F417149

General Info

Members Datasets Scaffolds Average Seq Length
347 210 694 155

Family's Representative Sequence

Representative Sequence 3300013306|Ga0163162_11153764|Ga0163162_111537641
Length 171
Sequence MEQEGNMSEMKPRFDYSEAAPGVTAAMYAVERYVRKSGLEPAMLELVKLRASQINGCAYCVDMHTKDARAHGETEQRLYATAVWREAPFFTDRERAALAWTEAVTLVSQGQVPDSVYEIARKEFNEKELVDLTMAVIAINGWNRLAISFRAQAGTYEPAPPQAQAAQHENA

Samples

Sample ID Description Type Environment
1 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
27 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
28 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
29 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
54 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
55 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
58 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
59 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
60 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
69 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
70 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
73 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
74 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
75 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
76 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
77 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
78 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
79 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300013875 Rhizosphere microbial communities from switchgrass unharvested rhizosphere in Austin, TX, USA - RS_233 Metagenome Rhizosphere
82 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
83 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
84 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
85 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
86 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
87 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
88 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
89 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
90 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
91 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
92 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
93 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
133 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
134 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
135 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
138 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
139 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
140 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
141 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
142 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
143 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
144 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
145 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
146 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
147 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
148 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
149 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
150 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
151 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
152 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
153 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
154 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
155 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
156 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
157 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
158 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
159 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
160 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
161 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
162 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
163 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
166 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
167 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
168 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
169 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
170 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
171 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
172 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
173 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
185 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
186 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
187 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
188 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
189 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
190 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
191 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
192 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
193 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
194 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
197 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
198 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
199 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
200 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
201 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
202 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
203 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
204 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
205 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
206 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
207 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
208 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
209 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
210 2643221716 Flavobacterium sp. Root901 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.69
Metatranscriptomes 2.02
Isolates 0.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.75
Nodule 0
Rhizoplane 4.61
Rhizosphere 90.2
Stem 0
Stem Tuber 0
Unclassified 3.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163162_11153764 3300013306 Bacteria 879
2 JGI25406J46586_10000372 3300003203 Bacteria 20484
3 Ga0055531_10010433 3300003794 Bacteria 4616
4 Ga0065707_10638095 3300005295 Bacteria 670
5 Ga0070658_10062119 3300005327 Bacteria 3044
6 Ga0070658_11024857 3300005327 Bacteria 718
7 Ga0070676_10028188 3300005328 Bacteria 3189
8 Ga0070683_100013656 3300005329 Bacteria 7090
9 Ga0070683_100135397 3300005329 Bacteria 2332
10 Ga0070670_100279620 3300005331 Bacteria 1457
11 Ga0070670_101334815 3300005331 Bacteria 657
12 Ga0068869_100091678 3300005334 Bacteria 2286
13 Ga0068869_100627503 3300005334 Unclassified 910
14 Ga0070666_10078067 3300005335 Bacteria 2260
15 Ga0070666_10282380 3300005335 Bacteria 1180
16 Ga0070680_100091845 3300005336 Bacteria 2513
17 Ga0070680_100170925 3300005336 Bacteria 1829
18 Ga0070680_100331777 3300005336 Bacteria 1292
19 Ga0070682_101026400 3300005337 Bacteria 686
20 Ga0068868_100261261 3300005338 Unclassified 1460
21 Ga0070660_100002911 3300005339 Bacteria 11784
22 Ga0070660_100147652 3300005339 Bacteria 1889
23 Ga0070660_101125193 3300005339 Bacteria 665
24 Ga0070689_100381314 3300005340 Bacteria 1188
25 Ga0070691_10003458 3300005341 Bacteria 7102
26 Ga0070661_100008486 3300005344 Bacteria 7106
27 Ga0070661_101473574 3300005344 Bacteria 574
28 Ga0070692_10097645 3300005345 Bacteria 1606
29 Ga0070669_100145832 3300005353 Bacteria 1829
30 Ga0070669_100193023 3300005353 Bacteria 1598
31 Ga0070675_100151639 3300005354 Bacteria 1988
32 Ga0070671_100048617 3300005355 Bacteria 3528
33 Ga0070671_101275244 3300005355 Unclassified 648
34 Ga0070673_100057150 3300005364 Bacteria 3082
35 Ga0070688_100199197 3300005365 Bacteria 1400
36 Ga0070659_100006222 3300005366 Bacteria 8622
37 Ga0070659_100073398 3300005366 Bacteria 2723
38 Ga0070667_100099921 3300005367 Bacteria 2505
39 Ga0070667_100348586 3300005367 Bacteria 1340
40 Ga0070667_100710579 3300005367 Unclassified 930
41 Ga0070714_100001488 3300005435 Bacteria 17051
42 Ga0070714_100032007 3300005435 Bacteria 4391
43 Ga0070714_100085593 3300005435 Bacteria 2754
44 Ga0070714_100209374 3300005435 Bacteria 1787
45 Ga0070714_100251921 3300005435 Bacteria 1633
46 Ga0070713_100001348 3300005436 Bacteria 15703
47 Ga0070713_101388714 3300005436 Bacteria 681
48 Ga0070710_10226841 3300005437 Bacteria 1191
49 Ga0070711_100295624 3300005439 Bacteria 1286
50 Ga0070663_100002891 3300005455 Bacteria 9767
51 Ga0070663_100173778 3300005455 Bacteria 1667
52 Ga0070662_100001187 3300005457 Bacteria 15980
53 Ga0070681_10018309 3300005458 Bacteria 7001
54 Ga0070681_10098532 3300005458 Bacteria 2869
55 Ga0070681_10144670 3300005458 Bacteria 2307
56 Ga0070681_10648347 3300005458 Bacteria 971
57 Ga0068867_101018078 3300005459 Bacteria 752
58 Ga0070679_100009528 3300005530 Bacteria 9186
59 Ga0070679_100100932 3300005530 Bacteria 2872
60 Ga0070679_100365862 3300005530 Bacteria 1389
61 Ga0070684_100000551 3300005535 Bacteria 25740
62 Ga0070684_100008103 3300005535 Bacteria 8202
63 Ga0070684_100400555 3300005535 Bacteria 1265
64 Ga0068853_100045824 3300005539 Bacteria 3747
65 Ga0068853_100061149 3300005539 Bacteria 3257
66 Ga0068853_101184197 3300005539 Bacteria 738
67 Ga0070672_100720856 3300005543 Bacteria 874
68 Ga0070693_100366082 3300005547 Bacteria 990
69 Ga0070665_100155248 3300005548 Unclassified 2291
70 Ga0070665_100280526 3300005548 Unclassified 1668
71 Ga0070665_100688619 3300005548 Bacteria 1035
72 Ga0068855_100001032 3300005563 Bacteria 34674
73 Ga0068855_100077535 3300005563 Bacteria 3856
74 Ga0068855_100189630 3300005563 Bacteria 2320
75 Ga0068855_100285500 3300005563 Bacteria 1831
76 Ga0068855_100373345 3300005563 Bacteria 1567
77 Ga0070664_100030127 3300005564 Bacteria 4526
78 Ga0070664_100045706 3300005564 Bacteria 3698
79 Ga0070664_100099854 3300005564 Bacteria 2523
80 Ga0070664_100241402 3300005564 Bacteria 1622
81 Ga0068857_100003485 3300005577 Bacteria 13127
82 Ga0068857_100094444 3300005577 Bacteria 2678
83 Ga0068854_100009795 3300005578 Bacteria 6196
84 Ga0068854_100022606 3300005578 Bacteria 4288
85 Ga0068856_100003570 3300005614 Bacteria 15657
86 Ga0068856_100004391 3300005614 Bacteria 14053
87 Ga0068856_100042803 3300005614 Bacteria 4456
88 Ga0068856_100059243 3300005614 Bacteria 3782
89 Ga0068852_100055950 3300005616 Bacteria 3407
90 Ga0068852_100237150 3300005616 Bacteria 1741
91 Ga0068852_100367350 3300005616 Bacteria 1409
92 Ga0068861_100033914 3300005719 Bacteria 3770
93 Ga0068863_100585887 3300005841 Bacteria 1103
94 Ga0068858_100594462 3300005842 Bacteria 1073
95 Ga0068858_101557479 3300005842 Bacteria 652
96 Ga0068860_101227028 3300005843 Bacteria 770
97 Ga0068862_100298840 3300005844 Bacteria 1480
98 Ga0081540_1129933 3300005983 Bacteria 1030
99 Ga0081539_10001118 3300005985 Bacteria 48678
100 Ga0070717_10030543 3300006028 Bacteria 4329
101 Ga0070712_101146038 3300006175 Bacteria 676
102 Ga0075366_10041950 3300006195 Bacteria 2709
103 Ga0097621_100328347 3300006237 Bacteria 1356
104 Ga0068871_100267782 3300006358 Bacteria 1492
105 Ga0068871_100448448 3300006358 Bacteria 1156
106 Ga0068871_101589487 3300006358 Bacteria 619
107 Ga0075433_10386621 3300006852 Bacteria 1235
108 Ga0075429_101493637 3300006880 Bacteria 588
109 Ga0099794_10033908 3300007265 Bacteria 2402
110 Ga0105240_10019219 3300009093 Bacteria 9133
111 Ga0111539_10000634 3300009094 Bacteria 45403
112 Ga0111539_10754766 3300009094 Bacteria 1132
113 Ga0105241_10221208 3300009174 Bacteria 1591
114 Ga0105241_10921696 3300009174 Bacteria 813
115 Ga0105242_10658320 3300009176 Bacteria 1019
116 Ga0105248_10419644 3300009177 Bacteria 1507
117 Ga0105248_10862868 3300009177 Bacteria 1022
118 Ga0105237_10112223 3300009545 Bacteria 2718
119 Ga0105237_10134109 3300009545 Bacteria 2471
120 Ga0105237_10984502 3300009545 Bacteria 850
121 Ga0105237_10996601 3300009545 Bacteria 845
122 Ga0105238_10011646 3300009551 Bacteria 8862
123 Ga0105148_103206 3300009978 Bacteria 1159
124 Ga0105035_126220 3300009988 Bacteria 563
125 Ga0105028_111993 3300009993 Bacteria 915
126 Ga0105239_10064887 3300010375 Bacteria 4009
127 Ga0105246_11676588 3300011119 Bacteria 603
128 Ga0157373_10003692 3300013100 Bacteria 11581
129 Ga0157373_10102479 3300013100 Bacteria 2014
130 Ga0157373_10183995 3300013100 Bacteria 1471
131 Ga0157371_10002165 3300013102 Bacteria 19118
132 Ga0157371_10002801 3300013102 Bacteria 16341
133 Ga0157371_10007750 3300013102 Bacteria 8633
134 Ga0157371_10147714 3300013102 Bacteria 1676
135 Ga0157370_10327958 3300013104 Bacteria 1411
136 Ga0157370_10487934 3300013104 Bacteria 1132
137 Ga0157370_10490127 3300013104 Bacteria 1129
138 Ga0157370_11223723 3300013104 Bacteria 677
139 Ga0157369_10001735 3300013105 Bacteria 26499
140 Ga0157369_10194026 3300013105 Bacteria 2133
141 Ga0157369_10530141 3300013105 Bacteria 1218
142 Ga0157374_10922054 3300013296 Bacteria 891
143 Ga0157378_10723548 3300013297 Bacteria 1016
144 Ga0163162_10213383 3300013306 Unclassified 2060
145 Ga0163162_11189482 3300013306 Bacteria 865
146 Ga0157372_10001772 3300013307 Bacteria 23417
147 Ga0157372_10009170 3300013307 Bacteria 10514
148 Ga0157372_10466894 3300013307 Bacteria 1471
149 Ga0157372_11612557 3300013307 Bacteria 747
150 Ga0157375_10338847 3300013308 Bacteria 1669
151 Ga0157375_10771193 3300013308 Unclassified 1112
152 Ga0157375_11126620 3300013308 Bacteria 919
153 Ga0157515_148023 3300013875 Bacteria 704
154 Ga0163163_10633841 3300014325 Bacteria 1132
155 Ga0182008_10400809 3300014497 Bacteria 737
156 Ga0157377_10652284 3300014745 Bacteria 758
157 Ga0157376_10111925 3300014969 Bacteria 2404
158 Ga0157376_10923285 3300014969 Bacteria 892
159 Ga0206349_1439580 3300020075 Bacteria 591
160 Ga0206351_10689857 3300020077 Bacteria 1330
161 Ga0206352_10982106 3300020078 Bacteria 1434
162 Ga0206350_10546844 3300020080 Bacteria 2528
163 Ga0206354_10767743 3300020081 Bacteria 1214
164 Ga0206353_12037192 3300020082 Bacteria 2301
165 Ga0224712_10000890 3300022467 Bacteria 6412
166 Ga0209050_1004071 3300025298 Bacteria 10231
167 Ga0209257_1000634 3300025304 Bacteria 56352
168 Ga0207692_10313641 3300025898 Bacteria 958
169 Ga0207680_10166418 3300025903 Bacteria 1482
170 Ga0207680_10255695 3300025903 Bacteria 1211
171 Ga0207699_10156070 3300025906 Bacteria 1515
172 Ga0207645_10053041 3300025907 Bacteria 2591
173 Ga0207705_10054145 3300025909 Bacteria 2892
174 Ga0207705_10120400 3300025909 Bacteria 1947
175 Ga0207705_10993720 3300025909 Bacteria 648
176 Ga0207654_10011560 3300025911 Bacteria 4504
177 Ga0207707_10008164 3300025912 Bacteria 9084
178 Ga0207707_10012829 3300025912 Bacteria 7289
179 Ga0207707_10249779 3300025912 Bacteria 1541
180 Ga0207695_10081399 3300025913 Bacteria 3277
181 Ga0207671_10106684 3300025914 Bacteria 2127
182 Ga0207671_10231322 3300025914 Bacteria 1450
183 Ga0207693_10594787 3300025915 Bacteria 861
184 Ga0207663_10912428 3300025916 Bacteria 703
185 Ga0207660_10021112 3300025917 Bacteria 4376
186 Ga0207660_10167508 3300025917 Bacteria 1699
187 Ga0207660_10377581 3300025917 Bacteria 1139
188 Ga0207657_10001000 3300025919 Bacteria 30068
189 Ga0207657_10005177 3300025919 Bacteria 13680
190 Ga0207657_10115357 3300025919 Bacteria 2214
191 Ga0207649_10007276 3300025920 Bacteria 6018
192 Ga0207649_10024159 3300025920 Bacteria 3529
193 Ga0207649_10456170 3300025920 Bacteria 966
194 Ga0207649_11150798 3300025920 Bacteria 613
195 Ga0207652_10005395 3300025921 Bacteria 10372
196 Ga0207652_10306571 3300025921 Bacteria 1433
197 Ga0207681_10061557 3300025923 Bacteria 2581
198 Ga0207681_10810291 3300025923 Bacteria 782
199 Ga0207694_10029407 3300025924 Bacteria 4193
200 Ga0207700_10001544 3300025928 Bacteria 13050
201 Ga0207664_10004774 3300025929 Bacteria 9212
202 Ga0207664_10098143 3300025929 Bacteria 2415
203 Ga0207664_10101107 3300025929 Bacteria 2381
204 Ga0207664_10174296 3300025929 Bacteria 1843
205 Ga0207690_10003742 3300025932 Bacteria 9029
206 Ga0207690_10122047 3300025932 Bacteria 1894
207 Ga0207690_10139474 3300025932 Bacteria 1785
208 Ga0207690_11059045 3300025932 Bacteria 675
209 Ga0207706_10000636 3300025933 Bacteria 37249
210 Ga0207686_10389700 3300025934 Bacteria 1059
211 Ga0207691_10101189 3300025940 Bacteria 2572
212 Ga0207711_10940967 3300025941 Bacteria 803
213 Ga0207661_10001113 3300025944 Bacteria 17897
214 Ga0207661_10039335 3300025944 Bacteria 3711
215 Ga0207679_10042045 3300025945 Bacteria 3282
216 Ga0207679_10055347 3300025945 Bacteria 2924
217 Ga0207679_10061324 3300025945 Bacteria 2799
218 Ga0207679_10094504 3300025945 Bacteria 2321
219 Ga0207679_10368065 3300025945 Bacteria 1257
220 Ga0207667_10004058 3300025949 Bacteria 17984
221 Ga0207667_10014819 3300025949 Bacteria 8868
222 Ga0207667_10036626 3300025949 Bacteria 5255
223 Ga0207667_10146531 3300025949 Bacteria 2430
224 Ga0207667_10786833 3300025949 Bacteria 949
225 Ga0207640_10030767 3300025981 Bacteria 3310
226 Ga0207640_10090625 3300025981 Bacteria 2116
227 Ga0207658_10085159 3300025986 Bacteria 2434
228 Ga0207658_10242051 3300025986 Bacteria 1529
229 Ga0207658_10462578 3300025986 Bacteria 1125
230 Ga0207639_10009710 3300026041 Bacteria 6647
231 Ga0207639_10020131 3300026041 Bacteria 4774
232 Ga0207639_10597037 3300026041 Bacteria 1018
233 Ga0207639_11142403 3300026041 Bacteria 731
234 Ga0207678_10005532 3300026067 Bacteria 11289
235 Ga0207678_10008981 3300026067 Bacteria 8796
236 Ga0207702_10004356 3300026078 Bacteria 12621
237 Ga0207702_10004529 3300026078 Bacteria 12323
238 Ga0207702_10020209 3300026078 Bacteria 5516
239 Ga0207702_10060420 3300026078 Bacteria 3231
240 Ga0207702_10195026 3300026078 Bacteria 1874
241 Ga0207641_11017116 3300026088 Bacteria 826
242 Ga0207674_10000781 3300026116 Bacteria 41513
243 Ga0207674_10001128 3300026116 Bacteria 34654
244 Ga0207675_100604363 3300026118 Bacteria 1100
245 Ga0207683_10095240 3300026121 Unclassified 2654
246 Ga0207698_10002045 3300026142 Bacteria 11900
247 Ga0207698_10022840 3300026142 Bacteria 4359
248 Ga0209982_1006530 3300027552 Bacteria 1697
249 Ga0209974_10012416 3300027876 Bacteria 2848
250 Ga0207428_10000460 3300027907 Bacteria 49066
251 Ga0268266_10235376 3300028379 Unclassified 1688
252 Ga0268266_10636935 3300028379 Bacteria 1025
253 Ga0268264_10983837 3300028381 Bacteria 850
254 Ga0265331_10254758 3300031250 Bacteria 787
255 Ga0265327_10105306 3300031251 Bacteria 1355
256 Ga0307508_10078350 3300031616 Bacteria 2885
257 Ga0307508_10272024 3300031616 Bacteria 1288
258 Ga0307405_10884948 3300031731 Bacteria 754
259 Ga0307416_100455289 3300032002 Bacteria 1333
260 Ga0373931_0657420 3300035691 Bacteria 689
261 Ga0436364_1197368 3300037853 Bacteria 895
262 Ga0395901_0006708 3300038443 Bacteria 11635
263 Ga0395901_0216909 3300038443 Bacteria 2001
264 Ga0436365_1318796 3300039437 Bacteria 812
265 Ga0439441_057352 3300042001 Bacteria 814
266 Ga0439455_0098398 3300042012 Bacteria 807
267 Ga0466966_0014309 3300044684 Bacteria 5253
268 Ga0466963_0337318 3300044694 Bacteria 1061
269 Ga0466963_0486021 3300044694 Bacteria 872
270 Ga0453684_0134857 3300044712 Bacteria 2958
271 Ga0453684_1008768 3300044712 Bacteria 885
272 Ga0466971_0538620 3300044719 Unclassified 579
273 Ga0466960_0140863 3300044901 Bacteria 1281
274 Ga0466958_0404847 3300045836 Bacteria 881
275 Ga0466967_1977790 3300045976 Bacteria 580
276 Ga0466967_2374599 3300045976 Bacteria 526
277 Ga0495638_0013581 3300046460 Bacteria 5536
278 Ga0495666_0014139 3300046526 Bacteria 3978
279 Ga0495586_0110489 3300046535 Bacteria 1530
280 Ga0495656_0208966 3300046615 Bacteria 972
281 Ga0495686_0000196 3300047472 Bacteria 112875
282 Ga0495686_0015476 3300047472 Bacteria 5206
283 Ga0495686_0209072 3300047472 Bacteria 1116
284 Ga0496100_0058719 3300048903 Bacteria 2526
285 Ga0496101_0067333 3300048904 Bacteria 2615
286 Ga0496102_0007224 3300048905 Bacteria 9480
287 Ga0496103_0057782 3300048906 Bacteria 2409
288 Ga0496104_0060314 3300048907 Bacteria 3594
289 Ga0496104_0696651 3300048907 Bacteria 924
290 Ga0496105_0265544 3300048908 Bacteria 1387
291 Ga0496106_0113229 3300048909 Bacteria 2114
292 Ga0496107_0012466 3300048910 Bacteria 5933
293 Ga0496107_1125399 3300048910 Bacteria 566
294 Ga0496108_0296485 3300048911 Bacteria 1408
295 Ga0496109_0158641 3300048912 Bacteria 2119
296 Ga0496110_1862028 3300048913 Bacteria 512
297 Ga0496112_0028424 3300048915 Bacteria 5397
298 Ga0496113_0083367 3300048916 Bacteria 2453
299 Ga0496113_0690507 3300048916 Bacteria 815
300 Ga0501033_0054013 3300049570 Bacteria 2973
301 Ga0501034_0435445 3300049571 Bacteria 1230
302 Ga0501037_1092621 3300049573 Bacteria 517
303 Ga0501038_0441717 3300049574 Bacteria 1001
304 Ga0501039_0013754 3300049575 Bacteria 6191
305 Ga0501040_0017760 3300049576 Bacteria 4721
306 Ga0501041_0007447 3300049577 Bacteria 6426
307 Ga0501041_0096853 3300049577 Bacteria 1824
308 Ga0501042_0135819 3300049578 Bacteria 1773
309 Ga0501043_0043147 3300049579 Bacteria 3545
310 Ga0501046_0512561 3300049580 Bacteria 858
311 Ga0501047_0280406 3300049581 Bacteria 1511
312 Ga0501048_0003244 3300049582 Bacteria 12392
313 Ga0501071_0002236 3300049587 Bacteria 11644
314 Ga0501071_0063734 3300049587 Bacteria 2673
315 Ga0501072_0191811 3300049588 Bacteria 1629
316 Ga0501072_0439536 3300049588 Bacteria 1033
317 Ga0501074_0071440 3300049590 Bacteria 2495
318 Ga0501075_0002319 3300049591 Bacteria 12628
319 Ga0501075_0026535 3300049591 Bacteria 4266
320 Ga0501076_0001659 3300049592 Bacteria 15037
321 Ga0501076_0004548 3300049592 Bacteria 9879
322 Ga0501079_0006250 3300049741 Bacteria 8938
323 Ga0501079_0378804 3300049741 Bacteria 1109
324 Ga0501080_0088051 3300049742 Bacteria 2884
325 Ga0501081_0012506 3300049743 Bacteria 5581
326 Ga0501083_0055254 3300049744 Bacteria 2663
327 Ga0501083_0632997 3300049744 Unclassified 696
328 Ga0501035_0521231 3300049822 Bacteria 976
329 Ga0501044_0529951 3300049823 Bacteria 1077
330 Ga0501044_0844128 3300049823 Bacteria 793
331 Ga0501045_0004036 3300049824 Bacteria 10118
332 nmdc:mga03n38_84134_c1 3300050490 Bacteria 1501
333 nmdc:mga00v17_406593_c1 3300050491 Bacteria 884
334 nmdc:mga0k408_174718_c1 3300050493 Bacteria 1281
335 nmdc:mga08y16_1297900_c1 3300050511 Bacteria 695
336 nmdc:mga08y16_96_c1 3300050511 Bacteria 74719
337 Ga0500578_0310871 3300053086 Unclassified 932
338 Ga0500651_0042723 3300053093 Bacteria 2856
339 Ga0500566_0244817 3300053094 Bacteria 876
340 Ga0500556_0051279 3300053104 Bacteria 1494
341 Ga0500595_003384 3300053119 Bacteria 7470
342 Ga0500655_030473 3300053133 Bacteria 1038
343 Ga0501084_0048001 3300054114 Bacteria 3575
344 Ga0501082_0010559 3300060353 Bacteria 7948
345 Ga0501082_0227234 3300060353 Bacteria 1624
346 Ga0530510_0008582 3300061734 Bacteria 7137
347 2644642186 2643221716 Bacteria 4986332
348 Ga0163162_11153764
349 JGI25406J46586_10000372
350 Ga0055531_10010433
351 Ga0065707_10638095
352 Ga0070658_10062119
353 Ga0070658_11024857
354 Ga0070676_10028188
355 Ga0070683_100013656
356 Ga0070683_100135397
357 Ga0070670_100279620
358 Ga0070670_101334815
359 Ga0068869_100091678
360 Ga0068869_100627503
361 Ga0070666_10078067
362 Ga0070666_10282380
363 Ga0070680_100091845
364 Ga0070680_100170925
365 Ga0070680_100331777
366 Ga0070682_101026400
367 Ga0068868_100261261
368 Ga0070660_100002911
369 Ga0070660_100147652
370 Ga0070660_101125193
371 Ga0070689_100381314
372 Ga0070691_10003458
373 Ga0070661_100008486
374 Ga0070661_101473574
375 Ga0070692_10097645
376 Ga0070669_100145832
377 Ga0070669_100193023
378 Ga0070675_100151639
379 Ga0070671_100048617
380 Ga0070671_101275244
381 Ga0070673_100057150
382 Ga0070688_100199197
383 Ga0070659_100006222
384 Ga0070659_100073398
385 Ga0070667_100099921
386 Ga0070667_100348586
387 Ga0070667_100710579
388 Ga0070714_100001488
389 Ga0070714_100032007
390 Ga0070714_100085593
391 Ga0070714_100209374
392 Ga0070714_100251921
393 Ga0070713_100001348
394 Ga0070713_101388714
395 Ga0070710_10226841
396 Ga0070711_100295624
397 Ga0070663_100002891
398 Ga0070663_100173778
399 Ga0070662_100001187
400 Ga0070681_10018309
401 Ga0070681_10098532
402 Ga0070681_10144670
403 Ga0070681_10648347
404 Ga0068867_101018078
405 Ga0070679_100009528
406 Ga0070679_100100932
407 Ga0070679_100365862
408 Ga0070684_100000551
409 Ga0070684_100008103
410 Ga0070684_100400555
411 Ga0068853_100045824
412 Ga0068853_100061149
413 Ga0068853_101184197
414 Ga0070672_100720856
415 Ga0070693_100366082
416 Ga0070665_100155248
417 Ga0070665_100280526
418 Ga0070665_100688619
419 Ga0068855_100001032
420 Ga0068855_100077535
421 Ga0068855_100189630
422 Ga0068855_100285500
423 Ga0068855_100373345
424 Ga0070664_100030127
425 Ga0070664_100045706
426 Ga0070664_100099854
427 Ga0070664_100241402
428 Ga0068857_100003485
429 Ga0068857_100094444
430 Ga0068854_100009795
431 Ga0068854_100022606
432 Ga0068856_100003570
433 Ga0068856_100004391
434 Ga0068856_100042803
435 Ga0068856_100059243
436 Ga0068852_100055950
437 Ga0068852_100237150
438 Ga0068852_100367350
439 Ga0068861_100033914
440 Ga0068863_100585887
441 Ga0068858_100594462
442 Ga0068858_101557479
443 Ga0068860_101227028
444 Ga0068862_100298840
445 Ga0081540_1129933
446 Ga0081539_10001118
447 Ga0070717_10030543
448 Ga0070712_101146038
449 Ga0075366_10041950
450 Ga0097621_100328347
451 Ga0068871_100267782
452 Ga0068871_100448448
453 Ga0068871_101589487
454 Ga0075433_10386621
455 Ga0075429_101493637
456 Ga0099794_10033908
457 Ga0105240_10019219
458 Ga0111539_10000634
459 Ga0111539_10754766
460 Ga0105241_10221208
461 Ga0105241_10921696
462 Ga0105242_10658320
463 Ga0105248_10419644
464 Ga0105248_10862868
465 Ga0105237_10112223
466 Ga0105237_10134109
467 Ga0105237_10984502
468 Ga0105237_10996601
469 Ga0105238_10011646
470 Ga0105148_103206
471 Ga0105035_126220
472 Ga0105028_111993
473 Ga0105239_10064887
474 Ga0105246_11676588
475 Ga0157373_10003692
476 Ga0157373_10102479
477 Ga0157373_10183995
478 Ga0157371_10002165
479 Ga0157371_10002801
480 Ga0157371_10007750
481 Ga0157371_10147714
482 Ga0157370_10327958
483 Ga0157370_10487934
484 Ga0157370_10490127
485 Ga0157370_11223723
486 Ga0157369_10001735
487 Ga0157369_10194026
488 Ga0157369_10530141
489 Ga0157374_10922054
490 Ga0157378_10723548
491 Ga0163162_10213383
492 Ga0163162_11189482
493 Ga0157372_10001772
494 Ga0157372_10009170
495 Ga0157372_10466894
496 Ga0157372_11612557
497 Ga0157375_10338847
498 Ga0157375_10771193
499 Ga0157375_11126620
500 Ga0157515_148023
501 Ga0163163_10633841
502 Ga0182008_10400809
503 Ga0157377_10652284
504 Ga0157376_10111925
505 Ga0157376_10923285
506 Ga0206349_1439580
507 Ga0206351_10689857
508 Ga0206352_10982106
509 Ga0206350_10546844
510 Ga0206354_10767743
511 Ga0206353_12037192
512 Ga0224712_10000890
513 Ga0209050_1004071
514 Ga0209257_1000634
515 Ga0207692_10313641
516 Ga0207680_10166418
517 Ga0207680_10255695
518 Ga0207699_10156070
519 Ga0207645_10053041
520 Ga0207705_10054145
521 Ga0207705_10120400
522 Ga0207705_10993720
523 Ga0207654_10011560
524 Ga0207707_10008164
525 Ga0207707_10012829
526 Ga0207707_10249779
527 Ga0207695_10081399
528 Ga0207671_10106684
529 Ga0207671_10231322
530 Ga0207693_10594787
531 Ga0207663_10912428
532 Ga0207660_10021112
533 Ga0207660_10167508
534 Ga0207660_10377581
535 Ga0207657_10001000
536 Ga0207657_10005177
537 Ga0207657_10115357
538 Ga0207649_10007276
539 Ga0207649_10024159
540 Ga0207649_10456170
541 Ga0207649_11150798
542 Ga0207652_10005395
543 Ga0207652_10306571
544 Ga0207681_10061557
545 Ga0207681_10810291
546 Ga0207694_10029407
547 Ga0207700_10001544
548 Ga0207664_10004774
549 Ga0207664_10098143
550 Ga0207664_10101107
551 Ga0207664_10174296
552 Ga0207690_10003742
553 Ga0207690_10122047
554 Ga0207690_10139474
555 Ga0207690_11059045
556 Ga0207706_10000636
557 Ga0207686_10389700
558 Ga0207691_10101189
559 Ga0207711_10940967
560 Ga0207661_10001113
561 Ga0207661_10039335
562 Ga0207679_10042045
563 Ga0207679_10055347
564 Ga0207679_10061324
565 Ga0207679_10094504
566 Ga0207679_10368065
567 Ga0207667_10004058
568 Ga0207667_10014819
569 Ga0207667_10036626
570 Ga0207667_10146531
571 Ga0207667_10786833
572 Ga0207640_10030767
573 Ga0207640_10090625
574 Ga0207658_10085159
575 Ga0207658_10242051
576 Ga0207658_10462578
577 Ga0207639_10009710
578 Ga0207639_10020131
579 Ga0207639_10597037
580 Ga0207639_11142403
581 Ga0207678_10005532
582 Ga0207678_10008981
583 Ga0207702_10004356
584 Ga0207702_10004529
585 Ga0207702_10020209
586 Ga0207702_10060420
587 Ga0207702_10195026
588 Ga0207641_11017116
589 Ga0207674_10000781
590 Ga0207674_10001128
591 Ga0207675_100604363
592 Ga0207683_10095240
593 Ga0207698_10002045
594 Ga0207698_10022840
595 Ga0209982_1006530
596 Ga0209974_10012416
597 Ga0207428_10000460
598 Ga0268266_10235376
599 Ga0268266_10636935
600 Ga0268264_10983837
601 Ga0265331_10254758
602 Ga0265327_10105306
603 Ga0307508_10078350
604 Ga0307508_10272024
605 Ga0307405_10884948
606 Ga0307416_100455289
607 Ga0373931_0657420
608 Ga0436364_1197368
609 Ga0395901_0006708
610 Ga0395901_0216909
611 Ga0436365_1318796
612 Ga0439441_057352
613 Ga0439455_0098398
614 Ga0466966_0014309
615 Ga0466963_0337318
616 Ga0466963_0486021
617 Ga0453684_0134857
618 Ga0453684_1008768
619 Ga0466971_0538620
620 Ga0466960_0140863
621 Ga0466958_0404847
622 Ga0466967_1977790
623 Ga0466967_2374599
624 Ga0495638_0013581
625 Ga0495666_0014139
626 Ga0495586_0110489
627 Ga0495656_0208966
628 Ga0495686_0000196
629 Ga0495686_0015476
630 Ga0495686_0209072
631 Ga0496100_0058719
632 Ga0496101_0067333
633 Ga0496102_0007224
634 Ga0496103_0057782
635 Ga0496104_0060314
636 Ga0496104_0696651
637 Ga0496105_0265544
638 Ga0496106_0113229
639 Ga0496107_0012466
640 Ga0496107_1125399
641 Ga0496108_0296485
642 Ga0496109_0158641
643 Ga0496110_1862028
644 Ga0496112_0028424
645 Ga0496113_0083367
646 Ga0496113_0690507
647 Ga0501033_0054013
648 Ga0501034_0435445
649 Ga0501037_1092621
650 Ga0501038_0441717
651 Ga0501039_0013754
652 Ga0501040_0017760
653 Ga0501041_0007447
654 Ga0501041_0096853
655 Ga0501042_0135819
656 Ga0501043_0043147
657 Ga0501046_0512561
658 Ga0501047_0280406
659 Ga0501048_0003244
660 Ga0501071_0002236
661 Ga0501071_0063734
662 Ga0501072_0191811
663 Ga0501072_0439536
664 Ga0501074_0071440
665 Ga0501075_0002319
666 Ga0501075_0026535
667 Ga0501076_0001659
668 Ga0501076_0004548
669 Ga0501079_0006250
670 Ga0501079_0378804
671 Ga0501080_0088051
672 Ga0501081_0012506
673 Ga0501083_0055254
674 Ga0501083_0632997
675 Ga0501035_0521231
676 Ga0501044_0529951
677 Ga0501044_0844128
678 Ga0501045_0004036
679 nmdc:mga03n38_84134_c1
680 nmdc:mga00v17_406593_c1
681 nmdc:mga0k408_174718_c1
682 nmdc:mga08y16_1297900_c1
683 nmdc:mga08y16_96_c1
684 Ga0500578_0310871
685 Ga0500651_0042723
686 Ga0500566_0244817
687 Ga0500556_0051279
688 Ga0500595_003384
689 Ga0500655_030473
690 Ga0501084_0048001
691 Ga0501082_0010559
692 Ga0501082_0227234
693 Ga0530510_0008582
694 2644642186

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02627

CMD

Carboxymuconolactone decarboxylase family

21

103

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xw1-assembly1.cif.gz_A the crystal structure of ahpd from pseudomonas aeruginosa 0.9724 12 140
2ijc-assembly2.cif.gz_I structure of a conserved protein of unknown function pa0269 from pseudomonas aeruginosa 0.9589 1 141
2gmy-assembly1.cif.gz_C crystal structure of a protein of unknown function atu0492 from agrobacterium tumefaciens, putative antioxidant defence protein ahpd 0.9427 2 144
7xw1-assembly1.cif.gz_A the crystal structure of ahpd from pseudomonas aeruginosa 0.9368 12 140
3bey-assembly1.cif.gz_E crystal structure of the protein o27018 from methanobacterium thermoautotrophicum. northeast structural genomics consortium target tt217 0.9252 13 75
ID Description Score Start End Superfamily
2ijcF00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9509 2 139 1.20.1290.10
2o4dA00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9478 2 139 1.20.1290.10
af_Q2FVE0_2_139_1.20.1290.10 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9392 8 140 1.20.1290.10
2ijcF00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9179 2 139 1.20.1290.10
2gmyF00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9146 2 149 1.20.1290.10
ID Description Score Start End GO Terms
AF-A0A497ZF99-F1-model_v4 deleted 0.9894 14 140
AF-A0A512N1X1-F1-model_v4 Alkyl hydroperoxide reductase AhpD 0.989 17 140 GO:0051920
AF-A0A1Q3MNR0-F1-model_v4 Carboxymuconolactone decarboxylase-like domain-containing protein 0.9884 12 140 GO:0051920
AF-A0A2C6WST3-F1-model_v4 Carboxymuconolactone decarboxylase-like domain-containing protein 0.9873 30 140 GO:0051920
AF-A0A5B8U6P3-F1-model_v4 Carboxymuconolactone decarboxylase family protein 0.9871 13 139 GO:0051920

Map