F286323

General Info

Members Datasets Scaffolds Average Seq Length
186 145 372 280

Family's Representative Sequence

Representative Sequence 3300037068|Ga0373925_0422200|Ga0373925_0422200_121_1056
Length 311
Sequence MANCAARDPGGTISLCGKDACMNHVKLARRFRVEKPKRFRLRRFDPAETAGFSKEAAERIVAKHAPRLTDLQERLYAENRWALLIILQGVDAAGKDGAIKHVMAGLNPQGCIVHPFKVPTAEELDHDYLWRAAARLPPRGDIGIFNRSYYEEVLAVRVHEDLLEKQRLPANLVTKRIWKERFEDINAFERHLVRNGTVVIKFHLRISKGEQKRRLLARLDEPAKRWKFSMADLVERKLWDQYMDAYEDMIRNTSTAEAPWYVLPADHKWFARLVMSTVIIDVLDRLDLEFPKFDRPALRSMKRMRKTLRAE

Samples

Sample ID Description Type Environment
1 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
99 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
100 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
101 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
102 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
103 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
104 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
105 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
106 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
107 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
108 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
111 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
112 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
116 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
117 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
127 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
143 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.69
Nodule 0
Rhizoplane 4.84
Rhizosphere 90.86
Stem 0
Stem Tuber 0
Unclassified 0.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373925_0422200 3300037068 Bacteria 1090
2 JGI25407J50210_10005784 3300003373 Bacteria 3053
3 Ga0065715_10007101 3300005293 Bacteria 6227
4 Ga0070683_100000002 3300005329 Bacteria 427530
5 Ga0070690_100007104 3300005330 Bacteria 6395
6 Ga0070690_100028380 3300005330 Bacteria 3466
7 Ga0070690_100054758 3300005330 Bacteria 2554
8 Ga0070690_100078720 3300005330 Bacteria 2154
9 Ga0070670_100017969 3300005331 Bacteria 6069
10 Ga0070666_10016336 3300005335 Bacteria 4747
11 Ga0070689_100018992 3300005340 Bacteria 5076
12 Ga0070689_100091861 3300005340 Bacteria 2394
13 Ga0070692_10061538 3300005345 Bacteria 1979
14 Ga0070668_100187237 3300005347 Bacteria 1694
15 Ga0070669_100000592 3300005353 Bacteria 26958
16 Ga0070675_100000389 3300005354 Bacteria 29768
17 Ga0070659_100005202 3300005366 Bacteria 9337
18 Ga0070709_10000009 3300005434 Bacteria 178953
19 Ga0070714_100004416 3300005435 Bacteria 10585
20 Ga0070713_100416428 3300005436 Bacteria 1257
21 Ga0070713_100457829 3300005436 Bacteria 1199
22 Ga0070710_10139523 3300005437 Bacteria 1485
23 Ga0070711_100000541 3300005439 Bacteria 19738
24 Ga0070705_100000306 3300005440 Bacteria 28990
25 Ga0070685_10014613 3300005466 Bacteria 4160
26 Ga0070707_100266235 3300005468 Bacteria 1667
27 Ga0070698_100045797 3300005471 Bacteria 4476
28 Ga0070684_100000043 3300005535 Bacteria 87671
29 Ga0070684_100002297 3300005535 Bacteria 14096
30 Ga0070697_100041080 3300005536 Bacteria 3742
31 Ga0070695_100048666 3300005545 Bacteria 2711
32 Ga0070696_100004272 3300005546 Bacteria 9525
33 Ga0070696_100526229 3300005546 Bacteria 944
34 Ga0070704_100049707 3300005549 Bacteria 2943
35 Ga0068856_100197306 3300005614 Bacteria 2027
36 Ga0068861_100000793 3300005719 Bacteria 19034
37 Ga0068863_100017073 3300005841 Bacteria 6960
38 Ga0068858_100045309 3300005842 Bacteria 4075
39 Ga0068860_100390556 3300005843 Bacteria 1375
40 Ga0068862_100001415 3300005844 Bacteria 22222
41 Ga0081455_10003917 3300005937 Bacteria 16949
42 Ga0081538_10001561 3300005981 Bacteria 23482
43 Ga0081539_10059781 3300005985 Bacteria 2096
44 Ga0070717_10056723 3300006028 Bacteria 3237
45 Ga0070717_10231178 3300006028 Bacteria 1628
46 Ga0070717_10371269 3300006028 Bacteria 1282
47 Ga0070715_10002785 3300006163 Bacteria 5439
48 Ga0070712_100000481 3300006175 Bacteria 22814
49 Ga0075362_10011893 3300006177 Bacteria 3439
50 Ga0075367_10033454 3300006178 Bacteria 2963
51 Ga0075428_100223062 3300006844 Bacteria 2035
52 Ga0075430_100134245 3300006846 Bacteria 2062
53 Ga0075431_100032825 3300006847 Bacteria 5350
54 Ga0075433_10109389 3300006852 Bacteria 2452
55 Ga0075434_100000204 3300006871 Bacteria 40084
56 Ga0075434_100101018 3300006871 Bacteria 2890
57 Ga0075436_100019485 3300006914 Bacteria 4650
58 Ga0075435_100092480 3300007076 Bacteria 2498
59 Ga0075435_100128675 3300007076 Bacteria 2118
60 Ga0111539_10027291 3300009094 Bacteria 6973
61 Ga0111539_10248384 3300009094 Bacteria 2072
62 Ga0105245_10017444 3300009098 Bacteria 6263
63 Ga0105247_10001397 3300009101 Bacteria 17518
64 Ga0114129_10021869 3300009147 Bacteria 9078
65 Ga0105243_10000688 3300009148 Bacteria 32874
66 Ga0105242_10008181 3300009176 Bacteria 8034
67 Ga0105242_10126068 3300009176 Bacteria 2204
68 Ga0105248_10001363 3300009177 Bacteria 27273
69 Ga0105248_10124744 3300009177 Bacteria 2905
70 Ga0105237_10001143 3300009545 Bacteria 35677
71 Ga0105238_10527589 3300009551 Bacteria 1184
72 Ga0105249_10036810 3300009553 Bacteria 4440
73 Ga0105249_10097631 3300009553 Bacteria 2758
74 Ga0105249_10119068 3300009553 Bacteria 2507
75 Ga0105249_10159683 3300009553 Bacteria 2177
76 Ga0105249_10555104 3300009553 Bacteria 1200
77 Ga0105239_10015646 3300010375 Bacteria 8398
78 Ga0105239_10529893 3300010375 Bacteria 1340
79 Ga0157371_10002294 3300013102 Bacteria 18437
80 Ga0157369_10006075 3300013105 Bacteria 14017
81 Ga0157369_10039719 3300013105 Bacteria 5142
82 Ga0163162_10009653 3300013306 Bacteria 9384
83 Ga0157372_10009779 3300013307 Bacteria 10199
84 Ga0157375_10100962 3300013308 Bacteria 2967
85 Ga0157377_10000263 3300014745 Bacteria 25807
86 Ga0157379_10017847 3300014968 Bacteria 6252
87 Ga0157376_10000424 3300014969 Bacteria 27368
88 Ga0163161_10013243 3300017792 Bacteria 5732
89 Ga0207653_10012521 3300025885 Bacteria 2649
90 Ga0207692_10116621 3300025898 Bacteria 1489
91 Ga0207680_10038490 3300025903 Bacteria 2768
92 Ga0207699_10000020 3300025906 Bacteria 179154
93 Ga0207699_10001993 3300025906 Bacteria 9657
94 Ga0207705_10138227 3300025909 Bacteria 1817
95 Ga0207693_10000207 3300025915 Bacteria 53977
96 Ga0207693_10022145 3300025915 Bacteria 5052
97 Ga0207663_10013419 3300025916 Bacteria 4453
98 Ga0207660_10033201 3300025917 Bacteria 3568
99 Ga0207662_10007036 3300025918 Bacteria 6109
100 Ga0207662_10080232 3300025918 Bacteria 1990
101 Ga0207646_10353599 3300025922 Bacteria 1328
102 Ga0207681_10000021 3300025923 Bacteria 236982
103 Ga0207681_10018655 3300025923 Bacteria 4373
104 Ga0207694_10065009 3300025924 Bacteria 2844
105 Ga0207650_10103871 3300025925 Bacteria 2191
106 Ga0207659_10000080 3300025926 Bacteria 60332
107 Ga0207700_10055942 3300025928 Bacteria 2967
108 Ga0207664_10065245 3300025929 Bacteria 2914
109 Ga0207690_10013484 3300025932 Bacteria 4912
110 Ga0207670_10025154 3300025936 Bacteria 3733
111 Ga0207670_10058455 3300025936 Bacteria 2619
112 Ga0207665_10000294 3300025939 Bacteria 34482
113 Ga0207661_10000003 3300025944 Bacteria 611941
114 Ga0207667_10054165 3300025949 Bacteria 4219
115 Ga0207712_10075620 3300025961 Bacteria 2435
116 Ga0207712_10080349 3300025961 Bacteria 2371
117 Ga0207712_10468598 3300025961 Bacteria 1071
118 Ga0207639_10026392 3300026041 Bacteria 4221
119 Ga0207641_10009753 3300026088 Bacteria 7909
120 Ga0207674_10000211 3300026116 Bacteria 71986
121 Ga0207675_100000491 3300026118 Bacteria 38393
122 Ga0207428_10085381 3300027907 Bacteria 2458
123 Ga0268266_10054873 3300028379 Bacteria 3425
124 Ga0268265_10000496 3300028380 Bacteria 40862
125 Ga0307508_10019305 3300031616 Bacteria 6198
126 Ga0373929_0057343 3300035085 Bacteria 904
127 Ga0373936_0025071 3300035113 Bacteria 2330
128 Ga0373943_0022847 3300035170 Bacteria 2903
129 Ga0373961_0000512 3300035241 Bacteria 14882
130 Ga0373962_0010968 3300035242 Bacteria 2267
131 Ga0373924_0113907 3300035410 Bacteria 1170
132 Ga0373935_0037882 3300035692 Bacteria 3018
133 Ga0373927_0119965 3300035695 Bacteria 1716
134 Ga0316584_0023129 3300036712 Bacteria 4539
135 Ga0316584_0039953 3300036712 Bacteria 3495
136 Ga0373925_0321519 3300037068 Bacteria 1252
137 Ga0395900_0360146 3300037418 Bacteria 1426
138 Ga0436365_1062494 3300039437 Bacteria 1921
139 Ga0436363_0488265 3300039450 Bacteria 1253
140 Ga0436362_1045987 3300039453 Bacteria 1000
141 Ga0451577_0159331 3300042876 Bacteria 2032
142 Ga0453684_0117067 3300044712 Unclassified 3225
143 Ga0451576_0002919 3300045051 Bacteria 24341
144 Ga0451576_0219161 3300045051 Bacteria 1987
145 Ga0495582_0053327 3300046473 Bacteria 2230
146 Ga0495584_0075051 3300046491 Bacteria 1700
147 Ga0495676_0112975 3300047321 Bacteria 1989
148 Ga0496102_0151876 3300048905 Bacteria 2177
149 Ga0496105_0022378 3300048908 Bacteria 5119
150 Ga0496105_0261923 3300048908 Bacteria 1398
151 Ga0496108_0046008 3300048911 Bacteria 3645
152 Ga0496111_0031884 3300048914 Bacteria 3756
153 Ga0496112_0205204 3300048915 Bacteria 1929
154 Ga0496113_0076911 3300048916 Bacteria 2550
155 Ga0496114_0000024 3300048917 Bacteria 216712
156 Ga0496114_0037438 3300048917 Bacteria 4012
157 Ga0501033_0205390 3300049570 Eukaryota 1406
158 Ga0501067_0038530 3300049583 Bacteria 2653
159 Ga0501068_0038905 3300049584 Bacteria 2850
160 Ga0501068_0274953 3300049584 Bacteria 1076
161 Ga0501072_0108353 3300049588 Bacteria 2210
162 Ga0501075_0006621 3300049591 Bacteria 7985
163 Ga0501077_0000741 3300049593 Bacteria 19755
164 Ga0501080_0001251 3300049742 Bacteria 21158
165 Ga0501080_0637175 3300049742 Bacteria 944
166 Ga0501044_0366216 3300049823 Bacteria 1359
167 nmdc:mga03683_49656_c1 3300050489 Bacteria 1748
168 nmdc:mga05p37_380134_c1 3300050507 Bacteria 1655
169 nmdc:mga0qj67_1484_c1 3300050509 Bacteria 16438
170 nmdc:mga06r32_2993_c1 3300050510 Bacteria 15130
171 nmdc:mga08y16_12448_c1 3300050511 Bacteria 8950
172 nmdc:mga0n895_134_c1 3300050512 Bacteria 44336
173 nmdc:mga0n895_33742_c1 3300050512 Bacteria 4920
174 nmdc:mga0n895_83096_c1 3300050512 Bacteria 3193
175 nmdc:mga0rr50_118792_c1 3300050513 Bacteria 2101
176 nmdc:mga0rr50_215057_c1 3300050513 Bacteria 1585
177 nmdc:mga0rr50_235277_c1 3300050513 Bacteria 1517
178 nmdc:mga0rr50_49328_c1 3300050513 Bacteria 3117
179 nmdc:mga08x19_5567_c1 3300050514 Bacteria 7449
180 nmdc:mga0a205_601_c1 3300050515 Bacteria 28637
181 nmdc:mga0a205_81426_c1 3300050515 Bacteria 3127
182 Ga0500568_0015587 3300053139 Bacteria 3400
183 Ga0500616_0002802 3300053153 Bacteria 14039
184 Ga0501082_0000493 3300060353 Bacteria 34881
185 Ga0501082_0245949 3300060353 Bacteria 1557
186 Ga0530510_0161586 3300061734 Bacteria 1657
187 Ga0373925_0422200
188 JGI25407J50210_10005784
189 Ga0065715_10007101
190 Ga0070683_100000002
191 Ga0070690_100007104
192 Ga0070690_100028380
193 Ga0070690_100054758
194 Ga0070690_100078720
195 Ga0070670_100017969
196 Ga0070666_10016336
197 Ga0070689_100018992
198 Ga0070689_100091861
199 Ga0070692_10061538
200 Ga0070668_100187237
201 Ga0070669_100000592
202 Ga0070675_100000389
203 Ga0070659_100005202
204 Ga0070709_10000009
205 Ga0070714_100004416
206 Ga0070713_100416428
207 Ga0070713_100457829
208 Ga0070710_10139523
209 Ga0070711_100000541
210 Ga0070705_100000306
211 Ga0070685_10014613
212 Ga0070707_100266235
213 Ga0070698_100045797
214 Ga0070684_100000043
215 Ga0070684_100002297
216 Ga0070697_100041080
217 Ga0070695_100048666
218 Ga0070696_100004272
219 Ga0070696_100526229
220 Ga0070704_100049707
221 Ga0068856_100197306
222 Ga0068861_100000793
223 Ga0068863_100017073
224 Ga0068858_100045309
225 Ga0068860_100390556
226 Ga0068862_100001415
227 Ga0081455_10003917
228 Ga0081538_10001561
229 Ga0081539_10059781
230 Ga0070717_10056723
231 Ga0070717_10231178
232 Ga0070717_10371269
233 Ga0070715_10002785
234 Ga0070712_100000481
235 Ga0075362_10011893
236 Ga0075367_10033454
237 Ga0075428_100223062
238 Ga0075430_100134245
239 Ga0075431_100032825
240 Ga0075433_10109389
241 Ga0075434_100000204
242 Ga0075434_100101018
243 Ga0075436_100019485
244 Ga0075435_100092480
245 Ga0075435_100128675
246 Ga0111539_10027291
247 Ga0111539_10248384
248 Ga0105245_10017444
249 Ga0105247_10001397
250 Ga0114129_10021869
251 Ga0105243_10000688
252 Ga0105242_10008181
253 Ga0105242_10126068
254 Ga0105248_10001363
255 Ga0105248_10124744
256 Ga0105237_10001143
257 Ga0105238_10527589
258 Ga0105249_10036810
259 Ga0105249_10097631
260 Ga0105249_10119068
261 Ga0105249_10159683
262 Ga0105249_10555104
263 Ga0105239_10015646
264 Ga0105239_10529893
265 Ga0157371_10002294
266 Ga0157369_10006075
267 Ga0157369_10039719
268 Ga0163162_10009653
269 Ga0157372_10009779
270 Ga0157375_10100962
271 Ga0157377_10000263
272 Ga0157379_10017847
273 Ga0157376_10000424
274 Ga0163161_10013243
275 Ga0207653_10012521
276 Ga0207692_10116621
277 Ga0207680_10038490
278 Ga0207699_10000020
279 Ga0207699_10001993
280 Ga0207705_10138227
281 Ga0207693_10000207
282 Ga0207693_10022145
283 Ga0207663_10013419
284 Ga0207660_10033201
285 Ga0207662_10007036
286 Ga0207662_10080232
287 Ga0207646_10353599
288 Ga0207681_10000021
289 Ga0207681_10018655
290 Ga0207694_10065009
291 Ga0207650_10103871
292 Ga0207659_10000080
293 Ga0207700_10055942
294 Ga0207664_10065245
295 Ga0207690_10013484
296 Ga0207670_10025154
297 Ga0207670_10058455
298 Ga0207665_10000294
299 Ga0207661_10000003
300 Ga0207667_10054165
301 Ga0207712_10075620
302 Ga0207712_10080349
303 Ga0207712_10468598
304 Ga0207639_10026392
305 Ga0207641_10009753
306 Ga0207674_10000211
307 Ga0207675_100000491
308 Ga0207428_10085381
309 Ga0268266_10054873
310 Ga0268265_10000496
311 Ga0307508_10019305
312 Ga0373929_0057343
313 Ga0373936_0025071
314 Ga0373943_0022847
315 Ga0373961_0000512
316 Ga0373962_0010968
317 Ga0373924_0113907
318 Ga0373935_0037882
319 Ga0373927_0119965
320 Ga0316584_0023129
321 Ga0316584_0039953
322 Ga0373925_0321519
323 Ga0395900_0360146
324 Ga0436365_1062494
325 Ga0436363_0488265
326 Ga0436362_1045987
327 Ga0451577_0159331
328 Ga0453684_0117067
329 Ga0451576_0002919
330 Ga0451576_0219161
331 Ga0495582_0053327
332 Ga0495584_0075051
333 Ga0495676_0112975
334 Ga0496102_0151876
335 Ga0496105_0022378
336 Ga0496105_0261923
337 Ga0496108_0046008
338 Ga0496111_0031884
339 Ga0496112_0205204
340 Ga0496113_0076911
341 Ga0496114_0000024
342 Ga0496114_0037438
343 Ga0501033_0205390
344 Ga0501067_0038530
345 Ga0501068_0038905
346 Ga0501068_0274953
347 Ga0501072_0108353
348 Ga0501075_0006621
349 Ga0501077_0000741
350 Ga0501080_0001251
351 Ga0501080_0637175
352 Ga0501044_0366216
353 nmdc:mga03683_49656_c1
354 nmdc:mga05p37_380134_c1
355 nmdc:mga0qj67_1484_c1
356 nmdc:mga06r32_2993_c1
357 nmdc:mga08y16_12448_c1
358 nmdc:mga0n895_134_c1
359 nmdc:mga0n895_33742_c1
360 nmdc:mga0n895_83096_c1
361 nmdc:mga0rr50_118792_c1
362 nmdc:mga0rr50_215057_c1
363 nmdc:mga0rr50_235277_c1
364 nmdc:mga0rr50_49328_c1
365 nmdc:mga08x19_5567_c1
366 nmdc:mga0a205_601_c1
367 nmdc:mga0a205_81426_c1
368 Ga0500568_0015587
369 Ga0500616_0002802
370 Ga0501082_0000493
371 Ga0501082_0245949
372 Ga0530510_0161586

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03976

PPK2

Polyphosphate kinase 2 (PPK2)

51

291

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5o6k-assembly1.cif.gz_D structure of polyphosphate kinase from meiothermus ruber n121d 0.9536 10 280
7bmm-assembly2.cif.gz_C crystal structure of polyphosphate kinase 2 from deinococcus radiodurans in apo form 0.9522 5 282
5o6m-assembly1.cif.gz_A structure of polyphosphate kinase from meiothermus ruber n121d bound to atp 0.9513 10 280
5lcd-assembly1.cif.gz_A structure of polyphosphate kinase from meiothermus ruber bound to amp 0.9513 10 280
5o6m-assembly1.cif.gz_C structure of polyphosphate kinase from meiothermus ruber n121d bound to atp 0.9491 10 280
ID Description Score Start End Superfamily
6aqeA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9713 5 282 3.40.50.300
5ldbC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9481 7 280 3.40.50.300
6aqeA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9354 5 282 3.40.50.300
3czpB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9306 36 273 3.40.50.300
6angA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9293 3 299 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2V7MJT5-F1-model_v4 Polyphosphate kinase 2 0.9934 166 280 GO:0016301
AF-A0A7T0NXA0-F1-model_v4 Polyphosphate kinase 2 family protein 0.9855 1 299 GO:0006797
GO:0008976
AF-A0A1V4UIP1-F1-model_v4 Polyphosphate kinase 2 (PPK2) 0.9851 4 299 GO:0006797
GO:0016301
GO:0016776
AF-A0A536RCV0-F1-model_v4 Polyphosphate kinase 2 family protein 0.9849 43 136 GO:0016301
AF-A0A1V4UAF5-F1-model_v4 Polyphosphate kinase 2 (PPK2) 0.9848 16 299 GO:0006797
GO:0008976

Map