F380638

General Info

Members Datasets Scaffolds Average Seq Length
275 175 260 348

Family's Representative Sequence

Representative Sequence 3300046512|Ga0495610_0004356|Ga0495610_0004356_1835_3052
Length 405
Sequence VEDTGARIVAILGPCVGPIGYKLVDVAAEAFWKGLRRRPGKPAVKTRPARFQIWEDPMTNNFPKLHNAAWPGIVGKGGDSEPIIPLDTLLRLTADAEVDGVKFDGIDLFITDPHVSIDSDADAVKRMADHIAGYGLKVGSFVAPIWGGAGGGSAMGSADDRKRFVEQVRKACAIGQQMRALGIRPTGGIRIDSSTGVEAWDQDPEGNTRLIARTFREAADIAEDHGEFLVAEGEICWGGMHSWREMVKLLELVDRPGVVGYQADMAHSMLYTLGYNAEQDRILPRNFDWSDQATLDAAYRTVADALRPWTMDFHVAQNDGTVFGSGDHEKTGRHCQVTDPNGRLDIARHAGYWLRDHDGNLTRRMRHICWDGCMFPNSVMEDQETWNAVLGAMIKVRDAHGWRED

Samples

Sample ID Description Type Environment
1 2643221629 Devosia sp. Root105 Isolate Unclassified
2 2643221662 Devosia sp. Root413D1 Isolate Unclassified
3 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
4 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
5 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
6 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
7 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
8 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
9 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
10 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
11 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
12 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
13 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
14 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
15 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
16 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
17 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
18 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
19 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
20 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
21 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
23 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
24 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
25 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
30 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
31 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
32 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
33 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
43 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
65 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
70 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
101 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
102 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
103 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
104 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
105 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
106 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
107 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
108 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
109 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
110 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
111 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
112 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
113 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
114 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
115 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
116 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
117 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
118 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
119 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
120 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
121 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
122 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
123 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
124 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
125 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
129 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
130 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
150 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
151 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
152 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
153 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
154 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
155 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
156 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
157 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
166 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
170 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
171 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
172 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
173 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.55
Metatranscriptomes 0
Isolates 5.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.09
Nodule 0
Rhizoplane 0
Rhizosphere 84.73
Stem 0
Stem Tuber 0
Unclassified 6.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1013378 3300002987 Bacteria 1901
2 JGI25151J46595_10000193 3300003187 Bacteria 75098
3 JGI25153J46596_10000049 3300003215 Bacteria 141434
4 rootH2_10054879 3300003320 Bacteria 8389
5 rootH1_10041375 3300003323 Bacteria 3265
6 Ga0065715_10004954 3300005293 Bacteria 4972
7 Ga0065707_10089763 3300005295 Bacteria 4246
8 Ga0070683_100055087 3300005329 Bacteria 3689
9 Ga0070690_100286286 3300005330 Bacteria 1177
10 Ga0070670_100154292 3300005331 Bacteria 1988
11 Ga0070680_100193207 3300005336 Bacteria 1715
12 Ga0070680_100341191 3300005336 Bacteria 1273
13 Ga0070682_100012928 3300005337 Bacteria 4792
14 Ga0070682_100073944 3300005337 Bacteria 2187
15 Ga0070660_100000709 3300005339 Bacteria 22037
16 Ga0070675_100024414 3300005354 Bacteria 4841
17 Ga0070674_100003051 3300005356 Bacteria 9315
18 Ga0070674_100027033 3300005356 Bacteria 3756
19 Ga0070667_100114251 3300005367 Bacteria 2344
20 Ga0070701_10057160 3300005438 Bacteria 2044
21 Ga0070700_100131571 3300005441 Bacteria 1689
22 Ga0070679_100060320 3300005530 Bacteria 3780
23 Ga0070697_100194630 3300005536 Bacteria 1722
24 Ga0068853_100033069 3300005539 Bacteria 4386
25 Ga0068853_100154427 3300005539 Bacteria 2067
26 Ga0070693_100088646 3300005547 Bacteria 1861
27 Ga0068855_100148606 3300005563 Bacteria 2665
28 Ga0068857_100219717 3300005577 Bacteria 1735
29 Ga0068852_100065772 3300005616 Bacteria 3164
30 Ga0068852_100205539 3300005616 Bacteria 1865
31 Ga0068866_10010348 3300005718 Bacteria 3996
32 Ga0081538_10014110 3300005981 Bacteria 6277
33 Ga0081540_1025358 3300005983 Bacteria 3413
34 Ga0075365_10077653 3300006038 Bacteria 2244
35 Ga0075364_10008060 3300006051 Bacteria 6281
36 Ga0075367_10148920 3300006178 Bacteria 1452
37 Ga0075370_10004835 3300006353 Bacteria 6603
38 Ga0075370_10027598 3300006353 Bacteria 3152
39 Ga0075431_100211075 3300006847 Bacteria 1983
40 Ga0075429_100037131 3300006880 Bacteria 4241
41 Ga0105240_10189119 3300009093 Bacteria 2422
42 Ga0105240_10232283 3300009093 Unclassified 2143
43 Ga0105240_10262293 3300009093 Bacteria 1992
44 Ga0105240_10334981 3300009093 Bacteria 1720
45 Ga0111539_10000051 3300009094 Bacteria 117607
46 Ga0105241_10007022 3300009174 Bacteria 8283
47 Ga0105237_10215776 3300009545 Bacteria 1919
48 Ga0105237_10233241 3300009545 Bacteria 1841
49 Ga0105249_10142962 3300009553 Bacteria 2296
50 Ga0105239_10300815 3300010375 Bacteria 1807
51 Ga0157373_10135682 3300013100 Bacteria 1730
52 Ga0157371_10026575 3300013102 Bacteria 4206
53 Ga0157371_10070512 3300013102 Bacteria 2474
54 Ga0157370_10167196 3300013104 Bacteria 2045
55 Ga0157370_10364618 3300013104 Bacteria 1331
56 Ga0157369_10073512 3300013105 Bacteria 3668
57 Ga0157369_10124847 3300013105 Bacteria 2730
58 Ga0157369_10387790 3300013105 Unclassified 1450
59 Ga0157378_10107832 3300013297 Bacteria 2549
60 Ga0157372_10170615 3300013307 Bacteria 2517
61 Ga0157372_10198866 3300013307 Bacteria 2321
62 Ga0157372_10231746 3300013307 Bacteria 2141
63 Ga0157372_10287661 3300013307 Bacteria 1911
64 Ga0157372_10721687 3300013307 Bacteria 1159
65 Ga0157380_10005105 3300014326 Bacteria 9172
66 Ga0157376_10280884 3300014969 Bacteria 1568
67 Ga0213873_10008949 3300021358 Bacteria 2063
68 Ga0209130_1001013 3300025284 Bacteria 21788
69 Ga0209130_1001490 3300025284 Bacteria 15195
70 Ga0209025_1000061 3300025294 Bacteria 304827
71 Ga0209758_1000029 3300025297 Bacteria 520787
72 Ga0209758_1000964 3300025297 Bacteria 38815
73 Ga0209050_1005871 3300025298 Bacteria 7514
74 Ga0207426_1000135 3300025302 Bacteria 202216
75 Ga0207426_1000451 3300025302 Bacteria 65459
76 Ga0209257_1000634 3300025304 Bacteria 56352
77 Ga0207682_10094315 3300025893 Bacteria 1302
78 Ga0207642_10094704 3300025899 Bacteria 1484
79 Ga0207705_10250208 3300025909 Bacteria 1352
80 Ga0207707_10039968 3300025912 Bacteria 4098
81 Ga0207695_10029614 3300025913 Bacteria 6043
82 Ga0207695_10056461 3300025913 Bacteria 4085
83 Ga0207695_10090103 3300025913 Bacteria 3083
84 Ga0207671_10193869 3300025914 Bacteria 1585
85 Ga0207660_10009548 3300025917 Bacteria 6280
86 Ga0207660_10180985 3300025917 Bacteria 1637
87 Ga0207660_10302852 3300025917 Bacteria 1273
88 Ga0207657_10002023 3300025919 Bacteria 21914
89 Ga0207657_10086613 3300025919 Bacteria 2621
90 Ga0207652_10001629 3300025921 Bacteria 19720
91 Ga0207652_10003315 3300025921 Bacteria 13336
92 Ga0207652_10172130 3300025921 Bacteria 1943
93 Ga0207659_10016661 3300025926 Bacteria 4788
94 Ga0207690_10206693 3300025932 Bacteria 1494
95 Ga0207686_10095612 3300025934 Bacteria 1972
96 Ga0207669_10006013 3300025937 Bacteria 5504
97 Ga0207669_10052055 3300025937 Bacteria 2457
98 Ga0207704_10060432 3300025938 Bacteria 2344
99 Ga0207691_10189562 3300025940 Bacteria 1794
100 Ga0207661_10114076 3300025944 Bacteria 2291
101 Ga0207667_10077764 3300025949 Bacteria 3440
102 Ga0207712_10237022 3300025961 Bacteria 1468
103 Ga0207668_10155331 3300025972 Bacteria 1777
104 Ga0207658_10122787 3300025986 Bacteria 2074
105 Ga0207639_10085386 3300026041 Bacteria 2510
106 Ga0207639_10256757 3300026041 Bacteria 1527
107 Ga0207708_10176357 3300026075 Bacteria 1695
108 Ga0207676_10223396 3300026095 Unclassified 1679
109 Ga0207674_10025082 3300026116 Bacteria 6363
110 Ga0207675_100043689 3300026118 Bacteria 4186
111 Ga0207675_100241208 3300026118 Bacteria 1747
112 Ga0207698_10058428 3300026142 Bacteria 2989
113 Ga0207698_10264472 3300026142 Bacteria 1582
114 Ga0209974_10012358 3300027876 Bacteria 2855
115 Ga0207428_10000376 3300027907 Bacteria 56585
116 Ga0268265_10066129 3300028380 Bacteria 2793
117 Ga0265319_1003679 3300028563 Bacteria 7896
118 Ga0265319_1005706 3300028563 Bacteria 5905
119 Ga0265318_10007455 3300028577 Bacteria 4946
120 Ga0265318_10009618 3300028577 Bacteria 4244
121 Ga0265318_10055026 3300028577 Bacteria 1490
122 Ga0265336_10008020 3300028666 Bacteria 3727
123 Ga0265338_10014334 3300028800 Bacteria 8829
124 Ga0316177_1128411 3300030731 Bacteria 4664
125 Ga0316183_1160955 3300030742 Bacteria 11940
126 Ga0316181_1182971 3300030744 Bacteria 6001
127 Ga0316182_1146643 3300030745 Bacteria 3043
128 Ga0265332_10008721 3300031238 Bacteria 4541
129 Ga0265320_10002958 3300031240 Bacteria 11616
130 Ga0265320_10010143 3300031240 Bacteria 5626
131 Ga0265325_10003846 3300031241 Bacteria 9650
132 Ga0265339_10000933 3300031249 Bacteria 22454
133 Ga0265339_10020116 3300031249 Bacteria 3904
134 Ga0265331_10000426 3300031250 Bacteria 42359
135 Ga0265327_10044058 3300031251 Bacteria 2382
136 Ga0265327_10051486 3300031251 Bacteria 2150
137 Ga0265316_10122970 3300031344 Bacteria 1959
138 Ga0307513_10013449 3300031456 Bacteria 10040
139 Ga0307513_10216374 3300031456 Bacteria 1741
140 Ga0265313_10000802 3300031595 Bacteria 31726
141 Ga0265313_10085035 3300031595 Bacteria 1430
142 Ga0265314_10000351 3300031711 Bacteria 64055
143 Ga0307405_10054057 3300031731 Bacteria 2505
144 Ga0307413_10012461 3300031824 Bacteria 4235
145 Ga0307410_10054011 3300031852 Bacteria 2721
146 Ga0373935_0187887 3300035692 Bacteria 1422
147 Ga0451853_2304803 3300041512 Bacteria 2111
148 Ga0439431_0020547 3300041997 Bacteria 1578
149 Ga0451577_0000490 3300042876 Bacteria 67079
150 Ga0466972_0011108 3300044658 Bacteria 4520
151 Ga0453684_0000987 3300044712 Bacteria 92919
152 Ga0466959_0025437 3300045049 Bacteria 4387
153 Ga0451576_0009604 3300045051 Bacteria 11194
154 Ga0451576_0506568 3300045051 Bacteria 1268
155 Ga0495610_0004356 3300046512 Bacteria 10504
156 Ga0495630_0000085 3300046517 Bacteria 73665
157 Ga0495686_0065810 3300047472 Bacteria 2240
158 Ga0496121_0116081 3300048924 Bacteria 2031
159 Ga0501032_0006049 3300049569 Bacteria 8924
160 Ga0501032_0046673 3300049569 Bacteria 2927
161 Ga0501032_0132358 3300049569 Bacteria 1645
162 Ga0501032_0176374 3300049569 Bacteria 1400
163 Ga0501033_0001198 3300049570 Bacteria 23371
164 Ga0501033_0003439 3300049570 Bacteria 13025
165 Ga0501033_0058827 3300049570 Bacteria 2838
166 Ga0501033_0068416 3300049570 Bacteria 2611
167 Ga0501033_0087648 3300049570 Bacteria 2278
168 Ga0501033_0148532 3300049570 Bacteria 1692
169 Ga0501033_0169411 3300049570 Bacteria 1569
170 Ga0501034_0016577 3300049571 Bacteria 7554
171 Ga0501034_0037977 3300049571 Bacteria 4877
172 Ga0501034_0043168 3300049571 Bacteria 4564
173 Ga0501034_0053228 3300049571 Bacteria 4077
174 Ga0501034_0118985 3300049571 Bacteria 2628
175 Ga0501034_0187006 3300049571 Bacteria 2034
176 Ga0501034_0191214 3300049571 Bacteria 2009
177 Ga0501034_0209016 3300049571 Bacteria 1907
178 Ga0501036_0057591 3300049572 Bacteria 3292
179 Ga0501037_0000077 3300049573 Bacteria 91081
180 Ga0501037_0047236 3300049573 Bacteria 3156
181 Ga0501037_0135234 3300049573 Bacteria 1766
182 Ga0501038_0098725 3300049574 Bacteria 2435
183 Ga0501038_0239523 3300049574 Bacteria 1441
184 Ga0501038_0240610 3300049574 Bacteria 1437
185 Ga0501040_0011220 3300049576 Bacteria 5863
186 Ga0501042_0037350 3300049578 Bacteria 3448
187 Ga0501043_0000114 3300049579 Bacteria 75782
188 Ga0501043_0023814 3300049579 Unclassified 4803
189 Ga0501043_0126877 3300049579 Bacteria 2001
190 Ga0501043_0138550 3300049579 Bacteria 1906
191 Ga0501043_0196676 3300049579 Bacteria 1566
192 Ga0501046_0000333 3300049580 Bacteria 47539
193 Ga0501046_0006531 3300049580 Bacteria 10313
194 Ga0501046_0088884 3300049580 Bacteria 2379
195 Ga0501046_0102604 3300049580 Bacteria 2193
196 Ga0501047_0006807 3300049581 Bacteria 10742
197 Ga0501047_0008752 3300049581 Bacteria 9553
198 Ga0501047_0044599 3300049581 Bacteria 4285
199 Ga0501047_0121851 3300049581 Bacteria 2489
200 Ga0501047_0416742 3300049581 Bacteria 1175
201 Ga0501067_0049331 3300049583 Bacteria 2333
202 Ga0501069_0000016 3300049585 Bacteria 142565
203 Ga0501070_0000450 3300049586 Bacteria 37447
204 Ga0501070_0051692 3300049586 Bacteria 3411
205 Ga0501070_0079128 3300049586 Bacteria 2720
206 Ga0501070_0269076 3300049586 Bacteria 1392
207 Ga0501070_0305170 3300049586 Bacteria 1296
208 Ga0501071_0002157 3300049587 Bacteria 11818
209 Ga0501073_0025527 3300049589 Bacteria 4236
210 Ga0501073_0033858 3300049589 Bacteria 3636
211 Ga0501073_0043683 3300049589 Bacteria 3160
212 Ga0501074_0000067 3300049590 Bacteria 49686
213 Ga0501074_0146018 3300049590 Bacteria 1691
214 Ga0501075_0024217 3300049591 Bacteria 4448
215 Ga0501076_0045956 3300049592 Bacteria 3449
216 Ga0501076_0069235 3300049592 Bacteria 2820
217 Ga0501077_0010104 3300049593 Bacteria 5875
218 Ga0501079_0073624 3300049741 Bacteria 2640
219 Ga0501079_0419096 3300049741 Bacteria 1051
220 Ga0501080_0000591 3300049742 Bacteria 28648
221 Ga0501080_0018424 3300049742 Bacteria 6462
222 Ga0501080_0076854 3300049742 Bacteria 3105
223 Ga0501080_0079978 3300049742 Bacteria 3038
224 Ga0501081_0004033 3300049743 Bacteria 9419
225 Ga0501083_0000111 3300049744 Bacteria 55529
226 Ga0501083_0064134 3300049744 Bacteria 2448
227 Ga0501083_0081307 3300049744 Bacteria 2148
228 Ga0501279_001321 3300049775 Bacteria 3257
229 Ga0501035_0000048 3300049822 Bacteria 146466
230 Ga0501035_0111044 3300049822 Bacteria 2403
231 Ga0501035_0117855 3300049822 Bacteria 2323
232 Ga0501044_0000003 3300049823 Bacteria 345647
233 Ga0501044_0059837 3300049823 Bacteria 3902
234 Ga0501044_0120058 3300049823 Bacteria 2630
235 Ga0501044_0141727 3300049823 Bacteria 2392
236 Ga0501044_0197835 3300049823 Bacteria 1969
237 Ga0501044_0204706 3300049823 Bacteria 1930
238 Ga0501044_0341302 3300049823 Unclassified 1419
239 Ga0501045_0005942 3300049824 Bacteria 8440
240 nmdc:mga00v17_44377_c1 3300050491 Bacteria 2681
241 nmdc:mga0k408_97816_c1 3300050493 Bacteria 1729
242 nmdc:mga06z11_33070_c1 3300050494 Bacteria 2527
243 nmdc:mga05p37_246437_c1 3300050507 Bacteria 2145
244 nmdc:mga09592_97490_c1 3300050508 Bacteria 2516
245 nmdc:mga06r32_36476_c1 3300050510 Bacteria 4646
246 nmdc:mga08y16_237_c1 3300050511 Bacteria 49310
247 nmdc:mga08y16_63907_c1 3300050511 Bacteria 3844
248 nmdc:mga0a205_103082_c1 3300050515 Bacteria 2390
249 Ga0500562_027689 3300053108 Bacteria 1488
250 Ga0500595_001082 3300053119 Bacteria 15117
251 Ga0500642_0000851 3300053130 Bacteria 8898
252 Ga0500616_0008017 3300053153 Bacteria 6617
253 Ga0500656_005783 3300053732 Bacteria 1234
254 Ga0501084_0071685 3300054114 Bacteria 2901
255 Ga0501084_0291033 3300054114 Bacteria 1379
256 Ga0501084_0372800 3300054114 Bacteria 1206
257 Ga0501082_0000953 3300060353 Bacteria 25552
258 Ga0501082_0189280 3300060353 Bacteria 1790
259 Ga0501082_0203231 3300060353 Bacteria 1724
260 Ga0501082_0204168 3300060353 Bacteria 1719

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049775 Ga0501279_001321 Ga0501279_001321_1470_2318 280
2 3300049571 Ga0501034_0191214 Ga0501034_0191214_1058_1999 313
3 3300050515 nmdc:mga0a205_103082_c1 nmdc:mga0a205_103082_c1_1285_2268 325
4 3300049569 Ga0501032_0176374 Ga0501032_0176374_118_1194 331
5 3300049581 Ga0501047_0121851 Ga0501047_0121851_1227_2303 331
6 3300049822 Ga0501035_0111044 Ga0501035_0111044_497_1573 331
7 3300049823 Ga0501044_0204706 Ga0501044_0204706_491_1567 331
8 3300060353 Ga0501082_0204168 Ga0501082_0204168_419_1468 332
9 3300049571 Ga0501034_0118985 Ga0501034_0118985_709_1764 333
10 3300049581 Ga0501047_0416742 Ga0501047_0416742_110_1165 333
11 3300049586 Ga0501070_0269076 Ga0501070_0269076_110_1165 333
12 3300005339 Ga0070660_100000709 Ga0070660_1000007099 335
13 3300005438 Ga0070701_10057160 Ga0070701_100571602 335
14 3300013102 Ga0157371_10026575 Ga0157371_100265753 335
15 3300013307 Ga0157372_10231746 Ga0157372_102317462 335
16 3300025919 Ga0207657_10002023 Ga0207657_100020239 335
17 3300050491 nmdc:mga00v17_44377_c1 nmdc:mga00v17_44377_c1_1268_2281 335
18 3300050494 nmdc:mga06z11_33070_c1 nmdc:mga06z11_33070_c1_33_1046 335
19 3300050511 nmdc:mga08y16_63907_c1 nmdc:mga08y16_63907_c1_2480_3490 335
20 3300005293 Ga0065715_10004954 Ga0065715_100049543 336
21 3300049741 Ga0501079_0419096 Ga0501079_0419096_11_1027 336
22 3300054114 Ga0501084_0372800 Ga0501084_0372800_156_1169 336
23 3300042876 Ga0451577_0000490 Ga0451577_0000490_63155_64180 339
24 3300044712 Ga0453684_0000987 Ga0453684_0000987_75002_76027 339
25 3300045051 Ga0451576_0506568 Ga0451576_0506568_14_1039 339
26 3300005331 Ga0070670_100154292 Ga0070670_1001542922 340
27 3300005354 Ga0070675_100024414 Ga0070675_1000244142 340
28 3300025926 Ga0207659_10016661 Ga0207659_100166616 340
29 3300049569 Ga0501032_0006049 Ga0501032_0006049_1002_2027 340
30 3300049570 Ga0501033_0001198 Ga0501033_0001198_14202_15227 340
31 3300049572 Ga0501036_0057591 Ga0501036_0057591_12_1037 340
32 3300049573 Ga0501037_0000077 Ga0501037_0000077_78585_79610 340
33 3300049579 Ga0501043_0000114 Ga0501043_0000114_36937_37962 340
34 3300049585 Ga0501069_0000016 Ga0501069_0000016_38260_39285 340
35 3300049586 Ga0501070_0000450 Ga0501070_0000450_22510_23535 340
36 3300049587 Ga0501071_0002157 Ga0501071_0002157_9164_10198 340
37 3300049589 Ga0501073_0033858 Ga0501073_0033858_1870_2895 340
38 3300049590 Ga0501074_0000067 Ga0501074_0000067_22808_23833 340
39 3300049742 Ga0501080_0000591 Ga0501080_0000591_1876_2901 340
40 3300049744 Ga0501083_0000111 Ga0501083_0000111_39060_40085 340
41 3300049822 Ga0501035_0000048 Ga0501035_0000048_140091_141116 340
42 3300049823 Ga0501044_0000003 Ga0501044_0000003_112862_113887 340
43 3300049569 Ga0501032_0132358 Ga0501032_0132358_443_1474 341
44 3300049571 Ga0501034_0016577 Ga0501034_0016577_3881_4912 341
45 3300049573 Ga0501037_0047236 Ga0501037_0047236_117_1148 341
46 3300049574 Ga0501038_0098725 Ga0501038_0098725_264_1295 341
47 3300049579 Ga0501043_0023814 Ga0501043_0023814_3700_4731 341
48 iso_pu_bacteria 2818991460 2819678439 341
49 iso_pu_bacteria 2929177148 2929180837 341
50 iso_pu_bacteria 2945977869 2945983235 341
51 iso_pu_bacteria 2946013367 2946017374 341
52 iso_pu_bacteria 3003233435 3003236411 341
53 3300006880 Ga0075429_100037131 Ga0075429_1000371313 342
54 3300050508 nmdc:mga09592_97490_c1 nmdc:mga09592_97490_c1_137_1171 342
55 3300050510 nmdc:mga06r32_36476_c1 nmdc:mga06r32_36476_c1_1040_2074 342
56 iso_pu_bacteria 2840677318 2840677744 342
57 iso_pu_bacteria 2842903701 2842908022 342
58 iso_pu_bacteria 2896085136 2896085562 342
59 3300028563 Ga0265319_1003679 Ga0265319_10036795 343
60 3300028563 Ga0265319_1005706 Ga0265319_10057064 343
61 3300028577 Ga0265318_10007455 Ga0265318_100074555 343
62 3300028577 Ga0265318_10009618 Ga0265318_100096182 343
63 3300028577 Ga0265318_10055026 Ga0265318_100550262 343
64 3300031240 Ga0265320_10002958 Ga0265320_100029588 343
65 3300031240 Ga0265320_10010143 Ga0265320_100101432 343
66 3300031251 Ga0265327_10051486 Ga0265327_100514862 343
67 3300049569 Ga0501032_0046673 Ga0501032_0046673_790_1827 343
68 3300049570 Ga0501033_0003439 Ga0501033_0003439_2050_3087 343
69 3300049574 Ga0501038_0240610 Ga0501038_0240610_279_1316 343
70 3300049579 Ga0501043_0138550 Ga0501043_0138550_74_1111 343
71 3300049580 Ga0501046_0000333 Ga0501046_0000333_10553_11590 343
72 3300049580 Ga0501046_0006531 Ga0501046_0006531_8483_9523 343
73 3300049581 Ga0501047_0006807 Ga0501047_0006807_1276_2316 343
74 3300049581 Ga0501047_0044599 Ga0501047_0044599_3208_4245 343
75 3300049742 Ga0501080_0076854 Ga0501080_0076854_58_1095 343
76 3300049822 Ga0501035_0117855 Ga0501035_0117855_137_1177 343
77 3300049823 Ga0501044_0120058 Ga0501044_0120058_734_1771 343
78 3300003320 rootH2_10054879 rootH2_100548792 344
79 3300003323 rootH1_10041375 rootH1_100413753 344
80 3300005329 Ga0070683_100055087 Ga0070683_1000550873 344
81 3300005330 Ga0070690_100286286 Ga0070690_1002862861 344
82 3300013104 Ga0157370_10364618 Ga0157370_103646182 344
83 3300013105 Ga0157369_10124847 Ga0157369_101248472 344
84 3300013297 Ga0157378_10107832 Ga0157378_101078322 344
85 3300025284 Ga0209130_1001490 Ga0209130_10014908 344
86 3300025302 Ga0207426_1000135 Ga0207426_100013530 344
87 3300025940 Ga0207691_10189562 Ga0207691_101895621 344
88 3300025944 Ga0207661_10114076 Ga0207661_101140762 344
89 3300025986 Ga0207658_10122787 Ga0207658_101227872 344
90 3300026095 Ga0207676_10223396 Ga0207676_102233961 344
91 3300044658 Ga0466972_0011108 Ga0466972_0011108_76_1116 344
92 3300045049 Ga0466959_0025437 Ga0466959_0025437_1574_2614 344
93 3300049570 Ga0501033_0087648 Ga0501033_0087648_575_1618 344
94 3300049823 Ga0501044_0341302 Ga0501044_0341302_149_1189 344
95 iso_pu_bacteria 2643221629 2644169816 344
96 iso_pu_bacteria 2643221662 2644350452 344
97 iso_pu_bacteria 2821443989 2821446757 344
98 iso_pu_bacteria 2844533157 2844533284 344
99 3300005336 Ga0070680_100193207 Ga0070680_1001932072 345
100 3300005337 Ga0070682_100012928 Ga0070682_1000129284 345
101 3300005337 Ga0070682_100073944 Ga0070682_1000739442 345
102 3300005356 Ga0070674_100027033 Ga0070674_1000270333 345
103 3300005367 Ga0070667_100114251 Ga0070667_1001142511 345
104 3300005530 Ga0070679_100060320 Ga0070679_1000603202 345
105 3300005536 Ga0070697_100194630 Ga0070697_1001946302 345
106 3300005539 Ga0068853_100154427 Ga0068853_1001544272 345
107 3300005547 Ga0070693_100088646 Ga0070693_1000886461 345
108 3300005563 Ga0068855_100148606 Ga0068855_1001486062 345
109 3300005577 Ga0068857_100219717 Ga0068857_1002197172 345
110 3300005616 Ga0068852_100065772 Ga0068852_1000657722 345
111 3300005616 Ga0068852_100205539 Ga0068852_1002055392 345
112 3300005718 Ga0068866_10010348 Ga0068866_100103482 345
113 3300009093 Ga0105240_10189119 Ga0105240_101891192 345
114 3300009093 Ga0105240_10232283 Ga0105240_102322831 345
115 3300009093 Ga0105240_10334981 Ga0105240_103349812 345
116 3300009174 Ga0105241_10007022 Ga0105241_100070222 345
117 3300009545 Ga0105237_10233241 Ga0105237_102332412 345
118 3300009553 Ga0105249_10142962 Ga0105249_101429622 345
119 3300010375 Ga0105239_10300815 Ga0105239_103008151 345
120 3300013100 Ga0157373_10135682 Ga0157373_101356822 345
121 3300013102 Ga0157371_10070512 Ga0157371_100705122 345
122 3300013104 Ga0157370_10167196 Ga0157370_101671962 345
123 3300013105 Ga0157369_10073512 Ga0157369_100735122 345
124 3300013105 Ga0157369_10387790 Ga0157369_103877902 345
125 3300013307 Ga0157372_10170615 Ga0157372_101706152 345
126 3300013307 Ga0157372_10198866 Ga0157372_101988662 345
127 3300013307 Ga0157372_10287661 Ga0157372_102876612 345
128 3300013307 Ga0157372_10721687 Ga0157372_107216871 345
129 3300025909 Ga0207705_10250208 Ga0207705_102502082 345
130 3300025912 Ga0207707_10039968 Ga0207707_100399681 345
131 3300025913 Ga0207695_10056461 Ga0207695_100564614 345
132 3300025913 Ga0207695_10090103 Ga0207695_100901033 345
133 3300025917 Ga0207660_10009548 Ga0207660_100095482 345
134 3300025917 Ga0207660_10180985 Ga0207660_101809852 345
135 3300025919 Ga0207657_10086613 Ga0207657_100866132 345
136 3300025921 Ga0207652_10001629 Ga0207652_1000162913 345
137 3300025921 Ga0207652_10003315 Ga0207652_100033156 345
138 3300025921 Ga0207652_10172130 Ga0207652_101721302 345
139 3300025932 Ga0207690_10206693 Ga0207690_102066932 345
140 3300025934 Ga0207686_10095612 Ga0207686_100956121 345
141 3300025937 Ga0207669_10052055 Ga0207669_100520552 345
142 3300025949 Ga0207667_10077764 Ga0207667_100777643 345
143 3300026041 Ga0207639_10256757 Ga0207639_102567572 345
144 3300026116 Ga0207674_10025082 Ga0207674_100250824 345
145 3300026142 Ga0207698_10058428 Ga0207698_100584282 345
146 3300030731 Ga0316177_1128411 Ga0316177_11284113 345
147 3300030742 Ga0316183_1160955 Ga0316183_11609554 345
148 3300030744 Ga0316181_1182971 Ga0316181_11829716 345
149 3300030745 Ga0316182_1146643 Ga0316182_11466433 345
150 3300041997 Ga0439431_0020547 Ga0439431_0020547_109_1152 345
151 3300047472 Ga0495686_0065810 Ga0495686_0065810_487_1536 345
152 3300049570 Ga0501033_0058827 Ga0501033_0058827_582_1634 345
153 3300049570 Ga0501033_0068416 Ga0501033_0068416_1270_2316 345
154 3300049570 Ga0501033_0148532 Ga0501033_0148532_163_1209 345
155 3300049571 Ga0501034_0037977 Ga0501034_0037977_524_1570 345
156 3300049571 Ga0501034_0043168 Ga0501034_0043168_3413_4465 345
157 3300049571 Ga0501034_0187006 Ga0501034_0187006_605_1657 345
158 3300049571 Ga0501034_0209016 Ga0501034_0209016_544_1587 345
159 3300049573 Ga0501037_0135234 Ga0501037_0135234_35_1081 345
160 3300049579 Ga0501043_0196676 Ga0501043_0196676_103_1155 345
161 3300049581 Ga0501047_0008752 Ga0501047_0008752_2147_3199 345
162 3300049586 Ga0501070_0079128 Ga0501070_0079128_1206_2252 345
163 3300049589 Ga0501073_0025527 Ga0501073_0025527_1618_2664 345
164 3300049742 Ga0501080_0079978 Ga0501080_0079978_915_1964 345
165 3300053108 Ga0500562_027689 Ga0500562_027689_67_1116 345
166 iso_pu_bacteria 2939669807 2939674144 345
167 3300006038 Ga0075365_10077653 Ga0075365_100776532 346
168 3300006051 Ga0075364_10008060 Ga0075364_100080606 346
169 3300006353 Ga0075370_10004835 Ga0075370_100048353 346
170 3300006847 Ga0075431_100211075 Ga0075431_1002110752 346
171 3300009093 Ga0105240_10262293 Ga0105240_102622931 346
172 3300014969 Ga0157376_10280884 Ga0157376_102808841 346
173 3300021358 Ga0213873_10008949 Ga0213873_100089492 346
174 3300025913 Ga0207695_10029614 Ga0207695_100296143 346
175 3300025914 Ga0207671_10193869 Ga0207671_101938692 346
176 3300026118 Ga0207675_100241208 Ga0207675_1002412083 346
177 3300026142 Ga0207698_10264472 Ga0207698_102644722 346
178 3300027876 Ga0209974_10012358 Ga0209974_100123583 346
179 3300031238 Ga0265332_10008721 Ga0265332_100087212 346
180 3300031241 Ga0265325_10003846 Ga0265325_100038463 346
181 3300031249 Ga0265339_10000933 Ga0265339_1000093311 346
182 3300031250 Ga0265331_10000426 Ga0265331_1000042616 346
183 3300031251 Ga0265327_10044058 Ga0265327_100440582 346
184 3300031595 Ga0265313_10000802 Ga0265313_1000080211 346
185 3300031711 Ga0265314_10000351 Ga0265314_1000035152 346
186 3300031731 Ga0307405_10054057 Ga0307405_100540572 346
187 3300049570 Ga0501033_0169411 Ga0501033_0169411_146_1195 346
188 3300049571 Ga0501034_0053228 Ga0501034_0053228_1794_2858 346
189 3300049574 Ga0501038_0239523 Ga0501038_0239523_139_1188 346
190 3300049576 Ga0501040_0011220 Ga0501040_0011220_1802_2851 346
191 3300049578 Ga0501042_0037350 Ga0501042_0037350_1697_2746 346
192 3300049579 Ga0501043_0126877 Ga0501043_0126877_928_1983 346
193 3300049580 Ga0501046_0088884 Ga0501046_0088884_489_1544 346
194 3300049580 Ga0501046_0102604 Ga0501046_0102604_222_1271 346
195 3300049590 Ga0501074_0146018 Ga0501074_0146018_503_1567 346
196 3300049591 Ga0501075_0024217 Ga0501075_0024217_3239_4288 346
197 3300049592 Ga0501076_0045956 Ga0501076_0045956_827_1876 346
198 3300049592 Ga0501076_0069235 Ga0501076_0069235_1700_2755 346
199 3300049593 Ga0501077_0010104 Ga0501077_0010104_386_1435 346
200 3300049741 Ga0501079_0073624 Ga0501079_0073624_191_1240 346
201 3300049742 Ga0501080_0018424 Ga0501080_0018424_2864_3913 346
202 3300049743 Ga0501081_0004033 Ga0501081_0004033_5338_6387 346
203 3300049744 Ga0501083_0064134 Ga0501083_0064134_386_1441 346
204 3300049744 Ga0501083_0081307 Ga0501083_0081307_996_2045 346
205 3300049823 Ga0501044_0059837 Ga0501044_0059837_1568_2623 346
206 3300049824 Ga0501045_0005942 Ga0501045_0005942_5060_6109 346
207 3300054114 Ga0501084_0071685 Ga0501084_0071685_495_1544 346
208 3300054114 Ga0501084_0291033 Ga0501084_0291033_75_1130 346
209 3300060353 Ga0501082_0000953 Ga0501082_0000953_7505_8554 346
210 3300060353 Ga0501082_0189280 Ga0501082_0189280_199_1254 346
211 3300060353 Ga0501082_0203231 Ga0501082_0203231_285_1334 346
212 3300003215 JGI25153J46596_10000049 JGI25153J46596_1000004978 347
213 3300005295 Ga0065707_10089763 Ga0065707_100897632 347
214 3300005336 Ga0070680_100341191 Ga0070680_1003411911 347
215 3300005356 Ga0070674_100003051 Ga0070674_1000030517 347
216 3300005441 Ga0070700_100131571 Ga0070700_1001315712 347
217 3300005981 Ga0081538_10014110 Ga0081538_100141102 347
218 3300006178 Ga0075367_10148920 Ga0075367_101489202 347
219 3300006353 Ga0075370_10027598 Ga0075370_100275983 347
220 3300009094 Ga0111539_10000051 Ga0111539_1000005169 347
221 3300009545 Ga0105237_10215776 Ga0105237_102157762 347
222 3300014326 Ga0157380_10005105 Ga0157380_100051059 347
223 3300025297 Ga0209758_1000029 Ga0209758_1000029171 347
224 3300025298 Ga0209050_1005871 Ga0209050_10058713 347
225 3300025304 Ga0209257_1000634 Ga0209257_100063431 347
226 3300025893 Ga0207682_10094315 Ga0207682_100943151 347
227 3300025899 Ga0207642_10094704 Ga0207642_100947041 347
228 3300025917 Ga0207660_10302852 Ga0207660_103028521 347
229 3300025937 Ga0207669_10006013 Ga0207669_100060136 347
230 3300025938 Ga0207704_10060432 Ga0207704_100604322 347
231 3300025961 Ga0207712_10237022 Ga0207712_102370221 347
232 3300025972 Ga0207668_10155331 Ga0207668_101553311 347
233 3300026075 Ga0207708_10176357 Ga0207708_101763572 347
234 3300026118 Ga0207675_100043689 Ga0207675_1000436893 347
235 3300027907 Ga0207428_10000376 Ga0207428_1000037647 347
236 3300028380 Ga0268265_10066129 Ga0268265_100661291 347
237 3300028666 Ga0265336_10008020 Ga0265336_100080202 347
238 3300028800 Ga0265338_10014334 Ga0265338_100143347 347
239 3300031249 Ga0265339_10020116 Ga0265339_100201162 347
240 3300031344 Ga0265316_10122970 Ga0265316_101229702 347
241 3300031456 Ga0307513_10013449 Ga0307513_1001344910 347
242 3300031456 Ga0307513_10216374 Ga0307513_102163742 347
243 3300031595 Ga0265313_10085035 Ga0265313_100850352 347
244 3300031824 Ga0307413_10012461 Ga0307413_100124612 347
245 3300031852 Ga0307410_10054011 Ga0307410_100540112 347
246 3300035692 Ga0373935_0187887 Ga0373935_0187887_60_1106 347
247 3300041512 Ga0451853_2304803 Ga0451853_2304803_26_1081 347
248 3300048924 Ga0496121_0116081 Ga0496121_0116081_47_1102 347
249 3300049583 Ga0501067_0049331 Ga0501067_0049331_117_1172 347
250 3300049586 Ga0501070_0051692 Ga0501070_0051692_2291_3346 347
251 3300049586 Ga0501070_0305170 Ga0501070_0305170_140_1198 347
252 3300049589 Ga0501073_0043683 Ga0501073_0043683_286_1341 347
253 3300049823 Ga0501044_0141727 Ga0501044_0141727_547_1602 347
254 3300049823 Ga0501044_0197835 Ga0501044_0197835_62_1120 347
255 3300050493 nmdc:mga0k408_97816_c1 nmdc:mga0k408_97816_c1_65_1120 347
256 3300050507 nmdc:mga05p37_246437_c1 nmdc:mga05p37_246437_c1_49_1140 347
257 3300050511 nmdc:mga08y16_237_c1 nmdc:mga08y16_237_c1_29120_30175 347
258 3300053119 Ga0500595_001082 Ga0500595_001082_37_1092 347
259 3300053130 Ga0500642_0000851 Ga0500642_0000851_6593_7648 347
260 3300053153 Ga0500616_0008017 Ga0500616_0008017_77_1264 347
261 3300053732 Ga0500656_005783 Ga0500656_005783_85_1140 347
262 iso_pu_bacteria 2687453257 2688069121 347
263 iso_pu_bacteria 2889415604 2889417386 347
264 3300002987 JGI25159J45721_1013378 JGI25159J45721_10133782 348
265 3300003187 JGI25151J46595_10000193 JGI25151J46595_1000019339 348
266 3300005539 Ga0068853_100033069 Ga0068853_1000330692 348
267 3300005983 Ga0081540_1025358 Ga0081540_10253583 348
268 3300025284 Ga0209130_1001013 Ga0209130_10010137 348
269 3300025294 Ga0209025_1000061 Ga0209025_1000061184 348
270 3300025297 Ga0209758_1000964 Ga0209758_100096429 348
271 3300025302 Ga0207426_1000451 Ga0207426_10004517 348
272 3300026041 Ga0207639_10085386 Ga0207639_100853862 348
273 3300045051 Ga0451576_0009604 Ga0451576_0009604_5857_7227 348
274 3300046512 Ga0495610_0004356 Ga0495610_0004356_1835_3052 348
275 3300046517 Ga0495630_0000085 Ga0495630_0000085_4605_5870 348

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01261

AP_endonuc_2

Xylose isomerase-like TIM barrel

95

352

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wqo-assembly1.cif.gz_B crystal structure of d-tagatose 3-epimerase-like protein 0.7657 7 342
3wqo-assembly1.cif.gz_B crystal structure of d-tagatose 3-epimerase-like protein 0.7554 7 342
3cqi-assembly1.cif.gz_B crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b) complex with sulfate 0.7164 8 341
5hmq-assembly3.cif.gz_E xylose isomerase-like tim barrel/4-hydroxyphenylpyruvate dioxygenase fusion protein 0.7074 7 343
1i6n-assembly1.cif.gz_A 1.8 a crystal structure of ioli protein with a binding zinc atom 0.7044 7 341
ID Description Score Start End Superfamily
af_Q59009_1_251_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8122 7 340 3.20.20.150
3wqoA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.812 7 342 3.20.20.150
af_Q59009_1_251_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8065 7 340 3.20.20.150
3wqoA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.7991 7 342 3.20.20.150
af_P45541_1_270_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.7926 7 341 3.20.20.150
ID Description Score Start End GO Terms
AF-A0A2V6C599-F1-model_v4 Xylose isomerase 0.9843 1 348 GO:0016853
AF-A0A3D3DGN7-F1-model_v4 Xylose isomerase 0.9843 3 348 GO:0016853
AF-A0A2V5TRW5-F1-model_v4 Xylose isomerase 0.9837 1 348 GO:0016853
AF-A0A2N9NF47-F1-model_v4 Xylose isomerase domain-containing protein TIM barrel 0.9831 2 348 GO:0016853
AF-A0A1P9X2V6-F1-model_v4 Xylose isomerase 0.9826 2 347 GO:0016853

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pLDDT pTM Quality
92.15 0.91 High
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Predicted Structure (AlphaFold2)

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