F306147
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 199 | 160 | 171 | 498 |
Family's Representative Sequence
| Representative Sequence | 3300044684|Ga0466966_0004596|Ga0466966_0004596_3699_5414 |
| Length | 571 |
| Sequence | MFAIILLRTSGDTVSIRQPFHGTIPPHFGAGGKKIPGGVARTGFRVKIGATEAVKRSMNDSTVTRLNPALVERKRARIVGGHPARTLDLFAGCGGLSLGFDAAGFKSIGAVEFDPDAARSHALNFMGDLPRALFEAHAAAKDITKIEPQDLLRTFQLDGPVEDQVDVIVGGPPCQAFARVGRAKLREVADHPEAFLQDPRGNLYLRYLHYVNVLKPIALLMENVPDVLNYGGHNIAEETCELLTEMGYRCGYTLLNSVYFGVPQMRERMFLVAIASEIASEITFPSPTHWIEMPRGYEGTRQVALQTVKRDLFGEDIYFVTPSPADASKCAPAVTAEQALGDLPRITAHLEGKLKKGARRFDTLVPYGTATEDLSTYAKLMRSWPGFENDEGVKDHVIRYLPRDYAIFERMAPGDQYPEAHQHALALFEERIAALRARKKKPLGPRSREYQALWDATVPPYDASKFPNKWRKMERDAPARTLMAHLGKDSYSHIHYDSTQARTISVREAARLQSFPDGFVLSGSMNPAFKQIGNAVPPLLAKAVASHMLKMIKPAEEERAHESKNPAETVS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 2 | 2511231019 | Pseudomonas sp. GM67 | Isolate | Nodule |
| 3 | 2513237086 | Sinorhizobium meliloti MVII-I | Isolate | Nodule |
| 4 | 2600255279 | Rhizobium sp. NFIX01 | Isolate | Rhizoplane |
| 5 | 2600255308 | Rhizobium sp. NFIX02 | Isolate | Rhizoplane |
| 6 | 2643221541 | Sphingomonas sp. Root50 | Isolate | Unclassified |
| 7 | 2643221573 | Lysobacter sp. Root604 | Isolate | Unclassified |
| 8 | 2643221599 | Rhizobium sp. Root708 | Isolate | Unclassified |
| 9 | 2643221606 | Sphingomonas sp. Root720 | Isolate | Unclassified |
| 10 | 2643221671 | Sphingomonas sp. Root1294 | Isolate | Unclassified |
| 11 | 2775506901 | Microvirga ossetica V5/3m | Isolate | Unclassified |
| 12 | 2791355123 | Mesorhizobium sophorae ICMP 19535 | Isolate | Unclassified |
| 13 | 2791355264 | Rhizobium sp. S9 | Isolate | Nodule |
| 14 | 2791355265 | Rhizobium sp. H4 | Isolate | Nodule |
| 15 | 2841734538 | Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 | Isolate | Nodule |
| 16 | 2842775625 | Roseomonas sp. R-71825 | Isolate | Unclassified |
| 17 | 2856342000 | Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 | Isolate | Nodule |
| 18 | 2871435913 | Mesorhizobium sp. M7A.F.Ca.MR.228.00.0.0 | Isolate | Nodule |
| 19 | 2909399089 | Nguyenibacter vanlangensis LMG 31431 | Isolate | Unclassified |
| 20 | 2937016420 | Sinorhizobium meliloti USDA1027 | Isolate | Nodule |
| 21 | 2939674588 | Arthrobacter bambusae 3552 | Isolate | Rhizosphere |
| 22 | 2957484790 | Sinorhizobium meliloti USDA1464 | Isolate | Nodule |
| 23 | 2974307012 | Stenotrophomonas sp. SORGH_AS_0282 | Isolate | Unclassified |
| 24 | 2984514374 | Stenotrophomonas sp. SORGH_AS282 | Isolate | Aerial Root |
| 25 | 2996386984 | Mesorhizobium sp. M7A.F.Ca.MR.245.00.0.0 | Isolate | Nodule |
| 26 | 3003930520 | Sinorhizobium sp. BG8 | Isolate | Unclassified |
| 27 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 28 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 29 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 30 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 31 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 32 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 33 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 34 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 35 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 36 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 37 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 38 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 40 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 42 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Metagenome | Rhizosphere |
| 44 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 45 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 46 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 47 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 48 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 49 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 50 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 51 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 52 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 54 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 55 | 3300006948 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 | Metagenome | Nodule |
| 56 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 61 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 62 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 63 | 3300012498 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410 | Metagenome | Rhizosphere |
| 64 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 68 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 69 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 70 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 71 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 73 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 74 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 75 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 76 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 77 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 78 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 79 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 80 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 81 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300027666 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) | Metagenome | Nodule |
| 93 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 94 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 97 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 98 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 99 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 100 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 101 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 102 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 103 | 3300042013 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 | Metagenome | Rhizosphere |
| 104 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 105 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 106 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 107 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 108 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 109 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 110 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 111 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 112 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 113 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046458 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 135 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 136 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 137 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 138 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 139 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 140 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 141 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 142 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 143 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 144 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 145 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 146 | 3300049460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere | Metagenome | Rhizosphere |
| 147 | 3300049764 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control | Metagenome | Rhizosphere |
| 148 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 149 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 150 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 151 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 152 | 3300053111 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere | Metagenome | Endosphere |
| 153 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 154 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 155 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 156 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 157 | 8001845381 | Ancylobacter sonchi VKM B-3145 | Isolate | Unclassified |
| 158 | 8005682033 | Rhizobium dioscoreae S-93 | Isolate | Unclassified |
| 159 | 8018127388 | Rhizobium aegyptiacum 950 | Isolate | Nodule |
| 160 | 8056148874 | Pseudomonas khavaziana SWRI124 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 85.43 |
| Metatranscriptomes | 0 |
| Isolates | 14.57 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.5 |
| Bulb | 0 |
| Endosphere | 17.09 |
| Nodule | 6.53 |
| Rhizoplane | 2.01 |
| Rhizosphere | 57.79 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 16.08 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | SwRhRL2b_contig_796017 | 2162886007 | Bacteria | 5502 |
| 2 | JGI24739J22299_10000412 | 3300001989 | Bacteria | 14771 |
| 3 | rootH1_10000282 | 3300003316 | Bacteria | 1223 |
| 4 | rootH1_10000282 | 3300003323 | Bacteria | 25914 |
| 5 | rootH1_10020809 | 3300003323 | Bacteria | 47178 |
| 6 | rootH1_10064175 | 3300003323 | Bacteria | 9117 |
| 7 | Ga0055526_1000015 | 3300003771 | Bacteria | 226543 |
| 8 | Ga0055537_1000053 | 3300003773 | Bacteria | 82599 |
| 9 | Ga0055524_1000059 | 3300003775 | Bacteria | 138562 |
| 10 | Ga0055524_1002695 | 3300003775 | Bacteria | 8984 |
| 11 | Ga0055536_1000017 | 3300003781 | Bacteria | 221741 |
| 12 | Ga0055534_1000017 | 3300003784 | Bacteria | 138670 |
| 13 | Ga0055528_1000008 | 3300003790 | Bacteria | 226543 |
| 14 | Ga0055528_1000041 | 3300003790 | Bacteria | 111560 |
| 15 | Ga0055530_10000032 | 3300003791 | Bacteria | 121590 |
| 16 | Ga0055530_10000876 | 3300003791 | Bacteria | 24743 |
| 17 | Ga0055531_10001218 | 3300003794 | Bacteria | 19679 |
| 18 | Ga0065704_10071090 | 3300005289 | Bacteria | 13241 |
| 19 | Ga0070658_10000149 | 3300005327 | Bacteria | 61881 |
| 20 | Ga0070658_10003409 | 3300005327 | Bacteria | 13076 |
| 21 | Ga0070683_100048993 | 3300005329 | Viruses | 3906 |
| 22 | Ga0070660_100146895 | 3300005339 | Bacteria | 1894 |
| 23 | Ga0070692_10001069 | 3300005345 | Bacteria | 9507 |
| 24 | Ga0070659_100001312 | 3300005366 | Bacteria | 18018 |
| 25 | Ga0070659_100003799 | 3300005366 | Bacteria | 10779 |
| 26 | Ga0070703_10000125 | 3300005406 | Bacteria | 39636 |
| 27 | Ga0070700_100004522 | 3300005441 | Bacteria | 7272 |
| 28 | Ga0070698_100005960 | 3300005471 | Bacteria | 13286 |
| 29 | Ga0070699_100056262 | 3300005518 | Bacteria | 3406 |
| 30 | Ga0070684_100014666 | 3300005535 | Bacteria | 6356 |
| 31 | Ga0070665_100000038 | 3300005548 | Bacteria | 309230 |
| 32 | Ga0068855_100076646 | 3300005563 | Bacteria | 3880 |
| 33 | Ga0068860_100000032 | 3300005843 | Bacteria | 251624 |
| 34 | Ga0075432_10000527 | 3300006058 | Bacteria | 11492 |
| 35 | Ga0097621_100000191 | 3300006237 | Bacteria | 39497 |
| 36 | Ga0068871_100000314 | 3300006358 | Bacteria | 33723 |
| 37 | Ga0075436_100000184 | 3300006914 | Bacteria | 39212 |
| 38 | Ga0099826_10001723 | 3300006948 | Bacteria | 13477 |
| 39 | Ga0105251_10009777 | 3300009011 | Bacteria | 5626 |
| 40 | Ga0105251_10012643 | 3300009011 | Bacteria | 4768 |
| 41 | Ga0105244_10010388 | 3300009036 | Bacteria | 5649 |
| 42 | Ga0105244_10047013 | 3300009036 | Bacteria | 2215 |
| 43 | Ga0105250_10004561 | 3300009092 | Bacteria | 6350 |
| 44 | Ga0105240_10022121 | 3300009093 | Bacteria | 8438 |
| 45 | Ga0105243_10004165 | 3300009148 | Bacteria | 11475 |
| 46 | Ga0105238_10000687 | 3300009551 | Bacteria | 35477 |
| 47 | Ga0105239_10000028 | 3300010375 | Bacteria | 243470 |
| 48 | Ga0157345_1000030 | 3300012498 | Bacteria | 35357 |
| 49 | Ga0157371_10013220 | 3300013102 | Bacteria | 6283 |
| 50 | Ga0157370_10009082 | 3300013104 | Bacteria | 10661 |
| 51 | Ga0157370_10013018 | 3300013104 | Bacteria | 8593 |
| 52 | Ga0157372_10006723 | 3300013307 | Bacteria | 12230 |
| 53 | Ga0182008_10000657 | 3300014497 | Bacteria | 25118 |
| 54 | Ga0182008_10002228 | 3300014497 | Bacteria | 12283 |
| 55 | Ga0182008_10005591 | 3300014497 | Bacteria | 7128 |
| 56 | Ga0182006_1000017 | 3300015261 | Bacteria | 299454 |
| 57 | Ga0182005_1012108 | 3300015265 | Bacteria | 2443 |
| 58 | Ga0209759_1004682 | 3300025256 | Bacteria | 5014 |
| 59 | Ga0209233_1000548 | 3300025261 | Bacteria | 20828 |
| 60 | Ga0209565_1000001 | 3300025263 | Bacteria | 2950419 |
| 61 | Ga0209673_1000001 | 3300025273 | Bacteria | 3176258 |
| 62 | Ga0209673_1000225 | 3300025273 | Bacteria | 111612 |
| 63 | Ga0209675_1000001 | 3300025291 | Bacteria | 2950293 |
| 64 | Ga0209676_1000107 | 3300025292 | Bacteria | 221793 |
| 65 | Ga0209564_1000001 | 3300025295 | Bacteria | 3176258 |
| 66 | Ga0209050_1000056 | 3300025298 | Bacteria | 338703 |
| 67 | Ga0209050_1000088 | 3300025298 | Bacteria | 257442 |
| 68 | Ga0209050_1000315 | 3300025298 | Bacteria | 98447 |
| 69 | Ga0209256_1000006 | 3300025299 | Bacteria | 1250310 |
| 70 | Ga0209256_1000229 | 3300025299 | Bacteria | 102094 |
| 71 | Ga0209256_1000997 | 3300025299 | Bacteria | 33618 |
| 72 | Ga0209256_1009731 | 3300025299 | Bacteria | 4152 |
| 73 | Ga0209051_1000022 | 3300025303 | Bacteria | 474879 |
| 74 | Ga0209257_1000030 | 3300025304 | Bacteria | 689812 |
| 75 | Ga0209257_1003229 | 3300025304 | Bacteria | 14357 |
| 76 | Ga0207655_1000782 | 3300025728 | Bacteria | 34897 |
| 77 | Ga0207655_1004139 | 3300025728 | Bacteria | 10416 |
| 78 | Ga0207713_1007350 | 3300025735 | Bacteria | 6516 |
| 79 | Ga0207713_1028248 | 3300025735 | Bacteria | 2533 |
| 80 | Ga0207653_10000208 | 3300025885 | Bacteria | 39517 |
| 81 | Ga0207705_10000022 | 3300025909 | Bacteria | 302232 |
| 82 | Ga0207695_10001687 | 3300025913 | Bacteria | 35481 |
| 83 | Ga0207694_10000044 | 3300025924 | Bacteria | 169595 |
| 84 | Ga0207690_10001022 | 3300025932 | Bacteria | 17926 |
| 85 | Ga0207690_10002255 | 3300025932 | Bacteria | 11755 |
| 86 | Ga0207709_10002177 | 3300025935 | Bacteria | 12538 |
| 87 | Ga0207661_10121364 | 3300025944 | Unclassified | 2225 |
| 88 | Ga0207667_10150140 | 3300025949 | Bacteria | 2399 |
| 89 | Ga0207708_10003902 | 3300026075 | Bacteria | 10973 |
| 90 | Ga0209282_1005544 | 3300027666 | Bacteria | 7763 |
| 91 | Ga0207428_10005655 | 3300027907 | Bacteria | 11620 |
| 92 | Ga0268266_10000176 | 3300028379 | Bacteria | 115013 |
| 93 | Ga0268264_10000045 | 3300028381 | Bacteria | 364764 |
| 94 | Ga0268264_10068971 | 3300028381 | Bacteria | 2990 |
| 95 | Ga0307515_10046765 | 3300028794 | Bacteria | 6603 |
| 96 | Ga0307511_10001484 | 3300030521 | Bacteria | 24833 |
| 97 | Ga0265327_10001051 | 3300031251 | Bacteria | 38616 |
| 98 | Ga0265316_10002674 | 3300031344 | Bacteria | 18366 |
| 99 | Ga0395900_0002591 | 3300037418 | Bacteria | 19777 |
| 100 | Ga0395905_0001329 | 3300037471 | Bacteria | 30166 |
| 101 | Ga0395901_0009149 | 3300038443 | Bacteria | 10033 |
| 102 | Ga0395901_0035631 | 3300038443 | Bacteria | 5142 |
| 103 | Ga0439456_008573 | 3300042013 | Unclassified | 2112 |
| 104 | Ga0451577_0016908 | 3300042876 | Bacteria | 6746 |
| 105 | Ga0466969_0003635 | 3300044656 | Bacteria | 8206 |
| 106 | Ga0466966_0004596 | 3300044684 | Bacteria | 9093 |
| 107 | Ga0466966_0008571 | 3300044684 | Bacteria | 6766 |
| 108 | Ga0466961_0000730 | 3300044693 | Bacteria | 20657 |
| 109 | Ga0466961_0001832 | 3300044693 | Bacteria | 13193 |
| 110 | Ga0453684_0113144 | 3300044712 | Bacteria | 3293 |
| 111 | Ga0453684_0189316 | 3300044712 | Bacteria | 2408 |
| 112 | Ga0466957_0010782 | 3300044842 | Bacteria | 5255 |
| 113 | Ga0466959_0007071 | 3300045049 | Bacteria | 7846 |
| 114 | Ga0451576_0022492 | 3300045051 | Bacteria | 6835 |
| 115 | Ga0466958_0004252 | 3300045836 | Bacteria | 7529 |
| 116 | Ga0495627_000324 | 3300046453 | Bacteria | 46576 |
| 117 | Ga0495591_002312 | 3300046458 | Bacteria | 10781 |
| 118 | Ga0495584_0000714 | 3300046491 | Bacteria | 21918 |
| 119 | Ga0495596_0000359 | 3300046500 | Bacteria | 29317 |
| 120 | Ga0495607_0000745 | 3300046501 | Bacteria | 31188 |
| 121 | Ga0495583_0017554 | 3300046506 | Bacteria | 3795 |
| 122 | Ga0495606_0005401 | 3300046507 | Bacteria | 12251 |
| 123 | Ga0495606_0005845 | 3300046507 | Bacteria | 11603 |
| 124 | Ga0495606_0007674 | 3300046507 | Bacteria | 9566 |
| 125 | Ga0495632_0000023 | 3300046519 | Bacteria | 180933 |
| 126 | Ga0495632_0015041 | 3300046519 | Bacteria | 4353 |
| 127 | Ga0495637_0000187 | 3300046520 | Bacteria | 48520 |
| 128 | Ga0495637_0022610 | 3300046520 | Bacteria | 2866 |
| 129 | Ga0495648_0041075 | 3300046524 | Bacteria | 2925 |
| 130 | Ga0495663_0000019 | 3300046525 | Bacteria | 129361 |
| 131 | Ga0495654_0002736 | 3300046530 | Bacteria | 11125 |
| 132 | Ga0495633_0000282 | 3300046558 | Bacteria | 58356 |
| 133 | Ga0495625_0000116 | 3300046660 | Bacteria | 122740 |
| 134 | Ga0495625_0000445 | 3300046660 | Bacteria | 62062 |
| 135 | Ga0495625_0048976 | 3300046660 | Bacteria | 3039 |
| 136 | Ga0495661_0001867 | 3300046665 | Bacteria | 16830 |
| 137 | Ga0495649_0000436 | 3300046694 | Bacteria | 36073 |
| 138 | Ga0495589_0001606 | 3300046794 | Bacteria | 12947 |
| 139 | Ga0495672_0013664 | 3300047320 | Bacteria | 5589 |
| 140 | Ga0495683_0001988 | 3300047323 | Bacteria | 12734 |
| 141 | Ga0495686_0000768 | 3300047472 | Bacteria | 42318 |
| 142 | Ga0495686_0041719 | 3300047472 | Bacteria | 2921 |
| 143 | Ga0495626_0003524 | 3300048091 | Bacteria | 10019 |
| 144 | Ga0496107_0000058 | 3300048910 | Bacteria | 54924 |
| 145 | Ga0496115_0000455 | 3300048918 | Bacteria | 32821 |
| 146 | Ga0496116_0040983 | 3300048919 | Bacteria | 3182 |
| 147 | Ga0496119_0018016 | 3300048922 | Bacteria | 5279 |
| 148 | Ga0496119_0069319 | 3300048922 | Unclassified | 2073 |
| 149 | Ga0496120_0005090 | 3300048923 | Bacteria | 10641 |
| 150 | Ga0496121_0000008 | 3300048924 | Bacteria | 843593 |
| 151 | Ga0496121_0000484 | 3300048924 | Bacteria | 77129 |
| 152 | Ga0496121_0058671 | 3300048924 | Bacteria | 3179 |
| 153 | Ga0496122_0000870 | 3300048925 | Bacteria | 56865 |
| 154 | Ga0496123_0000664 | 3300048926 | Bacteria | 56865 |
| 155 | Ga0496124_0002739 | 3300048927 | Bacteria | 22472 |
| 156 | Ga0496125_0120375 | 3300048928 | Bacteria | 1874 |
| 157 | Ga0496126_0026591 | 3300048929 | Bacteria | 5545 |
| 158 | Ga0496126_0030668 | 3300048929 | Bacteria | 5091 |
| 159 | Ga0495678_001439 | 3300049459 | Bacteria | 18729 |
| 160 | Ga0495682_0000936 | 3300049460 | Bacteria | 17697 |
| 161 | Ga0495682_0013280 | 3300049460 | Unclassified | 3138 |
| 162 | Ga0501267_000374 | 3300049764 | Bacteria | 3397 |
| 163 | Ga0501035_0002590 | 3300049822 | Bacteria | 17657 |
| 164 | Ga0501044_0270773 | 3300049823 | Bacteria | 1634 |
| 165 | nmdc:mga0k408_17443_c1 | 3300050493 | Bacteria | 2478 |
| 166 | nmdc:mga08x19_748_c1 | 3300050514 | Bacteria | 20763 |
| 167 | Ga0500572_000232 | 3300053111 | Bacteria | 19789 |
| 168 | Ga0500568_0023788 | 3300053139 | Bacteria | 2602 |
| 169 | Ga0500573_0000003 | 3300053140 | Bacteria | 355643 |
| 170 | Ga0500604_0029596 | 3300053151 | Bacteria | 1598 |
| 171 | Ga0500616_0000310 | 3300053153 | Bacteria | 70057 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300048928 | Ga0496125_0120375 | Ga0496125_0120375_507_1862 | 451 |
| 2 | 3300046520 | Ga0495637_0000187 | Ga0495637_0000187_908_2290 | 452 |
| 3 | 3300050514 | nmdc:mga08x19_748_c1 | nmdc:mga08x19_748_c1_4415_5818 | 458 |
| 4 | 3300048922 | Ga0496119_0069319 | Ga0496119_0069319_184_1719 | 467 |
| 5 | 3300053140 | Ga0500573_0000003 | Ga0500573_0000003_339230_340651 | 468 |
| 6 | iso_pu_bacteria | 2939674588 | 2939677253 | 471 |
| 7 | 3300025924 | Ga0207694_10000044 | Ga0207694_1000004490 | 473 |
| 8 | 3300048924 | Ga0496121_0000008 | Ga0496121_0000008_491698_493236 | 473 |
| 9 | 3300005406 | Ga0070703_10000125 | Ga0070703_1000012533 | 474 |
| 10 | 3300005441 | Ga0070700_100004522 | Ga0070700_1000045225 | 474 |
| 11 | 3300025885 | Ga0207653_10000208 | Ga0207653_100002085 | 474 |
| 12 | 3300026075 | Ga0207708_10003902 | Ga0207708_100039027 | 474 |
| 13 | 3300046506 | Ga0495583_0017554 | Ga0495583_0017554_803_2257 | 474 |
| 14 | 3300005329 | Ga0070683_100048993 | Ga0070683_1000489932 | 475 |
| 15 | 3300005535 | Ga0070684_100014666 | Ga0070684_1000146662 | 475 |
| 16 | 3300013307 | Ga0157372_10006723 | Ga0157372_100067239 | 475 |
| 17 | 3300025299 | Ga0209256_1009731 | Ga0209256_10097312 | 475 |
| 18 | 3300025944 | Ga0207661_10121364 | Ga0207661_101213642 | 475 |
| 19 | 3300044656 | Ga0466969_0003635 | Ga0466969_0003635_1084_2679 | 475 |
| 20 | 3300044684 | Ga0466966_0008571 | Ga0466966_0008571_4251_5846 | 475 |
| 21 | 3300044693 | Ga0466961_0001832 | Ga0466961_0001832_3373_4968 | 475 |
| 22 | 3300044842 | Ga0466957_0010782 | Ga0466957_0010782_195_1790 | 475 |
| 23 | 3300045049 | Ga0466959_0007071 | Ga0466959_0007071_1406_3001 | 475 |
| 24 | 3300045836 | Ga0466958_0004252 | Ga0466958_0004252_1050_2645 | 475 |
| 25 | 3300046501 | Ga0495607_0000745 | Ga0495607_0000745_25732_27192 | 475 |
| 26 | 3300005327 | Ga0070658_10003409 | Ga0070658_100034097 | 476 |
| 27 | 3300009011 | Ga0105251_10009777 | Ga0105251_100097772 | 476 |
| 28 | 3300009036 | Ga0105244_10010388 | Ga0105244_100103882 | 476 |
| 29 | 3300025728 | Ga0207655_1004139 | Ga0207655_10041395 | 476 |
| 30 | 3300025735 | Ga0207713_1007350 | Ga0207713_10073505 | 476 |
| 31 | 3300048922 | Ga0496119_0018016 | Ga0496119_0018016_3641_5101 | 477 |
| 32 | 3300048923 | Ga0496120_0005090 | Ga0496120_0005090_3641_5101 | 477 |
| 33 | 3300006914 | Ga0075436_100000184 | Ga0075436_10000018432 | 479 |
| 34 | 3300046500 | Ga0495596_0000359 | Ga0495596_0000359_7252_8778 | 479 |
| 35 | iso_pu_bacteria | 2842775625 | 2842777771 | 479 |
| 36 | iso_pu_bacteria | 2974307012 | 2974310329 | 479 |
| 37 | iso_pu_bacteria | 2984514374 | 2984514448 | 479 |
| 38 | 3300003771 | Ga0055526_1000015 | Ga0055526_1000015100 | 481 |
| 39 | 3300003773 | Ga0055537_1000053 | Ga0055537_100005324 | 481 |
| 40 | 3300003775 | Ga0055524_1000059 | Ga0055524_100005942 | 481 |
| 41 | 3300003784 | Ga0055534_1000017 | Ga0055534_1000017102 | 481 |
| 42 | 3300003790 | Ga0055528_1000008 | Ga0055528_1000008100 | 481 |
| 43 | 3300025263 | Ga0209565_1000001 | Ga0209565_1000001148 | 481 |
| 44 | 3300025273 | Ga0209673_1000001 | Ga0209673_1000001148 | 481 |
| 45 | 3300025291 | Ga0209675_1000001 | Ga0209675_10000012384 | 481 |
| 46 | 3300025295 | Ga0209564_1000001 | Ga0209564_10000012546 | 481 |
| 47 | 3300025299 | Ga0209256_1000006 | Ga0209256_1000006982 | 481 |
| 48 | 3300049822 | Ga0501035_0002590 | Ga0501035_0002590_9718_11220 | 481 |
| 49 | 3300053139 | Ga0500568_0023788 | Ga0500568_0023788_1098_2591 | 483 |
| 50 | 3300044712 | Ga0453684_0113144 | Ga0453684_0113144_1224_2750 | 485 |
| 51 | 3300005345 | Ga0070692_10001069 | Ga0070692_100010693 | 486 |
| 52 | 3300046519 | Ga0495632_0015041 | Ga0495632_0015041_33_1517 | 487 |
| 53 | iso_pu_bacteria | 8056148874 | 8056150607 | 487 |
| 54 | iso_pu_bacteria | 2643221573 | 2643881325 | 488 |
| 55 | 3300001989 | JGI24739J22299_10000412 | JGI24739J22299_100004123 | 489 |
| 56 | 3300046520 | Ga0495637_0022610 | Ga0495637_0022610_257_1747 | 489 |
| 57 | iso_pu_bacteria | 2511231019 | 2511343448 | 489 |
| 58 | iso_pu_bacteria | 2841734538 | 2841739771 | 489 |
| 59 | iso_pu_bacteria | 2856342000 | 2856342359 | 489 |
| 60 | iso_pu_bacteria | 2871435913 | 2871436778 | 489 |
| 61 | iso_pu_bacteria | 2996386984 | 2996390522 | 489 |
| 62 | iso_pu_bacteria | 8001845381 | 8001845441 | 489 |
| 63 | 3300030521 | Ga0307511_10001484 | Ga0307511_100014849 | 490 |
| 64 | 3300049823 | Ga0501044_0270773 | Ga0501044_0270773_70_1572 | 490 |
| 65 | iso_pu_bacteria | 2513237086 | 2513587397 | 490 |
| 66 | iso_pu_bacteria | 2600255279 | 2601612497 | 490 |
| 67 | iso_pu_bacteria | 2600255308 | 2601749386 | 490 |
| 68 | iso_pu_bacteria | 2643221599 | 2644008169 | 490 |
| 69 | iso_pu_bacteria | 2775506901 | 2776260502 | 490 |
| 70 | iso_pu_bacteria | 2791355123 | 2792750305 | 490 |
| 71 | iso_pu_bacteria | 2791355264 | 2793345184 | 490 |
| 72 | iso_pu_bacteria | 2791355265 | 2793354080 | 490 |
| 73 | iso_pu_bacteria | 2937016420 | 2937022121 | 490 |
| 74 | iso_pu_bacteria | 2957484790 | 2957491054 | 490 |
| 75 | 3300005471 | Ga0070698_100005960 | Ga0070698_1000059602 | 491 |
| 76 | 3300005518 | Ga0070699_100056262 | Ga0070699_1000562622 | 491 |
| 77 | 3300042013 | Ga0439456_008573 | Ga0439456_008573_528_2090 | 491 |
| 78 | 3300046694 | Ga0495649_0000436 | Ga0495649_0000436_18347_19843 | 491 |
| 79 | 3300048918 | Ga0496115_0000455 | Ga0496115_0000455_1584_3080 | 491 |
| 80 | 3300048929 | Ga0496126_0026591 | Ga0496126_0026591_3087_4583 | 491 |
| 81 | iso_pu_bacteria | 3003930520 | 3003934553 | 491 |
| 82 | iso_pu_bacteria | 8005682033 | 8005684646 | 491 |
| 83 | 3300003781 | Ga0055536_1000017 | Ga0055536_1000017153 | 492 |
| 84 | 3300003791 | Ga0055530_10000032 | Ga0055530_1000003261 | 492 |
| 85 | 3300005843 | Ga0068860_100000032 | Ga0068860_100000032118 | 492 |
| 86 | 3300009148 | Ga0105243_10004165 | Ga0105243_100041655 | 492 |
| 87 | 3300015261 | Ga0182006_1000017 | Ga0182006_1000017197 | 492 |
| 88 | 3300025261 | Ga0209233_1000548 | Ga0209233_100054817 | 492 |
| 89 | 3300025292 | Ga0209676_1000107 | Ga0209676_100010760 | 492 |
| 90 | 3300025298 | Ga0209050_1000056 | Ga0209050_1000056293 | 492 |
| 91 | 3300025298 | Ga0209050_1000088 | Ga0209050_1000088209 | 492 |
| 92 | 3300025304 | Ga0209257_1003229 | Ga0209257_10032296 | 492 |
| 93 | 3300025935 | Ga0207709_10002177 | Ga0207709_100021778 | 492 |
| 94 | 3300028381 | Ga0268264_10000045 | Ga0268264_10000045235 | 492 |
| 95 | 3300044684 | Ga0466966_0004596 | Ga0466966_0004596_3699_5414 | 492 |
| 96 | 3300046519 | Ga0495632_0000023 | Ga0495632_0000023_89147_90634 | 492 |
| 97 | 3300046525 | Ga0495663_0000019 | Ga0495663_0000019_89147_90634 | 492 |
| 98 | 3300046558 | Ga0495633_0000282 | Ga0495633_0000282_36270_37757 | 492 |
| 99 | 3300046660 | Ga0495625_0048976 | Ga0495625_0048976_591_2078 | 492 |
| 100 | 3300046665 | Ga0495661_0001867 | Ga0495661_0001867_4193_5695 | 492 |
| 101 | 3300047472 | Ga0495686_0041719 | Ga0495686_0041719_27_1514 | 492 |
| 102 | 3300048910 | Ga0496107_0000058 | Ga0496107_0000058_8537_10039 | 492 |
| 103 | 3300048924 | Ga0496121_0000484 | Ga0496121_0000484_36896_38398 | 492 |
| 104 | 3300005327 | Ga0070658_10000149 | Ga0070658_1000014923 | 493 |
| 105 | 3300005366 | Ga0070659_100003799 | Ga0070659_1000037996 | 493 |
| 106 | 3300005563 | Ga0068855_100076646 | Ga0068855_1000766465 | 493 |
| 107 | 3300006058 | Ga0075432_10000527 | Ga0075432_1000052711 | 493 |
| 108 | 3300009011 | Ga0105251_10012643 | Ga0105251_100126433 | 493 |
| 109 | 3300009036 | Ga0105244_10047013 | Ga0105244_100470132 | 493 |
| 110 | 3300009092 | Ga0105250_10004561 | Ga0105250_100045615 | 493 |
| 111 | 3300009551 | Ga0105238_10000687 | Ga0105238_1000068728 | 493 |
| 112 | 3300010375 | Ga0105239_10000028 | Ga0105239_1000002826 | 493 |
| 113 | 3300012498 | Ga0157345_1000030 | Ga0157345_100003033 | 493 |
| 114 | 3300013102 | Ga0157371_10013220 | Ga0157371_100132204 | 493 |
| 115 | 3300013104 | Ga0157370_10009082 | Ga0157370_100090826 | 493 |
| 116 | 3300013104 | Ga0157370_10013018 | Ga0157370_100130182 | 493 |
| 117 | 3300014497 | Ga0182008_10000657 | Ga0182008_100006577 | 493 |
| 118 | 3300014497 | Ga0182008_10002228 | Ga0182008_100022283 | 493 |
| 119 | 3300014497 | Ga0182008_10005591 | Ga0182008_100055913 | 493 |
| 120 | 3300015265 | Ga0182005_1012108 | Ga0182005_10121083 | 493 |
| 121 | 3300025728 | Ga0207655_1000782 | Ga0207655_10007822 | 493 |
| 122 | 3300025735 | Ga0207713_1028248 | Ga0207713_10282482 | 493 |
| 123 | 3300025909 | Ga0207705_10000022 | Ga0207705_10000022137 | 493 |
| 124 | 3300025932 | Ga0207690_10002255 | Ga0207690_100022558 | 493 |
| 125 | 3300025949 | Ga0207667_10150140 | Ga0207667_101501403 | 493 |
| 126 | 3300027907 | Ga0207428_10005655 | Ga0207428_100056553 | 493 |
| 127 | 3300037418 | Ga0395900_0002591 | Ga0395900_0002591_9828_11333 | 493 |
| 128 | 3300037471 | Ga0395905_0001329 | Ga0395905_0001329_16476_17981 | 493 |
| 129 | 3300038443 | Ga0395901_0035631 | Ga0395901_0035631_2555_4060 | 493 |
| 130 | 3300044693 | Ga0466961_0000730 | Ga0466961_0000730_18055_19626 | 493 |
| 131 | 3300046458 | Ga0495591_002312 | Ga0495591_002312_8765_10270 | 493 |
| 132 | 3300046491 | Ga0495584_0000714 | Ga0495584_0000714_5602_7107 | 493 |
| 133 | 3300046507 | Ga0495606_0005401 | Ga0495606_0005401_834_2339 | 493 |
| 134 | 3300046507 | Ga0495606_0005845 | Ga0495606_0005845_783_2288 | 493 |
| 135 | 3300046530 | Ga0495654_0002736 | Ga0495654_0002736_813_2318 | 493 |
| 136 | 3300046794 | Ga0495589_0001606 | Ga0495589_0001606_10637_12142 | 493 |
| 137 | 3300047323 | Ga0495683_0001988 | Ga0495683_0001988_10526_12031 | 493 |
| 138 | 3300048091 | Ga0495626_0003524 | Ga0495626_0003524_7976_9481 | 493 |
| 139 | 3300048919 | Ga0496116_0040983 | Ga0496116_0040983_429_1934 | 493 |
| 140 | 3300049460 | Ga0495682_0000936 | Ga0495682_0000936_2815_4320 | 493 |
| 141 | 3300049460 | Ga0495682_0013280 | Ga0495682_0013280_1052_2557 | 493 |
| 142 | 3300049764 | Ga0501267_000374 | Ga0501267_000374_385_1881 | 493 |
| 143 | iso_pu_bacteria | 2643221541 | 2643731458 | 493 |
| 144 | iso_pu_bacteria | 2643221606 | 2644042214 | 493 |
| 145 | iso_pu_bacteria | 2643221671 | 2644394144 | 493 |
| 146 | iso_pu_bacteria | 2909399089 | 2909400067 | 493 |
| 147 | 3300003323 | rootH1_10000282 | rootH1_1000028218 | 494 |
| 148 | 3300003323 | rootH1_10020809 | rootH1_1002080918 | 494 |
| 149 | 3300003323 | rootH1_10064175 | rootH1_100641756 | 494 |
| 150 | 3300003791 | Ga0055530_10000876 | Ga0055530_100008763 | 494 |
| 151 | 3300003794 | Ga0055531_10001218 | Ga0055531_100012187 | 494 |
| 152 | 3300005339 | Ga0070660_100146895 | Ga0070660_1001468952 | 494 |
| 153 | 3300005366 | Ga0070659_100001312 | Ga0070659_10000131212 | 494 |
| 154 | 3300006948 | Ga0099826_10001723 | Ga0099826_100017236 | 494 |
| 155 | 3300009093 | Ga0105240_10022121 | Ga0105240_100221217 | 494 |
| 156 | 3300025256 | Ga0209759_1004682 | Ga0209759_10046823 | 494 |
| 157 | 3300025298 | Ga0209050_1000315 | Ga0209050_100031531 | 494 |
| 158 | 3300025299 | Ga0209256_1000997 | Ga0209256_100099716 | 494 |
| 159 | 3300025303 | Ga0209051_1000022 | Ga0209051_1000022106 | 494 |
| 160 | 3300025304 | Ga0209257_1000030 | Ga0209257_1000030304 | 494 |
| 161 | 3300025913 | Ga0207695_10001687 | Ga0207695_100016874 | 494 |
| 162 | 3300025932 | Ga0207690_10001022 | Ga0207690_100010226 | 494 |
| 163 | 3300027666 | Ga0209282_1005544 | Ga0209282_10055446 | 494 |
| 164 | 3300028794 | Ga0307515_10046765 | Ga0307515_100467652 | 494 |
| 165 | 3300031344 | Ga0265316_10002674 | Ga0265316_1000267411 | 494 |
| 166 | 3300038443 | Ga0395901_0009149 | Ga0395901_0009149_7615_9120 | 494 |
| 167 | 3300042876 | Ga0451577_0016908 | Ga0451577_0016908_1330_2832 | 494 |
| 168 | 3300044712 | Ga0453684_0189316 | Ga0453684_0189316_107_1609 | 494 |
| 169 | 3300045051 | Ga0451576_0022492 | Ga0451576_0022492_3997_5499 | 494 |
| 170 | 3300046507 | Ga0495606_0007674 | Ga0495606_0007674_3027_4535 | 494 |
| 171 | 3300046524 | Ga0495648_0041075 | Ga0495648_0041075_468_1973 | 494 |
| 172 | 3300046660 | Ga0495625_0000116 | Ga0495625_0000116_115239_116744 | 494 |
| 173 | 3300047320 | Ga0495672_0013664 | Ga0495672_0013664_2670_4169 | 494 |
| 174 | 3300048924 | Ga0496121_0058671 | Ga0496121_0058671_98_1597 | 494 |
| 175 | 3300048925 | Ga0496122_0000870 | Ga0496122_0000870_23558_25057 | 494 |
| 176 | 3300048926 | Ga0496123_0000664 | Ga0496123_0000664_23558_25057 | 494 |
| 177 | 3300049459 | Ga0495678_001439 | Ga0495678_001439_10239_11741 | 494 |
| 178 | 3300050493 | nmdc:mga0k408_17443_c1 | nmdc:mga0k408_17443_c1_321_1826 | 494 |
| 179 | 3300053111 | Ga0500572_000232 | Ga0500572_000232_2245_3747 | 494 |
| 180 | iso_pu_bacteria | 8018127388 | 8018130510 | 494 |
| 181 | 3300003775 | Ga0055524_1002695 | Ga0055524_10026952 | 495 |
| 182 | 3300003790 | Ga0055528_1000041 | Ga0055528_100004110 | 495 |
| 183 | 3300025273 | Ga0209673_1000225 | Ga0209673_10002259 | 495 |
| 184 | 3300025299 | Ga0209256_1000229 | Ga0209256_10002299 | 495 |
| 185 | 3300046453 | Ga0495627_000324 | Ga0495627_000324_9409_10923 | 495 |
| 186 | 3300046660 | Ga0495625_0000445 | Ga0495625_0000445_28558_30072 | 495 |
| 187 | 3300047472 | Ga0495686_0000768 | Ga0495686_0000768_14175_15689 | 495 |
| 188 | 3300053153 | Ga0500616_0000310 | Ga0500616_0000310_53769_55283 | 495 |
| 189 | 2162886007 | SwRhRL2b_contig_796017 | SwRhRL2b_0280.00001640 | 496 |
| 190 | 3300005289 | Ga0065704_10071090 | Ga0065704_100710905 | 496 |
| 191 | 3300005548 | Ga0070665_100000038 | Ga0070665_100000038269 | 496 |
| 192 | 3300006237 | Ga0097621_100000191 | Ga0097621_10000019126 | 496 |
| 193 | 3300006358 | Ga0068871_100000314 | Ga0068871_10000031417 | 496 |
| 194 | 3300028379 | Ga0268266_10000176 | Ga0268266_1000017677 | 496 |
| 195 | 3300028381 | Ga0268264_10068971 | Ga0268264_100689713 | 496 |
| 196 | 3300031251 | Ga0265327_10001051 | Ga0265327_1000105116 | 496 |
| 197 | 3300048927 | Ga0496124_0002739 | Ga0496124_0002739_1880_3370 | 496 |
| 198 | 3300048929 | Ga0496126_0030668 | Ga0496126_0030668_1254_2744 | 496 |
| 199 | 3300053151 | Ga0500604_0029596 | Ga0500604_0029596_52_1557 | 496 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3g7u-assembly1.cif.gz_A | crystal structure of putative dna modification methyltransferase encoded within prophage cp-933r (e.coli) | 0.8011 | 19 | 478 |
| 3g7u-assembly1.cif.gz_A | crystal structure of putative dna modification methyltransferase encoded within prophage cp-933r (e.coli) | 0.7925 | 19 | 478 |
| 2z6u-assembly1.cif.gz_A | ternary structure of the glu119ala m.hhai, c5-cytosine dna methyltransferase, with unmodified dna and adohcy | 0.7837 | 19 | 478 |
| 1fjx-assembly1.cif.gz_A | structure of ternary complex of hhai methyltransferase mutant (t250g) in complex with dna and adohcy | 0.7674 | 19 | 478 |
| 1svu-assembly1.cif.gz_A | structure of the q237w mutant of hhai dna methyltransferase: an insight into protein-protein interactions | 0.764 | 19 | 478 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_K7L7D0_19_92_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8854 | 145 | 205 | 3.40.50.150 |
| 1svuA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8335 | 19 | 232 | 3.40.50.150 |
| 3g7uA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8332 | 19 | 212 | 3.40.50.150 |
| af_Q9VKB3_3_179_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8108 | 19 | 213 | 3.40.50.150 |
| af_P40999_6_178_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8006 | 18 | 204 | 3.40.50.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1K1YRM4-F1-model_v4 | deleted | 0.9541 | 145 | 495 |
|
| AF-A0A1K1YRM4-F1-model_v4 | deleted | 0.941 | 145 | 495 |
|
| AF-A0A3S2BD62-F1-model_v4 | deleted | 0.9394 | 306 | 483 |
|
| AF-D1CSC3-F1-model_v4 | DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) | 0.9172 | 120 | 254 |
GO:0003677
GO:0009307 GO:0032259 GO:0044027 GO:0051719 GO:0051720 |
| AF-C5B578-F1-model_v4 | DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) | 0.9164 | 18 | 483 |
GO:0003677
GO:0009307 GO:0032259 GO:0044027 GO:0051719 GO:0051720 |
Predicted Structure (AlphaFold2)
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