F430148

General Info

Members Datasets Scaffolds Average Seq Length
385 208 362 461

Family's Representative Sequence

Representative Sequence 3300005617|Ga0068859_100118690|Ga0068859_1001186902
Length 511
Sequence MAIDPRPPARRRHFVGERLRALRSRAALGQAAMAARLGLSVSYLSQLENDDRPLTPSVTARLAATFPFDWRIFDEDDADRRASGLRDAMADPLFAGPHPTPETLHRAAEQQPQLADRFIALHAAWRRAEERLQIVDDAISTGVQGGDRLPWEEVRDWFHEAGNYIDPIDRAAEALAGELANLPSSRRKPGPINTEFSGDVEVMGPGFPRDDGRRALENGIVDDAMIQRLAGRHGIRIVAPSEDAPLRRFDRAAGTLAIDRALPPESRRFLLALQLAAIELAEPIAAVTANARLASEESRAIVAAGLANYAAGALLMPYATFRETARGLRHDIDRLRQIFGVSFEQACHRLSTLQRPGLRGLPFFFCRVDMAGNITKRHSATRLQFARFGGACPLWIVHEAVAIPDRILVQLAETPDGVRYVSMAKGLVKPSGSYARAPRRYAVALGCEAEHAAEFIYADGLDLGSKTAATPIGISCRQCPRDDCDQRAFPPADRDIVVDPDVRDVVPYRVV

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
3 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
4 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
5 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
6 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
7 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
8 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
9 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
10 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
11 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
12 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
13 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
14 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
15 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
16 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
17 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
18 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
19 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
20 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
21 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
22 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
23 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
24 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
25 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
26 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
27 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
28 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
29 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
30 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
31 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
32 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
33 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
34 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
35 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
36 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
37 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
38 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
39 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
40 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
41 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
42 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
43 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
44 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
45 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
46 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
47 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
48 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
49 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
50 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
51 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
52 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
53 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
54 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
55 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
56 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
57 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
58 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
59 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
60 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
61 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
62 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
63 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
64 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
65 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
66 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
67 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
68 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
69 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
70 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
71 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
72 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
73 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
74 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
75 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
76 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
77 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
78 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
79 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
80 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
81 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
82 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
83 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
84 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
85 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
86 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
87 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
88 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
89 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
90 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
91 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
92 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
94 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
95 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
96 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
97 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
98 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
99 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
101 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
102 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
103 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
105 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
142 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
143 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
144 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
145 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
146 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
147 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
148 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
149 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
150 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
151 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
152 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
153 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
154 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
155 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
156 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
157 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
158 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
159 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
160 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
161 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
162 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
163 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
164 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
165 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
166 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
167 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
168 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
169 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
170 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
171 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
172 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
173 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
174 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
175 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
176 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
177 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
178 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
179 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
180 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
181 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
182 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
183 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
184 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
185 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
186 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
187 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
188 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
189 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
191 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
193 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
194 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
195 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
196 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
197 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
198 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
199 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
200 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
201 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
202 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
203 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
204 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
205 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
206 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
207 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
208 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.03
Metatranscriptomes 0
Isolates 5.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.29
Nodule 0
Rhizoplane 4.42
Rhizosphere 69.61
Stem 0
Stem Tuber 0
Unclassified 11.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1463083 2162886007 Bacteria 11559
2 JGI24736J21556_1000046 3300001904 Bacteria 19920
3 JGI24752J21851_1000149 3300001976 Bacteria 9512
4 JGI24752J21851_1000755 3300001976 Bacteria 4334
5 JGI24740J21852_10008445 3300001979 Bacteria 4103
6 JGI24739J22299_10005024 3300001989 Bacteria 5036
7 JGI24739J22299_10005431 3300001989 Bacteria 4843
8 JGI24737J22298_10004028 3300001990 Bacteria 5136
9 JGI24737J22298_10009464 3300001990 Bacteria 3237
10 JGI24735J21928_10012279 3300002067 Bacteria 2709
11 JGI24750J21931_1000329 3300002070 Bacteria 8091
12 JGI24748J21848_1000015 3300002074 Bacteria 143883
13 JGI24748J21848_1000581 3300002074 Bacteria 3935
14 JGI24738J21930_10001038 3300002075 Bacteria 7919
15 JGI24749J21850_1000241 3300002076 Bacteria 8543
16 JGI24749J21850_1001008 3300002076 Bacteria 4000
17 JGI24034J26672_10000006 3300002239 Bacteria 294495
18 JGI24751J29686_10000672 3300002459 Bacteria 8533
19 JGI24751J29686_10001134 3300002459 Bacteria 5728
20 JGI25150J39212_1000020 3300002774 Bacteria 134928
21 JGI25165J46597_1000104 3300003214 Bacteria 152363
22 JGI25153J46596_10000017 3300003215 Bacteria 274325
23 JGI25153J46596_10010560 3300003215 Bacteria 4165
24 rootL2_10266176 3300003322 Bacteria 1966
25 Ga0055526_1000046 3300003771 Bacteria 120614
26 Ga0055524_1000169 3300003775 Bacteria 74567
27 Ga0055536_1010572 3300003781 Bacteria 3641
28 Ga0055530_10000359 3300003791 Bacteria 41160
29 Ga0055530_10014495 3300003791 Bacteria 2623
30 Ga0055530_10015163 3300003791 Bacteria 2533
31 Ga0055540_1003050 3300003792 Bacteria 8340
32 Ga0055531_10000601 3300003794 Bacteria 31249
33 Ga0055531_10006441 3300003794 Bacteria 6666
34 Ga0065165_1002077 3300005262 Bacteria 18400
35 Ga0065165_1006291 3300005262 Bacteria 6297
36 Ga0065165_1017430 3300005262 Bacteria 2647
37 Ga0065704_10000711 3300005289 Bacteria 15142
38 Ga0065707_10082429 3300005295 Bacteria 15284
39 Ga0065707_10093195 3300005295 Bacteria 3661
40 Ga0070683_100096273 3300005329 Bacteria 2784
41 Ga0070690_100000012 3300005330 Bacteria 91852
42 Ga0070670_100000030 3300005331 Bacteria 164211
43 Ga0070670_100000047 3300005331 Bacteria 136625
44 Ga0070670_100000570 3300005331 Bacteria 29190
45 Ga0070670_100038475 3300005331 Bacteria 4113
46 Ga0070666_10000014 3300005335 Bacteria 224479
47 Ga0070666_10000068 3300005335 Bacteria 76194
48 Ga0070668_100000001 3300005347 Bacteria 275905
49 Ga0070668_100003628 3300005347 Bacteria 11377
50 Ga0070668_100021018 3300005347 Bacteria 4931
51 Ga0070668_100046696 3300005347 Bacteria 3327
52 Ga0070668_100059804 3300005347 Bacteria 2950
53 Ga0070669_100000018 3300005353 Bacteria 195789
54 Ga0070669_100000039 3300005353 Bacteria 135033
55 Ga0070669_100000072 3300005353 Bacteria 99184
56 Ga0070669_100000351 3300005353 Bacteria 35974
57 Ga0070671_100000011 3300005355 Bacteria 202057
58 Ga0070671_100000106 3300005355 Bacteria 53385
59 Ga0070671_100003716 3300005355 Bacteria 11974
60 Ga0070671_100007724 3300005355 Bacteria 8593
61 Ga0070688_100010250 3300005365 Bacteria 5162
62 Ga0070667_100000006 3300005367 Bacteria 336732
63 Ga0070667_100000161 3300005367 Bacteria 83551
64 Ga0070667_100000205 3300005367 Bacteria 69657
65 Ga0070667_100001386 3300005367 Bacteria 21706
66 Ga0070667_100013668 3300005367 Bacteria 6709
67 Ga0070667_100031850 3300005367 Bacteria 4395
68 Ga0070685_10000307 3300005466 Bacteria 30756
69 Ga0068853_100121776 3300005539 Bacteria 2328
70 Ga0070686_100000002 3300005544 Bacteria 336303
71 Ga0070665_100000025 3300005548 Bacteria 367488
72 Ga0070665_100001278 3300005548 Bacteria 30172
73 Ga0068857_100006205 3300005577 Bacteria 10220
74 Ga0068857_100156590 3300005577 Bacteria 2066
75 Ga0068857_100161036 3300005577 Bacteria 2036
76 Ga0068854_100019832 3300005578 Bacteria 4538
77 Ga0068854_100057020 3300005578 Bacteria 2817
78 Ga0068852_100261397 3300005616 Bacteria 1662
79 Ga0068859_100005635 3300005617 Bacteria 12764
80 Ga0068859_100053403 3300005617 Bacteria 4064
81 Ga0068859_100095750 3300005617 Bacteria 3021
82 Ga0068859_100118690 3300005617 Bacteria 2711
83 Ga0068864_100000041 3300005618 Bacteria 165878
84 Ga0068864_100000051 3300005618 Bacteria 136621
85 Ga0068864_100001740 3300005618 Bacteria 17896
86 Ga0068864_100004444 3300005618 Bacteria 11523
87 Ga0068861_100000143 3300005719 Bacteria 36538
88 Ga0068861_100001849 3300005719 Bacteria 13615
89 Ga0068861_100012322 3300005719 Bacteria 5964
90 Ga0068863_100000035 3300005841 Bacteria 165877
91 Ga0068863_100000270 3300005841 Bacteria 54081
92 Ga0068863_100005033 3300005841 Bacteria 13031
93 Ga0068863_100055519 3300005841 Bacteria 3750
94 Ga0068858_100000174 3300005842 Bacteria 68247
95 Ga0068858_100001967 3300005842 Bacteria 20985
96 Ga0068858_100003131 3300005842 Bacteria 16561
97 Ga0068858_100146310 3300005842 Bacteria 2219
98 Ga0068860_100000001 3300005843 Bacteria 703043
99 Ga0068860_100000120 3300005843 Bacteria 125823
100 Ga0068860_100000181 3300005843 Bacteria 101627
101 Ga0068860_100016052 3300005843 Bacteria 7305
102 Ga0068862_100000036 3300005844 Bacteria 173453
103 Ga0068862_100000042 3300005844 Bacteria 165084
104 Ga0068862_100000048 3300005844 Bacteria 150043
105 Ga0068862_100000543 3300005844 Bacteria 39504
106 Ga0068862_100000702 3300005844 Bacteria 34174
107 Ga0068862_100001801 3300005844 Bacteria 19394
108 Ga0068862_100088421 3300005844 Bacteria 2695
109 Ga0068862_100092960 3300005844 Bacteria 2630
110 Ga0081455_10005153 3300005937 Bacteria 14389
111 Ga0075362_10006133 3300006177 Bacteria 4457
112 Ga0097620_100005636 3300006931 Bacteria 12764
113 Ga0097620_100053404 3300006931 Bacteria 4064
114 Ga0097620_100095750 3300006931 Bacteria 3021
115 Ga0097620_100118684 3300006931 Bacteria 2711
116 Ga0105251_10002360 3300009011 Bacteria 14927
117 Ga0105250_10024859 3300009092 Bacteria 2414
118 Ga0105245_10001185 3300009098 Bacteria 23603
119 Ga0105247_10010085 3300009101 Bacteria 5724
120 Ga0105247_10011827 3300009101 Bacteria 5248
121 Ga0105247_10027188 3300009101 Bacteria 3460
122 Ga0105248_10000045 3300009177 Bacteria 165909
123 Ga0105248_10000662 3300009177 Bacteria 39143
124 Ga0105248_10014015 3300009177 Bacteria 8821
125 Ga0105248_10026598 3300009177 Bacteria 6435
126 Ga0105248_10053690 3300009177 Bacteria 4520
127 Ga0105248_10121858 3300009177 Bacteria 2942
128 Ga0105248_10124255 3300009177 Bacteria 2911
129 Ga0105248_10167222 3300009177 Bacteria 2478
130 Ga0105237_10009149 3300009545 Bacteria 10641
131 Ga0105238_10025192 3300009551 Bacteria 6063
132 Ga0105249_10000005 3300009553 Bacteria 362467
133 Ga0105249_10000055 3300009553 Bacteria 161674
134 Ga0105249_10000097 3300009553 Bacteria 120886
135 Ga0105249_10003294 3300009553 Bacteria 13998
136 Ga0105249_10107496 3300009553 Bacteria 2633
137 Ga0157326_1000464 3300012513 Bacteria 4839
138 Ga0157370_10017528 3300013104 Bacteria 7225
139 Ga0157369_10026523 3300013105 Bacteria 6426
140 Ga0163162_10003309 3300013306 Bacteria 15417
141 Ga0163162_10017347 3300013306 Bacteria 7043
142 Ga0163162_10044927 3300013306 Bacteria 4426
143 Ga0163162_10060544 3300013306 Bacteria 3822
144 Ga0163163_10163614 3300014325 Bacteria 2271
145 Ga0157380_10000276 3300014326 Bacteria 30816
146 Ga0157380_10000446 3300014326 Bacteria 25250
147 Ga0157380_10002141 3300014326 Bacteria 13253
148 Ga0157379_10055748 3300014968 Bacteria 3531
149 Ga0163161_10000509 3300017792 Bacteria 31722
150 Ga0163161_10082662 3300017792 Bacteria 2366
151 Ga0207672_1000730 3300025223 Bacteria 3661
152 Ga0207425_1000022 3300025245 Bacteria 355305
153 Ga0209129_1001976 3300025258 Bacteria 10673
154 Ga0209233_1000164 3300025261 Bacteria 152430
155 Ga0209565_1000012 3300025263 Bacteria 606500
156 Ga0209565_1000903 3300025263 Bacteria 16021
157 Ga0209673_1004325 3300025273 Bacteria 7664
158 Ga0209673_1033738 3300025273 Bacteria 1556
159 Ga0209675_1006619 3300025291 Bacteria 4612
160 Ga0209676_1013117 3300025292 Bacteria 3204
161 Ga0209025_1000318 3300025294 Bacteria 107348
162 Ga0209564_1000277 3300025295 Bacteria 105818
163 Ga0209758_1000004 3300025297 Bacteria 1375322
164 Ga0209758_1022745 3300025297 Bacteria 2860
165 Ga0209050_1000001 3300025298 Bacteria 3563507
166 Ga0209050_1000010 3300025298 Bacteria 980454
167 Ga0209050_1007642 3300025298 Bacteria 5993
168 Ga0209256_1000012 3300025299 Bacteria 790371
169 Ga0209051_1000246 3300025303 Bacteria 91170
170 Ga0209257_1000009 3300025304 Bacteria 1205047
171 Ga0209257_1000765 3300025304 Bacteria 47912
172 Ga0209257_1000934 3300025304 Bacteria 40351
173 Ga0209257_1001273 3300025304 Bacteria 30856
174 Ga0207697_10000184 3300025315 Bacteria 32509
175 Ga0207656_10004662 3300025321 Bacteria 4806
176 Ga0207696_1001478 3300025711 Bacteria 12716
177 Ga0207713_1001756 3300025735 Bacteria 16639
178 Ga0207710_10009607 3300025900 Bacteria 4064
179 Ga0207680_10000004 3300025903 Bacteria 827324
180 Ga0207680_10009699 3300025903 Bacteria 4788
181 Ga0207654_10005166 3300025911 Bacteria 6585
182 Ga0207695_10015394 3300025913 Bacteria 9005
183 Ga0207671_10001406 3300025914 Bacteria 28034
184 Ga0207681_10000008 3300025923 Bacteria 414329
185 Ga0207681_10000038 3300025923 Bacteria 153694
186 Ga0207681_10000061 3300025923 Bacteria 102257
187 Ga0207681_10000144 3300025923 Bacteria 59200
188 Ga0207694_10005859 3300025924 Bacteria 9420
189 Ga0207694_10013633 3300025924 Bacteria 6126
190 Ga0207694_10140733 3300025924 Bacteria 1940
191 Ga0207650_10000038 3300025925 Bacteria 206081
192 Ga0207650_10000111 3300025925 Bacteria 107416
193 Ga0207650_10001822 3300025925 Bacteria 15074
194 Ga0207644_10000006 3300025931 Bacteria 408793
195 Ga0207644_10000047 3300025931 Bacteria 103158
196 Ga0207644_10012870 3300025931 Bacteria 5564
197 Ga0207706_10042214 3300025933 Bacteria 4043
198 Ga0207711_10000027 3300025941 Bacteria 236548
199 Ga0207711_10000254 3300025941 Bacteria 57648
200 Ga0207711_10000990 3300025941 Bacteria 27231
201 Ga0207711_10003533 3300025941 Bacteria 13532
202 Ga0207711_10012391 3300025941 Bacteria 7087
203 Ga0207711_10126241 3300025941 Bacteria 2289
204 Ga0207711_10180788 3300025941 Bacteria 1918
205 Ga0207667_10048558 3300025949 Bacteria 4487
206 Ga0207651_10125519 3300025960 Bacteria 1955
207 Ga0207712_10000001 3300025961 Bacteria 750309
208 Ga0207712_10000074 3300025961 Bacteria 120822
209 Ga0207712_10000131 3300025961 Bacteria 79015
210 Ga0207712_10004749 3300025961 Bacteria 8588
211 Ga0207668_10000009 3300025972 Bacteria 188071
212 Ga0207668_10000806 3300025972 Bacteria 19192
213 Ga0207668_10002503 3300025972 Bacteria 10728
214 Ga0207668_10006305 3300025972 Bacteria 7011
215 Ga0207640_10000606 3300025981 Bacteria 21215
216 Ga0207640_10037682 3300025981 Bacteria 3045
217 Ga0207640_10048023 3300025981 Bacteria 2757
218 Ga0207658_10000010 3300025986 Bacteria 240224
219 Ga0207658_10000109 3300025986 Bacteria 89979
220 Ga0207658_10000216 3300025986 Bacteria 60563
221 Ga0207658_10000839 3300025986 Bacteria 25661
222 Ga0207658_10001350 3300025986 Bacteria 19190
223 Ga0207658_10011258 3300025986 Bacteria 6094
224 Ga0207703_10000142 3300026035 Bacteria 84567
225 Ga0207703_10001087 3300026035 Bacteria 25874
226 Ga0207703_10002458 3300026035 Bacteria 16068
227 Ga0207703_10038649 3300026035 Bacteria 3810
228 Ga0207639_10078564 3300026041 Bacteria 2605
229 Ga0207678_10062804 3300026067 Bacteria 3192
230 Ga0207702_10008772 3300026078 Bacteria 8523
231 Ga0207641_10000033 3300026088 Bacteria 219261
232 Ga0207641_10000041 3300026088 Bacteria 191595
233 Ga0207641_10000294 3300026088 Bacteria 62469
234 Ga0207641_10002183 3300026088 Bacteria 18414
235 Ga0207641_10002659 3300026088 Bacteria 16331
236 Ga0207676_10000034 3300026095 Bacteria 206058
237 Ga0207676_10000039 3300026095 Bacteria 171142
238 Ga0207676_10012298 3300026095 Bacteria 6128
239 Ga0207676_10025214 3300026095 Bacteria 4411
240 Ga0207676_10136367 3300026095 Bacteria 2094
241 Ga0207674_10013710 3300026116 Bacteria 8975
242 Ga0207674_10023778 3300026116 Bacteria 6557
243 Ga0207674_10131693 3300026116 Bacteria 2463
244 Ga0207675_100000097 3300026118 Bacteria 69812
245 Ga0207675_100000341 3300026118 Bacteria 44495
246 Ga0207675_100000709 3300026118 Bacteria 33028
247 Ga0207675_100001462 3300026118 Bacteria 23681
248 Ga0207698_10002112 3300026142 Bacteria 11720
249 Ga0207698_10081574 3300026142 Bacteria 2611
250 Ga0209974_10000955 3300027876 Bacteria 10116
251 Ga0268266_10000028 3300028379 Bacteria 425294
252 Ga0268265_10000052 3300028380 Bacteria 174254
253 Ga0268265_10000061 3300028380 Bacteria 148625
254 Ga0268265_10000064 3300028380 Bacteria 144164
255 Ga0268265_10000143 3300028380 Bacteria 90469
256 Ga0268265_10000172 3300028380 Bacteria 77649
257 Ga0268265_10000655 3300028380 Bacteria 34369
258 Ga0268265_10084105 3300028380 Bacteria 2521
259 Ga0268264_10000006 3300028381 Bacteria 827324
260 Ga0268264_10000010 3300028381 Bacteria 596543
261 Ga0268264_10000070 3300028381 Bacteria 268524
262 Ga0268264_10000144 3300028381 Bacteria 168841
263 Ga0307513_10121805 3300031456 Bacteria 2573
264 Ga0307408_100099467 3300031548 Bacteria 2213
265 Ga0307408_100155526 3300031548 Bacteria 1810
266 Ga0307508_10002203 3300031616 Bacteria 20787
267 Ga0307405_10026457 3300031731 Bacteria 3346
268 Ga0307406_10027075 3300031901 Bacteria 3450
269 Ga0307412_10000557 3300031911 Bacteria 22165
270 Ga0307412_10013777 3300031911 Bacteria 4750
271 Ga0307412_10016260 3300031911 Bacteria 4429
272 Ga0307416_100046278 3300032002 Bacteria 3432
273 Ga0307414_10000220 3300032004 Bacteria 37614
274 Ga0307414_10000288 3300032004 Bacteria 29634
275 Ga0373927_0092567 3300035695 Bacteria 1964
276 Ga0439461_0000176 3300041410 Bacteria 8682
277 Ga0439465_0001141 3300041413 Bacteria 8511
278 Ga0439465_0011780 3300041413 Bacteria 2739
279 Ga0439431_0001374 3300041997 Bacteria 5364
280 Ga0439442_004904 3300042002 Bacteria 2665
281 Ga0439445_0000205 3300042004 Bacteria 10845
282 Ga0439432_002115 3300042006 Bacteria 7490
283 Ga0439462_0001969 3300042015 Bacteria 4696
284 Ga0439434_0000226 3300042435 Bacteria 15798
285 Ga0453684_0125475 3300044712 Bacteria 3091
286 Ga0495638_0012844 3300046460 Bacteria 5722
287 Ga0495607_0009182 3300046501 Bacteria 6720
288 Ga0495654_0009240 3300046530 Bacteria 5407
289 Ga0495597_0011681 3300046542 Bacteria 4253
290 Ga0495668_0003843 3300046616 Bacteria 10992
291 Ga0495625_0000287 3300046660 Bacteria 78023
292 Ga0495670_0000014 3300046691 Bacteria 138993
293 Ga0495686_0000544 3300047472 Bacteria 53939
294 Ga0496100_0063620 3300048903 Bacteria 2438
295 Ga0496101_0067735 3300048904 Bacteria 2607
296 Ga0496102_0000719 3300048905 Bacteria 32658
297 Ga0496102_0000756 3300048905 Bacteria 31601
298 Ga0496103_0000562 3300048906 Bacteria 29450
299 Ga0496103_0000648 3300048906 Bacteria 26322
300 Ga0496103_0023134 3300048906 Bacteria 3746
301 Ga0496104_0000882 3300048907 Bacteria 25819
302 Ga0496105_0000447 3300048908 Bacteria 27187
303 Ga0496107_0123201 3300048910 Bacteria 1910
304 Ga0496110_0102923 3300048913 Bacteria 2561
305 Ga0496112_0108468 3300048915 Bacteria 2746
306 Ga0496113_0000442 3300048916 Bacteria 20174
307 Ga0496115_0007330 3300048918 Bacteria 8113
308 Ga0496115_0088163 3300048918 Bacteria 2533
309 Ga0496116_0014229 3300048919 Bacteria 6366
310 Ga0496117_0000519 3300048920 Bacteria 63633
311 Ga0496117_0000566 3300048920 Bacteria 60778
312 Ga0496117_0040278 3300048920 Bacteria 3437
313 Ga0496117_0043409 3300048920 Bacteria 3269
314 Ga0496118_0000193 3300048921 Bacteria 107307
315 Ga0496118_0004294 3300048921 Bacteria 17043
316 Ga0496118_0018024 3300048921 Bacteria 6393
317 Ga0496119_0002088 3300048922 Bacteria 22564
318 Ga0496119_0006443 3300048922 Bacteria 10873
319 Ga0496120_0001454 3300048923 Bacteria 28335
320 Ga0496120_0065811 3300048923 Bacteria 2006
321 Ga0496121_0000017 3300048924 Bacteria 546415
322 Ga0496121_0014628 3300048924 Bacteria 8299
323 Ga0496121_0021753 3300048924 Bacteria 6266
324 Ga0496121_0045177 3300048924 Bacteria 3788
325 Ga0496122_0003064 3300048925 Bacteria 22543
326 Ga0496123_0002028 3300048926 Bacteria 26145
327 Ga0496123_0036597 3300048926 Bacteria 3478
328 Ga0496124_0000237 3300048927 Bacteria 107270
329 Ga0496124_0004045 3300048927 Bacteria 17403
330 Ga0496124_0006761 3300048927 Bacteria 12394
331 Ga0496124_0009452 3300048927 Bacteria 10042
332 Ga0496124_0011341 3300048927 Bacteria 8912
333 Ga0496125_0004613 3300048928 Bacteria 15747
334 Ga0496125_0034024 3300048928 Bacteria 4498
335 Ga0496125_0126980 3300048928 Bacteria 1805
336 Ga0496126_0000158 3300048929 Bacteria 156032
337 Ga0501034_0122793 3300049571 Bacteria 2583
338 Ga0501043_0132087 3300049579 Bacteria 1956
339 Ga0501047_0011036 3300049581 Bacteria 8548
340 Ga0501223_000358 3300049663 Bacteria 11197
341 Ga0501224_000057 3300049664 Bacteria 13512
342 Ga0501233_000055 3300049668 Bacteria 15138
343 Ga0501249_000833 3300049679 Bacteria 6820
344 Ga0501225_0000228 3300049705 Bacteria 17699
345 Ga0501280_003165 3300049776 Bacteria 2570
346 Ga0501226_000144 3300049853 Bacteria 13558
347 Ga0500643_000078 3300053087 Bacteria 104681
348 Ga0500643_000638 3300053087 Bacteria 23610
349 Ga0500643_001409 3300053087 Bacteria 13889
350 Ga0500643_003756 3300053087 Bacteria 7130
351 Ga0500651_0016712 3300053093 Bacteria 4515
352 Ga0500566_0041800 3300053094 Bacteria 2647
353 Ga0500592_004833 3300053116 Bacteria 2141
354 Ga0500595_003371 3300053119 Bacteria 7485
355 Ga0500655_000566 3300053133 Bacteria 7421
356 Ga0500658_0012742 3300053134 Bacteria 3104
357 Ga0500658_0044970 3300053134 Bacteria 1783
358 Ga0500568_0009253 3300053139 Bacteria 4696
359 Ga0500568_0009602 3300053139 Bacteria 4584
360 Ga0500590_000764 3300053148 Bacteria 11853
361 Ga0500627_0000116 3300053158 Bacteria 25428
362 Ga0500627_0021432 3300053158 Bacteria 2607

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031616 Ga0307508_10002203 Ga0307508_100022036 422
2 3300049776 Ga0501280_003165 Ga0501280_003165_246_1649 423
3 3300002076 JGI24749J21850_1000241 JGI24749J21850_10002415 425
4 3300002459 JGI24751J29686_10000672 JGI24751J29686_100006726 425
5 3300005331 Ga0070670_100000047 Ga0070670_10000004792 425
6 3300005347 Ga0070668_100046696 Ga0070668_1000466962 425
7 3300005353 Ga0070669_100000072 Ga0070669_10000007263 425
8 3300005367 Ga0070667_100013668 Ga0070667_1000136683 425
9 3300005617 Ga0068859_100095750 Ga0068859_1000957502 425
10 3300005618 Ga0068864_100000051 Ga0068864_10000005192 425
11 3300005719 Ga0068861_100001849 Ga0068861_1000018491 425
12 3300005844 Ga0068862_100000036 Ga0068862_100000036133 425
13 3300006931 Ga0097620_100095750 Ga0097620_1000957502 425
14 3300009177 Ga0105248_10000662 Ga0105248_1000066232 425
15 3300014326 Ga0157380_10000276 Ga0157380_1000027622 425
16 3300025923 Ga0207681_10000061 Ga0207681_1000006132 425
17 3300025925 Ga0207650_10000038 Ga0207650_100000385 425
18 3300025941 Ga0207711_10000254 Ga0207711_1000025437 425
19 3300025986 Ga0207658_10011258 Ga0207658_100112583 425
20 3300026095 Ga0207676_10000034 Ga0207676_10000034178 425
21 3300026118 Ga0207675_100001462 Ga0207675_10000146217 425
22 3300028380 Ga0268265_10000052 Ga0268265_10000052126 425
23 3300048905 Ga0496102_0000719 Ga0496102_0000719_5006_6340 430
24 3300048906 Ga0496103_0000562 Ga0496103_0000562_1701_3035 430
25 3300048919 Ga0496116_0014229 Ga0496116_0014229_414_1748 430
26 3300048920 Ga0496117_0000519 Ga0496117_0000519_4972_6306 430
27 3300048921 Ga0496118_0000193 Ga0496118_0000193_4928_6262 430
28 3300048922 Ga0496119_0006443 Ga0496119_0006443_853_2187 430
29 3300048923 Ga0496120_0065811 Ga0496120_0065811_304_1638 430
30 3300048927 Ga0496124_0000237 Ga0496124_0000237_101046_102380 430
31 3300005347 Ga0070668_100059804 Ga0070668_1000598042 431
32 3300025972 Ga0207668_10006305 Ga0207668_100063058 431
33 3300046660 Ga0495625_0000287 Ga0495625_0000287_15608_16915 432
34 3300049571 Ga0501034_0122793 Ga0501034_0122793_260_1603 434
35 3300049663 Ga0501223_000358 Ga0501223_000358_7885_9228 434
36 3300049664 Ga0501224_000057 Ga0501224_000057_2526_3869 434
37 3300049668 Ga0501233_000055 Ga0501233_000055_12352_13695 434
38 3300049705 Ga0501225_0000228 Ga0501225_0000228_2709_4052 434
39 3300049853 Ga0501226_000144 Ga0501226_000144_2572_3915 434
40 3300002774 JGI25150J39212_1000020 JGI25150J39212_100002037 435
41 3300003215 JGI25153J46596_10000017 JGI25153J46596_10000017179 435
42 3300003781 Ga0055536_1010572 Ga0055536_10105722 435
43 3300003792 Ga0055540_1003050 Ga0055540_10030502 435
44 3300025245 Ga0207425_1000022 Ga0207425_1000022227 435
45 3300025258 Ga0209129_1001976 Ga0209129_10019769 435
46 3300025292 Ga0209676_1013117 Ga0209676_10131172 435
47 3300025294 Ga0209025_1000318 Ga0209025_100031834 435
48 3300025297 Ga0209758_1000004 Ga0209758_1000004854 435
49 3300025298 Ga0209050_1000001 Ga0209050_10000012862 435
50 3300025303 Ga0209051_1000246 Ga0209051_100024662 435
51 3300025304 Ga0209257_1000765 Ga0209257_100076520 435
52 3300025304 Ga0209257_1001273 Ga0209257_100127313 435
53 3300005617 Ga0068859_100053403 Ga0068859_1000534034 439
54 3300006931 Ga0097620_100053404 Ga0097620_1000534044 439
55 3300001989 JGI24739J22299_10005024 JGI24739J22299_100050243 440
56 3300001990 JGI24737J22298_10009464 JGI24737J22298_100094642 440
57 3300005548 Ga0070665_100000025 Ga0070665_10000002568 440
58 3300005577 Ga0068857_100161036 Ga0068857_1001610362 440
59 3300005578 Ga0068854_100057020 Ga0068854_1000570202 440
60 3300005618 Ga0068864_100004444 Ga0068864_1000044443 440
61 3300005719 Ga0068861_100012322 Ga0068861_1000123223 440
62 3300005841 Ga0068863_100000270 Ga0068863_10000027046 440
63 3300005841 Ga0068863_100005033 Ga0068863_1000050337 440
64 3300005842 Ga0068858_100001967 Ga0068858_10000196712 440
65 3300005843 Ga0068860_100000001 Ga0068860_100000001653 440
66 3300005843 Ga0068860_100000181 Ga0068860_1000001815 440
67 3300005844 Ga0068862_100000048 Ga0068862_10000004895 440
68 3300005937 Ga0081455_10005153 Ga0081455_100051538 440
69 3300017792 Ga0163161_10000509 Ga0163161_100005097 440
70 3300025223 Ga0207672_1000730 Ga0207672_10007303 440
71 3300025903 Ga0207680_10000004 Ga0207680_10000004217 440
72 3300025923 Ga0207681_10000038 Ga0207681_10000038112 440
73 3300025924 Ga0207694_10140733 Ga0207694_101407332 440
74 3300025933 Ga0207706_10042214 Ga0207706_100422142 440
75 3300025961 Ga0207712_10000001 Ga0207712_1000000191 440
76 3300025986 Ga0207658_10000109 Ga0207658_1000010959 440
77 3300025986 Ga0207658_10001350 Ga0207658_100013506 440
78 3300026035 Ga0207703_10001087 Ga0207703_100010877 440
79 3300026067 Ga0207678_10062804 Ga0207678_100628041 440
80 3300026088 Ga0207641_10000033 Ga0207641_1000003321 440
81 3300026088 Ga0207641_10002659 Ga0207641_1000265911 440
82 3300026095 Ga0207676_10025214 Ga0207676_100252142 440
83 3300026116 Ga0207674_10023778 Ga0207674_100237784 440
84 3300026118 Ga0207675_100000709 Ga0207675_10000070921 440
85 3300027876 Ga0209974_10000955 Ga0209974_100009555 440
86 3300028379 Ga0268266_10000028 Ga0268266_10000028315 440
87 3300028380 Ga0268265_10000172 Ga0268265_1000017214 440
88 3300028381 Ga0268264_10000006 Ga0268264_10000006217 440
89 3300028381 Ga0268264_10000144 Ga0268264_1000014469 440
90 3300031548 Ga0307408_100099467 Ga0307408_1000994672 440
91 3300031731 Ga0307405_10026457 Ga0307405_100264571 440
92 3300053087 Ga0500643_000078 Ga0500643_000078_1009_2343 440
93 3300001976 JGI24752J21851_1000755 JGI24752J21851_10007553 441
94 3300005295 Ga0065707_10093195 Ga0065707_100931952 441
95 3300005331 Ga0070670_100000030 Ga0070670_10000003093 441
96 3300005367 Ga0070667_100000161 Ga0070667_10000016165 441
97 3300009011 Ga0105251_10002360 Ga0105251_1000236010 441
98 3300009101 Ga0105247_10010085 Ga0105247_100100852 441
99 3300009177 Ga0105248_10000045 Ga0105248_1000004590 441
100 3300014968 Ga0157379_10055748 Ga0157379_100557483 441
101 3300048920 Ga0496117_0043409 Ga0496117_0043409_1182_2522 441
102 3300048921 Ga0496118_0018024 Ga0496118_0018024_703_2043 441
103 3300005577 Ga0068857_100156590 Ga0068857_1001565902 442
104 3300025981 Ga0207640_10000606 Ga0207640_1000060616 442
105 3300031911 Ga0307412_10000557 Ga0307412_1000055722 442
106 3300032004 Ga0307414_10000288 Ga0307414_1000028812 442
107 3300002074 JGI24748J21848_1000581 JGI24748J21848_10005812 444
108 3300005347 Ga0070668_100003628 Ga0070668_1000036285 444
109 3300005353 Ga0070669_100000039 Ga0070669_10000003998 444
110 3300005367 Ga0070667_100001386 Ga0070667_10000138612 444
111 3300005548 Ga0070665_100001278 Ga0070665_10000127819 444
112 3300009177 Ga0105248_10167222 Ga0105248_101672222 444
113 3300025711 Ga0207696_1001478 Ga0207696_10014786 444
114 3300025735 Ga0207713_1001756 Ga0207713_10017566 444
115 3300025923 Ga0207681_10000144 Ga0207681_1000014439 444
116 3300025931 Ga0207644_10012870 Ga0207644_100128704 444
117 3300025941 Ga0207711_10012391 Ga0207711_100123914 444
118 3300025941 Ga0207711_10126241 Ga0207711_101262412 444
119 3300025986 Ga0207658_10000216 Ga0207658_100002165 444
120 3300028380 Ga0268265_10084105 Ga0268265_100841053 444
121 3300041410 Ga0439461_0000176 Ga0439461_0000176_673_2079 444
122 3300041413 Ga0439465_0001141 Ga0439465_0001141_1241_2647 444
123 3300041997 Ga0439431_0001374 Ga0439431_0001374_1427_2833 444
124 3300042002 Ga0439442_004904 Ga0439442_004904_1204_2610 444
125 3300042004 Ga0439445_0000205 Ga0439445_0000205_985_2391 444
126 3300042006 Ga0439432_002115 Ga0439432_002115_2223_3629 444
127 3300042015 Ga0439462_0001969 Ga0439462_0001969_1457_2863 444
128 3300042435 Ga0439434_0000226 Ga0439434_0000226_5963_7369 444
129 3300048904 Ga0496101_0067735 Ga0496101_0067735_1252_2586 444
130 3300003214 JGI25165J46597_1000104 JGI25165J46597_1000104124 445
131 3300025261 Ga0209233_1000164 Ga0209233_100016420 445
132 3300005616 Ga0068852_100261397 Ga0068852_1002613971 446
133 3300025981 Ga0207640_10037682 Ga0207640_100376822 446
134 3300026142 Ga0207698_10081574 Ga0207698_100815742 446
135 3300053119 Ga0500595_003371 Ga0500595_003371_4950_6305 447
136 3300003322 rootL2_10266176 rootL2_102661762 448
137 3300053116 Ga0500592_004833 Ga0500592_004833_490_1902 448
138 3300053158 Ga0500627_0000116 Ga0500627_0000116_613_2025 448
139 3300053158 Ga0500627_0021432 Ga0500627_0021432_277_1689 448
140 3300013306 Ga0163162_10060544 Ga0163162_100605442 449
141 3300053087 Ga0500643_001409 Ga0500643_001409_786_2204 449
142 3300009553 Ga0105249_10000055 Ga0105249_1000005582 454
143 3300046460 Ga0495638_0012844 Ga0495638_0012844_3756_5144 454
144 3300046501 Ga0495607_0009182 Ga0495607_0009182_1333_2712 454
145 iso_pu_bacteria 2885429604 2885431979 454
146 3300048924 Ga0496121_0021753 Ga0496121_0021753_1981_3378 456
147 3300005335 Ga0070666_10000068 Ga0070666_1000006848 457
148 3300005353 Ga0070669_100000018 Ga0070669_10000001865 457
149 3300005355 Ga0070671_100000011 Ga0070671_100000011131 457
150 3300005539 Ga0068853_100121776 Ga0068853_1001217762 457
151 3300005617 Ga0068859_100005635 Ga0068859_1000056355 457
152 3300005618 Ga0068864_100001740 Ga0068864_10000174018 457
153 3300005842 Ga0068858_100000174 Ga0068858_10000017439 457
154 3300005844 Ga0068862_100000543 Ga0068862_10000054338 457
155 3300006931 Ga0097620_100005636 Ga0097620_1000056365 457
156 3300009098 Ga0105245_10001185 Ga0105245_1000118521 457
157 3300009101 Ga0105247_10011827 Ga0105247_100118272 457
158 3300009177 Ga0105248_10124255 Ga0105248_101242552 457
159 3300009551 Ga0105238_10025192 Ga0105238_100251926 457
160 3300009553 Ga0105249_10003294 Ga0105249_100032943 457
161 3300013306 Ga0163162_10017347 Ga0163162_100173472 457
162 3300017792 Ga0163161_10082662 Ga0163161_100826622 457
163 3300025315 Ga0207697_10000184 Ga0207697_100001846 457
164 3300025900 Ga0207710_10009607 Ga0207710_100096072 457
165 3300025903 Ga0207680_10009699 Ga0207680_100096993 457
166 3300025923 Ga0207681_10000008 Ga0207681_10000008292 457
167 3300025924 Ga0207694_10013633 Ga0207694_100136336 457
168 3300025931 Ga0207644_10000006 Ga0207644_10000006282 457
169 3300025941 Ga0207711_10003533 Ga0207711_1000353311 457
170 3300025960 Ga0207651_10125519 Ga0207651_101255192 457
171 3300025961 Ga0207712_10004749 Ga0207712_100047495 457
172 3300025972 Ga0207668_10002503 Ga0207668_100025037 457
173 3300026035 Ga0207703_10000142 Ga0207703_1000014254 457
174 3300026035 Ga0207703_10038649 Ga0207703_100386492 457
175 3300026041 Ga0207639_10078564 Ga0207639_100785642 457
176 3300026095 Ga0207676_10012298 Ga0207676_100122981 457
177 3300026118 Ga0207675_100000341 Ga0207675_10000034140 457
178 3300028380 Ga0268265_10000064 Ga0268265_10000064126 457
179 3300028381 Ga0268264_10000010 Ga0268264_1000001076 457
180 3300048928 Ga0496125_0034024 Ga0496125_0034024_1266_2684 457
181 iso_pu_bacteria 2946787523 2946790011 457
182 iso_pu_bacteria 2599185354 2600202976 458
183 iso_pu_bacteria 2751185897 2753767340 458
184 3300003771 Ga0055526_1000046 Ga0055526_100004618 460
185 3300003791 Ga0055530_10015163 Ga0055530_100151632 460
186 3300025263 Ga0209565_1000903 Ga0209565_100090311 460
187 3300025273 Ga0209673_1033738 Ga0209673_10337381 460
188 3300025295 Ga0209564_1000277 Ga0209564_100027789 460
189 3300048918 Ga0496115_0007330 Ga0496115_0007330_2612_4012 460
190 3300048924 Ga0496121_0000017 Ga0496121_0000017_47923_49311 460
191 3300053087 Ga0500643_003756 Ga0500643_003756_1746_3152 460
192 3300031901 Ga0307406_10027075 Ga0307406_100270751 461
193 3300032002 Ga0307416_100046278 Ga0307416_1000462783 461
194 3300047472 Ga0495686_0000544 Ga0495686_0000544_3465_4868 461
195 3300053087 Ga0500643_000638 Ga0500643_000638_21693_23105 461
196 iso_pu_bacteria 2643221622 2644126820 461
197 3300053134 Ga0500658_0044970 Ga0500658_0044970_276_1679 462
198 3300053139 Ga0500568_0009602 Ga0500568_0009602_2446_3849 462
199 iso_pu_bacteria 2919138771 2919139010 462
200 3300003215 JGI25153J46596_10010560 JGI25153J46596_100105602 463
201 3300003775 Ga0055524_1000169 Ga0055524_100016967 463
202 3300003791 Ga0055530_10000359 Ga0055530_1000035953 463
203 3300003791 Ga0055530_10014495 Ga0055530_100144952 463
204 3300003794 Ga0055531_10000601 Ga0055531_100006012 463
205 3300003794 Ga0055531_10006441 Ga0055531_100064416 463
206 3300005262 Ga0065165_1002077 Ga0065165_100207714 463
207 3300005262 Ga0065165_1006291 Ga0065165_10062914 463
208 3300005262 Ga0065165_1017430 Ga0065165_10174302 463
209 3300025263 Ga0209565_1000012 Ga0209565_100001243 463
210 3300025273 Ga0209673_1004325 Ga0209673_10043257 463
211 3300025291 Ga0209675_1006619 Ga0209675_10066192 463
212 3300025297 Ga0209758_1022745 Ga0209758_10227453 463
213 3300025298 Ga0209050_1000010 Ga0209050_1000010395 463
214 3300025298 Ga0209050_1007642 Ga0209050_10076424 463
215 3300025299 Ga0209256_1000012 Ga0209256_1000012234 463
216 3300025304 Ga0209257_1000009 Ga0209257_1000009720 463
217 3300025304 Ga0209257_1000934 Ga0209257_100093440 463
218 3300041413 Ga0439465_0011780 Ga0439465_0011780_1251_2657 463
219 3300044712 Ga0453684_0125475 Ga0453684_0125475_179_1648 463
220 3300046691 Ga0495670_0000014 Ga0495670_0000014_4433_5839 463
221 3300053094 Ga0500566_0041800 Ga0500566_0041800_978_2384 463
222 3300053134 Ga0500658_0012742 Ga0500658_0012742_550_1956 463
223 3300002459 JGI24751J29686_10001134 JGI24751J29686_100011346 464
224 3300005331 Ga0070670_100000570 Ga0070670_10000057031 464
225 3300005347 Ga0070668_100000001 Ga0070668_100000001138 464
226 3300005355 Ga0070671_100000106 Ga0070671_10000010646 464
227 3300005367 Ga0070667_100000006 Ga0070667_100000006155 464
228 3300005367 Ga0070667_100000205 Ga0070667_10000020558 464
229 3300005719 Ga0068861_100000143 Ga0068861_10000014335 464
230 3300005841 Ga0068863_100055519 Ga0068863_1000555194 464
231 3300005842 Ga0068858_100003131 Ga0068858_10000313116 464
232 3300005843 Ga0068860_100000120 Ga0068860_100000120125 464
233 3300005844 Ga0068862_100001801 Ga0068862_10000180115 464
234 3300005844 Ga0068862_100092960 Ga0068862_1000929602 464
235 3300009177 Ga0105248_10121858 Ga0105248_101218583 464
236 3300009553 Ga0105249_10107496 Ga0105249_101074962 464
237 3300012513 Ga0157326_1000464 Ga0157326_10004643 464
238 3300025925 Ga0207650_10001822 Ga0207650_1000182216 464
239 3300025931 Ga0207644_10000047 Ga0207644_1000004761 464
240 3300025941 Ga0207711_10000990 Ga0207711_100009905 464
241 3300025941 Ga0207711_10180788 Ga0207711_101807881 464
242 3300025972 Ga0207668_10000009 Ga0207668_1000000919 464
243 3300025986 Ga0207658_10000010 Ga0207658_10000010152 464
244 3300026035 Ga0207703_10002458 Ga0207703_1000245815 464
245 3300026088 Ga0207641_10000294 Ga0207641_100002946 464
246 3300026088 Ga0207641_10002183 Ga0207641_1000218316 464
247 3300026095 Ga0207676_10136367 Ga0207676_101363671 464
248 3300026118 Ga0207675_100000097 Ga0207675_1000000972 464
249 3300028380 Ga0268265_10000143 Ga0268265_1000014366 464
250 3300028381 Ga0268264_10000070 Ga0268264_1000007092 464
251 3300031911 Ga0307412_10013777 Ga0307412_100137772 464
252 3300035695 Ga0373927_0092567 Ga0373927_0092567_22_1440 464
253 3300046542 Ga0495597_0011681 Ga0495597_0011681_2181_3599 464
254 3300049579 Ga0501043_0132087 Ga0501043_0132087_179_1600 464
255 3300049581 Ga0501047_0011036 Ga0501047_0011036_6630_8051 464
256 3300053093 Ga0500651_0016712 Ga0500651_0016712_425_1843 464
257 3300053133 Ga0500655_000566 Ga0500655_000566_765_2183 464
258 3300053148 Ga0500590_000764 Ga0500590_000764_2930_4348 464
259 iso_pu_bacteria 2643221541 2643730773 464
260 iso_pu_bacteria 2643221605 2644040822 464
261 iso_pu_bacteria 2643221606 2644044574 464
262 iso_pu_bacteria 2643221671 2644391501 464
263 3300001904 JGI24736J21556_1000046 JGI24736J21556_100004616 465
264 3300001976 JGI24752J21851_1000149 JGI24752J21851_10001494 465
265 3300001979 JGI24740J21852_10008445 JGI24740J21852_100084452 465
266 3300001989 JGI24739J22299_10005431 JGI24739J22299_100054313 465
267 3300001990 JGI24737J22298_10004028 JGI24737J22298_100040284 465
268 3300002067 JGI24735J21928_10012279 JGI24735J21928_100122792 465
269 3300002070 JGI24750J21931_1000329 JGI24750J21931_10003292 465
270 3300002074 JGI24748J21848_1000015 JGI24748J21848_100001568 465
271 3300002075 JGI24738J21930_10001038 JGI24738J21930_100010382 465
272 3300002076 JGI24749J21850_1001008 JGI24749J21850_10010082 465
273 3300002239 JGI24034J26672_10000006 JGI24034J26672_1000000668 465
274 3300005295 Ga0065707_10082429 Ga0065707_100824295 465
275 3300005329 Ga0070683_100096273 Ga0070683_1000962733 465
276 3300005330 Ga0070690_100000012 Ga0070690_10000001255 465
277 3300005331 Ga0070670_100038475 Ga0070670_1000384751 465
278 3300005335 Ga0070666_10000014 Ga0070666_10000014144 465
279 3300005353 Ga0070669_100000351 Ga0070669_10000035123 465
280 3300005355 Ga0070671_100007724 Ga0070671_1000077249 465
281 3300005365 Ga0070688_100010250 Ga0070688_1000102503 465
282 3300005367 Ga0070667_100031850 Ga0070667_1000318502 465
283 3300005466 Ga0070685_10000307 Ga0070685_1000030713 465
284 3300005544 Ga0070686_100000002 Ga0070686_100000002263 465
285 3300005577 Ga0068857_100006205 Ga0068857_1000062054 465
286 3300005578 Ga0068854_100019832 Ga0068854_1000198323 465
287 3300005618 Ga0068864_100000041 Ga0068864_10000004192 465
288 3300005841 Ga0068863_100000035 Ga0068863_10000003592 465
289 3300005842 Ga0068858_100146310 Ga0068858_1001463102 465
290 3300005844 Ga0068862_100000042 Ga0068862_10000004283 465
291 3300009092 Ga0105250_10024859 Ga0105250_100248592 465
292 3300009177 Ga0105248_10014015 Ga0105248_100140156 465
293 3300009545 Ga0105237_10009149 Ga0105237_100091498 465
294 3300009553 Ga0105249_10000005 Ga0105249_1000000590 465
295 3300013104 Ga0157370_10017528 Ga0157370_100175282 465
296 3300013105 Ga0157369_10026523 Ga0157369_100265235 465
297 3300013306 Ga0163162_10044927 Ga0163162_100449273 465
298 3300014325 Ga0163163_10163614 Ga0163163_101636142 465
299 3300014326 Ga0157380_10000446 Ga0157380_1000044616 465
300 3300014326 Ga0157380_10002141 Ga0157380_100021419 465
301 3300025321 Ga0207656_10004662 Ga0207656_100046621 465
302 3300025911 Ga0207654_10005166 Ga0207654_100051662 465
303 3300025913 Ga0207695_10015394 Ga0207695_100153943 465
304 3300025914 Ga0207671_10001406 Ga0207671_100014069 465
305 3300025924 Ga0207694_10005859 Ga0207694_100058597 465
306 3300025925 Ga0207650_10000111 Ga0207650_1000011132 465
307 3300025941 Ga0207711_10000027 Ga0207711_10000027147 465
308 3300025949 Ga0207667_10048558 Ga0207667_100485583 465
309 3300025961 Ga0207712_10000131 Ga0207712_1000013182 465
310 3300025981 Ga0207640_10048023 Ga0207640_100480233 465
311 3300025986 Ga0207658_10000839 Ga0207658_1000083929 465
312 3300026078 Ga0207702_10008772 Ga0207702_100087723 465
313 3300026088 Ga0207641_10000041 Ga0207641_1000004191 465
314 3300026095 Ga0207676_10000039 Ga0207676_1000003986 465
315 3300026116 Ga0207674_10013710 Ga0207674_100137106 465
316 3300026116 Ga0207674_10131693 Ga0207674_101316932 465
317 3300026142 Ga0207698_10002112 Ga0207698_100021123 465
318 3300028380 Ga0268265_10000061 Ga0268265_1000006161 465
319 3300031548 Ga0307408_100155526 Ga0307408_1001555261 465
320 3300031911 Ga0307412_10016260 Ga0307412_100162604 465
321 3300046530 Ga0495654_0009240 Ga0495654_0009240_970_2391 465
322 3300046616 Ga0495668_0003843 Ga0495668_0003843_355_1776 465
323 3300048905 Ga0496102_0000756 Ga0496102_0000756_20951_22372 465
324 3300048906 Ga0496103_0023134 Ga0496103_0023134_2298_3719 465
325 3300048910 Ga0496107_0123201 Ga0496107_0123201_184_1605 465
326 3300048920 Ga0496117_0040278 Ga0496117_0040278_1128_2549 465
327 3300048924 Ga0496121_0045177 Ga0496121_0045177_1241_2662 465
328 3300048926 Ga0496123_0036597 Ga0496123_0036597_348_1775 465
329 3300048927 Ga0496124_0004045 Ga0496124_0004045_13080_14507 465
330 3300048927 Ga0496124_0006761 Ga0496124_0006761_2845_4272 465
331 3300048927 Ga0496124_0009452 Ga0496124_0009452_8116_9543 465
332 3300048928 Ga0496125_0126980 Ga0496125_0126980_42_1469 465
333 3300049679 Ga0501249_000833 Ga0501249_000833_4135_5565 465
334 3300053139 Ga0500568_0009253 Ga0500568_0009253_357_1778 465
335 iso_pu_bacteria 2599185359 2600226121 465
336 iso_pu_bacteria 2738541275 2738712791 465
337 iso_pu_bacteria 2738541301 2738851215 465
338 iso_pu_bacteria 2738541304 2738866945 465
339 iso_pu_bacteria 2738543022 2739299462 465
340 iso_pu_bacteria 2738543033 2739361141 465
341 iso_pu_bacteria 2818991466 2819712831 465
342 iso_pu_bacteria 2879163058 2879164607 465
343 iso_pu_bacteria 2928100450 2928104526 465
344 iso_pu_bacteria 2928526807 2928527425 465
345 iso_pu_bacteria 2928959182 2928963177 465
346 iso_pu_bacteria 2928968154 2928969090 465
347 3300005347 Ga0070668_100021018 Ga0070668_1000210182 466
348 3300005844 Ga0068862_100088421 Ga0068862_1000884213 466
349 3300009177 Ga0105248_10026598 Ga0105248_100265988 466
350 3300025972 Ga0207668_10000806 Ga0207668_1000080614 466
351 iso_pu_bacteria 2896253425 2896256522 466
352 3300005617 Ga0068859_100118690 Ga0068859_1001186902 467
353 3300005843 Ga0068860_100016052 Ga0068860_1000160529 467
354 3300005844 Ga0068862_100000702 Ga0068862_1000007029 467
355 3300006931 Ga0097620_100118684 Ga0097620_1001186842 467
356 3300009101 Ga0105247_10027188 Ga0105247_100271882 467
357 3300009553 Ga0105249_10000097 Ga0105249_1000009776 467
358 3300025961 Ga0207712_10000074 Ga0207712_1000007433 467
359 3300028380 Ga0268265_10000655 Ga0268265_1000065526 467
360 3300031456 Ga0307513_10121805 Ga0307513_101218052 467
361 3300032004 Ga0307414_10000220 Ga0307414_1000022018 467
362 2162886007 SwRhRL2b_contig_1463083 SwRhRL2b_0230.00007250 469
363 3300005289 Ga0065704_10000711 Ga0065704_1000071110 469
364 3300005355 Ga0070671_100003716 Ga0070671_1000037164 469
365 3300006177 Ga0075362_10006133 Ga0075362_100061334 469
366 3300009177 Ga0105248_10053690 Ga0105248_100536904 469
367 3300013306 Ga0163162_10003309 Ga0163162_100033099 469
368 3300048903 Ga0496100_0063620 Ga0496100_0063620_92_1501 469
369 3300048906 Ga0496103_0000648 Ga0496103_0000648_22384_23793 469
370 3300048907 Ga0496104_0000882 Ga0496104_0000882_17915_19324 469
371 3300048908 Ga0496105_0000447 Ga0496105_0000447_2749_4158 469
372 3300048913 Ga0496110_0102923 Ga0496110_0102923_468_1877 469
373 3300048915 Ga0496112_0108468 Ga0496112_0108468_523_1932 469
374 3300048916 Ga0496113_0000442 Ga0496113_0000442_1319_2728 469
375 3300048918 Ga0496115_0088163 Ga0496115_0088163_580_1989 469
376 3300048920 Ga0496117_0000566 Ga0496117_0000566_19347_20756 469
377 3300048921 Ga0496118_0004294 Ga0496118_0004294_2869_4278 469
378 3300048922 Ga0496119_0002088 Ga0496119_0002088_2657_4066 469
379 3300048923 Ga0496120_0001454 Ga0496120_0001454_24189_25598 469
380 3300048924 Ga0496121_0014628 Ga0496121_0014628_4019_5428 469
381 3300048925 Ga0496122_0003064 Ga0496122_0003064_2829_4238 469
382 3300048926 Ga0496123_0002028 Ga0496123_0002028_18241_19650 469
383 3300048927 Ga0496124_0011341 Ga0496124_0011341_4786_6195 469
384 3300048928 Ga0496125_0004613 Ga0496125_0004613_6496_7905 469
385 3300048929 Ga0496126_0000158 Ga0496126_0000158_2616_4025 469

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09856

ScfRs

Short-chain fatty acyl coenzyme A regulators

352

508

1

PF06114

Peptidase_M78

IrrE N-terminal-like domain

230

351

0.96

PF13560

HTH_31

Helix-turn-helix domain

15

69

0.95

PF12844

HTH_19

Helix-turn-helix domain

16

69

0.93

PF01381

HTH_3

Helix-turn-helix

19

73

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2icp-assembly1.cif.gz_A crystal structure of the bacterial antitoxin higa from escherichia coli at ph 4.0. northeast structural genomics consortium target er390. 0.956 9 58
3fym-assembly1.cif.gz_A the 1a structure of ymfm, a putative dna-binding membrane protein from staphylococcus aureus 0.9429 9 44
2xcj-assembly1.cif.gz_B crystal structure of p2 c, the immunity repressor of temperate e. coli phage p2 0.924 9 59
4yba-assembly1.cif.gz_A the structure of the c.kpn2i controller protein 0.8764 5 60
3jxc-assembly1.cif.gz_L crystal structure of the p22 c2 repressor protein in complex with synthetic operator 9t in the presence of tl+ 0.8696 9 67
ID Description Score Start End Superfamily
3fymA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9429 9 44 1.10.260.40
2xcjB00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.924 9 59 1.10.260.40
4ybaA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8764 5 60 1.10.260.40
3jxbD00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8701 9 67 1.10.260.40
2r1jL00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8691 9 67 1.10.260.40
ID Description Score Start End GO Terms
AF-A0A520JJZ9-F1-model_v4 XRE family transcriptional regulator 0.9616 1 60 GO:0003677
GO:0003700
GO:0005829
AF-A0A530M3P1-F1-model_v4 deleted 0.9473 186 306
AF-A0A2E1YVI4-F1-model_v4 deleted 0.9458 1 59
AF-A0A3B9UM76-F1-model_v4 deleted 0.9407 1 66
AF-A0A259BPN6-F1-model_v4 HTH cro/C1-type domain-containing protein 0.9364 3 66 GO:0003677
GO:0003700
GO:0005829

Feature Viewer

pLDDT pTM Quality
82.35 0.67 Medium
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Predicted Structure (AlphaFold2)

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