F379528

General Info

Members Datasets Scaffolds Average Seq Length
274 176 548 323

Family's Representative Sequence

Representative Sequence 3300005365|Ga0070688_100074819|Ga0070688_1000748192
Length 367
Sequence MLLHSLYEIRRQAVKSFAIAITPSQGVADSAPTRALTSNGSRMSLTEDVSKLQNHFTSLKSEVGKVLVGQDEMLHRLLLGLIAGGHVLLEGVPGLAKTLVVRTLADALDGTFSRIQFTPDMLPGDVVGTQIYNPREGSYTVKKGPVFGNFILADEINRAPAKVQSALLEAMQERQVTLGDQTLPLSEPFLVLATQNPIEQEGTYPLPEAQLDRFLLKVKVGYPTKDDEVKILDRMAGAAPEPTASKVMTCEQILAARQLARQVFVDDKLKRYAVDVVAATRDPKAAGLTALAPLIDNGASPRASIALVKVAKAHALLSGRDYISPHDIKTIAHDVLRHRILISYEAEAQGKTTDHVIAQVLENIPVP

Samples

Sample ID Description Type Environment
1 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
82 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
83 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
84 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
85 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
86 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
87 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
88 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
91 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
92 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
93 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
100 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
101 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
102 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
105 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
111 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
112 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
115 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
118 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
119 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
120 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
121 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
122 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
123 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
124 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
125 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
126 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
127 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
128 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
129 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
132 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
145 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
146 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
147 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
155 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
156 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
160 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
163 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
164 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
165 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
166 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
167 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
168 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
171 2643221568 Rhizobium sp. Root564 Isolate Unclassified
172 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
173 2916178963 Pseudoalteromonas rhizosphaerae RA15 Isolate Rhizosphere
174 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
175 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
176 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 97.45
Metatranscriptomes 0.36
Isolates 2.19

Biome Distribution

Category Percentage (%)
Aerial Root 0.36
Bulb 0
Endosphere 2.92
Nodule 0
Rhizoplane 0
Rhizosphere 89.05
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070688_100074819 3300005365 Bacteria 2176
2 Ga0065715_10187968 3300005293 Bacteria 1433
3 Ga0065707_10089602 3300005295 Bacteria 4320
4 Ga0068869_100042039 3300005334 Bacteria 3275
5 Ga0068869_100068214 3300005334 Bacteria 2626
6 Ga0070689_100002252 3300005340 Bacteria 12533
7 Ga0070689_100146423 3300005340 Bacteria 1903
8 Ga0070691_10001249 3300005341 Bacteria 10721
9 Ga0070687_100189762 3300005343 Bacteria 1238
10 Ga0070692_10107763 3300005345 Bacteria 1537
11 Ga0070692_10183758 3300005345 Bacteria 1214
12 Ga0070701_10004133 3300005438 Bacteria 5834
13 Ga0070701_10045776 3300005438 Bacteria 2246
14 Ga0070705_100018743 3300005440 Bacteria 3632
15 Ga0070700_100067102 3300005441 Bacteria 2279
16 Ga0070708_100086829 3300005445 Bacteria 2842
17 Ga0070678_100042191 3300005456 Bacteria 3241
18 Ga0068867_100016006 3300005459 Bacteria 5325
19 Ga0070685_10004970 3300005466 Bacteria 6734
20 Ga0070706_100005387 3300005467 Bacteria 12191
21 Ga0070706_100008893 3300005467 Bacteria 9352
22 Ga0070706_100056948 3300005467 Bacteria 3606
23 Ga0070707_100000042 3300005468 Bacteria 109324
24 Ga0070698_100004485 3300005471 Bacteria 15351
25 Ga0070698_100012494 3300005471 Bacteria 8991
26 Ga0070698_100112552 3300005471 Bacteria 2687
27 Ga0070698_100113006 3300005471 Bacteria 2681
28 Ga0070698_100158405 3300005471 Bacteria 2209
29 Ga0070699_100002587 3300005518 Bacteria 16216
30 Ga0070699_100017682 3300005518 Bacteria 6122
31 Ga0070699_100146306 3300005518 Bacteria 2088
32 Ga0070679_100050873 3300005530 Bacteria 4127
33 Ga0070679_100148247 3300005530 Bacteria 2324
34 Ga0070684_100222021 3300005535 Bacteria 1724
35 Ga0070697_100154571 3300005536 Bacteria 1936
36 Ga0070697_100254668 3300005536 Bacteria 1502
37 Ga0070695_100007576 3300005545 Bacteria 6429
38 Ga0070695_100043629 3300005545 Bacteria 2852
39 Ga0070696_100044173 3300005546 Bacteria 3085
40 Ga0070696_100065179 3300005546 Bacteria 2553
41 Ga0070696_100241589 3300005546 Bacteria 1362
42 Ga0070693_100144293 3300005547 Bacteria 1502
43 Ga0070665_100004841 3300005548 Bacteria 13987
44 Ga0070704_100119647 3300005549 Bacteria 2020
45 Ga0068855_100133569 3300005563 Bacteria 2832
46 Ga0068859_100009095 3300005617 Bacteria 10030
47 Ga0068864_100033466 3300005618 Bacteria 4369
48 Ga0068864_100104182 3300005618 Bacteria 2520
49 Ga0068864_100142168 3300005618 Bacteria 2166
50 Ga0068863_100353867 3300005841 Bacteria 1431
51 Ga0068863_100354280 3300005841 Bacteria 1430
52 Ga0068858_100002780 3300005842 Bacteria 17591
53 Ga0068862_100072925 3300005844 Bacteria 2966
54 Ga0081538_10006837 3300005981 Bacteria 9941
55 Ga0068871_100190172 3300006358 Bacteria 1768
56 Ga0075428_100016882 3300006844 Bacteria 8062
57 Ga0075431_100001570 3300006847 Bacteria 21223
58 Ga0075431_100095551 3300006847 Bacteria 3068
59 Ga0075433_10008199 3300006852 Bacteria 8324
60 Ga0075433_10011707 3300006852 Bacteria 7065
61 Ga0075433_10023566 3300006852 Bacteria 5183
62 Ga0075433_10033828 3300006852 Bacteria 4384
63 Ga0075433_10047915 3300006852 Bacteria 3717
64 Ga0075433_10086707 3300006852 Bacteria 2764
65 Ga0075433_10318558 3300006852 Bacteria 1376
66 Ga0075434_100004140 3300006871 Bacteria 12995
67 Ga0075434_100017070 3300006871 Bacteria 6985
68 Ga0075434_100021914 3300006871 Bacteria 6219
69 Ga0075434_100030450 3300006871 Bacteria 5313
70 Ga0075429_100055693 3300006880 Bacteria 3441
71 Ga0075429_100056907 3300006880 Bacteria 3403
72 Ga0075429_100155934 3300006880 Bacteria 1999
73 Ga0068865_100014984 3300006881 Bacteria 4937
74 Ga0068865_100180283 3300006881 Bacteria 1626
75 Ga0075436_100006404 3300006914 Bacteria 8068
76 Ga0075436_100009256 3300006914 Bacteria 6740
77 Ga0097620_100009095 3300006931 Bacteria 10030
78 Ga0075435_100012781 3300007076 Bacteria 6220
79 Ga0075435_100018813 3300007076 Bacteria 5262
80 Ga0075435_100041117 3300007076 Bacteria 3694
81 Ga0111539_10000623 3300009094 Bacteria 45950
82 Ga0111539_10011762 3300009094 Bacteria 10974
83 Ga0105245_10000036 3300009098 Bacteria 147150
84 Ga0105245_10140873 3300009098 Bacteria 2271
85 Ga0114129_10121455 3300009147 Bacteria 3595
86 Ga0114129_10317553 3300009147 Bacteria 2072
87 Ga0114129_10382906 3300009147 Bacteria 1857
88 Ga0105243_10114573 3300009148 Bacteria 2262
89 Ga0105243_10300814 3300009148 Bacteria 1454
90 Ga0105242_10004722 3300009176 Bacteria 10548
91 Ga0105242_10129226 3300009176 Bacteria 2178
92 Ga0105248_10011818 3300009177 Bacteria 9631
93 Ga0105249_10024413 3300009553 Bacteria 5433
94 Ga0105249_10123309 3300009553 Bacteria 2465
95 Ga0157371_10005474 3300013102 Bacteria 10701
96 Ga0157369_10016346 3300013105 Bacteria 8351
97 Ga0157378_10229166 3300013297 Bacteria 1769
98 Ga0157372_10430220 3300013307 Bacteria 1538
99 Ga0157379_10003959 3300014968 Bacteria 12630
100 Ga0209025_1033230 3300025294 Bacteria 2389
101 Ga0207684_10003479 3300025910 Bacteria 15359
102 Ga0207684_10082565 3300025910 Bacteria 2737
103 Ga0207707_10416668 3300025912 Bacteria 1152
104 Ga0207660_10097647 3300025917 Bacteria 2189
105 Ga0207652_10024239 3300025921 Bacteria 5032
106 Ga0207646_10000030 3300025922 Bacteria 219473
107 Ga0207646_10167620 3300025922 Bacteria 1983
108 Ga0207687_10000044 3300025927 Bacteria 100713
109 Ga0207687_10163062 3300025927 Bacteria 1712
110 Ga0207709_10039595 3300025935 Bacteria 2816
111 Ga0207670_10005843 3300025936 Bacteria 6792
112 Ga0207670_10112404 3300025936 Bacteria 1965
113 Ga0207670_10146671 3300025936 Bacteria 1746
114 Ga0207711_10145606 3300025941 Bacteria 2134
115 Ga0207689_10012047 3300025942 Bacteria 7410
116 Ga0207689_10022994 3300025942 Bacteria 5236
117 Ga0207661_10295092 3300025944 Bacteria 1452
118 Ga0207712_10012024 3300025961 Bacteria 5524
119 Ga0207712_10074917 3300025961 Bacteria 2445
120 Ga0207712_10121222 3300025961 Bacteria 1979
121 Ga0207677_10160367 3300026023 Bacteria 1747
122 Ga0207703_10003889 3300026035 Bacteria 12402
123 Ga0207708_10061589 3300026075 Bacteria 2865
124 Ga0207641_10037092 3300026088 Bacteria 4070
125 Ga0207676_10041839 3300026095 Bacteria 3520
126 Ga0207676_10061402 3300026095 Bacteria 2976
127 Ga0207676_10320265 3300026095 Bacteria 1423
128 Ga0207674_10196088 3300026116 Bacteria 1969
129 Ga0207675_100030086 3300026118 Bacteria 5056
130 Ga0207683_10039749 3300026121 Bacteria 4104
131 Ga0207428_10000063 3300027907 Bacteria 151868
132 Ga0207428_10000091 3300027907 Bacteria 125388
133 Ga0207428_10023326 3300027907 Bacteria 5205
134 Ga0207428_10045658 3300027907 Bacteria 3527
135 Ga0268266_10001647 3300028379 Bacteria 25873
136 Ga0268265_10062003 3300028380 Bacteria 2872
137 Ga0265323_10000338 3300028653 Bacteria 26777
138 Ga0265323_10000809 3300028653 Bacteria 16798
139 Ga0265322_10000032 3300028654 Bacteria 81879
140 Ga0265322_10001087 3300028654 Bacteria 9402
141 Ga0265322_10018344 3300028654 Bacteria 2012
142 Ga0307515_10013765 3300028794 Bacteria 15074
143 Ga0265338_10085527 3300028800 Bacteria 2628
144 Ga0265320_10054987 3300031240 Bacteria 1918
145 Ga0265316_10001659 3300031344 Bacteria 23685
146 Ga0265316_10022120 3300031344 Bacteria 5371
147 Ga0307513_10008781 3300031456 Bacteria 12870
148 Ga0307509_10000037 3300031507 Bacteria 188517
149 Ga0307509_10005960 3300031507 Bacteria 16665
150 Ga0307509_10041353 3300031507 Bacteria 5002
151 Ga0307408_100011520 3300031548 Bacteria 5842
152 Ga0307508_10010636 3300031616 Bacteria 8413
153 Ga0316576_10005655 3300031727 Bacteria 7680
154 Ga0307516_10011492 3300031730 Bacteria 9616
155 Ga0307516_10016378 3300031730 Bacteria 7754
156 Ga0316577_10113820 3300031733 Bacteria 1518
157 Ga0307406_10020590 3300031901 Bacteria 3887
158 Ga0307406_10062530 3300031901 Bacteria 2409
159 Ga0307406_10166080 3300031901 Bacteria 1592
160 Ga0307416_100003847 3300032002 Bacteria 8930
161 Ga0307411_10018812 3300032005 Bacteria 3974
162 Ga0307415_100009139 3300032126 Bacteria 5537
163 Ga0316593_10015327 3300032168 Bacteria 2304
164 Ga0373949_0001963 3300035090 Bacteria 5506
165 Ga0373936_0000033 3300035113 Bacteria 112284
166 Ga0373956_0026056 3300035119 Bacteria 2531
167 Ga0373961_0000033 3300035241 Bacteria 86848
168 Ga0373937_0337155 3300036401 Bacteria 1428
169 Ga0316582_0025032 3300036647 Bacteria 3578
170 Ga0316584_0150644 3300036712 Bacteria 1732
171 Ga0395899_0066346 3300037312 Bacteria 2650
172 Ga0395899_0107362 3300037312 Bacteria 2009
173 Ga0395900_0273782 3300037418 Bacteria 1682
174 Ga0395900_0358767 3300037418 Bacteria 1429
175 Ga0395898_0001814 3300037466 Bacteria 27572
176 Ga0395898_0083249 3300037466 Bacteria 3084
177 Ga0395905_0193416 3300037471 Bacteria 1908
178 Ga0316581_0042215 3300037588 Bacteria 1392
179 Ga0395901_0000711 3300038443 Bacteria 38066
180 Ga0400483_027157 3300039062 Bacteria 7889
181 Ga0400483_163860 3300039062 Bacteria 5074
182 Ga0400483_198999 3300039062 Bacteria 4230
183 Ga0451577_0016561 3300042876 Bacteria 6821
184 Ga0451577_0113400 3300042876 Bacteria 2426
185 Ga0451577_0124223 3300042876 Bacteria 2312
186 Ga0453683_0020481 3300044673 Bacteria 4226
187 Ga0453684_0000058 3300044712 Archaea 503665
188 Ga0453684_0033570 3300044712 Bacteria 7150
189 Ga0453684_0041840 3300044712 Bacteria 6187
190 Ga0453684_0150020 3300044712 Bacteria 2772
191 Ga0453684_0425651 3300044712 Bacteria 1482
192 Ga0451576_0013165 3300045051 Bacteria 9257
193 Ga0451576_0018552 3300045051 Bacteria 7621
194 Ga0495582_0007237 3300046473 Bacteria 6154
195 Ga0495659_0000274 3300046664 Bacteria 20995
196 Ga0495588_0024128 3300046674 Bacteria 3019
197 Ga0495658_0020617 3300046683 Bacteria 3462
198 Ga0495658_0025104 3300046683 Bacteria 3183
199 Ga0495649_0067656 3300046694 Bacteria 1916
200 Ga0495676_0152609 3300047321 Bacteria 1642
201 Ga0495686_0046917 3300047472 Bacteria 2729
202 Ga0496116_0000042 3300048919 Bacteria 330516
203 Ga0496117_0046420 3300048920 Bacteria 3125
204 Ga0496119_0075076 3300048922 Bacteria 1966
205 Ga0496122_0001703 3300048925 Bacteria 34083
206 Ga0496124_0190604 3300048927 Bacteria 1569
207 Ga0496125_0248289 3300048928 Bacteria 1125
208 Ga0496126_0000053 3300048929 Bacteria 311989
209 Ga0501299_022278 3300049522 Bacteria 1168
210 Ga0501036_0124410 3300049572 Bacteria 2178
211 Ga0501037_0242961 3300049573 Bacteria 1262
212 Ga0501038_0313021 3300049574 Bacteria 1230
213 Ga0501040_0073602 3300049576 Bacteria 2361
214 Ga0501046_0170339 3300049580 Bacteria 1635
215 Ga0501047_0042340 3300049581 Bacteria 4401
216 Ga0501069_0014961 3300049585 Bacteria 4156
217 Ga0501070_0007607 3300049586 Bacteria 9200
218 Ga0501072_0031585 3300049588 Bacteria 4147
219 Ga0501074_0253375 3300049590 Bacteria 1252
220 Ga0501075_0099968 3300049591 Bacteria 2203
221 Ga0501076_0148436 3300049592 Bacteria 1907
222 Ga0501227_001898 3300049665 Bacteria 4634
223 Ga0501230_005929 3300049667 Bacteria 1751
224 Ga0501229_018589 3300049706 Bacteria 912
225 Ga0501234_018493 3300049707 Bacteria 1103
226 Ga0501080_0191878 3300049742 Bacteria 1877
227 Ga0501081_0159946 3300049743 Bacteria 1622
228 Ga0501035_0000080 3300049822 Bacteria 117877
229 Ga0501035_0155275 3300049822 Bacteria 1984
230 Ga0501044_0056575 3300049823 Bacteria 4027
231 Ga0501045_0208067 3300049824 Bacteria 1457
232 nmdc:mga05p37_103757_c1 3300050507 Bacteria 3499
233 nmdc:mga09592_11341_c1 3300050508 Bacteria 7247
234 nmdc:mga0qj67_152001_c1 3300050509 Bacteria 1878
235 nmdc:mga0qj67_236753_c1 3300050509 Bacteria 1481
236 nmdc:mga0qj67_56758_c1 3300050509 Bacteria 3104
237 nmdc:mga06r32_241530_c1 3300050510 Bacteria 1794
238 nmdc:mga06r32_83163_c1 3300050510 Bacteria 3119
239 nmdc:mga08y16_1693_c1 3300050511 Bacteria 22366
240 nmdc:mga08y16_34473_c1 3300050511 Bacteria 5317
241 nmdc:mga0n895_10825_c1 3300050512 Bacteria 8095
242 nmdc:mga0n895_10826_c1 3300050512 Bacteria 8095
243 nmdc:mga0n895_12752_c1 3300050512 Bacteria 7548
244 nmdc:mga0n895_180865_c1 3300050512 Bacteria 2140
245 nmdc:mga0n895_29731_c1 3300050512 Bacteria 5214
246 nmdc:mga0n895_40560_c1 3300050512 Bacteria 4522
247 nmdc:mga0rr50_104695_c1 3300050513 Bacteria 2229
248 nmdc:mga0rr50_27560_c1 3300050513 Bacteria 3980
249 nmdc:mga0rr50_8319_c1 3300050513 Bacteria 6455
250 nmdc:mga08x19_4372_c1 3300050514 Bacteria 8380
251 nmdc:mga0a205_1593_c1 3300050515 Bacteria 19482
252 nmdc:mga0a205_18252_c1 3300050515 Bacteria 6591
253 nmdc:mga0a205_305197_c1 3300050515 Bacteria 1464
254 nmdc:mga0a205_36801_c1 3300050515 Bacteria 4705
255 nmdc:mga0a205_40_c1 3300050515 Bacteria 71613
256 nmdc:mga0a205_58399_c1 3300050515 Bacteria 3726
257 nmdc:mga0a205_7095_c2 3300050515 Bacteria 7726
258 Ga0500566_0003993 3300053094 Bacteria 8807
259 Ga0500640_018386 3300053095 Bacteria 2979
260 Ga0500555_000014 3300053103 Bacteria 233611
261 Ga0500595_001111 3300053119 Bacteria 14942
262 Ga0500603_002397 3300053150 Bacteria 4114
263 Ga0500616_0015515 3300053153 Bacteria 4354
264 Ga0500636_0098443 3300053177 Bacteria 1666
265 Ga0501082_0166476 3300060353 Bacteria 1916
266 Ga0501082_0289426 3300060353 Bacteria 1426
267 Ga0530510_0036205 3300061734 Bacteria 3557
268 Ga0530510_0123927 3300061734 Bacteria 1899
269 2643857100 2643221568 Bacteria 5187270
270 2793283844 2791355253 Bacteria 5171699
271 2916183097 2916178963 Bacteria 5265078
272 2919170232 2919166419 Bacteria 4952238
273 2978970131 2978969890 Bacteria 5400756
274 2984587160 2984587000 Bacteria 5263363
275 Ga0070688_100074819
276 Ga0065715_10187968
277 Ga0065707_10089602
278 Ga0068869_100042039
279 Ga0068869_100068214
280 Ga0070689_100002252
281 Ga0070689_100146423
282 Ga0070691_10001249
283 Ga0070687_100189762
284 Ga0070692_10107763
285 Ga0070692_10183758
286 Ga0070701_10004133
287 Ga0070701_10045776
288 Ga0070705_100018743
289 Ga0070700_100067102
290 Ga0070708_100086829
291 Ga0070678_100042191
292 Ga0068867_100016006
293 Ga0070685_10004970
294 Ga0070706_100005387
295 Ga0070706_100008893
296 Ga0070706_100056948
297 Ga0070707_100000042
298 Ga0070698_100004485
299 Ga0070698_100012494
300 Ga0070698_100112552
301 Ga0070698_100113006
302 Ga0070698_100158405
303 Ga0070699_100002587
304 Ga0070699_100017682
305 Ga0070699_100146306
306 Ga0070679_100050873
307 Ga0070679_100148247
308 Ga0070684_100222021
309 Ga0070697_100154571
310 Ga0070697_100254668
311 Ga0070695_100007576
312 Ga0070695_100043629
313 Ga0070696_100044173
314 Ga0070696_100065179
315 Ga0070696_100241589
316 Ga0070693_100144293
317 Ga0070665_100004841
318 Ga0070704_100119647
319 Ga0068855_100133569
320 Ga0068859_100009095
321 Ga0068864_100033466
322 Ga0068864_100104182
323 Ga0068864_100142168
324 Ga0068863_100353867
325 Ga0068863_100354280
326 Ga0068858_100002780
327 Ga0068862_100072925
328 Ga0081538_10006837
329 Ga0068871_100190172
330 Ga0075428_100016882
331 Ga0075431_100001570
332 Ga0075431_100095551
333 Ga0075433_10008199
334 Ga0075433_10011707
335 Ga0075433_10023566
336 Ga0075433_10033828
337 Ga0075433_10047915
338 Ga0075433_10086707
339 Ga0075433_10318558
340 Ga0075434_100004140
341 Ga0075434_100017070
342 Ga0075434_100021914
343 Ga0075434_100030450
344 Ga0075429_100055693
345 Ga0075429_100056907
346 Ga0075429_100155934
347 Ga0068865_100014984
348 Ga0068865_100180283
349 Ga0075436_100006404
350 Ga0075436_100009256
351 Ga0097620_100009095
352 Ga0075435_100012781
353 Ga0075435_100018813
354 Ga0075435_100041117
355 Ga0111539_10000623
356 Ga0111539_10011762
357 Ga0105245_10000036
358 Ga0105245_10140873
359 Ga0114129_10121455
360 Ga0114129_10317553
361 Ga0114129_10382906
362 Ga0105243_10114573
363 Ga0105243_10300814
364 Ga0105242_10004722
365 Ga0105242_10129226
366 Ga0105248_10011818
367 Ga0105249_10024413
368 Ga0105249_10123309
369 Ga0157371_10005474
370 Ga0157369_10016346
371 Ga0157378_10229166
372 Ga0157372_10430220
373 Ga0157379_10003959
374 Ga0209025_1033230
375 Ga0207684_10003479
376 Ga0207684_10082565
377 Ga0207707_10416668
378 Ga0207660_10097647
379 Ga0207652_10024239
380 Ga0207646_10000030
381 Ga0207646_10167620
382 Ga0207687_10000044
383 Ga0207687_10163062
384 Ga0207709_10039595
385 Ga0207670_10005843
386 Ga0207670_10112404
387 Ga0207670_10146671
388 Ga0207711_10145606
389 Ga0207689_10012047
390 Ga0207689_10022994
391 Ga0207661_10295092
392 Ga0207712_10012024
393 Ga0207712_10074917
394 Ga0207712_10121222
395 Ga0207677_10160367
396 Ga0207703_10003889
397 Ga0207708_10061589
398 Ga0207641_10037092
399 Ga0207676_10041839
400 Ga0207676_10061402
401 Ga0207676_10320265
402 Ga0207674_10196088
403 Ga0207675_100030086
404 Ga0207683_10039749
405 Ga0207428_10000063
406 Ga0207428_10000091
407 Ga0207428_10023326
408 Ga0207428_10045658
409 Ga0268266_10001647
410 Ga0268265_10062003
411 Ga0265323_10000338
412 Ga0265323_10000809
413 Ga0265322_10000032
414 Ga0265322_10001087
415 Ga0265322_10018344
416 Ga0307515_10013765
417 Ga0265338_10085527
418 Ga0265320_10054987
419 Ga0265316_10001659
420 Ga0265316_10022120
421 Ga0307513_10008781
422 Ga0307509_10000037
423 Ga0307509_10005960
424 Ga0307509_10041353
425 Ga0307408_100011520
426 Ga0307508_10010636
427 Ga0316576_10005655
428 Ga0307516_10011492
429 Ga0307516_10016378
430 Ga0316577_10113820
431 Ga0307406_10020590
432 Ga0307406_10062530
433 Ga0307406_10166080
434 Ga0307416_100003847
435 Ga0307411_10018812
436 Ga0307415_100009139
437 Ga0316593_10015327
438 Ga0373949_0001963
439 Ga0373936_0000033
440 Ga0373956_0026056
441 Ga0373961_0000033
442 Ga0373937_0337155
443 Ga0316582_0025032
444 Ga0316584_0150644
445 Ga0395899_0066346
446 Ga0395899_0107362
447 Ga0395900_0273782
448 Ga0395900_0358767
449 Ga0395898_0001814
450 Ga0395898_0083249
451 Ga0395905_0193416
452 Ga0316581_0042215
453 Ga0395901_0000711
454 Ga0400483_027157
455 Ga0400483_163860
456 Ga0400483_198999
457 Ga0451577_0016561
458 Ga0451577_0113400
459 Ga0451577_0124223
460 Ga0453683_0020481
461 Ga0453684_0000058
462 Ga0453684_0033570
463 Ga0453684_0041840
464 Ga0453684_0150020
465 Ga0453684_0425651
466 Ga0451576_0013165
467 Ga0451576_0018552
468 Ga0495582_0007237
469 Ga0495659_0000274
470 Ga0495588_0024128
471 Ga0495658_0020617
472 Ga0495658_0025104
473 Ga0495649_0067656
474 Ga0495676_0152609
475 Ga0495686_0046917
476 Ga0496116_0000042
477 Ga0496117_0046420
478 Ga0496119_0075076
479 Ga0496122_0001703
480 Ga0496124_0190604
481 Ga0496125_0248289
482 Ga0496126_0000053
483 Ga0501299_022278
484 Ga0501036_0124410
485 Ga0501037_0242961
486 Ga0501038_0313021
487 Ga0501040_0073602
488 Ga0501046_0170339
489 Ga0501047_0042340
490 Ga0501069_0014961
491 Ga0501070_0007607
492 Ga0501072_0031585
493 Ga0501074_0253375
494 Ga0501075_0099968
495 Ga0501076_0148436
496 Ga0501227_001898
497 Ga0501230_005929
498 Ga0501229_018589
499 Ga0501234_018493
500 Ga0501080_0191878
501 Ga0501081_0159946
502 Ga0501035_0000080
503 Ga0501035_0155275
504 Ga0501044_0056575
505 Ga0501045_0208067
506 nmdc:mga05p37_103757_c1
507 nmdc:mga09592_11341_c1
508 nmdc:mga0qj67_152001_c1
509 nmdc:mga0qj67_236753_c1
510 nmdc:mga0qj67_56758_c1
511 nmdc:mga06r32_241530_c1
512 nmdc:mga06r32_83163_c1
513 nmdc:mga08y16_1693_c1
514 nmdc:mga08y16_34473_c1
515 nmdc:mga0n895_10825_c1
516 nmdc:mga0n895_10826_c1
517 nmdc:mga0n895_12752_c1
518 nmdc:mga0n895_180865_c1
519 nmdc:mga0n895_29731_c1
520 nmdc:mga0n895_40560_c1
521 nmdc:mga0rr50_104695_c1
522 nmdc:mga0rr50_27560_c1
523 nmdc:mga0rr50_8319_c1
524 nmdc:mga08x19_4372_c1
525 nmdc:mga0a205_1593_c1
526 nmdc:mga0a205_18252_c1
527 nmdc:mga0a205_305197_c1
528 nmdc:mga0a205_36801_c1
529 nmdc:mga0a205_40_c1
530 nmdc:mga0a205_58399_c1
531 nmdc:mga0a205_7095_c2
532 Ga0500566_0003993
533 Ga0500640_018386
534 Ga0500555_000014
535 Ga0500595_001111
536 Ga0500603_002397
537 Ga0500616_0015515
538 Ga0500636_0098443
539 Ga0501082_0166476
540 Ga0501082_0289426
541 Ga0530510_0036205
542 Ga0530510_0123927
543 2643857100
544 2793283844
545 2916183097
546 2919170232
547 2978970131
548 2984587160

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07726

AAA_3

ATPase family associated with various cellular activities (AAA)

86

216

1

PF17863

AAA_lid_2

AAA lid domain

288

360

0.94

PF07728

AAA_5

AAA domain (dynein-related subfamily)

86

214

0.91

PF00158

Sigma54_activat

Sigma-54 interaction domain

72

204

0.84

PF20030

bpMoxR

MoxR domain in the MoxR-vWA-beta-propeller ternary systems

52

260

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.9243 7 329
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.9027 7 329
3nbx-assembly1.cif.gz_X crystal structure of e. coli rava (regulatory atpase variant a) in complex with adp 0.8221 13 323
4upb-assembly1.cif.gz_E electron cryo-microscopy of the complex formed between the hexameric atpase rava and the decameric inducible decarboxylase ldci 0.8178 13 323
4upb-assembly1.cif.gz_C electron cryo-microscopy of the complex formed between the hexameric atpase rava and the decameric inducible decarboxylase ldci 0.8091 13 318
ID Description Score Start End Superfamily
af_Q79FN7_233_349_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9858 213 326 1.10.8.80
af_O53314_205_312_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9741 211 325 1.10.8.80
2r44A03 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9721 210 326 1.10.8.80
af_I6YGX9_248_354_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9693 221 324 1.10.8.80
af_Q79FN7_37_232_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.964 15 213 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7X5N5M0-F1-model_v4 AAA family ATPase 1.001 78 150 GO:0005524
GO:0016887
AF-A0A2W5EJ89-F1-model_v4 deleted 0.9914 216 329
AF-A0A5M5C759-F1-model_v4 AAA domain-containing protein 0.9887 17 150 GO:0005524
GO:0016887
AF-A0A7W0WMD8-F1-model_v4 AAA family ATPase 0.9886 25 264 GO:0005524
GO:0016887
AF-A0A7C0WSE7-F1-model_v4 AAA family ATPase 0.9877 20 158 GO:0005524
GO:0016887

Map