Scaffold Information

Sample ID 3300005548
Scaffold Ga0070665_100000025
Sample Name Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG
Length 367488
Fam Num 76
Taxonomy Bacteria
Environment Rhizosphere
Lineage Bacteria;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. KC8

CRISPR Details

Start Coordinate: 189522 End Coordinate: 189668
Position Repeat Spacer
189522 GTGCTGACGCCGCCCGTCGA CGTGCTGACGCCTCCAGTTGAGCTGCTGACGCCTCCGGTCGAA
189585 GTGCTGACGCCTCCCGTCGA GCTACTGACTCCGCCTGTCGAGGTGCTAACGCCCCCAGTCGAG
189648 GTGCTGACACCTCCCGTCGA -

PFAM Info

PFAM Domain Meaning GOTerms

Scaffold Families

F377288 , F378459 , F396753 , F398328 , F410250 , F426109 , F430148 , F430979 , F434588 , F436601 , F440371 , F445087 , F445128 , F445372 , F446789 , F454752 , F455648 , F457143 , F458069 , F459900 , F460667 , F464073 , F465236 , F469769 , F470236 , F470392 , F472241 , F473019 , F477468 , F479001 , F479368 , F479939 , F481811 , F482862 , F484471 , F484707 , F484828 , F486745 , F486840 , F487175 , F488482 , F488904 , F488936 , F489299 , F489983 , F490702 , F491835 , F492248 , F492813 , F493456 , F493508 , F494026 , F494275 , F494822 , F495420 , F495795 , F495928 , F495932 , F495942 , F496055 , F496299 , F496527 , F496586 , F496766 , F496806 , F496919 , F496978 , F497016 , F497164 , F497195 , F497215 , F497316 , F497364 , F497433 , F497475 , F497491