F409579

General Info

Members Datasets Scaffolds Average Seq Length
329 221 658 287

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100175329|Ga0070679_1001753293
Length 316
Sequence MTCPDIPPHNHAMDIDSLVAIDVHTHVHRSVNAPKTNPEDNEHLAAMAAYFKTAAASFTVDDLAAYYREQHMSANAPEDPSRATPMEVIERSREHADVIIPFGSVDPARGAEAVKMAKRQIEAGARGFKFHPSSQAFMPNDRAVYPIYEVIQEAGVPALFHTGQTGAGAGTRGGGGIRLAYSNPMHLDDVAVDFPDMPIILAHPSFPWQEEALSVATHKPQVYIDLSGWSPKYFPPILIQYANTLLKHKMLFGTDFPVLTPERWMSDLEKIAIRDEVKPGIFKDNAAKLFGLVAELSSTRQIRGMIAKTFGVVKAF

Samples

Sample ID Description Type Environment
1 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
37 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013875 Rhizosphere microbial communities from switchgrass unharvested rhizosphere in Austin, TX, USA - RS_233 Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
103 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
106 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
109 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
110 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
111 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
112 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
113 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
114 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
115 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
116 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
117 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
118 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
119 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
120 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
121 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
122 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
123 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
124 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
125 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
126 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
127 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
128 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
131 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
132 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
133 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
134 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
135 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
136 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
137 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
138 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
139 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
140 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
141 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
142 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
143 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
144 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
145 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
146 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
147 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
148 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
149 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
150 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
151 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
152 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
153 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
154 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
155 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
156 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
157 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
158 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
159 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
160 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
161 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
162 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
163 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
164 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
165 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
166 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
167 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
168 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
169 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
170 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
171 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
172 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
173 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
174 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
175 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
176 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
177 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
178 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
179 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
180 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
181 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
182 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
186 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
187 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
188 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
189 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
190 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
191 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
192 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
193 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
194 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
195 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
196 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
197 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
198 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
199 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
200 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
201 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
202 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
203 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
204 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
205 2643221558 Rhizobium sp. Root149 Isolate Unclassified
206 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
207 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
208 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
209 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
210 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
211 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
212 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
213 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
214 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
215 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
216 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
217 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
218 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
219 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
220 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
221 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.27
Metatranscriptomes 2.43
Isolates 7.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.04
Nodule 2.43
Rhizoplane 1.82
Rhizosphere 84.8
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070679_100175329 3300005530 Bacteria 2116
2 Ga0070658_10014103 3300005327 Bacteria 6416
3 Ga0070683_100027522 3300005329 Bacteria 5128
4 Ga0070683_100112881 3300005329 Bacteria 2564
5 Ga0070683_100645167 3300005329 Bacteria 1014
6 Ga0070677_10038174 3300005333 Bacteria 1878
7 Ga0068869_100388162 3300005334 Bacteria 1146
8 Ga0070680_100003583 3300005336 Bacteria 11593
9 Ga0070680_100026171 3300005336 Bacteria 4666
10 Ga0070680_100046728 3300005336 Bacteria 3523
11 Ga0070680_100087379 3300005336 Bacteria 2578
12 Ga0070680_100267269 3300005336 Bacteria 1448
13 Ga0070680_100392893 3300005336 Bacteria 1182
14 Ga0070680_100426397 3300005336 Bacteria 1132
15 Ga0070680_100474256 3300005336 Bacteria 1069
16 Ga0070682_100397881 3300005337 Bacteria 1041
17 Ga0070691_10177278 3300005341 Bacteria 1107
18 Ga0070661_100028588 3300005344 Bacteria 4022
19 Ga0070661_100166020 3300005344 Bacteria 1674
20 Ga0070659_100233578 3300005366 Bacteria 1520
21 Ga0070709_10048122 3300005434 Bacteria 2659
22 Ga0070709_10119023 3300005434 Bacteria 1787
23 Ga0070714_100005870 3300005435 Bacteria 9418
24 Ga0070714_100032650 3300005435 Bacteria 4347
25 Ga0070714_100096429 3300005435 Bacteria 2598
26 Ga0070714_100173333 3300005435 Bacteria 1959
27 Ga0070713_100232703 3300005436 Bacteria 1676
28 Ga0070713_100238927 3300005436 Bacteria 1654
29 Ga0070713_100405115 3300005436 Bacteria 1274
30 Ga0070710_10016874 3300005437 Bacteria 3726
31 Ga0070710_10192303 3300005437 Bacteria 1284
32 Ga0070711_100197982 3300005439 Bacteria 1548
33 Ga0070700_100018948 3300005441 Bacteria 3965
34 Ga0070694_100118445 3300005444 Bacteria 1897
35 Ga0070708_100624755 3300005445 Bacteria 1015
36 Ga0070663_100022859 3300005455 Bacteria 4184
37 Ga0070681_10042578 3300005458 Bacteria 4550
38 Ga0070681_10068003 3300005458 Bacteria 3530
39 Ga0070681_10093835 3300005458 Bacteria 2950
40 Ga0070681_10113383 3300005458 Bacteria 2650
41 Ga0070681_10548555 3300005458 Bacteria 1070
42 Ga0068867_100003966 3300005459 Bacteria 10408
43 Ga0070706_100008459 3300005467 Bacteria 9584
44 Ga0070706_100083699 3300005467 Bacteria 2956
45 Ga0070706_100249101 3300005467 Bacteria 1658
46 Ga0070707_100042119 3300005468 Bacteria 4370
47 Ga0070698_100004792 3300005471 Bacteria 14852
48 Ga0070698_100256150 3300005471 Bacteria 1682
49 Ga0070698_100540037 3300005471 Bacteria 1105
50 Ga0070679_100026289 3300005530 Bacteria 5716
51 Ga0070679_100058713 3300005530 Bacteria 3834
52 Ga0070679_100068559 3300005530 Bacteria 3538
53 Ga0070679_100078234 3300005530 Bacteria 3296
54 Ga0070684_100017819 3300005535 Bacteria 5837
55 Ga0070684_100166060 3300005535 Bacteria 2003
56 Ga0070686_100246289 3300005544 Bacteria 1303
57 Ga0070696_100438387 3300005546 Bacteria 1029
58 Ga0070704_100452516 3300005549 Bacteria 1106
59 Ga0068855_100001319 3300005563 Bacteria 30718
60 Ga0068855_100008729 3300005563 Bacteria 12253
61 Ga0068855_100017812 3300005563 Bacteria 8539
62 Ga0068857_100311385 3300005577 Bacteria 1452
63 Ga0068854_100192727 3300005578 Bacteria 1598
64 Ga0068856_100421507 3300005614 Bacteria 1355
65 Ga0068864_100002594 3300005618 Bacteria 14929
66 Ga0068864_100083357 3300005618 Bacteria 2808
67 Ga0068861_100016975 3300005719 Bacteria 5162
68 Ga0068862_100003589 3300005844 Bacteria 13286
69 Ga0068862_100324103 3300005844 Bacteria 1423
70 Ga0081538_10003314 3300005981 Bacteria 15264
71 Ga0070715_10051210 3300006163 Bacteria 1776
72 Ga0070712_100412345 3300006175 Bacteria 1118
73 Ga0075428_100005577 3300006844 Bacteria 13988
74 Ga0075428_100111457 3300006844 Bacteria 2981
75 Ga0075428_100305741 3300006844 Bacteria 1709
76 Ga0075430_100048493 3300006846 Bacteria 3586
77 Ga0075431_100065442 3300006847 Bacteria 3754
78 Ga0075431_100069518 3300006847 Bacteria 3633
79 Ga0075431_100290101 3300006847 Bacteria 1655
80 Ga0075434_100017732 3300006871 Bacteria 6864
81 Ga0075429_100003530 3300006880 Bacteria 13324
82 Ga0075429_100047811 3300006880 Bacteria 3721
83 Ga0075429_100080943 3300006880 Bacteria 2832
84 Ga0068865_100103816 3300006881 Bacteria 2085
85 Ga0099826_10000079 3300006948 Bacteria 50419
86 Ga0105240_10003623 3300009093 Bacteria 23921
87 Ga0105240_10034991 3300009093 Bacteria 6476
88 Ga0111539_10226761 3300009094 Bacteria 2176
89 Ga0111539_10259353 3300009094 Bacteria 2024
90 Ga0111539_10537811 3300009094 Bacteria 1361
91 Ga0114129_10019707 3300009147 Bacteria 9602
92 Ga0114129_10075482 3300009147 Bacteria 4693
93 Ga0114129_10194329 3300009147 Bacteria 2753
94 Ga0105243_10287414 3300009148 Bacteria 1484
95 Ga0105238_10005253 3300009551 Bacteria 12805
96 Ga0105249_10036440 3300009553 Bacteria 4462
97 Ga0105035_100530 3300009988 Bacteria 2351
98 Ga0105239_10218607 3300010375 Bacteria 2136
99 Ga0105239_10387279 3300010375 Bacteria 1581
100 Ga0157370_10014407 3300013104 Bacteria 8084
101 Ga0157370_10016900 3300013104 Bacteria 7376
102 Ga0157370_10268648 3300013104 Bacteria 1576
103 Ga0157369_10014032 3300013105 Bacteria 9051
104 Ga0157369_10032297 3300013105 Bacteria 5759
105 Ga0157369_10064962 3300013105 Bacteria 3929
106 Ga0157372_10201961 3300013307 Bacteria 2303
107 Ga0157515_127289 3300013875 Bacteria 1305
108 Ga0157380_10002041 3300014326 Bacteria 13497
109 Ga0157377_10148127 3300014745 Bacteria 1449
110 Ga0163161_10225167 3300017792 Bacteria 1454
111 Ga0163161_10466159 3300017792 Bacteria 1023
112 Ga0197907_11352878 3300020069 Bacteria 1491
113 Ga0206356_11149137 3300020070 Bacteria 3582
114 Ga0206349_1915311 3300020075 Bacteria 1272
115 Ga0206352_10474100 3300020078 Bacteria 1340
116 Ga0224712_10002018 3300022467 Bacteria 4920
117 Ga0224712_10150510 3300022467 Bacteria 1031
118 Ga0224712_10179786 3300022467 Bacteria 952
119 Ga0209025_1002310 3300025294 Bacteria 20657
120 Ga0209758_1000291 3300025297 Bacteria 98850
121 Ga0209758_1030577 3300025297 Bacteria 2228
122 Ga0209050_1005856 3300025298 Bacteria 7529
123 Ga0209051_1019263 3300025303 Bacteria 2985
124 Ga0209257_1004230 3300025304 Bacteria 11349
125 Ga0207692_10061885 3300025898 Bacteria 1941
126 Ga0207647_10050530 3300025904 Bacteria 2573
127 Ga0207685_10008210 3300025905 Bacteria 2959
128 Ga0207699_10026352 3300025906 Bacteria 3203
129 Ga0207643_10019276 3300025908 Bacteria 3738
130 Ga0207705_10050048 3300025909 Bacteria 3007
131 Ga0207705_10298132 3300025909 Bacteria 1236
132 Ga0207684_10051743 3300025910 Bacteria 3485
133 Ga0207684_10156341 3300025910 Bacteria 1962
134 Ga0207707_10000755 3300025912 Bacteria 31867
135 Ga0207707_10021313 3300025912 Bacteria 5665
136 Ga0207707_10081623 3300025912 Bacteria 2822
137 Ga0207695_10159273 3300025913 Bacteria 2190
138 Ga0207693_10014196 3300025915 Bacteria 6411
139 Ga0207660_10017321 3300025917 Bacteria 4785
140 Ga0207660_10054822 3300025917 Bacteria 2846
141 Ga0207660_10139181 3300025917 Bacteria 1854
142 Ga0207660_10141652 3300025917 Bacteria 1839
143 Ga0207652_10001345 3300025921 Bacteria 21823
144 Ga0207652_10016042 3300025921 Bacteria 6109
145 Ga0207652_10029709 3300025921 Bacteria 4573
146 Ga0207646_10070741 3300025922 Bacteria 3116
147 Ga0207646_10103702 3300025922 Bacteria 2551
148 Ga0207681_10007107 3300025923 Bacteria 6863
149 Ga0207694_10275648 3300025924 Bacteria 1380
150 Ga0207700_10020595 3300025928 Bacteria 4483
151 Ga0207700_10258841 3300025928 Bacteria 1489
152 Ga0207664_10004591 3300025929 Bacteria 9359
153 Ga0207664_10020595 3300025929 Bacteria 4891
154 Ga0207664_10038743 3300025929 Bacteria 3697
155 Ga0207664_10100963 3300025929 Bacteria 2383
156 Ga0207690_10100036 3300025932 Bacteria 2068
157 Ga0207704_10025867 3300025938 Bacteria 3210
158 Ga0207665_10005557 3300025939 Bacteria 8408
159 Ga0207665_10083490 3300025939 Bacteria 2203
160 Ga0207661_10001024 3300025944 Bacteria 18535
161 Ga0207661_10189484 3300025944 Bacteria 1802
162 Ga0207679_10333003 3300025945 Bacteria 1318
163 Ga0207667_10013433 3300025949 Bacteria 9370
164 Ga0207712_10011044 3300025961 Bacteria 5749
165 Ga0207648_10002815 3300026089 Bacteria 18438
166 Ga0207674_10072855 3300026116 Bacteria 3450
167 Ga0207675_100915798 3300026118 Bacteria 893
168 Ga0207683_10312294 3300026121 Bacteria 1439
169 Ga0209969_1006106 3300027360 Bacteria 1694
170 Ga0209981_1002486 3300027378 Bacteria 2350
171 Ga0209999_1001483 3300027543 Bacteria 4026
172 Ga0209999_1006262 3300027543 Bacteria 2137
173 Ga0209282_1000162 3300027666 Bacteria 38224
174 Ga0209966_1008662 3300027695 Bacteria 1809
175 Ga0209974_10009467 3300027876 Bacteria 3307
176 Ga0207428_10060939 3300027907 Bacteria 2989
177 Ga0268265_10006428 3300028380 Bacteria 7965
178 Ga0268264_10452825 3300028381 Bacteria 1244
179 Ga0265337_1000173 3300028556 Bacteria 33851
180 Ga0265337_1000495 3300028556 Bacteria 20897
181 Ga0265326_10001937 3300028558 Bacteria 7085
182 Ga0265319_1005974 3300028563 Bacteria 5723
183 Ga0265334_10000107 3300028573 Bacteria 55523
184 Ga0265322_10004520 3300028654 Bacteria 4136
185 Ga0265336_10001729 3300028666 Bacteria 9589
186 Ga0307515_10000556 3300028794 Bacteria 88174
187 Ga0265338_10000757 3300028800 Bacteria 55097
188 Ga0265338_10152612 3300028800 Bacteria 1793
189 Ga0265324_10003751 3300029957 Bacteria 7104
190 Ga0265332_10015021 3300031238 Bacteria 3422
191 Ga0265320_10000103 3300031240 Bacteria 72829
192 Ga0265320_10005274 3300031240 Bacteria 8328
193 Ga0307513_10013705 3300031456 Bacteria 9941
194 Ga0307408_100191257 3300031548 Bacteria 1649
195 Ga0265313_10003493 3300031595 Bacteria 12677
196 Ga0265313_10029668 3300031595 Bacteria 2826
197 Ga0307508_10248326 3300031616 Bacteria 1376
198 Ga0265314_10026290 3300031711 Bacteria 4374
199 Ga0265314_10036149 3300031711 Bacteria 3592
200 Ga0265342_10004422 3300031712 Bacteria 11083
201 Ga0307413_10037406 3300031824 Bacteria 2803
202 Ga0307406_10078156 3300031901 Bacteria 2191
203 Ga0307407_10037022 3300031903 Bacteria 2693
204 Ga0307409_100000532 3300031995 Bacteria 16458
205 Ga0307416_100002579 3300032002 Bacteria 10467
206 Ga0307416_100086331 3300032002 Bacteria 2675
207 Ga0307415_100000144 3300032126 Bacteria 31695
208 Ga0373929_0005319 3300035085 Bacteria 2313
209 Ga0373934_0011290 3300035086 Bacteria 3361
210 Ga0373953_0038327 3300035117 Bacteria 1895
211 Ga0373954_0000075 3300035118 Bacteria 35026
212 Ga0373954_0027691 3300035118 Bacteria 2603
213 Ga0373956_0032177 3300035119 Bacteria 2301
214 Ga0373957_0008613 3300035120 Bacteria 3313
215 Ga0373955_0031571 3300035172 Bacteria 2775
216 Ga0316574_0133113 3300035398 Bacteria 1600
217 Ga0373924_0055779 3300035410 Bacteria 1644
218 Ga0373933_0009268 3300035724 Bacteria 5374
219 Ga0373933_0009690 3300035724 Bacteria 5268
220 Ga0373937_0004735 3300036401 Bacteria 11574
221 Ga0373937_0011982 3300036401 Bacteria 7611
222 Ga0373937_0100409 3300036401 Bacteria 2686
223 Ga0372808_000053 3300036459 Bacteria 4959
224 Ga0373925_0000070 3300037068 Bacteria 107528
225 Ga0373925_0004413 3300037068 Bacteria 10627
226 Ga0436364_0151015 3300037853 Bacteria 1247
227 Ga0436364_0316861 3300037853 Bacteria 1496
228 Ga0436364_0453807 3300037853 Bacteria 3655
229 Ga0436364_1258086 3300037853 Bacteria 4313
230 Ga0436360_0905880 3300039438 Bacteria 884
231 Ga0436363_1431279 3300039450 Bacteria 1000
232 Ga0439441_006800 3300042001 Bacteria 1824
233 Ga0439434_0048782 3300042435 Bacteria 1310
234 Ga0466963_0124920 3300044694 Bacteria 1773
235 Ga0466971_0105185 3300044719 Bacteria 1300
236 Ga0466967_0075014 3300045976 Bacteria 3039
237 Ga0466967_0086309 3300045976 Bacteria 2843
238 Ga0495651_0000244 3300046462 Bacteria 42021
239 Ga0495651_0065332 3300046462 Bacteria 2778
240 Ga0495651_0214037 3300046462 Bacteria 1339
241 Ga0495653_0115019 3300046463 Bacteria 1926
242 Ga0495664_0011070 3300046477 Bacteria 5075
243 Ga0495608_0035205 3300046511 Bacteria 3378
244 Ga0495630_0100773 3300046517 Bacteria 2185
245 Ga0495652_0054793 3300046529 Bacteria 3394
246 Ga0495640_0039610 3300046533 Bacteria 3305
247 Ga0495586_0015603 3300046535 Bacteria 4042
248 Ga0495587_0048624 3300046536 Bacteria 2511
249 Ga0495667_0007718 3300046559 Bacteria 7292
250 Ga0495634_0019773 3300046642 Bacteria 4780
251 Ga0495635_0051740 3300046663 Bacteria 2829
252 Ga0495657_0078927 3300046675 Bacteria 2132
253 Ga0495657_0164400 3300046675 Bacteria 1371
254 Ga0495623_0107626 3300046679 Bacteria 1693
255 Ga0495646_0043365 3300046680 Bacteria 2755
256 Ga0495669_0021825 3300046684 Bacteria 2782
257 Ga0495600_0012564 3300046809 Bacteria 5298
258 Ga0495600_0044449 3300046809 Bacteria 2898
259 Ga0495604_0029373 3300047317 Bacteria 4373
260 Ga0495674_0138417 3300047319 Bacteria 2047
261 Ga0495675_0125483 3300047444 Bacteria 1597
262 Ga0495675_0144652 3300047444 Bacteria 1472
263 Ga0495602_0088900 3300048088 Bacteria 2570
264 Ga0496104_0073335 3300048907 Bacteria 3257
265 Ga0496112_0293665 3300048915 Bacteria 1571
266 Ga0496115_0059471 3300048918 Bacteria 3077
267 Ga0496116_0081558 3300048919 Bacteria 2005
268 Ga0496117_0030278 3300048920 Bacteria 4156
269 Ga0496119_0107282 3300048922 Bacteria 1557
270 Ga0496125_0048404 3300048928 Bacteria 3546
271 Ga0496126_0050825 3300048929 Bacteria 3776
272 Ga0496126_0231625 3300048929 Bacteria 1547
273 Ga0501299_026002 3300049522 Bacteria 1103
274 Ga0501036_0024951 3300049572 Bacteria 5042
275 Ga0501040_0055800 3300049576 Bacteria 2710
276 Ga0501041_0016216 3300049577 Bacteria 4428
277 Ga0501041_0049687 3300049577 Bacteria 2555
278 Ga0501073_0007227 3300049589 Bacteria 8267
279 Ga0501080_0420417 3300049742 Bacteria 1201
280 Ga0501045_0040577 3300049824 Bacteria 3386
281 nmdc:mga05p37_18596_c1 3300050507 Bacteria 8399
282 nmdc:mga05p37_400545_c1 3300050507 Bacteria 1602
283 nmdc:mga05p37_579555_c1 3300050507 Bacteria 1271
284 nmdc:mga05p37_598930_c1 3300050507 Bacteria 1244
285 nmdc:mga09592_10428_c1 3300050508 Bacteria 7562
286 nmdc:mga09592_208437_c1 3300050508 Bacteria 1693
287 nmdc:mga09592_2967_c1 3300050508 Bacteria 13752
288 nmdc:mga0qj67_157262_c1 3300050509 Bacteria 1845
289 nmdc:mga0qj67_16817_c1 3300050509 Bacteria 5554
290 nmdc:mga0qj67_31344_c1 3300050509 Bacteria 4141
291 nmdc:mga0qj67_605_c1 3300050509 Bacteria 24545
292 nmdc:mga06r32_244262_c1 3300050510 Bacteria 1783
293 nmdc:mga06r32_70128_c1 3300050510 Bacteria 3389
294 nmdc:mga06r32_90623_c1 3300050510 Bacteria 2987
295 nmdc:mga08y16_144823_c1 3300050511 Bacteria 2470
296 nmdc:mga08y16_20081_c1 3300050511 Bacteria 7049
297 nmdc:mga08y16_251123_c1 3300050511 Bacteria 1828
298 nmdc:mga0n895_4017_c1 3300050512 Bacteria 11970
299 Ga0495612_0017351 3300053078 Bacteria 2883
300 Ga0495619_0223719 3300053085 Bacteria 1304
301 Ga0495619_0237037 3300053085 Bacteria 1264
302 Ga0500641_0081067 3300053096 Bacteria 1377
303 Ga0500616_0000016 3300053153 Bacteria 627087
304 Ga0500616_0000232 3300053153 Bacteria 87382
305 Ga0500616_0008049 3300053153 Bacteria 6600
306 2511174246 2510917026 Bacteria 7046020
307 2558913246 2558860112 Bacteria 9931328
308 2585998216 2585427633 Bacteria 6413184
309 2586002792 2585427634 Bacteria 6455027
310 2599602232 2599185210 Bacteria 5624189
311 2601608361 2600255279 Bacteria 5605316
312 2601745135 2600255308 Bacteria 5611129
313 2643810996 2643221558 Bacteria 5460675
314 2657684203 2657244999 Bacteria 5946535
315 2738946658 2738541317 Bacteria 5340176
316 2792580936 2791355082 Bacteria 5973319
317 2804754165 2802429268 Bacteria 6094027
318 2840881779 2840878972 Bacteria 5483153
319 2854901045 2854896431 Bacteria 5869725
320 2854918056 2854916844 Bacteria 5725939
321 2891049820 2891048133 Bacteria 4447501
322 2913311984 2913308742 Bacteria 5350706
323 2919172701 2919171160 Bacteria 6499771
324 2933595447 2933594066 Bacteria 5594265
325 2995397129 2995392953 Bacteria 4539380
326 3000406134 3000405567 Bacteria 3779330
327 8005293070 8005289223 Bacteria 6634003
328 8049297266 8049293176 Bacteria 6128433
329 8054465362 8054460903 Bacteria 4872905
330 Ga0070679_100175329
331 Ga0070658_10014103
332 Ga0070683_100027522
333 Ga0070683_100112881
334 Ga0070683_100645167
335 Ga0070677_10038174
336 Ga0068869_100388162
337 Ga0070680_100003583
338 Ga0070680_100026171
339 Ga0070680_100046728
340 Ga0070680_100087379
341 Ga0070680_100267269
342 Ga0070680_100392893
343 Ga0070680_100426397
344 Ga0070680_100474256
345 Ga0070682_100397881
346 Ga0070691_10177278
347 Ga0070661_100028588
348 Ga0070661_100166020
349 Ga0070659_100233578
350 Ga0070709_10048122
351 Ga0070709_10119023
352 Ga0070714_100005870
353 Ga0070714_100032650
354 Ga0070714_100096429
355 Ga0070714_100173333
356 Ga0070713_100232703
357 Ga0070713_100238927
358 Ga0070713_100405115
359 Ga0070710_10016874
360 Ga0070710_10192303
361 Ga0070711_100197982
362 Ga0070700_100018948
363 Ga0070694_100118445
364 Ga0070708_100624755
365 Ga0070663_100022859
366 Ga0070681_10042578
367 Ga0070681_10068003
368 Ga0070681_10093835
369 Ga0070681_10113383
370 Ga0070681_10548555
371 Ga0068867_100003966
372 Ga0070706_100008459
373 Ga0070706_100083699
374 Ga0070706_100249101
375 Ga0070707_100042119
376 Ga0070698_100004792
377 Ga0070698_100256150
378 Ga0070698_100540037
379 Ga0070679_100026289
380 Ga0070679_100058713
381 Ga0070679_100068559
382 Ga0070679_100078234
383 Ga0070684_100017819
384 Ga0070684_100166060
385 Ga0070686_100246289
386 Ga0070696_100438387
387 Ga0070704_100452516
388 Ga0068855_100001319
389 Ga0068855_100008729
390 Ga0068855_100017812
391 Ga0068857_100311385
392 Ga0068854_100192727
393 Ga0068856_100421507
394 Ga0068864_100002594
395 Ga0068864_100083357
396 Ga0068861_100016975
397 Ga0068862_100003589
398 Ga0068862_100324103
399 Ga0081538_10003314
400 Ga0070715_10051210
401 Ga0070712_100412345
402 Ga0075428_100005577
403 Ga0075428_100111457
404 Ga0075428_100305741
405 Ga0075430_100048493
406 Ga0075431_100065442
407 Ga0075431_100069518
408 Ga0075431_100290101
409 Ga0075434_100017732
410 Ga0075429_100003530
411 Ga0075429_100047811
412 Ga0075429_100080943
413 Ga0068865_100103816
414 Ga0099826_10000079
415 Ga0105240_10003623
416 Ga0105240_10034991
417 Ga0111539_10226761
418 Ga0111539_10259353
419 Ga0111539_10537811
420 Ga0114129_10019707
421 Ga0114129_10075482
422 Ga0114129_10194329
423 Ga0105243_10287414
424 Ga0105238_10005253
425 Ga0105249_10036440
426 Ga0105035_100530
427 Ga0105239_10218607
428 Ga0105239_10387279
429 Ga0157370_10014407
430 Ga0157370_10016900
431 Ga0157370_10268648
432 Ga0157369_10014032
433 Ga0157369_10032297
434 Ga0157369_10064962
435 Ga0157372_10201961
436 Ga0157515_127289
437 Ga0157380_10002041
438 Ga0157377_10148127
439 Ga0163161_10225167
440 Ga0163161_10466159
441 Ga0197907_11352878
442 Ga0206356_11149137
443 Ga0206349_1915311
444 Ga0206352_10474100
445 Ga0224712_10002018
446 Ga0224712_10150510
447 Ga0224712_10179786
448 Ga0209025_1002310
449 Ga0209758_1000291
450 Ga0209758_1030577
451 Ga0209050_1005856
452 Ga0209051_1019263
453 Ga0209257_1004230
454 Ga0207692_10061885
455 Ga0207647_10050530
456 Ga0207685_10008210
457 Ga0207699_10026352
458 Ga0207643_10019276
459 Ga0207705_10050048
460 Ga0207705_10298132
461 Ga0207684_10051743
462 Ga0207684_10156341
463 Ga0207707_10000755
464 Ga0207707_10021313
465 Ga0207707_10081623
466 Ga0207695_10159273
467 Ga0207693_10014196
468 Ga0207660_10017321
469 Ga0207660_10054822
470 Ga0207660_10139181
471 Ga0207660_10141652
472 Ga0207652_10001345
473 Ga0207652_10016042
474 Ga0207652_10029709
475 Ga0207646_10070741
476 Ga0207646_10103702
477 Ga0207681_10007107
478 Ga0207694_10275648
479 Ga0207700_10020595
480 Ga0207700_10258841
481 Ga0207664_10004591
482 Ga0207664_10020595
483 Ga0207664_10038743
484 Ga0207664_10100963
485 Ga0207690_10100036
486 Ga0207704_10025867
487 Ga0207665_10005557
488 Ga0207665_10083490
489 Ga0207661_10001024
490 Ga0207661_10189484
491 Ga0207679_10333003
492 Ga0207667_10013433
493 Ga0207712_10011044
494 Ga0207648_10002815
495 Ga0207674_10072855
496 Ga0207675_100915798
497 Ga0207683_10312294
498 Ga0209969_1006106
499 Ga0209981_1002486
500 Ga0209999_1001483
501 Ga0209999_1006262
502 Ga0209282_1000162
503 Ga0209966_1008662
504 Ga0209974_10009467
505 Ga0207428_10060939
506 Ga0268265_10006428
507 Ga0268264_10452825
508 Ga0265337_1000173
509 Ga0265337_1000495
510 Ga0265326_10001937
511 Ga0265319_1005974
512 Ga0265334_10000107
513 Ga0265322_10004520
514 Ga0265336_10001729
515 Ga0307515_10000556
516 Ga0265338_10000757
517 Ga0265338_10152612
518 Ga0265324_10003751
519 Ga0265332_10015021
520 Ga0265320_10000103
521 Ga0265320_10005274
522 Ga0307513_10013705
523 Ga0307408_100191257
524 Ga0265313_10003493
525 Ga0265313_10029668
526 Ga0307508_10248326
527 Ga0265314_10026290
528 Ga0265314_10036149
529 Ga0265342_10004422
530 Ga0307413_10037406
531 Ga0307406_10078156
532 Ga0307407_10037022
533 Ga0307409_100000532
534 Ga0307416_100002579
535 Ga0307416_100086331
536 Ga0307415_100000144
537 Ga0373929_0005319
538 Ga0373934_0011290
539 Ga0373953_0038327
540 Ga0373954_0000075
541 Ga0373954_0027691
542 Ga0373956_0032177
543 Ga0373957_0008613
544 Ga0373955_0031571
545 Ga0316574_0133113
546 Ga0373924_0055779
547 Ga0373933_0009268
548 Ga0373933_0009690
549 Ga0373937_0004735
550 Ga0373937_0011982
551 Ga0373937_0100409
552 Ga0372808_000053
553 Ga0373925_0000070
554 Ga0373925_0004413
555 Ga0436364_0151015
556 Ga0436364_0316861
557 Ga0436364_0453807
558 Ga0436364_1258086
559 Ga0436360_0905880
560 Ga0436363_1431279
561 Ga0439441_006800
562 Ga0439434_0048782
563 Ga0466963_0124920
564 Ga0466971_0105185
565 Ga0466967_0075014
566 Ga0466967_0086309
567 Ga0495651_0000244
568 Ga0495651_0065332
569 Ga0495651_0214037
570 Ga0495653_0115019
571 Ga0495664_0011070
572 Ga0495608_0035205
573 Ga0495630_0100773
574 Ga0495652_0054793
575 Ga0495640_0039610
576 Ga0495586_0015603
577 Ga0495587_0048624
578 Ga0495667_0007718
579 Ga0495634_0019773
580 Ga0495635_0051740
581 Ga0495657_0078927
582 Ga0495657_0164400
583 Ga0495623_0107626
584 Ga0495646_0043365
585 Ga0495669_0021825
586 Ga0495600_0012564
587 Ga0495600_0044449
588 Ga0495604_0029373
589 Ga0495674_0138417
590 Ga0495675_0125483
591 Ga0495675_0144652
592 Ga0495602_0088900
593 Ga0496104_0073335
594 Ga0496112_0293665
595 Ga0496115_0059471
596 Ga0496116_0081558
597 Ga0496117_0030278
598 Ga0496119_0107282
599 Ga0496125_0048404
600 Ga0496126_0050825
601 Ga0496126_0231625
602 Ga0501299_026002
603 Ga0501036_0024951
604 Ga0501040_0055800
605 Ga0501041_0016216
606 Ga0501041_0049687
607 Ga0501073_0007227
608 Ga0501080_0420417
609 Ga0501045_0040577
610 nmdc:mga05p37_18596_c1
611 nmdc:mga05p37_400545_c1
612 nmdc:mga05p37_579555_c1
613 nmdc:mga05p37_598930_c1
614 nmdc:mga09592_10428_c1
615 nmdc:mga09592_208437_c1
616 nmdc:mga09592_2967_c1
617 nmdc:mga0qj67_157262_c1
618 nmdc:mga0qj67_16817_c1
619 nmdc:mga0qj67_31344_c1
620 nmdc:mga0qj67_605_c1
621 nmdc:mga06r32_244262_c1
622 nmdc:mga06r32_70128_c1
623 nmdc:mga06r32_90623_c1
624 nmdc:mga08y16_144823_c1
625 nmdc:mga08y16_20081_c1
626 nmdc:mga08y16_251123_c1
627 nmdc:mga0n895_4017_c1
628 Ga0495612_0017351
629 Ga0495619_0223719
630 Ga0495619_0237037
631 Ga0500641_0081067
632 Ga0500616_0000016
633 Ga0500616_0000232
634 Ga0500616_0008049
635 2511174246
636 2558913246
637 2585998216
638 2586002792
639 2599602232
640 2601608361
641 2601745135
642 2643810996
643 2657684203
644 2738946658
645 2792580936
646 2804754165
647 2840881779
648 2854901045
649 2854918056
650 2891049820
651 2913311984
652 2919172701
653 2933595447
654 2995397129
655 3000406134
656 8005293070
657 8049297266
658 8054465362

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04909

Amidohydro_2

Amidohydrolase

21

292

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3irs-assembly1.cif.gz_B crystal structure of uncharacterized tim-barrel protein bb4693 from bordetella bronchiseptica 0.7593 14 280
3nur-assembly1.cif.gz_A crystal structure of a putative amidohydrolase from staphylococcus aureus 0.7342 16 280
4ifo-assembly1.cif.gz_A 2.50 angstroms x-ray crystal structure of r51a 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase from pseudomonas fluorescens 0.7231 16 281
3s4t-assembly1.cif.gz_A crystal structure of putative amidohydrolase-2 (efi-target 500288)from polaromonas sp. js666 0.7101 14 280
4ofc-assembly1.cif.gz_A 2.0 angstroms x-ray crystal structure of human 2-amino-3-carboxymuconate-6-semialdehye decarboxylase 0.7065 17 281
ID Description Score Start End Superfamily
af_Q50662_37_305_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8064 31 280 3.20.20.140
af_I6Y3Q7_2_272_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.7979 17 281 3.20.20.140
af_I6Y3Q7_2_272_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.7787 17 281 3.20.20.140
af_Q50662_37_305_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.7511 31 280 3.20.20.140
3k4wC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.7485 17 280 3.20.20.140
ID Description Score Start End GO Terms
AF-T0YZA4-F1-model_v4 Amidohydrolase 2 0.9946 87 258 GO:0016787
GO:0016831
AF-W0ZBU5-F1-model_v4 Amidohydrolase 0.993 87 281 GO:0016787
GO:0016831
AF-A0A1F4LV06-F1-model_v4 4-hydroxyphenyl-beta-ketoacyl-CoA hydrolase 0.9904 78 281 GO:0016787
GO:0016831
AF-A0A4V2AFV4-F1-model_v4 deleted 0.9902 129 281
AF-A0A6B2WBE0-F1-model_v4 Amidohydrolase 0.9863 68 226 GO:0016787
GO:0016831

Map