Scaffold Information

Sample ID 3300005329
Scaffold Ga0070683_100000002
Sample Name Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG
Length 427530
Fam Num 47
Taxonomy Bacteria
Environment Rhizosphere
Lineage Bacteria;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. 200

CRISPR Details

Start Coordinate: 300776 End Coordinate: 306895
Position Repeat Spacer
300776 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GAGCGGCTTGCTGGCGCGGTCGGGTGGGCTTGGATG
300848 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TGGAAGAACGGGCAAGGGCACGATCCCGGAACACGC
300920 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CGCATCCCGTTCCAGAAGACGTACGGCGGACGCGTCG
300993 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CCGAGATTGCCGATGAGGATGGCCTTGTTGACAGA
301064 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC AATATACACGCGTTGCCCCATCACTCTGCCCAAAT
301135 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GCGCGAGAGGAAGATCGACGGGCACGGGATCGTCCAG
301208 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CATAGTGTTACTCTCCGTCTCGTACTCCCTGAACGCC
301281 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC ACGAGAGCCTCCAGGAAGAGGCGCACGAACTTGACGC
301354 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CCCGGCAATCCGCCGCTGCCCCACACTCGCGACGGTAC
301428 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GGCGCGATGCATCCACAGGTGCTCCGAGTCAACGGC
301500 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TGGTCTGTCGTCGAGACCCGGGCGTAGATGGCGCAC
301572 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC AAGTGAAATGACCTCGCGGCGGTGTTTGGAAAAGTT
301644 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CGAATGTCCCGCAAGATCAAGGCAGCAGATTGCAGC
301716 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CATGTAGTTCGCCGAATTCGCTTGCGAGGAGGCGTGG
301789 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CAACAAGCGGCAGGAGGAAGAGCGCGCGCACGCCATC
301862 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GCGTCCCGCGCGAGCCATCCACATACAGACACCGCAC
301935 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GAGATAAGTAACCCTTTAATACAACATGAAAGTTGGT
302008 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CGGGATACCGGCGTAGGCTTCGACCAGCGTCCCAAC
302080 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC AAAATCTGTCGCGCGCTCATCAGCTCTCCGCGCTCGC
302153 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GCGTATTGCGTAACCGTGGCCGCGTCCGTGTCCAC
302224 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC ATGGACCACCGCATCCGGTTCGCTCTCAGTCAAGGGACGT
302300 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TTCGTAACGGGCTGTAGTTCTGGTTGGTCGTCTGG
302371 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CCCTTGATCCGCGCTCGGTCGGACCGCAGCTGCTCAA
302444 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CGTGGACGGGGAAATCACGATCACCTGGGATGCTCCGT
302518 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CATGATGGACTTGACGCTATCCTTTGCCATCTCAT
302589 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CCTTCACTTTGAGCGTGACCTCGACCGACTGCACGCCGT
302664 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GTGGCGGCGGCGGAGGAGACGGGGAAGGCGATGGT
302735 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GATCCGCCGCCGCGATTTCCCCTGCCGCTATGCCGAG
302808 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GAGTTGAGCGAGTCCGCACCTGCACATGCCGTGGA
302879 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GGCGCGGTCCGCAATGGCCGGGTGAGCGAGGCGCAAC
302952 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CGGGGGCCGGTGCGGCCGCCGGTGGTGACGGCGCC
303023 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GGAACCAGATCGAGGAAGCCCTCGGCGTGGCGGCCA
303095 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GTGAAGTGACCGGGGTTGATGCTGGGGTTGATGTT
303166 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC ATTTGCAGTCGGCGGGTATAAGGCCGCCCGACCAGCCC
303240 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CGAAAGACTGAGCAGTTGACGCCCTCCTGCCCGTC
303311 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TTTTAATCCTTCCGGTTTTCATGTCTGCGTCGCCCTG
303384 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TTTAAAAACACCCGAGAGTGAGCCTCGCGTATAGG
303455 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CAGCAACTGCCTGCTATCCAAGTGGGGCTTTCACGA
303527 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GGGAGGTCCGAGGTGGTCATCGAACCCGCGAAGTAC
303599 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CGGACGTCCTGAAGCGCCAAGCCTTCTCCCTTCGA
303670 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CCGAGTTTGCAGTACGTCGACGTGGGCGCGGATCGG
303742 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GTCAATCAACGCTTCAATCACTTCACTGGTGACTG
303813 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GGTCCGTTCGAAGGTCAGCACGTGGAGGCAGTGATGA
303886 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GTGGTGATCGAGTTGCCGATACCGACGTCGCCGGAC
303958 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GAAGTGGACGTGCCGACGGCGAACTATGCGGGCCAG
304030 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GTGCAGGGCGCCAGCTGTGGCGACGCGATGGAAGTG
304102 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CGGTTTCAGCAGCAGCCGGCGCGGGAGGCGGGAGCTT
304175 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TCTTCCGGTTGTCCAAGGTCGCGCATGGGTCCACGTG
304248 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TTGCACGGAACCGGCGTTGACGAGGGCCTTTGCGGT
304320 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CGGCGTCAAAGTGCGTCGGGTGCCCTGTAATTCCAG
304392 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GATCCGATCACGAACTCGCTGGTGCCGCAATCGCGGT
304465 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC ATGGTCTGGAGCTTCAACGCCATGAGGGACGCCAT
304536 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC AGGGTCACGCGGAAGATGTTGTCGCCGTCCCGCTCGA
304609 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CAGCCGTGCAACCGGGCTGCGTCCAGGACGTCGTGGT
304682 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TGGGTCTTGATCTCTCTATATCCTGATTCTGCGCCGC
304755 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CTGTGTGACTACGACGTGATCGGCATCGACGTACCC
304827 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GCCACCACAACCCCGACGAACGCGACGGGCTACGTGC
304900 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GCGGCGATCTCGTTAACGACCCCGGCATCCGCGCGCTT
304974 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CGCTACGATCAGTTCCGCCGTGCCGTCCTTTGGGTC
305046 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GAGACAATCGTGCGGAAGCACTACGCCAAATGGAGC
305118 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GGGTCGCTGGCGTCGGCCGCAATGGTCTTGTATGC
305189 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC AAGATAGGACGAGCGATCCCAAAACATAAGTATGCCT
305262 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC AAGTCCGCTTCCCGCACGCGGCGGCAGTAGTCGTTGTC
305336 ATTTCCGCGATCAGCTGATCGCGGCTTCATTGAAGC AGGCGCTGGAGCAGAGTAAGGAGGCGAAATGAGGTT
305408 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TGATCGGCGGCGCGCCCTACCACATGCGCGTGTTGC
305480 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC ACGAATGGCGTTGCGAACGTCATCCACATGTACCCG
305552 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC ATAGACTTATGCCCCAACAGTAGCTGTACGGTCCGG
305624 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GAGTGAAATGACGGTGGGGCGGGTGTTCTTTGGCGG
305696 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GGTACTGGCCGCTGGGCGTGATCGCCGGGGCCACGAC
305769 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TTGAAACCGAGTGGAAGCGCGATCCGAAGCCGCCCG
305841 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TGATCTCTGCGAGTTTCTGCTGAACCGTAGCGCGTA
305913 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GACTATTCGAGGACAAGCATCGTTTATGCGTCGGTG
305985 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GGGTTTGGCGGGGGGACCGGATAACTCAGGTCCCGG
306057 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CTCCGGGCCTGTAAACGTCTGGTCCCTCCTCTCGGA
306129 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CCGCAATCCGGACAGAACTTCCAGGTCACGGCGGT
306200 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC ATGCTCGAACCCCACGCTCCGGCGCCAGCCGGGGAACAG
306275 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC AGTAACTTCCGGTACGCACCGTACCCGGGACCGACGC
306348 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC GACCTGGACTGCGCGCACGGGCGGTATCAGAAGAAT
306420 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC ATCAGGAAGGAGCGCACTTCCGCGTGATGCGTGCCGC
306493 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CTTGTGATGGTGCGATTATGTACCCTCGTACCCGAG
306565 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC CGCGAGTTAGACCGCGCTCTGGCGCACGCCGCCGCA
306637 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC AGTTTCCTGTGTGACCGCGGGCCGGGGTTGGTGCCGGGGC
306713 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TCGTACAGCGGGAGTATGGTCGCGTCGAAGTTGTCGG
306786 ATTTCCGCGATCAGCTGATCGCGGCCTCATTGAAGC TGGCATTCCGCACGGCGTCACTAGCGGCAGCAGCGTA
306859 ATTTCCGCCATCAGCTGATCGCGGCCTCAGCGTGCG -

PFAM Info

PFAM Domain Meaning GOTerms
PF22590 Cas3-like_C_2 CRISPR-associated nuclease/helicase Cas3, C-terminal N/A

Scaffold Families

F250979 , F286323 , F320773 , F330218 , F336547 , F339442 , F345434 , F370400 , F371321 , F374572 , F382929 , F391532 , F398074 , F409287 , F413035 , F413717 , F420437 , F426283 , F427700 , F433547 , F438345 , F438741 , F438815 , F439738 , F440447 , F449176 , F451791 , F454434 , F458757 , F460282 , F465037 , F466268 , F466406 , F473637 , F475214 , F477481 , F480606 , F480925 , F482122 , F483834 , F488574 , F492096 , F493330 , F494701 , F495659 , F496079 , F496943