F406366

General Info

Members Datasets Scaffolds Average Seq Length
322 209 644 156

Family's Representative Sequence

Representative Sequence 3300005617|Ga0068859_100000119|Ga0068859_10000011935
Length 167
Sequence VKLDSMYQEIILDHYRNPHHRGLREPFDAEVHHVNPTCGDEVTMRVKIVDDTVADVSYEGEGCSISQASASVMSDLVIGRSVADALDLEREFLALMQSRGTVEPDEDVLEDAVAFAGVSKYPARVKCALLSWMAWKDATAQVVGGSAAAVASVPSETGSVPEQEKKA

Samples

Sample ID Description Type Environment
1 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
2 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003163 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300003544 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
6 3300003574 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
7 3300003577 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
8 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
9 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
10 3300003735 Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_23 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
11 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
48 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
49 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
52 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
53 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
54 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300019162 Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU3 metaT (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300019182 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE1 metaT (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
81 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
82 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
83 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
84 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
85 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
86 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
87 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
88 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
89 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
90 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
92 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
123 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
126 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
127 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
128 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
129 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
130 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
131 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
132 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
133 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
134 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
135 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
136 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
137 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
138 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
139 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
140 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
141 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
142 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
143 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
144 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
145 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
146 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
147 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
148 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
149 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
150 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
151 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
152 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
153 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
154 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
155 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
156 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
157 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
158 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
159 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
160 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
161 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
162 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
163 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
164 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
165 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
166 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
167 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
168 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
169 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
170 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
171 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
172 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
173 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
174 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
175 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
176 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
177 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
178 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
179 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
180 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
181 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
182 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
183 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
184 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
185 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
186 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
187 3300049773 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_B_4_control Metagenome Rhizosphere
188 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
189 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
190 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
191 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
192 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
193 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
194 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
195 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
196 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
197 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
198 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
199 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
200 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
201 2506783011 Frankia datiscae Dg1 Isolate Nodule
202 2508501039 Frankia saprophytica CN3 Isolate Nodule
203 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
204 2687453737 Frankia sp. BMG5.36 Isolate Nodule
205 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
206 2773857933 Frankia sp. BMG5.30 Isolate Nodule
207 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
208 8002775197 Frankia nepalensis CN7 Isolate Nodule
209 8002784119 Frankia sp. AgB1.9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.92
Metatranscriptomes 14.29
Isolates 2.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.11
Nodule 2.48
Rhizoplane 5.28
Rhizosphere 84.78
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068859_100000119 3300005617 Bacteria 74778
2 Ga0006778J45830_1020746 3300003162 Bacteria 740
3 Ga0006759J45824_1025934 3300003163 Bacteria 864
4 Ga0006759J45824_1027069 3300003163 Bacteria 852
5 JGI25407J50210_10000276 3300003373 Bacteria 9173
6 Ga0007417J51691_1023923 3300003544 Bacteria 785
7 Ga0007410J51695_1018233 3300003574 Bacteria 973
8 Ga0007416J51690_1029019 3300003577 Bacteria 901
9 Ga0007429J51699_1013909 3300003579 Bacteria 1005
10 Ga0007429J51699_1021520 3300003579 Bacteria 1134
11 Ga0032354_1007381 3300003693 Bacteria 928
12 Ga0032354_1023416 3300003693 Bacteria 1067
13 Ga0006780_1034549 3300003735 Bacteria 538
14 JGI25405J52794_10011082 3300003911 Bacteria 1722
15 Ga0070658_10000119 3300005327 Bacteria 71128
16 Ga0070683_100062986 3300005329 Bacteria 3449
17 Ga0070666_10560311 3300005335 Bacteria 832
18 Ga0070680_101141433 3300005336 Bacteria 674
19 Ga0070660_100109286 3300005339 Bacteria 2198
20 Ga0070660_100603699 3300005339 Bacteria 918
21 Ga0070660_101284876 3300005339 Bacteria 621
22 Ga0070674_100605089 3300005356 Bacteria 926
23 Ga0070659_100000362 3300005366 Bacteria 34592
24 Ga0070709_10003980 3300005434 Bacteria 7973
25 Ga0070709_10233997 3300005434 Bacteria 1316
26 Ga0070714_100109369 3300005435 Bacteria 2445
27 Ga0070714_100454022 3300005435 Bacteria 1218
28 Ga0070714_100716574 3300005435 Bacteria 966
29 Ga0070713_100131784 3300005436 Bacteria 2205
30 Ga0070710_10068711 3300005437 Bacteria 2036
31 Ga0070711_100506000 3300005439 Bacteria 996
32 Ga0070705_100623511 3300005440 Bacteria 837
33 Ga0070708_100000926 3300005445 Bacteria 22202
34 Ga0070708_100234618 3300005445 Bacteria 1722
35 Ga0070708_100242864 3300005445 Bacteria 1691
36 Ga0070663_101241563 3300005455 Bacteria 656
37 Ga0070681_11457512 3300005458 Bacteria 609
38 Ga0070706_100007887 3300005467 Bacteria 9946
39 Ga0070706_100101142 3300005467 Bacteria 2679
40 Ga0070706_100120370 3300005467 Bacteria 2447
41 Ga0070706_100288500 3300005467 Bacteria 1531
42 Ga0070707_100011697 3300005468 Bacteria 8189
43 Ga0070707_100052507 3300005468 Bacteria 3908
44 Ga0070707_100098447 3300005468 Bacteria 2833
45 Ga0070707_100125478 3300005468 Bacteria 2493
46 Ga0070707_100183043 3300005468 Bacteria 2043
47 Ga0070707_100515303 3300005468 Bacteria 1158
48 Ga0070698_100015007 3300005471 Bacteria 8189
49 Ga0070699_100076227 3300005518 Bacteria 2919
50 Ga0070679_100074413 3300005530 Bacteria 3387
51 Ga0070679_100218216 3300005530 Bacteria 1869
52 Ga0070679_100232938 3300005530 Bacteria 1801
53 Ga0070684_100040664 3300005535 Bacteria 4005
54 Ga0070684_100072361 3300005535 Bacteria 3035
55 Ga0070684_101228121 3300005535 Bacteria 705
56 Ga0070697_100325485 3300005536 Bacteria 1324
57 Ga0070696_100685216 3300005546 Bacteria 834
58 Ga0068855_100005562 3300005563 Bacteria 15377
59 Ga0068855_100315166 3300005563 Bacteria 1730
60 Ga0068855_100690269 3300005563 Bacteria 1093
61 Ga0070664_100922888 3300005564 Bacteria 819
62 Ga0068856_100014594 3300005614 Bacteria 7590
63 Ga0068852_100395801 3300005616 Bacteria 1358
64 Ga0068859_100006833 3300005617 Bacteria 11593
65 Ga0068863_100006314 3300005841 Bacteria 11634
66 Ga0068858_100000082 3300005842 Bacteria 99205
67 Ga0068858_100014523 3300005842 Bacteria 7419
68 Ga0068860_100103862 3300005843 Bacteria 2713
69 Ga0068862_100000166 3300005844 Bacteria 72987
70 Ga0081455_10000462 3300005937 Bacteria 53037
71 Ga0081538_10000092 3300005981 Bacteria 87123
72 Ga0070717_10008444 3300006028 Bacteria 7693
73 Ga0070717_10208913 3300006028 Bacteria 1712
74 Ga0070717_10276031 3300006028 Bacteria 1490
75 Ga0075365_10056358 3300006038 Bacteria 2612
76 Ga0075363_100071842 3300006048 Bacteria 1881
77 Ga0070715_10030441 3300006163 Bacteria 2182
78 Ga0070716_100009973 3300006173 Bacteria 4751
79 Ga0070716_100168917 3300006173 Bacteria 1425
80 Ga0070712_100331225 3300006175 Bacteria 1240
81 Ga0070712_101005300 3300006175 Bacteria 722
82 Ga0075362_10096555 3300006177 Bacteria 1377
83 Ga0075367_10017765 3300006178 Bacteria 3911
84 Ga0075366_10450758 3300006195 Bacteria 794
85 Ga0075428_101250946 3300006844 Bacteria 781
86 Ga0075430_100006830 3300006846 Bacteria 9618
87 Ga0075431_100011097 3300006847 Bacteria 9066
88 Ga0075429_100000765 3300006880 Bacteria 25332
89 Ga0097620_100000119 3300006931 Bacteria 74778
90 Ga0097620_100006833 3300006931 Bacteria 11593
91 Ga0099795_10284153 3300007788 Bacteria 723
92 Ga0105240_10007788 3300009093 Bacteria 15484
93 Ga0105240_10278471 3300009093 Bacteria 1923
94 Ga0111539_10946041 3300009094 Bacteria 1002
95 Ga0111539_11921334 3300009094 Bacteria 686
96 Ga0105247_10000049 3300009101 Bacteria 150328
97 Ga0105247_10021935 3300009101 Bacteria 3843
98 Ga0105247_10409776 3300009101 Bacteria 968
99 Ga0114129_10017688 3300009147 Bacteria 10148
100 Ga0105242_10087676 3300009176 Bacteria 2613
101 Ga0105248_10000473 3300009177 Bacteria 45835
102 Ga0105248_10163641 3300009177 Bacteria 2509
103 Ga0105248_10242913 3300009177 Bacteria 2027
104 Ga0105249_10102758 3300009553 Bacteria 2691
105 Ga0105249_11977745 3300009553 Bacteria 656
106 Ga0105028_110378 3300009993 Bacteria 978
107 Ga0105246_10569992 3300011119 Bacteria 973
108 Ga0157373_10047742 3300013100 Bacteria 3053
109 Ga0157373_10446125 3300013100 Bacteria 931
110 Ga0157370_10001191 3300013104 Bacteria 32401
111 Ga0157370_10510486 3300013104 Bacteria 1104
112 Ga0157370_10840277 3300013104 Bacteria 835
113 Ga0157369_10000797 3300013105 Bacteria 40264
114 Ga0157369_10010485 3300013105 Bacteria 10552
115 Ga0157369_10026198 3300013105 Bacteria 6470
116 Ga0157369_10437926 3300013105 Bacteria 1354
117 Ga0157374_11172848 3300013296 Bacteria 789
118 Ga0157374_12187580 3300013296 Bacteria 580
119 Ga0157378_10590919 3300013297 Bacteria 1120
120 Ga0157378_10854423 3300013297 Bacteria 938
121 Ga0157378_11738159 3300013297 Bacteria 671
122 Ga0157372_10045581 3300013307 Bacteria 4865
123 Ga0157372_11780041 3300013307 Bacteria 708
124 Ga0163163_10006285 3300014325 Bacteria 10371
125 Ga0163163_11463178 3300014325 Bacteria 745
126 Ga0157380_11428530 3300014326 Bacteria 743
127 Ga0157379_10000266 3300014968 Bacteria 41149
128 Ga0157379_10037461 3300014968 Bacteria 4325
129 Ga0157379_10053574 3300014968 Bacteria 3604
130 Ga0184597_124372 3300019162 Bacteria 1240
131 Ga0184598_123972 3300019182 Bacteria 697
132 Ga0197907_10028654 3300020069 Bacteria 6070
133 Ga0197907_10255730 3300020069 Bacteria 1417
134 Ga0197907_11006550 3300020069 Bacteria 1479
135 Ga0197907_11478162 3300020069 Bacteria 1074
136 Ga0206356_11780625 3300020070 Bacteria 1774
137 Ga0206349_1121072 3300020075 Bacteria 1521
138 Ga0206349_1406113 3300020075 Bacteria 990
139 Ga0206349_1552130 3300020075 Bacteria 4490
140 Ga0206355_1174413 3300020076 Bacteria 1013
141 Ga0206355_1197395 3300020076 Bacteria 1534
142 Ga0206355_1266118 3300020076 Bacteria 615
143 Ga0206351_10080020 3300020077 Bacteria 3750
144 Ga0206351_10182655 3300020077 Bacteria 538
145 Ga0206351_10865376 3300020077 Bacteria 1089
146 Ga0206352_10533400 3300020078 Bacteria 1212
147 Ga0206350_10533127 3300020080 Bacteria 821
148 Ga0206350_10636019 3300020080 Bacteria 2208
149 Ga0206354_10058407 3300020081 Bacteria 1286
150 Ga0206354_11529431 3300020081 Bacteria 1017
151 Ga0206353_10700683 3300020082 Bacteria 1369
152 Ga0154015_1288217 3300020610 Bacteria 587
153 Ga0154015_1549952 3300020610 Bacteria 1488
154 Ga0154015_1636991 3300020610 Bacteria 730
155 Ga0154015_1693551 3300020610 Bacteria 1285
156 Ga0224712_10000563 3300022467 Bacteria 7524
157 Ga0224712_10034317 3300022467 Bacteria 1865
158 Ga0224712_10050263 3300022467 Bacteria 1619
159 Ga0224712_10136755 3300022467 Bacteria 1075
160 Ga0224712_10196309 3300022467 Bacteria 916
161 Ga0224712_10233768 3300022467 Bacteria 845
162 Ga0224712_10307323 3300022467 Bacteria 743
163 Ga0207656_10353507 3300025321 Bacteria 734
164 Ga0207692_10005963 3300025898 Bacteria 4921
165 Ga0207710_10000012 3300025900 Bacteria 409603
166 Ga0207710_10000073 3300025900 Bacteria 150308
167 Ga0207710_10124009 3300025900 Bacteria 1236
168 Ga0207680_10246163 3300025903 Bacteria 1234
169 Ga0207685_10024788 3300025905 Bacteria 2062
170 Ga0207699_10013307 3300025906 Bacteria 4208
171 Ga0207699_10121242 3300025906 Bacteria 1691
172 Ga0207705_10000750 3300025909 Bacteria 26716
173 Ga0207705_10046197 3300025909 Bacteria 3129
174 Ga0207705_10082581 3300025909 Bacteria 2344
175 Ga0207705_10222045 3300025909 Bacteria 1435
176 Ga0207705_10429009 3300025909 Bacteria 1024
177 Ga0207684_10005468 3300025910 Bacteria 11710
178 Ga0207684_10087077 3300025910 Bacteria 2661
179 Ga0207707_11154572 3300025912 Bacteria 629
180 Ga0207695_10187544 3300025913 Bacteria 1987
181 Ga0207695_10430457 3300025913 Bacteria 1203
182 Ga0207693_10138621 3300025915 Bacteria 1913
183 Ga0207693_10618720 3300025915 Bacteria 842
184 Ga0207657_10126552 3300025919 Bacteria 2098
185 Ga0207657_10137696 3300025919 Bacteria 1996
186 Ga0207657_10147929 3300025919 Bacteria 1915
187 Ga0207657_10632267 3300025919 Bacteria 834
188 Ga0207652_10228520 3300025921 Bacteria 1677
189 Ga0207652_10897857 3300025921 Bacteria 783
190 Ga0207646_10001464 3300025922 Bacteria 29215
191 Ga0207646_10015670 3300025922 Bacteria 7144
192 Ga0207646_10063745 3300025922 Bacteria 3290
193 Ga0207646_10130074 3300025922 Bacteria 2265
194 Ga0207646_10344939 3300025922 Bacteria 1346
195 Ga0207646_10527212 3300025922 Bacteria 1063
196 Ga0207646_11096304 3300025922 Bacteria 701
197 Ga0207687_10196506 3300025927 Bacteria 1573
198 Ga0207700_10070428 3300025928 Bacteria 2688
199 Ga0207664_10002454 3300025929 Bacteria 12273
200 Ga0207644_10809261 3300025931 Bacteria 784
201 Ga0207690_10003378 3300025932 Bacteria 9539
202 Ga0207690_10242827 3300025932 Bacteria 1388
203 Ga0207669_10206334 3300025937 Bacteria 1431
204 Ga0207665_10005129 3300025939 Bacteria 8746
205 Ga0207711_10000400 3300025941 Bacteria 45796
206 Ga0207711_10104513 3300025941 Bacteria 2510
207 Ga0207661_10034746 3300025944 Bacteria 3924
208 Ga0207661_10091699 3300025944 Bacteria 2532
209 Ga0207667_10055092 3300025949 Bacteria 4181
210 Ga0207667_10511548 3300025949 Bacteria 1217
211 Ga0207651_11170200 3300025960 Bacteria 690
212 Ga0207712_10090059 3300025961 Bacteria 2256
213 Ga0207703_10000029 3300026035 Bacteria 199952
214 Ga0207703_10045771 3300026035 Bacteria 3521
215 Ga0207678_10217117 3300026067 Bacteria 1636
216 Ga0207678_10434251 3300026067 Bacteria 1140
217 Ga0207702_10373937 3300026078 Bacteria 1369
218 Ga0207641_10008208 3300026088 Bacteria 8631
219 Ga0207428_10001011 3300027907 Bacteria 31194
220 Ga0268265_10000069 3300028380 Bacteria 141036
221 Ga0268264_10077005 3300028381 Bacteria 2839
222 Ga0265338_10133722 3300028800 Bacteria 1954
223 Ga0265325_10082018 3300031241 Bacteria 1601
224 Ga0265340_10014263 3300031247 Bacteria 4155
225 Ga0265340_10081157 3300031247 Bacteria 1527
226 Ga0265339_10061690 3300031249 Bacteria 2017
227 Ga0265316_10209905 3300031344 Bacteria 1441
228 Ga0307513_10085034 3300031456 Bacteria 3247
229 Ga0265313_10161803 3300031595 Bacteria 950
230 Ga0307413_11035427 3300031824 Bacteria 706
231 Ga0307410_10219591 3300031852 Bacteria 1462
232 Ga0307409_100040393 3300031995 Bacteria 3473
233 Ga0307415_100239679 3300032126 Bacteria 1466
234 Ga0373926_0000136 3300035083 Bacteria 15427
235 Ga0373923_0145673 3300035111 Bacteria 1073
236 Ga0373945_0266317 3300035116 Bacteria 727
237 Ga0373943_0197815 3300035170 Bacteria 1111
238 Ga0373946_0008865 3300035171 Bacteria 3694
239 Ga0373946_0503693 3300035171 Bacteria 621
240 Ga0373935_0002281 3300035692 Bacteria 10918
241 Ga0373935_0105585 3300035692 Bacteria 1863
242 Ga0373947_0000001 3300035725 Bacteria 510932
243 Ga0373925_0253706 3300037068 Bacteria 1411
244 Ga0395898_0088536 3300037466 Bacteria 2980
245 Ga0395901_0079099 3300038443 Bacteria 3433
246 Ga0439448_0119284 3300042005 Bacteria 905
247 Ga0466970_0023210 3300044765 Bacteria 3239
248 Ga0466957_0653936 3300044842 Bacteria 739
249 Ga0466967_0018767 3300045976 Bacteria 5539
250 Ga0466967_0642607 3300045976 Bacteria 1049
251 Ga0495592_0590680 3300046454 Bacteria 678
252 Ga0495629_0518310 3300046459 Bacteria 803
253 Ga0495653_0133688 3300046463 Bacteria 1752
254 Ga0495653_0504126 3300046463 Bacteria 754
255 Ga0495580_0721014 3300046472 Bacteria 651
256 Ga0495662_0308298 3300046476 Bacteria 778
257 Ga0495664_0022153 3300046477 Bacteria 3679
258 Ga0495630_0122981 3300046517 Bacteria 1969
259 Ga0495665_0290570 3300046531 Bacteria 838
260 Ga0495640_0064579 3300046533 Bacteria 2474
261 Ga0495667_0449986 3300046559 Bacteria 809
262 Ga0495624_0043615 3300046690 Bacteria 2861
263 Ga0495674_0009301 3300047319 Bacteria 9339
264 Ga0495676_0161146 3300047321 Bacteria 1587
265 Ga0495680_0199521 3300047322 Bacteria 1436
266 Ga0496100_0365163 3300048903 Bacteria 1093
267 Ga0496101_0382554 3300048904 Bacteria 1107
268 Ga0496102_0032901 3300048905 Bacteria 4660
269 Ga0496103_0186889 3300048906 Bacteria 1332
270 Ga0496104_0002733 3300048907 Bacteria 15181
271 Ga0496105_0004232 3300048908 Bacteria 10785
272 Ga0496106_0096936 3300048909 Bacteria 2283
273 Ga0496107_0165000 3300048910 Bacteria 1642
274 Ga0496107_0411743 3300048910 Bacteria 1005
275 Ga0496108_0013113 3300048911 Bacteria 6756
276 Ga0496109_0014260 3300048912 Bacteria 6915
277 Ga0496110_0255682 3300048913 Bacteria 1594
278 Ga0496112_0008067 3300048915 Bacteria 9399
279 Ga0496112_1093069 3300048915 Bacteria 716
280 Ga0496113_0135126 3300048916 Bacteria 1937
281 Ga0496113_0460777 3300048916 Bacteria 1021
282 Ga0496115_0004521 3300048918 Bacteria 10059
283 Ga0496116_0000292 3300048919 Bacteria 85239
284 Ga0496117_0011621 3300048920 Bacteria 7869
285 Ga0496117_0058306 3300048920 Bacteria 2675
286 Ga0496118_0001671 3300048921 Bacteria 32518
287 Ga0496118_0004040 3300048921 Bacteria 17827
288 Ga0496119_0000556 3300048922 Bacteria 50537
289 Ga0496119_0002934 3300048922 Bacteria 18152
290 Ga0496119_0066146 3300048922 Bacteria 2137
291 Ga0496120_0000120 3300048923 Bacteria 131625
292 Ga0496121_0005120 3300048924 Bacteria 17077
293 Ga0496121_0014650 3300048924 Bacteria 8291
294 Ga0496121_0344350 3300048924 Bacteria 995
295 Ga0501042_0053606 3300049578 Bacteria 2877
296 Ga0501069_0136966 3300049585 Bacteria 1403
297 Ga0501070_0013037 3300049586 Bacteria 7006
298 Ga0501276_017952 3300049773 Bacteria 655
299 nmdc:mga00v17_331561_c1 3300050491 Bacteria 989
300 nmdc:mga00v17_78765_c1 3300050491 Bacteria 2054
301 nmdc:mga0yw44_267564_c1 3300050492 Bacteria 1140
302 nmdc:mga07m45_2436_c1 3300050496 Bacteria 8727
303 nmdc:mga05p37_162_c1 3300050507 Bacteria 64436
304 nmdc:mga09592_1580_c1 3300050508 Bacteria 18334
305 nmdc:mga0qj67_4993_c1 3300050509 Bacteria 9643
306 nmdc:mga06r32_106_c1 3300050510 Bacteria 58645
307 nmdc:mga08y16_49138_c1 3300050511 Bacteria 4415
308 nmdc:mga0n895_325843_c1 3300050512 Bacteria 1556
309 Ga0495601_0039180 3300053077 Bacteria 2967
310 Ga0495612_0102567 3300053078 Bacteria 1219
311 Ga0500583_0032893 3300053092 Bacteria 2291
312 Ga0587082_022541 3300059504 Bacteria 1037
313 Ga0587082_098189 3300059504 Bacteria 635
314 2506866273 2506783011 Bacteria 5323186
315 2508677672 2508501039 Bacteria 9978592
316 2676199630 2675902999 Bacteria 9438463
317 2689956457 2687453737 Bacteria 11203906
318 2774844208 2773857921 Bacteria 9435764
319 2774902367 2773857933 Bacteria 5818019
320 2891329979 2891326441 Bacteria 6439512
321 8002777889 8002775197 Bacteria 10728764
322 8002790728 8002784119 Bacteria 9788632
323 Ga0068859_100000119
324 Ga0006778J45830_1020746
325 Ga0006759J45824_1025934
326 Ga0006759J45824_1027069
327 JGI25407J50210_10000276
328 Ga0007417J51691_1023923
329 Ga0007410J51695_1018233
330 Ga0007416J51690_1029019
331 Ga0007429J51699_1013909
332 Ga0007429J51699_1021520
333 Ga0032354_1007381
334 Ga0032354_1023416
335 Ga0006780_1034549
336 JGI25405J52794_10011082
337 Ga0070658_10000119
338 Ga0070683_100062986
339 Ga0070666_10560311
340 Ga0070680_101141433
341 Ga0070660_100109286
342 Ga0070660_100603699
343 Ga0070660_101284876
344 Ga0070674_100605089
345 Ga0070659_100000362
346 Ga0070709_10003980
347 Ga0070709_10233997
348 Ga0070714_100109369
349 Ga0070714_100454022
350 Ga0070714_100716574
351 Ga0070713_100131784
352 Ga0070710_10068711
353 Ga0070711_100506000
354 Ga0070705_100623511
355 Ga0070708_100000926
356 Ga0070708_100234618
357 Ga0070708_100242864
358 Ga0070663_101241563
359 Ga0070681_11457512
360 Ga0070706_100007887
361 Ga0070706_100101142
362 Ga0070706_100120370
363 Ga0070706_100288500
364 Ga0070707_100011697
365 Ga0070707_100052507
366 Ga0070707_100098447
367 Ga0070707_100125478
368 Ga0070707_100183043
369 Ga0070707_100515303
370 Ga0070698_100015007
371 Ga0070699_100076227
372 Ga0070679_100074413
373 Ga0070679_100218216
374 Ga0070679_100232938
375 Ga0070684_100040664
376 Ga0070684_100072361
377 Ga0070684_101228121
378 Ga0070697_100325485
379 Ga0070696_100685216
380 Ga0068855_100005562
381 Ga0068855_100315166
382 Ga0068855_100690269
383 Ga0070664_100922888
384 Ga0068856_100014594
385 Ga0068852_100395801
386 Ga0068859_100006833
387 Ga0068863_100006314
388 Ga0068858_100000082
389 Ga0068858_100014523
390 Ga0068860_100103862
391 Ga0068862_100000166
392 Ga0081455_10000462
393 Ga0081538_10000092
394 Ga0070717_10008444
395 Ga0070717_10208913
396 Ga0070717_10276031
397 Ga0075365_10056358
398 Ga0075363_100071842
399 Ga0070715_10030441
400 Ga0070716_100009973
401 Ga0070716_100168917
402 Ga0070712_100331225
403 Ga0070712_101005300
404 Ga0075362_10096555
405 Ga0075367_10017765
406 Ga0075366_10450758
407 Ga0075428_101250946
408 Ga0075430_100006830
409 Ga0075431_100011097
410 Ga0075429_100000765
411 Ga0097620_100000119
412 Ga0097620_100006833
413 Ga0099795_10284153
414 Ga0105240_10007788
415 Ga0105240_10278471
416 Ga0111539_10946041
417 Ga0111539_11921334
418 Ga0105247_10000049
419 Ga0105247_10021935
420 Ga0105247_10409776
421 Ga0114129_10017688
422 Ga0105242_10087676
423 Ga0105248_10000473
424 Ga0105248_10163641
425 Ga0105248_10242913
426 Ga0105249_10102758
427 Ga0105249_11977745
428 Ga0105028_110378
429 Ga0105246_10569992
430 Ga0157373_10047742
431 Ga0157373_10446125
432 Ga0157370_10001191
433 Ga0157370_10510486
434 Ga0157370_10840277
435 Ga0157369_10000797
436 Ga0157369_10010485
437 Ga0157369_10026198
438 Ga0157369_10437926
439 Ga0157374_11172848
440 Ga0157374_12187580
441 Ga0157378_10590919
442 Ga0157378_10854423
443 Ga0157378_11738159
444 Ga0157372_10045581
445 Ga0157372_11780041
446 Ga0163163_10006285
447 Ga0163163_11463178
448 Ga0157380_11428530
449 Ga0157379_10000266
450 Ga0157379_10037461
451 Ga0157379_10053574
452 Ga0184597_124372
453 Ga0184598_123972
454 Ga0197907_10028654
455 Ga0197907_10255730
456 Ga0197907_11006550
457 Ga0197907_11478162
458 Ga0206356_11780625
459 Ga0206349_1121072
460 Ga0206349_1406113
461 Ga0206349_1552130
462 Ga0206355_1174413
463 Ga0206355_1197395
464 Ga0206355_1266118
465 Ga0206351_10080020
466 Ga0206351_10182655
467 Ga0206351_10865376
468 Ga0206352_10533400
469 Ga0206350_10533127
470 Ga0206350_10636019
471 Ga0206354_10058407
472 Ga0206354_11529431
473 Ga0206353_10700683
474 Ga0154015_1288217
475 Ga0154015_1549952
476 Ga0154015_1636991
477 Ga0154015_1693551
478 Ga0224712_10000563
479 Ga0224712_10034317
480 Ga0224712_10050263
481 Ga0224712_10136755
482 Ga0224712_10196309
483 Ga0224712_10233768
484 Ga0224712_10307323
485 Ga0207656_10353507
486 Ga0207692_10005963
487 Ga0207710_10000012
488 Ga0207710_10000073
489 Ga0207710_10124009
490 Ga0207680_10246163
491 Ga0207685_10024788
492 Ga0207699_10013307
493 Ga0207699_10121242
494 Ga0207705_10000750
495 Ga0207705_10046197
496 Ga0207705_10082581
497 Ga0207705_10222045
498 Ga0207705_10429009
499 Ga0207684_10005468
500 Ga0207684_10087077
501 Ga0207707_11154572
502 Ga0207695_10187544
503 Ga0207695_10430457
504 Ga0207693_10138621
505 Ga0207693_10618720
506 Ga0207657_10126552
507 Ga0207657_10137696
508 Ga0207657_10147929
509 Ga0207657_10632267
510 Ga0207652_10228520
511 Ga0207652_10897857
512 Ga0207646_10001464
513 Ga0207646_10015670
514 Ga0207646_10063745
515 Ga0207646_10130074
516 Ga0207646_10344939
517 Ga0207646_10527212
518 Ga0207646_11096304
519 Ga0207687_10196506
520 Ga0207700_10070428
521 Ga0207664_10002454
522 Ga0207644_10809261
523 Ga0207690_10003378
524 Ga0207690_10242827
525 Ga0207669_10206334
526 Ga0207665_10005129
527 Ga0207711_10000400
528 Ga0207711_10104513
529 Ga0207661_10034746
530 Ga0207661_10091699
531 Ga0207667_10055092
532 Ga0207667_10511548
533 Ga0207651_11170200
534 Ga0207712_10090059
535 Ga0207703_10000029
536 Ga0207703_10045771
537 Ga0207678_10217117
538 Ga0207678_10434251
539 Ga0207702_10373937
540 Ga0207641_10008208
541 Ga0207428_10001011
542 Ga0268265_10000069
543 Ga0268264_10077005
544 Ga0265338_10133722
545 Ga0265325_10082018
546 Ga0265340_10014263
547 Ga0265340_10081157
548 Ga0265339_10061690
549 Ga0265316_10209905
550 Ga0307513_10085034
551 Ga0265313_10161803
552 Ga0307413_11035427
553 Ga0307410_10219591
554 Ga0307409_100040393
555 Ga0307415_100239679
556 Ga0373926_0000136
557 Ga0373923_0145673
558 Ga0373945_0266317
559 Ga0373943_0197815
560 Ga0373946_0008865
561 Ga0373946_0503693
562 Ga0373935_0002281
563 Ga0373935_0105585
564 Ga0373947_0000001
565 Ga0373925_0253706
566 Ga0395898_0088536
567 Ga0395901_0079099
568 Ga0439448_0119284
569 Ga0466970_0023210
570 Ga0466957_0653936
571 Ga0466967_0018767
572 Ga0466967_0642607
573 Ga0495592_0590680
574 Ga0495629_0518310
575 Ga0495653_0133688
576 Ga0495653_0504126
577 Ga0495580_0721014
578 Ga0495662_0308298
579 Ga0495664_0022153
580 Ga0495630_0122981
581 Ga0495665_0290570
582 Ga0495640_0064579
583 Ga0495667_0449986
584 Ga0495624_0043615
585 Ga0495674_0009301
586 Ga0495676_0161146
587 Ga0495680_0199521
588 Ga0496100_0365163
589 Ga0496101_0382554
590 Ga0496102_0032901
591 Ga0496103_0186889
592 Ga0496104_0002733
593 Ga0496105_0004232
594 Ga0496106_0096936
595 Ga0496107_0165000
596 Ga0496107_0411743
597 Ga0496108_0013113
598 Ga0496109_0014260
599 Ga0496110_0255682
600 Ga0496112_0008067
601 Ga0496112_1093069
602 Ga0496113_0135126
603 Ga0496113_0460777
604 Ga0496115_0004521
605 Ga0496116_0000292
606 Ga0496117_0011621
607 Ga0496117_0058306
608 Ga0496118_0001671
609 Ga0496118_0004040
610 Ga0496119_0000556
611 Ga0496119_0002934
612 Ga0496119_0066146
613 Ga0496120_0000120
614 Ga0496121_0005120
615 Ga0496121_0014650
616 Ga0496121_0344350
617 Ga0501042_0053606
618 Ga0501069_0136966
619 Ga0501070_0013037
620 Ga0501276_017952
621 nmdc:mga00v17_331561_c1
622 nmdc:mga00v17_78765_c1
623 nmdc:mga0yw44_267564_c1
624 nmdc:mga07m45_2436_c1
625 nmdc:mga05p37_162_c1
626 nmdc:mga09592_1580_c1
627 nmdc:mga0qj67_4993_c1
628 nmdc:mga06r32_106_c1
629 nmdc:mga08y16_49138_c1
630 nmdc:mga0n895_325843_c1
631 Ga0495601_0039180
632 Ga0495612_0102567
633 Ga0500583_0032893
634 Ga0587082_022541
635 Ga0587082_098189
636 2506866273
637 2508677672
638 2676199630
639 2689956457
640 2774844208
641 2774902367
642 2891329979
643 8002777889
644 8002790728

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01592

NifU_N

NifU-like N terminal domain

6

128

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jzw-assembly4.cif.gz_D crystal structure of sufu from bacillus subtilis with cys persulfurated 0.9366 2 145
8odq-assembly1.cif.gz_C sufs-sufu complex from mycobacterium tuberculosis 0.9334 3 152
6jzw-assembly3.cif.gz_C crystal structure of sufu from bacillus subtilis with cys persulfurated 0.929 2 148
2qq4-assembly2.cif.gz_D crystal structure of iron-sulfur cluster biosynthesis protein iscu (ttha1736) from thermus thermophilus hb8 0.9181 1 145
6jzv-assembly4.cif.gz_D crystal structure of sufu from bacillus subtilis 0.9177 2 147
ID Description Score Start End Superfamily
af_O53156_2_157_3.90.1010.10 Alpha Beta;Alpha-Beta Complex;Sufe protein. Chain: A; 0.962 3 152 3.90.1010.10
2qq4B00 Alpha Beta;Alpha-Beta Complex;Sufe protein. Chain: A; 0.9423 1 146 3.90.1010.10
2qq4B00 Alpha Beta;Alpha-Beta Complex;Sufe protein. Chain: A; 0.9292 1 146 3.90.1010.10
5xt5C00 Alpha Beta;Alpha-Beta Complex;Sufe protein. Chain: A; 0.8922 2 145 3.90.1010.10
af_O53156_2_157_3.90.1010.10 Alpha Beta;Alpha-Beta Complex;Sufe protein. Chain: A; 0.8898 3 152 3.90.1010.10
ID Description Score Start End GO Terms
AF-A0A5B1M9N4-F1-model_v4 SUF system NifU family Fe-S cluster assembly protein 0.9881 2 153 GO:0005506
GO:0016226
GO:0051536
AF-A0A6J6PVW4-F1-model_v4 Unannotated protein 0.9868 75 153 GO:0005506
GO:0016226
GO:0051536
AF-A0A2M9KRB0-F1-model_v4 Iron-sulfur cluster assembly scaffold protein 0.9853 1 153 GO:0005506
GO:0016226
GO:0051536
AF-A0A7Y9RW40-F1-model_v4 Nitrogen fixation NifU-like protein 0.9817 2 153 GO:0005506
GO:0016226
GO:0051536
AF-A0A495L286-F1-model_v4 Nitrogen fixation NifU-like protein 0.9801 1 153 GO:0005506
GO:0016226
GO:0051536

Map