F370400

General Info

Members Datasets Scaffolds Average Seq Length
261 147 261 696

Family's Representative Sequence

Representative Sequence 3300025944|Ga0207661_10000003|Ga0207661_10000003137
Length 844
Sequence MKAADLYDTDFAQWALQNAELLRSKRFSEADLEHIAEEIEDLGKRERHALCSRLMRLMEHLLKWRFQPERRGASWRRTMVTQRIGIRRLLEENPSFRPALAEMAVRAYSDAARLAVLATGLPPAVFRRTVPSRSTNCSTTSSCPRMDLSTPLTYVKGVGPARAAMLEAKGLTTVEDLLGYVPFRYEDRSNLKTIAQLAPGEMATAIIEVRGAKVSGFKRKNLGLFEARFSDSSRAILAAKWFHGGYLANVLHEGMRLAVYGKVEFDTYSGELTMLHPEFEILTGDEEEGEAGLHTGRIVPIYEAPGKLTTKILRTLTHRILSEIGPLEDHLPAFLRQRLRYPDRDTAIRTTHFPPPDSDLRLLNNFRSIQQQRLIFEEFFWLECGVALKRAKARGVPGIGFEINDRVRERVKAMLPFKPTEAQKRVIKEIADDMKAARPMNRLLQGDVGSGKTIVAAEAATIAIENGYQVAVLAPTEILAAQHAIYFRNILGKLGYVVVLLTGSFTPREKQQLKKLVVEGLAHVVVGTHAILEKNVEFQNLGLAIIDEQHRFGVLQRLGMAQKGLTPDILVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPILTKHYTADRIEQAYSFMKKQIEEGRQAYVVYPVIEESETQAMKAAQQMYEHLSTEVFPDISVGLMHGRLGSDEKESVMQRFKEGHTKILVSTTVIEVGVDVPNATVMVVEQAERFGLAQLHQLRGRVGRGAAQSYCILVTEKMNDTARERIRTLVESTDGFYISEMDLKLRGPGEFFGTKQSGLPSLRVANILRDGELLEIARREAVDFVAKPPTEEDLRDAVAYIRDHWQRRYGLVTVG

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
75 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
76 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
77 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
78 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
79 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
82 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
83 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
84 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
85 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
86 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
87 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
88 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
89 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
90 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
97 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
102 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
103 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
104 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
105 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
108 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
111 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
112 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
113 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
114 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
117 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
118 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
119 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
134 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
135 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.38
Nodule 0
Rhizoplane 1.53
Rhizosphere 95.02
Stem 0
Stem Tuber 0
Unclassified 3.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10008600 3300005327 Bacteria 8208
2 Ga0070683_100000002 3300005329 Bacteria 427530
3 Ga0068869_100055382 3300005334 Bacteria 2890
4 Ga0070680_100017951 3300005336 Bacteria 5586
5 Ga0070660_100001157 3300005339 Bacteria 17815
6 Ga0070691_10000464 3300005341 Bacteria 15091
7 Ga0070661_100060139 3300005344 Bacteria 2788
8 Ga0070673_100006945 3300005364 Bacteria 7411
9 Ga0070713_100003283 3300005436 Bacteria 10658
10 Ga0070713_100059838 3300005436 Bacteria 3183
11 Ga0070713_100065584 3300005436 Bacteria 3051
12 Ga0070711_100031249 3300005439 Bacteria 3533
13 Ga0070681_10010802 3300005458 Bacteria 9025
14 Ga0070681_10016159 3300005458 Bacteria 7441
15 Ga0070681_10021389 3300005458 Bacteria 6487
16 Ga0070681_10041665 3300005458 Bacteria 4603
17 Ga0070681_10075090 3300005458 Bacteria 3340
18 Ga0070679_100004205 3300005530 Bacteria 13278
19 Ga0070679_100056202 3300005530 Bacteria 3922
20 Ga0070684_100000007 3300005535 Bacteria 217174
21 Ga0070684_100001007 3300005535 Bacteria 20087
22 Ga0068853_100010961 3300005539 Bacteria 7347
23 Ga0068853_100056951 3300005539 Bacteria 3372
24 Ga0068855_100008876 3300005563 Bacteria 12151
25 Ga0068855_100094908 3300005563 Bacteria 3439
26 Ga0068855_100189535 3300005563 Bacteria 2321
27 Ga0068855_100204949 3300005563 Bacteria 2219
28 Ga0068857_100000748 3300005577 Bacteria 24214
29 Ga0068857_100003079 3300005577 Bacteria 13789
30 Ga0068857_100004360 3300005577 Bacteria 11953
31 Ga0068857_100020624 3300005577 Bacteria 5799
32 Ga0068856_100020316 3300005614 Bacteria 6452
33 Ga0068852_100022027 3300005616 Bacteria 5100
34 Ga0068852_100025290 3300005616 Bacteria 4809
35 Ga0068863_100047584 3300005841 Bacteria 4068
36 Ga0068858_100028686 3300005842 Bacteria 5169
37 Ga0070717_10006396 3300006028 Bacteria 8659
38 Ga0068871_100028624 3300006358 Bacteria 4370
39 Ga0068865_100042092 3300006881 Bacteria 3112
40 Ga0075436_100001102 3300006914 Bacteria 18242
41 Ga0105240_10000159 3300009093 Bacteria 137832
42 Ga0105240_10004324 3300009093 Bacteria 21681
43 Ga0105240_10014141 3300009093 Bacteria 10904
44 Ga0105240_10015017 3300009093 Bacteria 10544
45 Ga0105240_10023066 3300009093 Bacteria 8242
46 Ga0105240_10040750 3300009093 Bacteria 5936
47 Ga0105240_10086148 3300009093 Bacteria 3847
48 Ga0105240_10093015 3300009093 Bacteria 3681
49 Ga0105240_10159892 3300009093 Bacteria 2677
50 Ga0105245_10003189 3300009098 Bacteria 14667
51 Ga0105245_10003475 3300009098 Bacteria 14107
52 Ga0105245_10004393 3300009098 Bacteria 12475
53 Ga0105245_10030045 3300009098 Bacteria 4804
54 Ga0105245_10079966 3300009098 Bacteria 2986
55 Ga0105245_10129061 3300009098 Bacteria 2370
56 Ga0114129_10199150 3300009147 Bacteria 2713
57 Ga0105241_10024263 3300009174 Bacteria 4504
58 Ga0105241_10029649 3300009174 Bacteria 4084
59 Ga0105241_10059099 3300009174 Bacteria 2947
60 Ga0105242_10004923 3300009176 Bacteria 10343
61 Ga0105242_10011218 3300009176 Bacteria 6886
62 Ga0105242_10013173 3300009176 Bacteria 6382
63 Ga0105242_10056635 3300009176 Bacteria 3208
64 Ga0105242_10086289 3300009176 Bacteria 2634
65 Ga0105248_10002284 3300009177 Bacteria 21220
66 Ga0105248_10005063 3300009177 Bacteria 14555
67 Ga0105248_10016896 3300009177 Bacteria 8034
68 Ga0105248_10076437 3300009177 Bacteria 3764
69 Ga0105237_10011538 3300009545 Bacteria 9345
70 Ga0105237_10035260 3300009545 Bacteria 5063
71 Ga0105237_10082169 3300009545 Bacteria 3212
72 Ga0105238_10009184 3300009551 Bacteria 9896
73 Ga0105238_10011968 3300009551 Bacteria 8740
74 Ga0105238_10024628 3300009551 Bacteria 6134
75 Ga0105238_10032048 3300009551 Bacteria 5349
76 Ga0105238_10040154 3300009551 Bacteria 4742
77 Ga0105238_10082979 3300009551 Bacteria 3194
78 Ga0105238_10089273 3300009551 Bacteria 3069
79 Ga0105249_10030059 3300009553 Bacteria 4908
80 Ga0105239_10005520 3300010375 Bacteria 14812
81 Ga0105239_10006818 3300010375 Bacteria 13173
82 Ga0105239_10006904 3300010375 Bacteria 13096
83 Ga0105239_10006976 3300010375 Bacteria 13014
84 Ga0105239_10011686 3300010375 Bacteria 9799
85 Ga0105239_10175440 3300010375 Bacteria 2397
86 Ga0105246_10033984 3300011119 Bacteria 3393
87 Ga0157370_10006588 3300013104 Bacteria 12772
88 Ga0157370_10012945 3300013104 Bacteria 8623
89 Ga0157370_10027811 3300013104 Bacteria 5573
90 Ga0157369_10001305 3300013105 Bacteria 30995
91 Ga0157369_10019065 3300013105 Bacteria 7681
92 Ga0157369_10028721 3300013105 Bacteria 6152
93 Ga0157369_10039090 3300013105 Bacteria 5187
94 Ga0157369_10072726 3300013105 Bacteria 3690
95 Ga0157374_10008795 3300013296 Bacteria 8641
96 Ga0157378_10005542 3300013297 Bacteria 11053
97 Ga0163162_10005097 3300013306 Bacteria 12662
98 Ga0157372_10003564 3300013307 Bacteria 16758
99 Ga0157372_10041545 3300013307 Bacteria 5085
100 Ga0157375_10006223 3300013308 Bacteria 10395
101 Ga0163163_10009422 3300014325 Bacteria 8720
102 Ga0163163_10039556 3300014325 Bacteria 4602
103 Ga0157376_10070353 3300014969 Bacteria 2970
104 Ga0213872_10000111 3300021361 Bacteria 75008
105 Ga0213875_10000002 3300021388 Bacteria 921066
106 Ga0213875_10000027 3300021388 Bacteria 190420
107 Ga0213875_10003081 3300021388 Bacteria 9633
108 Ga0207705_10004579 3300025909 Bacteria 10446
109 Ga0207654_10022297 3300025911 Bacteria 3377
110 Ga0207654_10031201 3300025911 Bacteria 2933
111 Ga0207707_10012260 3300025912 Bacteria 7451
112 Ga0207707_10016764 3300025912 Bacteria 6382
113 Ga0207707_10029220 3300025912 Bacteria 4819
114 Ga0207707_10063164 3300025912 Bacteria 3223
115 Ga0207695_10001048 3300025913 Bacteria 48552
116 Ga0207695_10003028 3300025913 Bacteria 24127
117 Ga0207695_10004266 3300025913 Bacteria 19632
118 Ga0207671_10014916 3300025914 Bacteria 6112
119 Ga0207671_10030335 3300025914 Bacteria 4032
120 Ga0207671_10030368 3300025914 Bacteria 4030
121 Ga0207660_10009775 3300025917 Bacteria 6209
122 Ga0207657_10001984 3300025919 Bacteria 22095
123 Ga0207657_10044813 3300025919 Bacteria 3886
124 Ga0207694_10003370 3300025924 Bacteria 12725
125 Ga0207694_10006190 3300025924 Bacteria 9138
126 Ga0207694_10009998 3300025924 Bacteria 7152
127 Ga0207694_10017344 3300025924 Bacteria 5444
128 Ga0207694_10024848 3300025924 Bacteria 4550
129 Ga0207694_10032719 3300025924 Bacteria 3982
130 Ga0207687_10005113 3300025927 Bacteria 8695
131 Ga0207687_10016591 3300025927 Bacteria 4838
132 Ga0207700_10001381 3300025928 Bacteria 13780
133 Ga0207700_10036612 3300025928 Bacteria 3547
134 Ga0207700_10041462 3300025928 Bacteria 3368
135 Ga0207664_10066275 3300025929 Bacteria 2894
136 Ga0207644_10025721 3300025931 Bacteria 4049
137 Ga0207686_10027730 3300025934 Bacteria 3319
138 Ga0207704_10019879 3300025938 Bacteria 3539
139 Ga0207711_10009337 3300025941 Bacteria 8190
140 Ga0207711_10012019 3300025941 Bacteria 7196
141 Ga0207711_10020090 3300025941 Bacteria 5566
142 Ga0207689_10017551 3300025942 Bacteria 6050
143 Ga0207661_10000003 3300025944 Bacteria 611941
144 Ga0207661_10059384 3300025944 Bacteria 3082
145 Ga0207661_10087386 3300025944 Bacteria 2589
146 Ga0207667_10004038 3300025949 Bacteria 18032
147 Ga0207667_10012557 3300025949 Bacteria 9746
148 Ga0207667_10016961 3300025949 Bacteria 8216
149 Ga0207703_10004120 3300026035 Bacteria 12003
150 Ga0207639_10003930 3300026041 Bacteria 10032
151 Ga0207702_10080099 3300026078 Bacteria 2833
152 Ga0207702_10081479 3300026078 Bacteria 2811
153 Ga0207641_10030035 3300026088 Bacteria 4499
154 Ga0207641_10037178 3300026088 Bacteria 4065
155 Ga0207648_10043204 3300026089 Bacteria 3957
156 Ga0207674_10004004 3300026116 Bacteria 17894
157 Ga0207674_10004814 3300026116 Bacteria 16171
158 Ga0207674_10004853 3300026116 Bacteria 16102
159 Ga0207674_10013147 3300026116 Bacteria 9212
160 Ga0268264_10004158 3300028381 Bacteria 12370
161 Ga0265334_10000331 3300028573 Bacteria 25396
162 Ga0265338_10005268 3300028800 Bacteria 16944
163 Ga0265324_10008080 3300029957 Bacteria 4215
164 Ga0265320_10001745 3300031240 Bacteria 15415
165 Ga0265340_10008666 3300031247 Bacteria 5483
166 Ga0265339_10031195 3300031249 Bacteria 3013
167 Ga0265316_10000651 3300031344 Bacteria 38560
168 Ga0265316_10000788 3300031344 Bacteria 34909
169 Ga0265313_10001600 3300031595 Bacteria 21015
170 Ga0265313_10014481 3300031595 Bacteria 4655
171 Ga0265314_10000216 3300031711 Bacteria 85672
172 Ga0265314_10009769 3300031711 Bacteria 8060
173 Ga0265314_10017467 3300031711 Bacteria 5631
174 Ga0265342_10043530 3300031712 Bacteria 2709
175 Ga0316576_10011076 3300031727 Bacteria 5888
176 Ga0316577_10018546 3300031733 Bacteria 3849
177 Ga0373934_0000307 3300035086 Bacteria 17172
178 Ga0373954_0023890 3300035118 Bacteria 2785
179 Ga0373943_0010135 3300035170 Bacteria 4227
180 Ga0373927_0003333 3300035695 Bacteria 11563
181 Ga0373927_0003547 3300035695 Bacteria 11154
182 Ga0373927_0003678 3300035695 Bacteria 10910
183 Ga0373927_0008153 3300035695 Bacteria 7066
184 Ga0373933_0026302 3300035724 Bacteria 3341
185 Ga0373947_0000760 3300035725 Bacteria 19336
186 Ga0373947_0010605 3300035725 Bacteria 5288
187 Ga0373947_0042428 3300035725 Bacteria 2715
188 Ga0373937_0053582 3300036401 Bacteria 3700
189 Ga0373925_0000240 3300037068 Bacteria 57904
190 Ga0373925_0013141 3300037068 Bacteria 5993
191 Ga0436364_0446012 3300037853 Bacteria 193523
192 Ga0436364_0612043 3300037853 Bacteria 326330
193 Ga0436364_1090821 3300037853 Bacteria 4197
194 Ga0436365_0166212 3300039437 Bacteria 5811
195 Ga0436365_0238349 3300039437 Bacteria 9503
196 Ga0453684_0045251 3300044712 Bacteria 5875
197 Ga0466957_0000591 3300044842 Bacteria 18425
198 Ga0466958_0043698 3300045836 Bacteria 2699
199 Ga0495592_0051106 3300046454 Bacteria 3070
200 Ga0495651_0004821 3300046462 Bacteria 10321
201 Ga0495580_0008444 3300046472 Bacteria 8193
202 Ga0495580_0009535 3300046472 Bacteria 7631
203 Ga0495580_0013681 3300046472 Bacteria 6184
204 Ga0495582_0012791 3300046473 Bacteria 4623
205 Ga0495662_0017402 3300046476 Bacteria 3479
206 Ga0495664_0007883 3300046477 Bacteria 5926
207 Ga0495608_0026346 3300046511 Bacteria 3965
208 Ga0495628_0071834 3300046516 Bacteria 2697
209 Ga0495630_0031719 3300046517 Bacteria 3935
210 Ga0495652_0034441 3300046529 Bacteria 4413
211 Ga0495665_0030708 3300046531 Bacteria 2876
212 Ga0495587_0005340 3300046536 Bacteria 8404
213 Ga0495587_0015178 3300046536 Bacteria 4814
214 Ga0495587_0017583 3300046536 Bacteria 4441
215 Ga0495645_0001701 3300046543 Bacteria 14949
216 Ga0495635_0013214 3300046663 Bacteria 5779
217 Ga0495623_0014428 3300046679 Bacteria 5114
218 Ga0495613_0063865 3300046689 Bacteria 2693
219 Ga0495600_0034518 3300046809 Bacteria 3284
220 Ga0495604_0044456 3300047317 Bacteria 3470
221 Ga0495674_0027743 3300047319 Bacteria 5170
222 Ga0495680_0006110 3300047322 Bacteria 11246
223 Ga0495675_0052249 3300047444 Bacteria 2595
224 Ga0495684_0014272 3300047471 Bacteria 6113
225 Ga0495684_0019783 3300047471 Bacteria 5187
226 Ga0495684_0029356 3300047471 Bacteria 4221
227 Ga0495684_0035568 3300047471 Bacteria 3819
228 Ga0495602_0004954 3300048088 Bacteria 13954
229 Ga0495602_0054485 3300048088 Bacteria 3530
230 Ga0496104_0064337 3300048907 Bacteria 3479
231 Ga0496112_0035737 3300048915 Bacteria 4843
232 Ga0496115_0013916 3300048918 Bacteria 6088
233 Ga0496115_0060382 3300048918 Bacteria 3055
234 Ga0501031_0005294 3300049568 Bacteria 8401
235 Ga0501032_0002547 3300049569 Bacteria 14265
236 Ga0501033_0017324 3300049570 Bacteria 5444
237 Ga0501034_0024699 3300049571 Bacteria 6112
238 Ga0501036_0003321 3300049572 Bacteria 12854
239 Ga0501037_0006032 3300049573 Bacteria 8844
240 Ga0501038_0012345 3300049574 Bacteria 7806
241 Ga0501039_0003451 3300049575 Bacteria 11807
242 Ga0501043_0040848 3300049579 Bacteria 3645
243 Ga0501047_0022989 3300049581 Bacteria 5984
244 Ga0501067_0000876 3300049583 Bacteria 16160
245 Ga0501068_0001554 3300049584 Bacteria 12198
246 Ga0501069_0036392 3300049585 Bacteria 2714
247 Ga0501072_0000506 3300049588 Bacteria 28068
248 Ga0501073_0006727 3300049589 Bacteria 8560
249 Ga0501074_0008547 3300049590 Bacteria 7417
250 Ga0501076_0008151 3300049592 Bacteria 7666
251 Ga0501077_0000721 3300049593 Bacteria 20009
252 Ga0501079_0000730 3300049741 Bacteria 22212
253 Ga0501080_0000034 3300049742 Bacteria 85093
254 Ga0501035_0012813 3300049822 Bacteria 7743
255 Ga0501044_0005724 3300049823 Bacteria 13775
256 Ga0501044_0008817 3300049823 Bacteria 11030
257 Ga0501044_0021456 3300049823 Bacteria 6889
258 Ga0500568_0000507 3300053139 Bacteria 28722
259 Ga0501084_0005994 3300054114 Bacteria 9998
260 Ga0501082_0002292 3300060353 Bacteria 16740
261 Ga0501082_0008916 3300060353 Bacteria 8654

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025917 Ga0207660_10009775 Ga0207660_100097754 582
2 3300025911 Ga0207654_10022297 Ga0207654_100222972 604
3 3300031727 Ga0316576_10011076 Ga0316576_100110763 658
4 3300031733 Ga0316577_10018546 Ga0316577_100185462 658
5 3300028573 Ga0265334_10000331 Ga0265334_1000033112 664
6 3300046536 Ga0495587_0017583 Ga0495587_0017583_1951_3957 668
7 3300049823 Ga0501044_0005724 Ga0501044_0005724_4613_6643 676
8 3300005436 Ga0070713_100003283 Ga0070713_1000032834 677
9 3300005439 Ga0070711_100031249 Ga0070711_1000312492 677
10 3300006358 Ga0068871_100028624 Ga0068871_1000286242 677
11 3300021361 Ga0213872_10000111 Ga0213872_1000011121 677
12 3300025928 Ga0207700_10001381 Ga0207700_100013816 677
13 3300025929 Ga0207664_10066275 Ga0207664_100662752 677
14 3300026041 Ga0207639_10003930 Ga0207639_100039306 677
15 3300037853 Ga0436364_1090821 Ga0436364_1090821_892_2931 678
16 3300039437 Ga0436365_0166212 Ga0436365_0166212_3464_5503 678
17 3300039437 Ga0436365_0238349 Ga0436365_0238349_1201_3240 678
18 3300005336 Ga0070680_100017951 Ga0070680_1000179513 679
19 3300005841 Ga0068863_100047584 Ga0068863_1000475844 679
20 3300009093 Ga0105240_10004324 Ga0105240_100043243 679
21 3300009093 Ga0105240_10014141 Ga0105240_100141417 679
22 3300009545 Ga0105237_10035260 Ga0105237_100352603 679
23 3300026088 Ga0207641_10037178 Ga0207641_100371782 679
24 3300035695 Ga0373927_0003678 Ga0373927_0003678_4395_6437 679
25 3300046454 Ga0495592_0051106 Ga0495592_0051106_129_2171 679
26 3300046472 Ga0495580_0009535 Ga0495580_0009535_3508_5550 679
27 3300046531 Ga0495665_0030708 Ga0495665_0030708_816_2858 679
28 3300046543 Ga0495645_0001701 Ga0495645_0001701_12872_14914 679
29 3300046689 Ga0495613_0063865 Ga0495613_0063865_34_2076 679
30 3300047444 Ga0495675_0052249 Ga0495675_0052249_29_2071 679
31 3300009176 Ga0105242_10056635 Ga0105242_100566353 680
32 3300005458 Ga0070681_10041665 Ga0070681_100416652 681
33 3300005530 Ga0070679_100056202 Ga0070679_1000562022 681
34 3300021388 Ga0213875_10000027 Ga0213875_1000002743 687
35 3300035118 Ga0373954_0023890 Ga0373954_0023890_486_2552 687
36 3300035695 Ga0373927_0008153 Ga0373927_0008153_3881_5947 687
37 3300035725 Ga0373947_0042428 Ga0373947_0042428_74_2140 687
38 3300036401 Ga0373937_0053582 Ga0373937_0053582_1006_3072 687
39 3300037853 Ga0436364_0446012 Ga0436364_0446012_185400_187487 687
40 3300047471 Ga0495684_0029356 Ga0495684_0029356_132_2198 687
41 3300021388 Ga0213875_10000002 Ga0213875_10000002161 688
42 3300037853 Ga0436364_0612043 Ga0436364_0612043_194649_196739 688
43 3300048907 Ga0496104_0064337 Ga0496104_0064337_1161_3320 688
44 3300048915 Ga0496112_0035737 Ga0496112_0035737_2625_4784 688
45 3300049823 Ga0501044_0021456 Ga0501044_0021456_1431_3518 688
46 3300005539 Ga0068853_100010961 Ga0068853_1000109615 689
47 3300005614 Ga0068856_100020316 Ga0068856_1000203167 689
48 3300006028 Ga0070717_10006396 Ga0070717_100063963 689
49 3300013105 Ga0157369_10001305 Ga0157369_1000130523 689
50 3300014969 Ga0157376_10070353 Ga0157376_100703531 689
51 3300021388 Ga0213875_10003081 Ga0213875_100030812 689
52 3300025909 Ga0207705_10004579 Ga0207705_100045795 689
53 3300026078 Ga0207702_10080099 Ga0207702_100800992 689
54 3300009093 Ga0105240_10159892 Ga0105240_101598922 690
55 3300031344 Ga0265316_10000651 Ga0265316_1000065111 690
56 3300031595 Ga0265313_10014481 Ga0265313_100144814 690
57 3300031711 Ga0265314_10017467 Ga0265314_100174674 690
58 3300044712 Ga0453684_0045251 Ga0453684_0045251_253_2328 690
59 3300044842 Ga0466957_0000591 Ga0466957_0000591_11623_13833 690
60 3300045836 Ga0466958_0043698 Ga0466958_0043698_22_2232 690
61 3300049568 Ga0501031_0005294 Ga0501031_0005294_1770_3872 690
62 3300049569 Ga0501032_0002547 Ga0501032_0002547_531_2633 690
63 3300049570 Ga0501033_0017324 Ga0501033_0017324_2904_5006 690
64 3300049571 Ga0501034_0024699 Ga0501034_0024699_2452_4554 690
65 3300049572 Ga0501036_0003321 Ga0501036_0003321_9648_11750 690
66 3300049573 Ga0501037_0006032 Ga0501037_0006032_3618_5720 690
67 3300049574 Ga0501038_0012345 Ga0501038_0012345_2580_4682 690
68 3300049575 Ga0501039_0003451 Ga0501039_0003451_9241_11343 690
69 3300049579 Ga0501043_0040848 Ga0501043_0040848_1105_3207 690
70 3300049581 Ga0501047_0022989 Ga0501047_0022989_2452_4554 690
71 3300049583 Ga0501067_0000876 Ga0501067_0000876_2580_4682 690
72 3300049584 Ga0501068_0001554 Ga0501068_0001554_5868_7970 690
73 3300049585 Ga0501069_0036392 Ga0501069_0036392_178_2280 690
74 3300049588 Ga0501072_0000506 Ga0501072_0000506_14360_16462 690
75 3300049589 Ga0501073_0006727 Ga0501073_0006727_4311_6413 690
76 3300049590 Ga0501074_0008547 Ga0501074_0008547_1233_3335 690
77 3300049592 Ga0501076_0008151 Ga0501076_0008151_464_2566 690
78 3300049593 Ga0501077_0000721 Ga0501077_0000721_6721_8823 690
79 3300049741 Ga0501079_0000730 Ga0501079_0000730_6187_8289 690
80 3300049742 Ga0501080_0000034 Ga0501080_0000034_73345_75447 690
81 3300049822 Ga0501035_0012813 Ga0501035_0012813_4083_6185 690
82 3300049823 Ga0501044_0008817 Ga0501044_0008817_4974_7076 690
83 3300054114 Ga0501084_0005994 Ga0501084_0005994_1431_3533 690
84 3300060353 Ga0501082_0008916 Ga0501082_0008916_3973_6075 690
85 3300005329 Ga0070683_100000002 Ga0070683_100000002139 691
86 3300005334 Ga0068869_100055382 Ga0068869_1000553822 691
87 3300005364 Ga0070673_100006945 Ga0070673_1000069458 691
88 3300005436 Ga0070713_100059838 Ga0070713_1000598382 691
89 3300005436 Ga0070713_100065584 Ga0070713_1000655841 691
90 3300005458 Ga0070681_10021389 Ga0070681_100213895 691
91 3300005535 Ga0070684_100000007 Ga0070684_100000007139 691
92 3300005539 Ga0068853_100056951 Ga0068853_1000569514 691
93 3300005563 Ga0068855_100189535 Ga0068855_1001895351 691
94 3300005577 Ga0068857_100000748 Ga0068857_10000074815 691
95 3300005616 Ga0068852_100022027 Ga0068852_1000220274 691
96 3300006914 Ga0075436_100001102 Ga0075436_10000110213 691
97 3300009093 Ga0105240_10000159 Ga0105240_1000015924 691
98 3300009098 Ga0105245_10003189 Ga0105245_1000318912 691
99 3300009147 Ga0114129_10199150 Ga0114129_101991502 691
100 3300009176 Ga0105242_10011218 Ga0105242_100112183 691
101 3300009177 Ga0105248_10002284 Ga0105248_1000228413 691
102 3300009177 Ga0105248_10016896 Ga0105248_100168965 691
103 3300009551 Ga0105238_10009184 Ga0105238_100091844 691
104 3300009551 Ga0105238_10040154 Ga0105238_100401543 691
105 3300010375 Ga0105239_10006818 Ga0105239_100068187 691
106 3300013104 Ga0157370_10006588 Ga0157370_100065883 691
107 3300013105 Ga0157369_10072726 Ga0157369_100727263 691
108 3300013297 Ga0157378_10005542 Ga0157378_100055428 691
109 3300013307 Ga0157372_10041545 Ga0157372_100415452 691
110 3300014325 Ga0163163_10039556 Ga0163163_100395564 691
111 3300025911 Ga0207654_10031201 Ga0207654_100312012 691
112 3300025912 Ga0207707_10012260 Ga0207707_100122604 691
113 3300025913 Ga0207695_10001048 Ga0207695_1000104832 691
114 3300025914 Ga0207671_10014916 Ga0207671_100149163 691
115 3300025924 Ga0207694_10009998 Ga0207694_100099982 691
116 3300025924 Ga0207694_10032719 Ga0207694_100327192 691
117 3300025928 Ga0207700_10041462 Ga0207700_100414622 691
118 3300025934 Ga0207686_10027730 Ga0207686_100277302 691
119 3300025941 Ga0207711_10012019 Ga0207711_100120192 691
120 3300025942 Ga0207689_10017551 Ga0207689_100175513 691
121 3300025944 Ga0207661_10000003 Ga0207661_10000003137 691
122 3300026089 Ga0207648_10043204 Ga0207648_100432043 691
123 3300026116 Ga0207674_10013147 Ga0207674_100131472 691
124 3300028800 Ga0265338_10005268 Ga0265338_100052681 691
125 3300029957 Ga0265324_10008080 Ga0265324_100080804 691
126 3300031240 Ga0265320_10001745 Ga0265320_100017456 691
127 3300031247 Ga0265340_10008666 Ga0265340_100086661 691
128 3300031249 Ga0265339_10031195 Ga0265339_100311953 691
129 3300031344 Ga0265316_10000788 Ga0265316_100007888 691
130 3300031712 Ga0265342_10043530 Ga0265342_100435302 691
131 3300035086 Ga0373934_0000307 Ga0373934_0000307_6091_8166 691
132 3300035695 Ga0373927_0003333 Ga0373927_0003333_1233_3335 691
133 3300035695 Ga0373927_0003547 Ga0373927_0003547_2330_4405 691
134 3300035725 Ga0373947_0000760 Ga0373947_0000760_15934_18036 691
135 3300037068 Ga0373925_0000240 Ga0373925_0000240_3419_5521 691
136 3300037068 Ga0373925_0013141 Ga0373925_0013141_2945_5044 691
137 3300046462 Ga0495651_0004821 Ga0495651_0004821_2887_4986 691
138 3300046472 Ga0495580_0013681 Ga0495580_0013681_3007_5112 691
139 3300046473 Ga0495582_0012791 Ga0495582_0012791_90_2165 691
140 3300046476 Ga0495662_0017402 Ga0495662_0017402_1263_3362 691
141 3300046477 Ga0495664_0007883 Ga0495664_0007883_2857_4956 691
142 3300046511 Ga0495608_0026346 Ga0495608_0026346_1356_3455 691
143 3300046516 Ga0495628_0071834 Ga0495628_0071834_381_2480 691
144 3300046517 Ga0495630_0031719 Ga0495630_0031719_855_2954 691
145 3300046529 Ga0495652_0034441 Ga0495652_0034441_579_2678 691
146 3300046536 Ga0495587_0005340 Ga0495587_0005340_3372_5471 691
147 3300046536 Ga0495587_0015178 Ga0495587_0015178_2222_4321 691
148 3300046663 Ga0495635_0013214 Ga0495635_0013214_2763_4862 691
149 3300046679 Ga0495623_0014428 Ga0495623_0014428_1965_4064 691
150 3300046809 Ga0495600_0034518 Ga0495600_0034518_11_2110 691
151 3300047317 Ga0495604_0044456 Ga0495604_0044456_390_2489 691
152 3300047319 Ga0495674_0027743 Ga0495674_0027743_2581_4680 691
153 3300047322 Ga0495680_0006110 Ga0495680_0006110_1031_3130 691
154 3300047471 Ga0495684_0014272 Ga0495684_0014272_2974_5073 691
155 3300047471 Ga0495684_0019783 Ga0495684_0019783_592_2667 691
156 3300047471 Ga0495684_0035568 Ga0495684_0035568_471_2570 691
157 3300048088 Ga0495602_0054485 Ga0495602_0054485_781_2880 691
158 3300048918 Ga0496115_0060382 Ga0496115_0060382_73_2148 691
159 3300060353 Ga0501082_0002292 Ga0501082_0002292_92_2191 691
160 3300005341 Ga0070691_10000464 Ga0070691_100004644 692
161 3300005344 Ga0070661_100060139 Ga0070661_1000601392 692
162 3300005458 Ga0070681_10016159 Ga0070681_100161594 692
163 3300005530 Ga0070679_100004205 Ga0070679_10000420512 692
164 3300005535 Ga0070684_100001007 Ga0070684_10000100716 692
165 3300005577 Ga0068857_100004360 Ga0068857_10000436012 692
166 3300005616 Ga0068852_100025290 Ga0068852_1000252905 692
167 3300009093 Ga0105240_10040750 Ga0105240_100407506 692
168 3300009093 Ga0105240_10086148 Ga0105240_100861484 692
169 3300009098 Ga0105245_10003475 Ga0105245_100034754 692
170 3300009098 Ga0105245_10030045 Ga0105245_100300454 692
171 3300009174 Ga0105241_10029649 Ga0105241_100296494 692
172 3300009545 Ga0105237_10011538 Ga0105237_100115384 692
173 3300009545 Ga0105237_10082169 Ga0105237_100821694 692
174 3300009551 Ga0105238_10082979 Ga0105238_100829792 692
175 3300009551 Ga0105238_10089273 Ga0105238_100892732 692
176 3300009553 Ga0105249_10030059 Ga0105249_100300594 692
177 3300010375 Ga0105239_10005520 Ga0105239_1000552015 692
178 3300010375 Ga0105239_10175440 Ga0105239_101754402 692
179 3300011119 Ga0105246_10033984 Ga0105246_100339842 692
180 3300013105 Ga0157369_10019065 Ga0157369_100190655 692
181 3300013105 Ga0157369_10039090 Ga0157369_100390902 692
182 3300013307 Ga0157372_10003564 Ga0157372_100035645 692
183 3300013308 Ga0157375_10006223 Ga0157375_100062236 692
184 3300025912 Ga0207707_10016764 Ga0207707_100167645 692
185 3300025913 Ga0207695_10004266 Ga0207695_1000426615 692
186 3300025914 Ga0207671_10030335 Ga0207671_100303353 692
187 3300025919 Ga0207657_10044813 Ga0207657_100448132 692
188 3300025924 Ga0207694_10003370 Ga0207694_100033707 692
189 3300025924 Ga0207694_10017344 Ga0207694_100173443 692
190 3300025927 Ga0207687_10005113 Ga0207687_100051136 692
191 3300025927 Ga0207687_10016591 Ga0207687_100165914 692
192 3300025928 Ga0207700_10036612 Ga0207700_100366123 692
193 3300025941 Ga0207711_10009337 Ga0207711_100093376 692
194 3300025944 Ga0207661_10059384 Ga0207661_100593841 692
195 3300025944 Ga0207661_10087386 Ga0207661_100873861 692
196 3300025949 Ga0207667_10004038 Ga0207667_1000403814 692
197 3300025949 Ga0207667_10012557 Ga0207667_100125573 692
198 3300026078 Ga0207702_10081479 Ga0207702_100814791 692
199 3300026116 Ga0207674_10004004 Ga0207674_100040049 692
200 3300031595 Ga0265313_10001600 Ga0265313_100016009 692
201 3300031711 Ga0265314_10000216 Ga0265314_1000021637 692
202 3300035170 Ga0373943_0010135 Ga0373943_0010135_1890_3968 692
203 3300035724 Ga0373933_0026302 Ga0373933_0026302_589_2667 692
204 3300035725 Ga0373947_0010605 Ga0373947_0010605_1553_3631 692
205 3300048088 Ga0495602_0004954 Ga0495602_0004954_8688_10766 692
206 3300046472 Ga0495580_0008444 Ga0495580_0008444_3480_5717 693
207 3300053139 Ga0500568_0000507 Ga0500568_0000507_16321_18423 693
208 3300005327 Ga0070658_10008600 Ga0070658_100086004 696
209 3300005339 Ga0070660_100001157 Ga0070660_1000011574 696
210 3300005458 Ga0070681_10010802 Ga0070681_100108022 696
211 3300005458 Ga0070681_10075090 Ga0070681_100750901 696
212 3300005563 Ga0068855_100008876 Ga0068855_1000088766 696
213 3300005563 Ga0068855_100094908 Ga0068855_1000949082 696
214 3300005563 Ga0068855_100204949 Ga0068855_1002049491 696
215 3300005577 Ga0068857_100003079 Ga0068857_1000030793 696
216 3300005577 Ga0068857_100020624 Ga0068857_1000206242 696
217 3300005842 Ga0068858_100028686 Ga0068858_1000286863 696
218 3300006881 Ga0068865_100042092 Ga0068865_1000420922 696
219 3300009093 Ga0105240_10015017 Ga0105240_100150174 696
220 3300009093 Ga0105240_10023066 Ga0105240_100230663 696
221 3300009093 Ga0105240_10093015 Ga0105240_100930153 696
222 3300009098 Ga0105245_10004393 Ga0105245_100043937 696
223 3300009098 Ga0105245_10079966 Ga0105245_100799662 696
224 3300009098 Ga0105245_10129061 Ga0105245_101290612 696
225 3300009174 Ga0105241_10024263 Ga0105241_100242632 696
226 3300009174 Ga0105241_10059099 Ga0105241_100590991 696
227 3300009176 Ga0105242_10004923 Ga0105242_100049239 696
228 3300009176 Ga0105242_10013173 Ga0105242_100131734 696
229 3300009176 Ga0105242_10086289 Ga0105242_100862892 696
230 3300009177 Ga0105248_10005063 Ga0105248_1000506311 696
231 3300009177 Ga0105248_10076437 Ga0105248_100764372 696
232 3300009551 Ga0105238_10011968 Ga0105238_100119686 696
233 3300009551 Ga0105238_10024628 Ga0105238_100246283 696
234 3300009551 Ga0105238_10032048 Ga0105238_100320481 696
235 3300010375 Ga0105239_10006904 Ga0105239_100069045 696
236 3300010375 Ga0105239_10006976 Ga0105239_100069764 696
237 3300010375 Ga0105239_10011686 Ga0105239_100116863 696
238 3300013104 Ga0157370_10012945 Ga0157370_100129453 696
239 3300013104 Ga0157370_10027811 Ga0157370_100278112 696
240 3300013105 Ga0157369_10028721 Ga0157369_100287214 696
241 3300013296 Ga0157374_10008795 Ga0157374_100087951 696
242 3300013306 Ga0163162_10005097 Ga0163162_100050975 696
243 3300014325 Ga0163163_10009422 Ga0163163_100094223 696
244 3300025912 Ga0207707_10029220 Ga0207707_100292203 696
245 3300025912 Ga0207707_10063164 Ga0207707_100631643 696
246 3300025913 Ga0207695_10003028 Ga0207695_1000302813 696
247 3300025914 Ga0207671_10030368 Ga0207671_100303683 696
248 3300025919 Ga0207657_10001984 Ga0207657_100019844 696
249 3300025924 Ga0207694_10006190 Ga0207694_100061903 696
250 3300025924 Ga0207694_10024848 Ga0207694_100248484 696
251 3300025931 Ga0207644_10025721 Ga0207644_100257212 696
252 3300025938 Ga0207704_10019879 Ga0207704_100198792 696
253 3300025941 Ga0207711_10020090 Ga0207711_100200904 696
254 3300025949 Ga0207667_10016961 Ga0207667_100169614 696
255 3300026035 Ga0207703_10004120 Ga0207703_100041203 696
256 3300026088 Ga0207641_10030035 Ga0207641_100300354 696
257 3300026116 Ga0207674_10004814 Ga0207674_100048146 696
258 3300026116 Ga0207674_10004853 Ga0207674_1000485314 696
259 3300028381 Ga0268264_10004158 Ga0268264_100041588 696
260 3300031711 Ga0265314_10009769 Ga0265314_100097695 696
261 3300048918 Ga0496115_0013916 Ga0496115_0013916_3504_5594 696

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01724

DUF29

Domain of unknown function DUF29

6

139

0.97

PF19833

RecG_dom3_C

ATP-dependent DNA helicase RecG, domain 3, C-terminal

761

835

0.9

PF17191

RecG_wedge

RecG wedge domain

151

324

0.88

PF00270

DEAD

DEAD/DEAH box helicase

420

584

0.83

PF00271

Helicase_C

Helicase conserved C-terminal domain

612

735

0.81

PF22590

Cas3-like_C_2

CRISPR-associated nuclease/helicase Cas3, C-terminal

643

736

0.8

PF04851

ResIII

Type III restriction enzyme, res subunit

416

578

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6m6b-assembly1.cif.gz_M cryo-em structure of thermus thermophilus mfd in complex with rna polymerase and atp-gamma-s 0.831 234 660
3e0e-assembly1.cif.gz_A crystal structure of a domain of replication protein a from methanococcus maripaludis. northeast structural genomics targe mrr110b 0.7969 38 130
6xeo-assembly1.cif.gz_A structure of mfd bound to dsdna 0.7856 218 675
7ssg-assembly1.cif.gz_A mfd dna complex 0.7823 245 628
4db2-assembly1.cif.gz_C mss116p dead-box helicase domain 2 bound to an rna duplex 0.779 458 615
ID Description Score Start End Superfamily
af_P24230_457_630_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9697 455 627 3.40.50.300
af_P24230_457_630_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9588 455 627 3.40.50.300
af_O50581_448_620_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9459 455 627 3.40.50.300
af_O50581_448_620_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9406 455 627 3.40.50.300
af_P9WMQ7_227_478_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9126 213 446 3.40.50.300
ID Description Score Start End GO Terms
AF-X0V5J7-F1-model_v4 Helicase ATP-binding domain-containing protein 0.9719 257 378 GO:0003677
GO:0003678
GO:0005524
GO:0006281
GO:0016787
AF-J4SJG1-F1-model_v4 deleted 0.9706 278 386
AF-B3FF69-F1-model_v4 RecG 0.9608 448 630 GO:0003677
GO:0003678
GO:0005524
GO:0006281
GO:0016787
AF-A0A535QER4-F1-model_v4 DNA helicase RecG 0.9583 447 550 GO:0003677
GO:0003678
GO:0005524
GO:0006281
GO:0016787
AF-A0A5S3VVF0-F1-model_v4 ATP-dependent DNA helicase RecG 0.9547 296 419 GO:0003677
GO:0003678
GO:0005524
GO:0006281
GO:0016787

Feature Viewer

pLDDT pTM Quality
82.07 0.64 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map