Scaffold Information

Sample ID 3300005548
Scaffold Ga0070665_100000038
Sample Name Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG
Length 309230
Fam Num 60
Taxonomy Bacteria
Environment Rhizosphere
Lineage Bacteria;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. So64.6b

CRISPR Details

Start Coordinate: 308299 End Coordinate: 308450
Position Repeat Spacer
308299 TTGTTGAACGTGTCGCTGCCGCCGC CGAAATCGCTGCCGCCGAGCGCCTGGAACAGGCCGGCA
308362 TTGTTGAACGTGTCGCCGCCGGCGC CGAGCAGGATCTGGCCGCGGACAATGCCGGTCGCCAGA
308425 TTGTTGATCACGGTCGGGCCGCCGC -

PFAM Info

PFAM Domain Meaning GOTerms

Scaffold Families

F306147 , F323202 , F344191 , F362474 , F389285 , F389901 , F394608 , F402542 , F415140 , F418967 , F428539 , F434756 , F442875 , F444339 , F451637 , F453278 , F456071 , F458356 , F464105 , F464678 , F467367 , F467633 , F470443 , F471376 , F472494 , F475714 , F476842 , F483033 , F483419 , F483517 , F484308 , F486235 , F486485 , F488794 , F488883 , F488885 , F489465 , F489634 , F490496 , F490964 , F491087 , F491210 , F491476 , F491630 , F492653 , F494369 , F495670 , F495780 , F496148 , F496203 , F496229 , F496281 , F496484 , F496863 , F496895 , F496978 , F497157 , F497194 , F497215 , F497491