3300005327 Bacteria 3116
14 Ga0070666_10036502 3300005335 Bacteria 3263
15 Ga0068868_100000005 3300005338 Bacteria 132403
16 Ga0070660_100002696 3300005339 Bacteria 12199
17 Ga0070660_100004188 3300005339 Bacteria 9960
18 Ga0070692_10014068 3300005345 Bacteria 3747
19 Ga0070668_100000145 3300005347 Bacteria 45376
20 Ga0070668_100006718 3300005347 Bacteria 8524
21 Ga0070669_100027608 3300005353 Bacteria 4086
22 Ga0070669_100154086 3300005353 Bacteria 1781
23 Ga0070675_100017257 3300005354 Bacteria 5734
24 Ga0070675_100246344 3300005354 Bacteria 1563
25 Ga0070671_100000040 3300005355 Bacteria 92357
26 Ga0070673_100191721 3300005364 Bacteria 1756
27 Ga0070688_100115286 3300005365 Bacteria 1793
28 Ga0070659_100000001 3300005366 Bacteria 576390
29 Ga0070659_100003059 3300005366 Bacteria 11881
30 Ga0070667_100000013 3300005367 Bacteria 255674
31 Ga0070667_100006274 3300005367 Bacteria 9881
32 Ga0070667_100211981 3300005367 Bacteria 1722
33 Ga0070714_100000676 3300005435 Bacteria 24155
34 Ga0070701_10013172 3300005438 Bacteria 3754
35 Ga0068853_100001531 3300005539 Bacteria 16800
36 Ga0070686_100000408 3300005544 Bacteria 27000
37 Ga0070686_100035391 3300005544 Bacteria 3084
38 Ga0070665_100000038 3300005548 Bacteria 309230
39 Ga0070665_100065127 3300005548 Bacteria 3656
40 Ga0068855_100012555 3300005563 Bacteria 10226
41 Ga0070664_100103916 3300005564 Bacteria 2473
42 Ga0068854_100001419 3300005578 Bacteria 14478
43 Ga0068856_100169835 3300005614 Bacteria 2193
44 Ga0068859_100003831 3300005617 Bacteria 15369
45 Ga0068859_100018854 3300005617 Bacteria 6933
46 Ga0068859_100183622 3300005617 Bacteria 2175
47 Ga0068864_100043079 3300005618 Bacteria 3864
48 Ga0068863_100000210 3300005841 Bacteria 62419
49 Ga0068863_100009728 3300005841 Bacteria 9381
50 Ga0068858_100000038 3300005842 Bacteria 137131
51 Ga0068858_100000840 3300005842 Bacteria 31805
52 Ga0068858_100002083 3300005842 Bacteria 20331
53 Ga0068858_100115748 3300005842 Bacteria 2505
54 Ga0068860_100025932 3300005843 Bacteria 5656
55 Ga0068860_100026284 3300005843 Bacteria 5612
56 Ga0068862_100000092 3300005844 Bacteria 106896
57 Ga0081539_10091169 3300005985 Bacteria 1575
58 Ga0075363_100001640 3300006048 Bacteria 8636
59 Ga0075362_10000003 3300006177 Bacteria 171099
60 Ga0075370_10000008 3300006353 Bacteria 97966
61 Ga0097620_100003831 3300006931 Bacteria 15369
62 Ga0097620_100018854 3300006931 Bacteria 6933
63 Ga0097620_100183636 3300006931 Bacteria 2175
64 Ga0105240_10006078 3300009093 Bacteria 17832
65 Ga0105240_10028322 3300009093 Bacteria 7319
66 Ga0105247_10029114 3300009101 Bacteria 3345
67 Ga0105248_10000113 3300009177 Bacteria 91128
68 Ga0105248_10005888 3300009177 Bacteria 13475
69 Ga0105249_10000100 3300009553 Bacteria 119358
70 Ga0105249_10000786 3300009553 Bacteria 28462
71 Ga0105239_10000025 3300010375 Bacteria 254049
72 Ga0105239_10435263 3300010375 Bacteria 1487
73 Ga0157371_10025541 3300013102 Bacteria 4303
74 Ga0157370_10038223 3300013104 Bacteria 4643
75 Ga0157378_10140930 3300013297 Bacteria 2239
76 Ga0157372_10299369 3300013307 Bacteria 1871
77 Ga0157380_10000042 3300014326 Bacteria 75921
78 Ga0213876_10000811 3300021384 Bacteria 21152
79 Ga0209233_1000281 3300025261 Bacteria 70619
80 Ga0209675_1001565 3300025291 Bacteria 12979
81 Ga0209676_1000693 3300025292 Bacteria 47361
82 Ga0209676_1002803 3300025292 Bacteria 11540
83 Ga0209758_1035736 3300025297 Bacteria 1953
84 Ga0209050_1000014 3300025298 Bacteria 774327
85 Ga0209050_1000112 3300025298 Bacteria 210320
86 Ga0209050_1002269 3300025298 Bacteria 17026
87 Ga0209257_1000019 3300025304 Bacteria 774261
88 Ga0209257_1000600 3300025304 Bacteria 59824
89 Ga0209257_1000877 3300025304 Bacteria 42562
90 Ga0207680_10041438 3300025903 Bacteria 2686
91 Ga0207647_10100446 3300025904 Bacteria 1717
92 Ga0207705_10000008 3300025909 Bacteria 589717
93 Ga0207705_10000091 3300025909 Bacteria 110768
94 Ga0207705_10000583 3300025909 Bacteria 30635
95 Ga0207695_10007272 3300025913 Bacteria 14140
96 Ga0207695_10088101 3300025913 Bacteria 3125
97 Ga0207657_10000413 3300025919 Bacteria 45304
98 Ga0207657_10001122 3300025919 Bacteria 28419
99 Ga0207657_10001587 3300025919 Bacteria 24451
100 Ga0207657_10002418 3300025919 Bacteria 20170
101 Ga0207657_10007487 3300025919 Bacteria 11189
102 Ga0207649_10133974 3300025920 Bacteria 1687
103 Ga0207652_10058200 3300025921 Bacteria 3330
104 Ga0207681_10019674 3300025923 Bacteria 4269
105 Ga0207681_10082211 3300025923 Bacteria 2276
106 Ga0207650_10093913 3300025925 Bacteria 2297
107 Ga0207659_10015924 3300025926 Bacteria 4885
108 Ga0207659_10198459 3300025926 Bacteria 1601
109 Ga0207664_10000478 3300025929 Bacteria 28408
110 Ga0207644_10000005 3300025931 Bacteria 441948
111 Ga0207644_10028866 3300025931 Bacteria 3845
112 Ga0207690_10003357 3300025932 Bacteria 9572
113 Ga0207706_10049640 3300025933 Bacteria 3708
114 Ga0207711_10001614 3300025941 Bacteria 20805
115 Ga0207667_10001226 3300025949 Bacteria 32150
116 Ga0207667_10001869 3300025949 Bacteria 26473
117 Ga0207667_10013468 3300025949 Bacteria 9359
118 Ga0207712_10000008 3300025961 Bacteria 527957
119 Ga0207668_10000063 3300025972 Bacteria 87944
120 Ga0207668_10001096 3300025972 Bacteria 16127
121 Ga0207640_10017112 3300025981 Bacteria 4234
122 Ga0207658_10000040 3300025986 Bacteria 142099
123 Ga0207658_10020778 3300025986 Bacteria 4548
124 Ga0207677_10000339 3300026023 Bacteria 33498
125 Ga0207703_10000247 3300026035 Bacteria 61083
126 Ga0207703_10000782 3300026035 Bacteria 31303
127 Ga0207703_10020134 3300026035 Bacteria 5216
128 Ga0207703_10053074 3300026035 Bacteria 3294
129 Ga0207639_10002562 3300026041 Bacteria 12196
130 Ga0207641_10000178 3300026088 Bacteria 88066
131 Ga0207641_10004414 3300026088 Bacteria 12189
132 Ga0207698_10000466 3300026142 Bacteria 23506
133 Ga0209974_10017623 3300027876 Bacteria 2368
134 Ga0268266_10000176 3300028379 Bacteria 115013
135 Ga0268266_10016352 3300028379 Bacteria 6343
136 Ga0268266_10241638 3300028379 Bacteria 1667
137 Ga0268265_10000091 3300028380 Bacteria 115237
138 Ga0268265_10229341 3300028380 Bacteria 1631
139 Ga0268264_10019522 3300028381 Bacteria 5537
140 Ga0307515_10084411 3300028794 Bacteria 4079
141 Ga0265324_10005274 3300029957 Bacteria 5619
142 Ga0265331_10000260 3300031250 Bacteria 60870
143 Ga0265327_10000384 3300031251 Bacteria 83284
144 Ga0265316_10111650 3300031344 Bacteria 2070
145 Ga0307513_10164766 3300031456 Bacteria 2102
146 Ga0265313_10000296 3300031595 Bacteria 54068
147 Ga0307508_10001883 3300031616 Bacteria 23119
148 Ga0307405_10091548 3300031731 Bacteria 2015
149 Ga0307413_10049834 3300031824 Bacteria 2512
150 Ga0307410_10062742 3300031852 Bacteria 2547
151 Ga0307410_10072545 3300031852 Bacteria 2391
152 Ga0307410_10092911 3300031852 Bacteria 2146
153 Ga0307410_10109830 3300031852 Bacteria 1993
154 Ga0307412_10004649 3300031911 Bacteria 7651
155 Ga0307412_10038649 3300031911 Bacteria 3075
156 Ga0307412_10111993 3300031911 Bacteria 1950
157 Ga0307409_100001426 3300031995 Bacteria 11737
158 Ga0307409_100034454 3300031995 Bacteria 3698
159 Ga0307409_100233055 3300031995 Bacteria 1670
160 Ga0307416_100066344 3300032002 Bacteria 2971
161 Ga0307416_100079453 3300032002 Bacteria 2764
162 Ga0307416_100158634 3300032002 Bacteria 2087
163 Ga0307414_10000692 3300032004 Bacteria 17284
164 Ga0307414_10003657 3300032004 Bacteria 8240
165 Ga0307414_10014073 3300032004 Bacteria 4781
166 Ga0307414_10052617 3300032004 Bacteria 2834
167 Ga0307411_10012958 3300032005 Bacteria 4577
168 Ga0307411_10028412 3300032005 Bacteria 3400
169 Ga0307411_10040803 3300032005 Bacteria 2947
170 Ga0307411_10110638 3300032005 Bacteria 1965
171 Ga0307411_10122593 3300032005 Bacteria 1884
172 Ga0307415_100001644 3300032126 Bacteria 10826
173 Ga0307415_100019323 3300032126 Bacteria 4135
174 Ga0307415_100047309 3300032126 Bacteria 2895
175 Ga0307415_100048109 3300032126 Bacteria 2875
176 Ga0307510_10129174 3300033180 Bacteria 2206
177 Ga0395900_0023515 3300037418 Bacteria 6306
178 Ga0395898_0003055 3300037466 Bacteria 18965
179 Ga0436364_0961534 3300037853 Bacteria 2590
180 Ga0395901_0060153 3300038443 Bacteria 3952
181 Ga0436365_0794411 3300039437 Bacteria 78184
182 Ga0436362_0045454 3300039453 Bacteria 1388
183 Ga0451793_0369433 3300041452 Bacteria 1563
184 Ga0439432_009521 3300042006 Bacteria 3383
185 Ga0453684_0000204 3300044712 Bacteria 258105
186 Ga0453684_0007564 3300044712 Bacteria 19923
187 Ga0451576_0000055 3300045051 Bacteria 304830
188 Ga0451576_0000108 3300045051 Bacteria 211233
189 Ga0495638_0000332 3300046460 Bacteria 59517
190 Ga0495583_0033180 3300046506 Bacteria 2484
191 Ga0495663_0000889 3300046525 Bacteria 10072
192 Ga0495598_0001288 3300046537 Bacteria 4902
193 Ga0495621_0000076 3300046539 Bacteria 19842
194 Ga0495633_0001555 3300046558 Bacteria 17601
195 Ga0495625_0000339 3300046660 Bacteria 71474
196 Ga0495625_0001310 3300046660 Bacteria 31060
197 Ga0495625_0002466 3300046660 Bacteria 19994
198 Ga0495669_0001269 3300046684 Bacteria 10448
199 Ga0495670_0000002 3300046691 Bacteria 601814
200 Ga0495670_0000454 3300046691 Bacteria 19556
201 Ga0495677_0001973 3300047445 Bacteria 8185
202 Ga0495673_0000189 3300047469 Bacteria 99018
203 Ga0495686_0000139 3300047472 Bacteria 145796
204 Ga0496101_0008714 3300048904 Bacteria 6633
205 Ga0496102_0000418 3300048905 Bacteria 49009
206 Ga0496102_0120393 3300048905 Bacteria 2451
207 Ga0496103_0000274 3300048906 Bacteria 49009
208 Ga0496104_0025808 3300048907 Bacteria 5419
209 Ga0496105_0003875 3300048908 Bacteria 11182
210 Ga0496106_0005666 3300048909 Bacteria 9241
211 Ga0496109_0092443 3300048912 Bacteria 2798
212 Ga0496110_0106400 3300048913 Bacteria 2517
213 Ga0496113_0016558 3300048916 Bacteria 5095
214 Ga0496113_0176108 3300048916 Bacteria 1695
215 Ga0496116_0002304 3300048919 Bacteria 20241
216 Ga0496117_0000784 3300048920 Bacteria 49899
217 Ga0496117_0024761 3300048920 Bacteria 4735
218 Ga0496118_0002625 3300048921 Bacteria 23843
219 Ga0496119_0050148 3300048922 Bacteria 2575
220 Ga0496121_0000671 3300048924 Bacteria 63867
221 Ga0496124_0000846 3300048927 Bacteria 49899
222 Ga0496124_0067492 3300048927 Bacteria 2976
223 Ga0496125_0025905 3300048928 Bacteria 5359
224 Ga0496126_0001878 3300048929 Bacteria 30558
225 Ga0496126_0002397 3300048929 Bacteria 25475
226 Ga0496126_0023825 3300048929 Bacteria 5926
227 Ga0501034_0007332 3300049571 Bacteria 11749
228 Ga0501043_0005895 3300049579 Bacteria 9858
229 Ga0501047_0030304 3300049581 Bacteria 5216
230 Ga0501069_0089744 3300049585 Bacteria 1738
231 Ga0501071_0143563 3300049587 Bacteria 1779
232 Ga0501072_0102387 3300049588 Bacteria 2276
233 Ga0501076_0092906 3300049592 Bacteria 2428
234 Ga0501223_000012 3300049663 Bacteria 75953
235 Ga0501223_000033 3300049663 Bacteria 49156
236 Ga0501224_000026 3300049664 Bacteria 54620
237 Ga0501249_000137 3300049679 Bacteria 22747
238 Ga0501257_000124 3300049686 Bacteria 17793
239 Ga0501225_0000018 3300049705 Bacteria 59791
240 Ga0501225_0000138 3300049705 Bacteria 22142
241 Ga0501234_000934 3300049707 Bacteria 4623
242 Ga0501035_0083546 3300049822 Bacteria 2817
243 Ga0501044_0021308 3300049823 Bacteria 6917
244 Ga0501226_000066 3300049853 Bacteria 34204
245 nmdc:mga03683_13_c1 3300050489 Bacteria 110533
246 nmdc:mga07m45_20_c1 3300050496 Bacteria 126269
247 nmdc:mga0a205_174636_c1 3300050515 Bacteria 2044
248 Ga0500643_000648 3300053087 Bacteria 23388
249 Ga0500643_000993 3300053087 Bacteria 17437
250 Ga0500643_001496 3300053087 Bacteria 13388
251 Ga0500643_012460 3300053087 Bacteria 3045
252 Ga0500607_000098 3300053121 Bacteria 65919
253 Ga0500608_000525 3300053122 Bacteria 14312
254 Ga0500618_007772 3300053125 Bacteria 3033
255 Ga0500618_008994 3300053125 Bacteria 2750
256 Ga0500658_0000392 3300053134 Bacteria 19109
257 Ga0500559_0016313 3300053136 Bacteria 3135
258 Ga0500564_001771 3300053138 Bacteria 7633
259 Ga0500568_0001376 3300053139 Bacteria 15783
260 Ga0500568_0003504 3300053139 Bacteria 8709
261 Ga0500604_0000024 3300053151 Bacteria 68740
262 Ga0500616_0000101 3300053153 Bacteria 172722
263 Ga0500616_0007760 3300053153 Bacteria 6767
264 Ga0500624_000194 3300053157 Bacteria 23992
265 Ga0500624_000208 3300053157 Bacteria 22150
266 Ga0500636_0052555 3300053177 Bacteria 2392
267 Ga0500637_0008262 3300053178 Bacteria 5240
268 Ga0500567_001612 3300053723 Bacteria 9237
269 Ga0500625_000009 3300053729 Bacteria 159296
270 Ga0500645_005443 3300053730 Bacteria 4686
271 Ga0501082_0006409 3300060353 Bacteria 10210
272 Ga0501082_0178625 3300060353 Bacteria 1846
273 Ga0530510_0067068 3300061734 Bacteria 2603

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039453 Ga0436362_0045454 Ga0436362_0045454_19_1188 387
2 3300009553 Ga0105249_10000786 Ga0105249_100007868 388
3 3300048916 Ga0496113_0176108 Ga0496113_0176108_504_1679 388
4 3300009101 Ga0105247_10029114 Ga0105247_100291144 404
5 3300049588 Ga0501072_0102387 Ga0501072_0102387_566_1873 404
6 3300060353 Ga0501082_0006409 Ga0501082_0006409_3893_5200 404
7 3300045051 Ga0451576_0000055 Ga0451576_0000055_284666_285904 405
8 3300044712 Ga0453684_0000204 Ga0453684_0000204_225346_226656 407
9 3300028794 Ga0307515_10084411 Ga0307515_100844112 411
10 3300047469 Ga0495673_0000189 Ga0495673_0000189_73129_74430 412
11 3300049592 Ga0501076_0092906 Ga0501076_0092906_766_2052 412
12 3300060353 Ga0501082_0178625 Ga0501082_0178625_522_1808 412
13 3300061734 Ga0530510_0067068 Ga0530510_0067068_462_1748 412
14 3300005293 Ga0065715_10089371 Ga0065715_100893714 413
15 3300005438 Ga0070701_10013172 Ga0070701_100131724 413
16 3300005617 Ga0068859_100018854 Ga0068859_1000188545 413
17 3300006931 Ga0097620_100018854 Ga0097620_1000188545 413
18 3300049585 Ga0501069_0089744 Ga0501069_0089744_362_1669 413
19 3300048928 Ga0496125_0025905 Ga0496125_0025905_3737_5062 416
20 3300005295 Ga0065707_10082356 Ga0065707_100823566 418
21 3300049571 Ga0501034_0007332 Ga0501034_0007332_6470_7789 419
22 3300005353 Ga0070669_100027608 Ga0070669_1000276082 420
23 3300005355 Ga0070671_100000040 Ga0070671_10000004064 420
24 3300005367 Ga0070667_100211981 Ga0070667_1002119812 420
25 3300005544 Ga0070686_100035391 Ga0070686_1000353912 420
26 3300005617 Ga0068859_100183622 Ga0068859_1001836221 420
27 3300005618 Ga0068864_100043079 Ga0068864_1000430792 420
28 3300005842 Ga0068858_100002083 Ga0068858_10000208319 420
29 3300005842 Ga0068858_100115748 Ga0068858_1001157482 420
30 3300005843 Ga0068860_100025932 Ga0068860_1000259322 420
31 3300006931 Ga0097620_100183636 Ga0097620_1001836361 420
32 3300009177 Ga0105248_10005888 Ga0105248_100058885 420
33 3300025923 Ga0207681_10019674 Ga0207681_100196744 420
34 3300025931 Ga0207644_10000005 Ga0207644_10000005410 420
35 3300026035 Ga0207703_10000782 Ga0207703_1000078231 420
36 3300026035 Ga0207703_10053074 Ga0207703_100530743 420
37 3300028379 Ga0268266_10241638 Ga0268266_102416382 420
38 3300048904 Ga0496101_0008714 Ga0496101_0008714_270_1592 420
39 3300048905 Ga0496102_0120393 Ga0496102_0120393_957_2279 420
40 3300048909 Ga0496106_0005666 Ga0496106_0005666_5332_6654 420
41 3300048916 Ga0496113_0016558 Ga0496113_0016558_1795_3117 420
42 3300049822 Ga0501035_0083546 Ga0501035_0083546_1369_2688 420
43 3300049823 Ga0501044_0021308 Ga0501044_0021308_2788_4107 420
44 3300053125 Ga0500618_007772 Ga0500618_007772_192_1553 420
45 3300031824 Ga0307413_10049834 Ga0307413_100498342 422
46 3300032126 Ga0307415_100048109 Ga0307415_1000481092 422
47 3300053087 Ga0500643_012460 Ga0500643_012460_38_1360 423
48 3300053157 Ga0500624_000194 Ga0500624_000194_21571_22893 423
49 3300053177 Ga0500636_0052555 Ga0500636_0052555_748_2070 423
50 3300032004 Ga0307414_10014073 Ga0307414_100140732 424
51 3300005327 Ga0070658_10000002 Ga0070658_10000002629 425
52 3300005339 Ga0070660_100002696 Ga0070660_1000026961 425
53 3300005366 Ga0070659_100003059 Ga0070659_1000030597 425
54 3300013102 Ga0157371_10025541 Ga0157371_100255414 425
55 3300013104 Ga0157370_10038223 Ga0157370_100382232 425
56 3300025904 Ga0207647_10100446 Ga0207647_101004462 425
57 3300025909 Ga0207705_10000008 Ga0207705_10000008161 425
58 3300025909 Ga0207705_10000091 Ga0207705_1000009141 425
59 3300025919 Ga0207657_10001122 Ga0207657_1000112212 425
60 3300025919 Ga0207657_10007487 Ga0207657_100074874 425
61 3300025932 Ga0207690_10003357 Ga0207690_100033575 425
62 3300025949 Ga0207667_10001226 Ga0207667_100012266 425
63 3300044712 Ga0453684_0007564 Ga0453684_0007564_3684_4964 425
64 3300053121 Ga0500607_000098 Ga0500607_000098_21081_22418 425
65 3300005564 Ga0070664_100103916 Ga0070664_1001039163 426
66 3300031344 Ga0265316_10111650 Ga0265316_101116503 426
67 3300032005 Ga0307411_10040803 Ga0307411_100408033 426
68 3300032126 Ga0307415_100047309 Ga0307415_1000473093 426
69 3300029957 Ga0265324_10005274 Ga0265324_100052745 427
70 3300031250 Ga0265331_10000260 Ga0265331_1000026040 427
71 3300031595 Ga0265313_10000296 Ga0265313_1000029612 427
72 3300005435 Ga0070714_100000676 Ga0070714_10000067615 428
73 3300025929 Ga0207664_10000478 Ga0207664_1000047824 428
74 3300031251 Ga0265327_10000384 Ga0265327_1000038428 428
75 3300037418 Ga0395900_0023515 Ga0395900_0023515_505_1824 428
76 3300037466 Ga0395898_0003055 Ga0395898_0003055_6978_8297 428
77 3300038443 Ga0395901_0060153 Ga0395901_0060153_2129_3448 428
78 3300053153 Ga0500616_0007760 Ga0500616_0007760_2304_3593 428
79 iso_pu_bacteria 2511231221 2512033651 428
80 3300005354 Ga0070675_100246344 Ga0070675_1002463442 429
81 3300005365 Ga0070688_100115286 Ga0070688_1001152862 429
82 3300025926 Ga0207659_10198459 Ga0207659_101984592 429
83 3300045051 Ga0451576_0000108 Ga0451576_0000108_190922_192235 429
84 3300050515 nmdc:mga0a205_174636_c1 nmdc:mga0a205_174636_c1_451_1797 429
85 3300013307 Ga0157372_10299369 Ga0157372_102993691 430
86 3300021384 Ga0213876_10000811 Ga0213876_1000081114 430
87 3300032005 Ga0307411_10110638 Ga0307411_101106382 430
88 3300037853 Ga0436364_0961534 Ga0436364_0961534_1092_2393 430
89 3300039437 Ga0436365_0794411 Ga0436365_0794411_29302_30621 430
90 iso_pu_bacteria 2643221541 2643728755 430
91 iso_pu_bacteria 2643221605 2644036647 430
92 iso_pu_bacteria 2643221606 2644044770 430
93 iso_pu_bacteria 2643221671 2644390943 430
94 3300005338 Ga0068868_100000005 Ga0068868_10000000539 431
95 3300005366 Ga0070659_100000001 Ga0070659_10000000112 431
96 3300005544 Ga0070686_100000408 Ga0070686_10000040812 431
97 3300005548 Ga0070665_100000038 Ga0070665_100000038297 431
98 3300025919 Ga0207657_10000413 Ga0207657_1000041321 431
99 3300026023 Ga0207677_10000339 Ga0207677_1000033911 431
100 3300028379 Ga0268266_10000176 Ga0268266_1000017649 431
101 iso_pu_bacteria 2928100450 2928101374 432
102 iso_pu_bacteria 2928959182 2928960214 432
103 3300005347 Ga0070668_100006718 Ga0070668_1000067189 433
104 3300025972 Ga0207668_10001096 Ga0207668_100010964 433
105 3300048907 Ga0496104_0025808 Ga0496104_0025808_2916_4226 433
106 3300048908 Ga0496105_0003875 Ga0496105_0003875_1751_3061 433
107 3300048920 Ga0496117_0024761 Ga0496117_0024761_2893_4200 433
108 iso_pu_bacteria 2928027323 2928027382 433
109 iso_pu_bacteria 2984555340 2984558316 433
110 iso_pu_bacteria 2984564862 2984567304 433
111 iso_pu_bacteria 2993356040 2993358370 433
112 3300005367 Ga0070667_100006274 Ga0070667_1000062744 434
113 3300005539 Ga0068853_100001531 Ga0068853_1000015313 434
114 3300005563 Ga0068855_100012555 Ga0068855_1000125555 434
115 3300005614 Ga0068856_100169835 Ga0068856_1001698352 434
116 3300009093 Ga0105240_10028322 Ga0105240_100283228 434
117 3300009177 Ga0105248_10000113 Ga0105248_1000011368 434
118 3300010375 Ga0105239_10435263 Ga0105239_104352631 434
119 3300014326 Ga0157380_10000042 Ga0157380_1000004215 434
120 3300025913 Ga0207695_10088101 Ga0207695_100881013 434
121 3300025920 Ga0207649_10133974 Ga0207649_101339741 434
122 3300025921 Ga0207652_10058200 Ga0207652_100582002 434
123 3300025941 Ga0207711_10001614 Ga0207711_1000161418 434
124 3300025949 Ga0207667_10013468 Ga0207667_100134688 434
125 3300025986 Ga0207658_10020778 Ga0207658_100207784 434
126 3300026041 Ga0207639_10002562 Ga0207639_100025626 434
127 3300032002 Ga0307416_100158634 Ga0307416_1001586342 434
128 3300032126 Ga0307415_100001644 Ga0307415_1000016449 434
129 3300048905 Ga0496102_0000418 Ga0496102_0000418_15485_16798 434
130 3300048906 Ga0496103_0000274 Ga0496103_0000274_15485_16798 434
131 3300048919 Ga0496116_0002304 Ga0496116_0002304_15485_16798 434
132 3300048920 Ga0496117_0000784 Ga0496117_0000784_32212_33525 434
133 3300048921 Ga0496118_0002625 Ga0496118_0002625_7046_8359 434
134 3300048927 Ga0496124_0000846 Ga0496124_0000846_32212_33525 434
135 3300049579 Ga0501043_0005895 Ga0501043_0005895_6928_8244 434
136 3300049581 Ga0501047_0030304 Ga0501047_0030304_1595_2911 434
137 3300049679 Ga0501249_000137 Ga0501249_000137_7517_8827 434
138 3300049686 Ga0501257_000124 Ga0501257_000124_13853_15163 434
139 3300053125 Ga0500618_008994 Ga0500618_008994_73_1386 434
140 iso_pu_bacteria 2643221563 2643832704 434
141 iso_pu_bacteria 2643221608 2644053501 434
142 iso_pu_bacteria 2852680915 2852683739 434
143 3300005262 Ga0065165_1001433 Ga0065165_100143319 435
144 3300005841 Ga0068863_100009728 Ga0068863_1000097289 435
145 3300005843 Ga0068860_100026284 Ga0068860_1000262843 435
146 3300005844 Ga0068862_100000092 Ga0068862_10000009288 435
147 3300009553 Ga0105249_10000100 Ga0105249_1000010085 435
148 3300025961 Ga0207712_10000008 Ga0207712_1000000848 435
149 3300026088 Ga0207641_10004414 Ga0207641_100044145 435
150 3300028380 Ga0268265_10000091 Ga0268265_1000009120 435
151 3300028381 Ga0268264_10019522 Ga0268264_100195223 435
152 3300048929 Ga0496126_0023825 Ga0496126_0023825_4419_5735 435
153 3300053157 Ga0500624_000208 Ga0500624_000208_19397_20707 435
154 3300053178 Ga0500637_0008262 Ga0500637_0008262_2487_3797 435
155 iso_pu_bacteria 2830075706 2830076718 435
156 3300003791 Ga0055530_10000040 Ga0055530_1000004065 436
157 3300003794 Ga0055531_10000009 Ga0055531_10000009160 436
158 3300005327 Ga0070658_10000265 Ga0070658_1000026539 436
159 3300005335 Ga0070666_10036502 Ga0070666_100365022 436
160 3300005347 Ga0070668_100000145 Ga0070668_10000014511 436
161 3300005367 Ga0070667_100000013 Ga0070667_100000013191 436
162 3300005841 Ga0068863_100000210 Ga0068863_10000021056 436
163 3300009093 Ga0105240_10006078 Ga0105240_100060782 436
164 3300010375 Ga0105239_10000025 Ga0105239_1000002552 436
165 3300025298 Ga0209050_1000014 Ga0209050_1000014321 436
166 3300025304 Ga0209257_1000019 Ga0209257_1000019371 436
167 3300025903 Ga0207680_10041438 Ga0207680_100414383 436
168 3300025913 Ga0207695_10007272 Ga0207695_100072729 436
169 3300025972 Ga0207668_10000063 Ga0207668_1000006379 436
170 3300025986 Ga0207658_10000040 Ga0207658_1000004079 436
171 3300026088 Ga0207641_10000178 Ga0207641_1000017879 436
172 3300031456 Ga0307513_10164766 Ga0307513_101647662 436
173 3300031731 Ga0307405_10091548 Ga0307405_100915482 436
174 3300031911 Ga0307412_10111993 Ga0307412_101119932 436
175 3300032004 Ga0307414_10003657 Ga0307414_100036572 436
176 3300046691 Ga0495670_0000002 Ga0495670_0000002_524878_526206 436
177 3300048912 Ga0496109_0092443 Ga0496109_0092443_853_2172 436
178 3300048913 Ga0496110_0106400 Ga0496110_0106400_1113_2432 436
179 3300048924 Ga0496121_0000671 Ga0496121_0000671_53443_54756 436
180 3300048927 Ga0496124_0067492 Ga0496124_0067492_1114_2433 436
181 3300048929 Ga0496126_0001878 Ga0496126_0001878_9129_10442 436
182 3300049587 Ga0501071_0143563 Ga0501071_0143563_408_1721 436
183 3300049663 Ga0501223_000012 Ga0501223_000012_42205_43521 436
184 3300049663 Ga0501223_000033 Ga0501223_000033_34663_35982 436
185 3300049664 Ga0501224_000026 Ga0501224_000026_18625_19944 436
186 3300049705 Ga0501225_0000018 Ga0501225_0000018_48868_50187 436
187 3300049705 Ga0501225_0000138 Ga0501225_0000138_6695_8011 436
188 3300049707 Ga0501234_000934 Ga0501234_000934_1035_2354 436
189 3300049853 Ga0501226_000066 Ga0501226_000066_19728_21047 436
190 3300053087 Ga0500643_000993 Ga0500643_000993_15276_16595 436
191 3300053139 Ga0500568_0003504 Ga0500568_0003504_7004_8326 436
192 3300053151 Ga0500604_0000024 Ga0500604_0000024_57402_58724 436
193 3300053153 Ga0500616_0000101 Ga0500616_0000101_168412_169734 436
194 3300053730 Ga0500645_005443 Ga0500645_005443_1451_2770 436
195 3300005327 Ga0070658_10059301 Ga0070658_100593012 437
196 3300005339 Ga0070660_100004188 Ga0070660_10000418810 437
197 3300005353 Ga0070669_100154086 Ga0070669_1001540862 437
198 3300005354 Ga0070675_100017257 Ga0070675_1000172574 437
199 3300005364 Ga0070673_100191721 Ga0070673_1001917211 437
200 3300005578 Ga0068854_100001419 Ga0068854_10000141913 437
201 3300005617 Ga0068859_100003831 Ga0068859_10000383112 437
202 3300005842 Ga0068858_100000840 Ga0068858_10000084029 437
203 3300005985 Ga0081539_10091169 Ga0081539_100911691 437
204 3300006048 Ga0075363_100001640 Ga0075363_1000016407 437
205 3300006177 Ga0075362_10000003 Ga0075362_10000003147 437
206 3300006353 Ga0075370_10000008 Ga0075370_1000000867 437
207 3300006931 Ga0097620_100003831 Ga0097620_1000038314 437
208 3300013297 Ga0157378_10140930 Ga0157378_101409302 437
209 3300025909 Ga0207705_10000583 Ga0207705_1000058331 437
210 3300025919 Ga0207657_10001587 Ga0207657_1000158718 437
211 3300025919 Ga0207657_10002418 Ga0207657_100024187 437
212 3300025925 Ga0207650_10093913 Ga0207650_100939132 437
213 3300025926 Ga0207659_10015924 Ga0207659_100159242 437
214 3300025931 Ga0207644_10028866 Ga0207644_100288662 437
215 3300025933 Ga0207706_10049640 Ga0207706_100496402 437
216 3300025949 Ga0207667_10001869 Ga0207667_1000186917 437
217 3300025981 Ga0207640_10017112 Ga0207640_100171121 437
218 3300026035 Ga0207703_10020134 Ga0207703_100201343 437
219 3300027876 Ga0209974_10017623 Ga0209974_100176232 437
220 3300028379 Ga0268266_10016352 Ga0268266_100163524 437
221 3300028380 Ga0268265_10229341 Ga0268265_102293412 437
222 3300031616 Ga0307508_10001883 Ga0307508_100018836 437
223 3300031852 Ga0307410_10062742 Ga0307410_100627422 437
224 3300031852 Ga0307410_10072545 Ga0307410_100725452 437
225 3300031852 Ga0307410_10092911 Ga0307410_100929112 437
226 3300031911 Ga0307412_10004649 Ga0307412_100046495 437
227 3300031995 Ga0307409_100034454 Ga0307409_1000344542 437
228 3300031995 Ga0307409_100233055 Ga0307409_1002330551 437
229 3300032002 Ga0307416_100066344 Ga0307416_1000663442 437
230 3300032004 Ga0307414_10000692 Ga0307414_1000069213 437
231 3300032004 Ga0307414_10052617 Ga0307414_100526172 437
232 3300032005 Ga0307411_10012958 Ga0307411_100129582 437
233 3300032005 Ga0307411_10122593 Ga0307411_101225932 437
234 3300042006 Ga0439432_009521 Ga0439432_009521_220_1548 437
235 3300046460 Ga0495638_0000332 Ga0495638_0000332_33568_34881 437
236 3300046506 Ga0495583_0033180 Ga0495583_0033180_1107_2420 437
237 3300046525 Ga0495663_0000889 Ga0495663_0000889_7653_8981 437
238 3300046537 Ga0495598_0001288 Ga0495598_0001288_1131_2459 437
239 3300046539 Ga0495621_0000076 Ga0495621_0000076_9822_11150 437
240 3300046558 Ga0495633_0001555 Ga0495633_0001555_12878_14206 437
241 3300046660 Ga0495625_0001310 Ga0495625_0001310_11766_13079 437
242 3300046660 Ga0495625_0002466 Ga0495625_0002466_1262_2575 437
243 3300046684 Ga0495669_0001269 Ga0495669_0001269_8610_9938 437
244 3300046691 Ga0495670_0000454 Ga0495670_0000454_8807_10135 437
245 3300047445 Ga0495677_0001973 Ga0495677_0001973_974_2302 437
246 3300047472 Ga0495686_0000139 Ga0495686_0000139_1255_2580 437
247 3300048929 Ga0496126_0002397 Ga0496126_0002397_16202_17527 437
248 3300050489 nmdc:mga03683_13_c1 nmdc:mga03683_13_c1_65200_66528 437
249 3300050496 nmdc:mga07m45_20_c1 nmdc:mga07m45_20_c1_33849_35177 437
250 3300053087 Ga0500643_000648 Ga0500643_000648_3106_4419 437
251 3300053087 Ga0500643_001496 Ga0500643_001496_1117_2439 437
252 3300053122 Ga0500608_000525 Ga0500608_000525_1656_2978 437
253 3300053134 Ga0500658_0000392 Ga0500658_0000392_8295_9608 437
254 3300053136 Ga0500559_0016313 Ga0500559_0016313_1141_2463 437
255 3300053138 Ga0500564_001771 Ga0500564_001771_943_2265 437
256 3300053723 Ga0500567_001612 Ga0500567_001612_3388_4710 437
257 3300053729 Ga0500625_000009 Ga0500625_000009_78719_80041 437
258 iso_pu_bacteria 643348555 643390030 437
259 3300003791 Ga0055530_10000667 Ga0055530_1000066713 438
260 3300003794 Ga0055531_10000953 Ga0055531_1000095313 438
261 3300003794 Ga0055531_10002667 Ga0055531_100026677 438
262 3300025291 Ga0209675_1001565 Ga0209675_10015652 438
263 3300025292 Ga0209676_1000693 Ga0209676_10006937 438
264 3300025292 Ga0209676_1002803 Ga0209676_10028033 438
265 3300025297 Ga0209758_1035736 Ga0209758_10357362 438
266 3300025298 Ga0209050_1000112 Ga0209050_100011248 438
267 3300025298 Ga0209050_1002269 Ga0209050_10022697 438
268 3300025304 Ga0209257_1000600 Ga0209257_100060014 438
269 3300025304 Ga0209257_1000877 Ga0209257_10008774 438
270 3300031911 Ga0307412_10038649 Ga0307412_100386491 438
271 3300046660 Ga0495625_0000339 Ga0495625_0000339_1084_2403 438
272 3300053139 Ga0500568_0001376 Ga0500568_0001376_6349_7668 438
273 3300005548 Ga0070665_100065127 Ga0070665_1000651274 440
274 3300005345 Ga0070692_10014068 Ga0070692_100140681 444
275 3300005262 Ga0065165_1001941 Ga0065165_10019415 445
276 3300005842 Ga0068858_100000038 Ga0068858_10000003832 445
277 3300026035 Ga0207703_10000247 Ga0207703_1000024739 445
278 3300031852 Ga0307410_10109830 Ga0307410_101098302 446
279 3300032005 Ga0307411_10028412 Ga0307411_100284124 446
280 3300031995 Ga0307409_100001426 Ga0307409_1000014265 447
281 3300032002 Ga0307416_100079453 Ga0307416_1000794533 447
282 3300032126 Ga0307415_100019323 Ga0307415_1000193233 447
283 3300048922 Ga0496119_0050148 Ga0496119_0050148_243_1598 448
284 3300026142 Ga0207698_10000466 Ga0207698_1000046610 449
285 3300041452 Ga0451793_0369433 Ga0451793_0369433_179_1546 450
286 3300025923 Ga0207681_10082211 Ga0207681_100822112 451
287 3300033180 Ga0307510_10129174 Ga0307510_101291742 456
288 3300003214 JGI25165J46597_1000541 JGI25165J46597_100054112 458
289 3300025261 Ga0209233_1000281 Ga0209233_100028145 458

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12002

MgsA_C

MgsA AAA+ ATPase C terminal

309

475

0.99

PF16193

AAA_assoc_2

AAA C-terminal domain

232

308

0.95

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

104

216

0.85

PF07728

AAA_5

AAA domain (dynein-related subfamily)

103

217

0.79

PF05496

RuvB_N

Holliday junction DNA helicase RuvB P-loop domain

71

208

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ctd-assembly1.cif.gz_A-2 crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris 0.9355 272 443
8g28-assembly1.cif.gz_A crystal structure of the c-terminal fragment of aaa atpase from streptococcus pneumoniae. 0.9337 272 375
3bge-assembly1.cif.gz_A crystal structure of the c-terminal fragment of aaa+atpase from haemophilus influenzae 0.9249 273 449
3ctd-assembly1.cif.gz_A-2 crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris 0.9177 272 443
3ctd-assembly1.cif.gz_B-2 crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris 0.914 272 445
ID Description Score Start End Superfamily
3pvsB03 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9874 268 362 1.20.272.10
3bgeA01 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9836 273 364 1.20.272.10
af_P40151_125_295_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9758 40 190 3.40.50.300
af_A0A1D8PCY7_414_516_1.20.272.10 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9713 265 362 1.20.272.10
af_Q8IIN7_541_638_1.20.272.10 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.969 272 364 1.20.272.10
ID Description Score Start End GO Terms
AF-W1VGH2-F1-model_v4 Recombination factor protein RarA 1 52 183 GO:0000731
GO:0005524
GO:0006261
GO:0008047
GO:0016887
GO:0017116
AF-A0A3B9RLT2-F1-model_v4 deleted 0.9987 39 193
AF-A0A353YC30-F1-model_v4 AAA family ATPase 0.9916 42 221 GO:0000731
GO:0005524
GO:0006261
GO:0008047
GO:0016887
GO:0017116
AF-A0A537Y360-F1-model_v4 AAA family ATPase 0.9893 42 242 GO:0000731
GO:0005524
GO:0006261
GO:0008047
GO:0016887
GO:0017116
AF-A0A382RE90-F1-model_v4 AAA+ ATPase domain-containing protein 0.9879 42 187 GO:0000731
GO:0005524
GO:0006261
GO:0006310
GO:0008047
GO:0009378
GO:0016887
GO:0017116

Feature Viewer

pLDDT pTM Quality
83.5 0.51 Medium
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Predicted Structure (AlphaFold2)

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