F371321

General Info

Members Datasets Scaffolds Average Seq Length
262 200 222 468

Family's Representative Sequence

Representative Sequence 3300046514|Ga0495618_0021573|Ga0495618_0021573_1928_3592
Length 554
Sequence LIALVVEHEVDDRAFGERGRLIENDPAVLHVRTQSAHRDNDTPAGRQGKAVRGLEWPPRCPPLPAGARTRDTARAMTERVRPYLFYGATTALCGTCLRTVEAKEVIEDGRVFLLKRCPEHGGERVLLADDADYWRSARERYLKPPEQVQKPNTAFHWGCPYDCGICTEHEQHGCVVLLEITDHCNLRCPTCYASSGPERLQHRDLPTIERMLDCIVRNEGEPDVVQISGGEPTLHPQFFEVLAACRRRPIRHLMLNTNGIRIAQEPGFAERLAEQRQGFEVYLQFDSLREQPLRALRGADLRRVREQALAKLNALDLSTTLVVTVRRGLNDGELGELVRFAVAQRCVRGITFQPVQEAGRCDGHDAAAHRLTLSEVRRRLLEQCDWFLPADIVPVPCHPDCLAMAYALRRPSARSPITPLTGLVPTEVLLRGTRNTITLERDAQLQREFVRTFSTAHGPEGAAAAVARLLCCLPGVAVGEQPLRYDDVFRIVIMKFLDRHDLDLRSVRKSCVHIAHPDGRRIIPFDTYNLFYRDGLEALVLAPLRARALGTAPA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
3 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
4 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
5 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
6 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
7 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
8 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
9 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
10 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
11 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
12 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
13 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
14 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
15 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
16 2738543023 Pedobacter sp. OK628 Isolate Unclassified
17 2739367651 Pedobacter sp. OK291 Isolate Unclassified
18 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
19 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
20 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
21 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
22 2818991437 Pedobacter terrae 518 Isolate Unclassified
23 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
24 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
25 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
26 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
27 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
28 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
29 2914759650 Rhizosphaericola mali Isolate Rhizosphere
30 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
31 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
32 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
33 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
34 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
35 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
36 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
37 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
38 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
39 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
40 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
41 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
42 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
43 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
44 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
45 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
46 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
47 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
48 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
49 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
50 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
51 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
52 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
53 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
54 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
55 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
56 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
57 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
58 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
59 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
60 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
61 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
62 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
63 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
64 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
65 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
66 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
67 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
68 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
69 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
70 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
71 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
72 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
73 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
74 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
75 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
76 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
77 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
78 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
79 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
80 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
81 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
82 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
83 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
84 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
85 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
86 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
87 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
88 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
89 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
90 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
91 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
92 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
93 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
94 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
95 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
96 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
97 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
98 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
100 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
120 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
121 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
122 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
123 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
124 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
125 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
126 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
127 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
128 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
129 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
130 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
131 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
132 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
133 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
134 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
135 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
136 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
137 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
139 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
140 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
141 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
142 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
143 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
144 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
145 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
146 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
147 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
148 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
149 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
150 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
151 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
152 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
153 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
154 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
155 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
156 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
157 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
158 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
159 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
160 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
161 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
162 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
163 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
164 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
165 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
166 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
167 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
168 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
169 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
170 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
171 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
172 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
173 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
174 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
175 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
176 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
177 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
178 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
179 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
180 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
181 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
182 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
183 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
184 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
185 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
186 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
187 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
188 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
189 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
190 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
191 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
192 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
193 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
194 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
195 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
196 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
197 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
198 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
199 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
200 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.73
Metatranscriptomes 0
Isolates 15.27

Biome Distribution

Category Percentage (%)
Aerial Root 0.76
Bulb 0
Endosphere 12.21
Nodule 0.38
Rhizoplane 1.53
Rhizosphere 69.85
Stem 0
Stem Tuber 0
Unclassified 15.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2770014 2162886007 Bacteria 2971
2 JGI24741J21665_1000110 3300001915 Bacteria 21968
3 rootH1_10147339 3300003316 Bacteria 3241
4 rootH2_10301328 3300003320 Bacteria 1765
5 rootL2_10156138 3300003322 Bacteria 3690
6 rootH1_10026732 3300003323 Bacteria 35530
7 rootH1_10239683 3300003323 Bacteria 5853
8 rootH1_10299875 3300003323 Bacteria 3533
9 Ga0055536_1000039 3300003781 Bacteria 131503
10 Ga0055530_10003448 3300003791 Bacteria 8989
11 Ga0055530_10008087 3300003791 Bacteria 4282
12 Ga0055531_10000136 3300003794 Bacteria 83698
13 Ga0055531_10006306 3300003794 Bacteria 6754
14 Ga0055531_10018480 3300003794 Bacteria 2873
15 Ga0065165_1000529 3300005262 Bacteria 58349
16 Ga0065165_1000532 3300005262 Bacteria 58082
17 Ga0065714_10064782 3300005288 Bacteria 19009
18 Ga0065704_10071917 3300005289 Bacteria 9609
19 Ga0065704_10073620 3300005289 Bacteria 6949
20 Ga0070683_100000002 3300005329 Bacteria 427530
21 Ga0070683_100001002 3300005329 Bacteria 21162
22 Ga0070683_100018073 3300005329 Bacteria 6238
23 Ga0070677_10047140 3300005333 Bacteria 1726
24 Ga0070682_100000344 3300005337 Bacteria 31960
25 Ga0068868_100001083 3300005338 Bacteria 18640
26 Ga0070668_100012436 3300005347 Bacteria 6339
27 Ga0070659_100058172 3300005366 Bacteria 3050
28 Ga0070678_100035111 3300005456 Bacteria 3498
29 Ga0070662_100000030 3300005457 Bacteria 81418
30 Ga0070681_10155810 3300005458 Bacteria 2209
31 Ga0070684_100000007 3300005535 Bacteria 217174
32 Ga0068853_100046729 3300005539 Bacteria 3713
33 Ga0070672_100200353 3300005543 Bacteria 1669
34 Ga0070665_100089628 3300005548 Bacteria 3082
35 Ga0070665_100115589 3300005548 Bacteria 2686
36 Ga0068855_100001758 3300005563 Bacteria 27060
37 Ga0070664_100048655 3300005564 Bacteria 3583
38 Ga0070664_100177445 3300005564 Bacteria 1892
39 Ga0081539_10008684 3300005985 Bacteria 8744
40 Ga0075365_10066257 3300006038 Bacteria 2423
41 Ga0075368_10036149 3300006042 Bacteria 1929
42 Ga0097621_100030633 3300006237 Bacteria 4261
43 Ga0075434_100105797 3300006871 Bacteria 2823
44 Ga0105250_10011273 3300009092 Bacteria 3708
45 Ga0105240_10000134 3300009093 Bacteria 151778
46 Ga0105240_10012196 3300009093 Bacteria 11889
47 Ga0105240_10062997 3300009093 Bacteria 4615
48 Ga0105243_10000004 3300009148 Bacteria 601266
49 Ga0105243_10000149 3300009148 Bacteria 79865
50 Ga0105241_10004838 3300009174 Bacteria 9928
51 Ga0105242_10021912 3300009176 Bacteria 5021
52 Ga0105242_10034573 3300009176 Bacteria 4052
53 Ga0105248_10043195 3300009177 Bacteria 5054
54 Ga0105248_10045529 3300009177 Bacteria 4919
55 Ga0105237_10002763 3300009545 Bacteria 21342
56 Ga0105238_10129756 3300009551 Bacteria 2499
57 Ga0105249_10015556 3300009553 Bacteria 6737
58 Ga0105239_10083182 3300010375 Bacteria 3524
59 Ga0105246_10024392 3300011119 Bacteria 3930
60 Ga0157373_10000020 3300013100 Bacteria 166079
61 Ga0157373_10000205 3300013100 Bacteria 48796
62 Ga0157373_10075050 3300013100 Bacteria 2386
63 Ga0157371_10027489 3300013102 Bacteria 4126
64 Ga0157370_10002098 3300013104 Bacteria 24348
65 Ga0157370_10099926 3300013104 Bacteria 2719
66 Ga0157369_10000019 3300013105 Bacteria 243437
67 Ga0157369_10041788 3300013105 Bacteria 5003
68 Ga0157369_10124921 3300013105 Bacteria 2729
69 Ga0157374_10000203 3300013296 Bacteria 54699
70 Ga0157378_10018908 3300013297 Bacteria 6055
71 Ga0163162_10001415 3300013306 Bacteria 22313
72 Ga0157372_10020232 3300013307 Bacteria 7177
73 Ga0157375_10000684 3300013308 Bacteria 30041
74 Ga0157375_10371965 3300013308 Bacteria 1595
75 Ga0182008_10000005 3300014497 Bacteria 386556
76 Ga0157379_10021834 3300014968 Bacteria 5671
77 Ga0157376_10000101 3300014969 Bacteria 62612
78 Ga0182006_1000001 3300015261 Bacteria 1091090
79 Ga0209026_1005234 3300025250 Bacteria 3547
80 Ga0209676_1000094 3300025292 Bacteria 246535
81 Ga0209758_1000924 3300025297 Bacteria 39688
82 Ga0209758_1001933 3300025297 Bacteria 22492
83 Ga0209758_1002247 3300025297 Bacteria 20049
84 Ga0209050_1000049 3300025298 Bacteria 364096
85 Ga0209050_1000205 3300025298 Bacteria 132077
86 Ga0209050_1019209 3300025298 Bacteria 2609
87 Ga0209257_1000110 3300025304 Bacteria 237242
88 Ga0209257_1000692 3300025304 Bacteria 52346
89 Ga0209257_1008831 3300025304 Bacteria 5572
90 Ga0207696_1008760 3300025711 Bacteria 3833
91 Ga0207647_10000247 3300025904 Bacteria 44109
92 Ga0207647_10019429 3300025904 Bacteria 4570
93 Ga0207654_10002966 3300025911 Bacteria 8605
94 Ga0207695_10000010 3300025913 Bacteria 981919
95 Ga0207695_10003554 3300025913 Bacteria 21834
96 Ga0207671_10000126 3300025914 Bacteria 118967
97 Ga0207657_10027705 3300025919 Bacteria 5186
98 Ga0207690_10104642 3300025932 Bacteria 2028
99 Ga0207706_10000129 3300025933 Bacteria 81280
100 Ga0207706_10024270 3300025933 Bacteria 5435
101 Ga0207709_10000010 3300025935 Bacteria 601305
102 Ga0207709_10000044 3300025935 Bacteria 241642
103 Ga0207661_10000003 3300025944 Bacteria 611941
104 Ga0207661_10011880 3300025944 Bacteria 6324
105 Ga0207661_10080950 3300025944 Bacteria 2681
106 Ga0207661_10152157 3300025944 Bacteria 2001
107 Ga0207679_10080542 3300025945 Bacteria 2486
108 Ga0207712_10014178 3300025961 Bacteria 5118
109 Ga0207677_10000003 3300026023 Bacteria 450061
110 Ga0207639_10233026 3300026041 Bacteria 1597
111 Ga0207708_10101810 3300026075 Bacteria 2224
112 Ga0207674_10126207 3300026116 Bacteria 2525
113 Ga0268266_10056876 3300028379 Bacteria 3364
114 Ga0265319_1000677 3300028563 Bacteria 22228
115 Ga0307517_10046798 3300028786 Bacteria 4501
116 Ga0307515_10032477 3300028794 Bacteria 8647
117 Ga0265338_10014780 3300028800 Bacteria 8643
118 Ga0265320_10000059 3300031240 Bacteria 102018
119 Ga0265320_10003591 3300031240 Bacteria 10368
120 Ga0265339_10003733 3300031249 Bacteria 10620
121 Ga0265331_10055089 3300031250 Unclassified 1892
122 Ga0265327_10000006 3300031251 Bacteria 693716
123 Ga0265327_10000508 3300031251 Bacteria 67561
124 Ga0265316_10033574 3300031344 Bacteria 4177
125 Ga0265313_10000869 3300031595 Bacteria 30503
126 Ga0307516_10034306 3300031730 Bacteria 5101
127 Ga0307412_10000006 3300031911 Bacteria 506878
128 Ga0307412_10000299 3300031911 Bacteria 31519
129 Ga0307412_10000940 3300031911 Bacteria 16662
130 Ga0307416_100000021 3300032002 Bacteria 189730
131 Ga0307414_10029221 3300032004 Bacteria 3585
132 Ga0307414_10102064 3300032004 Bacteria 2161
133 Ga0307510_10024940 3300033180 Bacteria 6904
134 Ga0373955_0091507 3300035172 Bacteria 1734
135 Ga0373927_0049674 3300035695 Bacteria 2712
136 Ga0373937_0007817 3300036401 Bacteria 9269
137 Ga0373937_0056010 3300036401 Bacteria 3620
138 Ga0373925_0044503 3300037068 Bacteria 3296
139 Ga0395905_0005322 3300037471 Bacteria 13159
140 Ga0395905_0176312 3300037471 Bacteria 2007
141 Ga0395901_0180525 3300038443 Bacteria 2214
142 Ga0400487_04617 3300039110 Bacteria 9683
143 Ga0436365_1505547 3300039437 Bacteria 55840
144 Ga0439465_0000064 3300041413 Bacteria 22977
145 Ga0439445_0001107 3300042004 Bacteria 5759
146 Ga0451577_0148273 3300042876 Bacteria 2110
147 Ga0466969_0083597 3300044656 Bacteria 1520
148 Ga0453684_0043300 3300044712 Bacteria 6052
149 Ga0453684_0066276 3300044712 Bacteria 4599
150 Ga0453684_0114164 3300044712 Bacteria 3275
151 Ga0451576_0000345 3300045051 Bacteria 112164
152 Ga0451576_0017108 3300045051 Bacteria 7977
153 Ga0495627_000012 3300046453 Bacteria 345654
154 Ga0495627_002232 3300046453 Bacteria 9600
155 Ga0495592_0006566 3300046454 Bacteria 8667
156 Ga0495590_0000535 3300046457 Bacteria 18196
157 Ga0495606_0004494 3300046507 Bacteria 13905
158 Ga0495610_0000005 3300046512 Bacteria 924111
159 Ga0495610_0001771 3300046512 Bacteria 18879
160 Ga0495618_0021573 3300046514 Bacteria 3972
161 Ga0495628_0012828 3300046516 Bacteria 7057
162 Ga0495631_0001314 3300046518 Bacteria 15218
163 Ga0495632_0004829 3300046519 Bacteria 9055
164 Ga0495643_0033612 3300046522 Bacteria 2836
165 Ga0495663_0000018 3300046525 Bacteria 131320
166 Ga0495654_0000003 3300046530 Bacteria 863485
167 Ga0495654_0037423 3300046530 Bacteria 2433
168 Ga0495609_0000003 3300046538 Bacteria 711547
169 Ga0495633_0000001 3300046558 Bacteria 801972
170 Ga0495633_0000255 3300046558 Bacteria 62923
171 Ga0495668_0000105 3300046616 Bacteria 133981
172 Ga0495668_0015692 3300046616 Bacteria 4415
173 Ga0495668_0015704 3300046616 Bacteria 4413
174 Ga0495625_0000267 3300046660 Bacteria 81137
175 Ga0495658_0002977 3300046683 Bacteria 8485
176 Ga0495613_0010671 3300046689 Bacteria 6816
177 Ga0495660_0003436 3300046810 Bacteria 9788
178 Ga0495660_0024542 3300046810 Bacteria 3433
179 Ga0495636_0000116 3300047318 Bacteria 33107
180 Ga0495687_000516 3300047443 Bacteria 46369
181 Ga0495684_0010132 3300047471 Bacteria 7289
182 Ga0495686_0000122 3300047472 Bacteria 162732
183 Ga0495686_0001551 3300047472 Bacteria 24521
184 Ga0495686_0001945 3300047472 Bacteria 20560
185 Ga0496101_0071854 3300048904 Bacteria 2538
186 Ga0496105_0138383 3300048908 Bacteria 2005
187 Ga0496114_0000584 3300048917 Bacteria 26962
188 Ga0496115_0136825 3300048918 Bacteria 2020
189 Ga0496116_0000051 3300048919 Bacteria 305038
190 Ga0496116_0007658 3300048919 Bacteria 9527
191 Ga0496117_0000007 3300048920 Bacteria 720505
192 Ga0496117_0001577 3300048920 Bacteria 32356
193 Ga0496118_0103923 3300048921 Bacteria 1909
194 Ga0496119_0000028 3300048922 Bacteria 244677
195 Ga0496121_0039784 3300048924 Bacteria 4136
196 Ga0496122_0000181 3300048925 Bacteria 148788
197 Ga0496122_0000368 3300048925 Bacteria 96829
198 Ga0496122_0000406 3300048925 Bacteria 91452
199 Ga0496122_0002602 3300048925 Bacteria 25293
200 Ga0496122_0012831 3300048925 Bacteria 8286
201 Ga0496123_0002171 3300048926 Bacteria 25052
202 Ga0496123_0010184 3300048926 Bacteria 8344
203 Ga0496124_0004235 3300048927 Bacteria 16877
204 Ga0496125_0017506 3300048928 Bacteria 6828
205 Ga0496126_0016372 3300048929 Bacteria 7415
206 Ga0501067_0004136 3300049583 Bacteria 8006
207 Ga0501241_000001 3300049758 Bacteria 233688
208 Ga0501269_000071 3300049766 Bacteria 31699
209 Ga0501035_0157860 3300049822 Bacteria 1965
210 nmdc:mga03683_13910_c1 3300050489 Bacteria 2968
211 nmdc:mga0yw44_57859_c1 3300050492 Bacteria 2366
212 Ga0500635_0047280 3300053080 Bacteria 1462
213 Ga0500578_0000960 3300053086 Bacteria 31970
214 Ga0500647_0015627 3300053091 Bacteria 3475
215 Ga0500555_004942 3300053103 Bacteria 3782
216 Ga0500562_003998 3300053108 Bacteria 3717
217 Ga0500595_016253 3300053119 Bacteria 2775
218 Ga0500642_0071455 3300053130 Bacteria 1580
219 Ga0500622_0001594 3300053156 Bacteria 17841
220 Ga0500622_0014412 3300053156 Bacteria 4245
221 Ga0500645_006308 3300053730 Bacteria 4249
222 Ga0501082_0015050 3300060353 Bacteria 6666

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005985 Ga0081539_10008684 Ga0081539_100086845 390
2 3300006871 Ga0075434_100105797 Ga0075434_1001057974 396
3 3300028786 Ga0307517_10046798 Ga0307517_100467982 408
4 3300028800 Ga0265338_10014780 Ga0265338_100147805 408
5 3300026116 Ga0207674_10126207 Ga0207674_101262072 412
6 3300035172 Ga0373955_0091507 Ga0373955_0091507_266_1672 417
7 3300005329 Ga0070683_100000002 Ga0070683_100000002193 419
8 3300005535 Ga0070684_100000007 Ga0070684_100000007193 419
9 3300025250 Ga0209026_1005234 Ga0209026_10052343 425
10 3300036401 Ga0373937_0007817 Ga0373937_0007817_5912_7366 427
11 3300053080 Ga0500635_0047280 Ga0500635_0047280_23_1351 429
12 3300047318 Ga0495636_0000116 Ga0495636_0000116_20438_21787 430
13 3300053130 Ga0500642_0071455 Ga0500642_0071455_103_1482 433
14 3300046683 Ga0495658_0002977 Ga0495658_0002977_13_1377 434
15 3300049822 Ga0501035_0157860 Ga0501035_0157860_589_1935 438
16 3300044656 Ga0466969_0083597 Ga0466969_0083597_124_1503 439
17 3300031344 Ga0265316_10033574 Ga0265316_100335743 441
18 3300039110 Ga0400487_04617 Ga0400487_04617_1489_2862 442
19 3300005338 Ga0068868_100001083 Ga0068868_10000108312 444
20 3300026023 Ga0207677_10000003 Ga0207677_10000003324 444
21 3300046522 Ga0495643_0033612 Ga0495643_0033612_1066_2523 444
22 3300046530 Ga0495654_0037423 Ga0495654_0037423_376_1821 444
23 3300046616 Ga0495668_0015704 Ga0495668_0015704_1851_3308 444
24 3300046810 Ga0495660_0003436 Ga0495660_0003436_2370_3827 444
25 3300044712 Ga0453684_0043300 Ga0453684_0043300_296_1678 445
26 3300045051 Ga0451576_0017108 Ga0451576_0017108_6166_7548 445
27 3300037471 Ga0395905_0005322 Ga0395905_0005322_5296_6741 446
28 3300003781 Ga0055536_1000039 Ga0055536_100003996 448
29 3300003791 Ga0055530_10008087 Ga0055530_100080872 448
30 3300003794 Ga0055531_10000136 Ga0055531_1000013665 448
31 3300025292 Ga0209676_1000094 Ga0209676_1000094150 448
32 3300025298 Ga0209050_1000205 Ga0209050_100020598 448
33 3300025304 Ga0209257_1000110 Ga0209257_100011049 448
34 3300028794 Ga0307515_10032477 Ga0307515_100324771 448
35 3300046457 Ga0495590_0000535 Ga0495590_0000535_6763_8205 448
36 3300046518 Ga0495631_0001314 Ga0495631_0001314_10860_12302 448
37 3300047472 Ga0495686_0001551 Ga0495686_0001551_12158_13600 448
38 3300053086 Ga0500578_0000960 Ga0500578_0000960_29444_30886 448
39 3300053108 Ga0500562_003998 Ga0500562_003998_1101_2543 448
40 3300053156 Ga0500622_0001594 Ga0500622_0001594_10938_12380 448
41 3300046616 Ga0495668_0000105 Ga0495668_0000105_65878_67323 449
42 iso_pu_bacteria 2738543023 2739303566 449
43 iso_pu_bacteria 2852627209 2852629311 449
44 iso_pu_bacteria 2914759650 2914763676 449
45 iso_pu_bacteria 2919186247 2919190416 449
46 iso_pu_bacteria 2939664404 2939668697 449
47 iso_pu_bacteria 2739367651 2739590853 450
48 iso_pu_bacteria 2818991437 2819546508 450
49 iso_pu_bacteria 2849281842 2849286906 450
50 3300003791 Ga0055530_10003448 Ga0055530_100034482 451
51 3300003794 Ga0055531_10006306 Ga0055531_100063065 451
52 3300003794 Ga0055531_10018480 Ga0055531_100184805 451
53 3300005262 Ga0065165_1000532 Ga0065165_10005323 451
54 3300009093 Ga0105240_10062997 Ga0105240_100629973 451
55 3300025297 Ga0209758_1000924 Ga0209758_100092433 451
56 3300025298 Ga0209050_1000049 Ga0209050_10000498 451
57 3300025304 Ga0209257_1000692 Ga0209257_100069212 451
58 3300025304 Ga0209257_1008831 Ga0209257_10088316 451
59 3300048918 Ga0496115_0136825 Ga0496115_0136825_481_1920 451
60 3300053119 Ga0500595_016253 Ga0500595_016253_559_1995 451
61 3300053730 Ga0500645_006308 Ga0500645_006308_1687_3123 451
62 3300009177 Ga0105248_10045529 Ga0105248_100455293 452
63 3300039437 Ga0436365_1505547 Ga0436365_1505547_46650_48098 452
64 3300053091 Ga0500647_0015627 Ga0500647_0015627_1437_2879 452
65 3300005262 Ga0065165_1000529 Ga0065165_100052925 453
66 3300005458 Ga0070681_10155810 Ga0070681_101558101 453
67 3300005539 Ga0068853_100046729 Ga0068853_1000467294 453
68 3300013297 Ga0157378_10018908 Ga0157378_100189083 453
69 3300025297 Ga0209758_1002247 Ga0209758_100224714 453
70 3300025298 Ga0209050_1019209 Ga0209050_10192092 453
71 3300026041 Ga0207639_10233026 Ga0207639_102330261 453
72 3300035695 Ga0373927_0049674 Ga0373927_0049674_1223_2647 453
73 3300037068 Ga0373925_0044503 Ga0373925_0044503_1290_2714 453
74 3300037471 Ga0395905_0176312 Ga0395905_0176312_108_1550 453
75 3300046512 Ga0495610_0001771 Ga0495610_0001771_5125_6567 453
76 3300046616 Ga0495668_0015692 Ga0495668_0015692_1105_2562 453
77 3300053103 Ga0500555_004942 Ga0500555_004942_1357_2769 453
78 3300053156 Ga0500622_0014412 Ga0500622_0014412_2685_4127 453
79 3300005329 Ga0070683_100018073 Ga0070683_1000180733 454
80 3300005548 Ga0070665_100115589 Ga0070665_1001155892 454
81 3300009093 Ga0105240_10012196 Ga0105240_100121964 454
82 3300009545 Ga0105237_10002763 Ga0105237_100027633 454
83 3300009551 Ga0105238_10129756 Ga0105238_101297562 454
84 3300013100 Ga0157373_10000205 Ga0157373_1000020512 454
85 3300013105 Ga0157369_10041788 Ga0157369_100417886 454
86 3300025297 Ga0209758_1001933 Ga0209758_100193323 454
87 3300025904 Ga0207647_10019429 Ga0207647_100194294 454
88 3300025913 Ga0207695_10003554 Ga0207695_1000355411 454
89 3300025914 Ga0207671_10000126 Ga0207671_1000012687 454
90 3300025933 Ga0207706_10024270 Ga0207706_100242702 454
91 3300025944 Ga0207661_10000003 Ga0207661_10000003189 454
92 3300025944 Ga0207661_10080950 Ga0207661_100809502 454
93 3300028379 Ga0268266_10056876 Ga0268266_100568764 454
94 3300031240 Ga0265320_10000059 Ga0265320_100000598 454
95 3300031730 Ga0307516_10034306 Ga0307516_100343065 454
96 3300044712 Ga0453684_0066276 Ga0453684_0066276_844_2241 454
97 3300050489 nmdc:mga03683_13910_c1 nmdc:mga03683_13910_c1_574_1989 454
98 iso_pu_bacteria 2511231000 2511231632 454
99 iso_pu_bacteria 2582581281 2585157835 454
100 iso_pu_bacteria 2582581282 2585162135 454
101 iso_pu_bacteria 2582581873 2585426742 454
102 iso_pu_bacteria 2585428045 2587679301 454
103 iso_pu_bacteria 2585428095 2587866139 454
104 iso_pu_bacteria 2585428115 2587944409 454
105 iso_pu_bacteria 2585428183 2588215411 454
106 iso_pu_bacteria 2585428185 2588226098 454
107 iso_pu_bacteria 2585428187 2588232263 454
108 iso_pu_bacteria 2588254255 2590603702 454
109 iso_pu_bacteria 2721755487 2722727686 454
110 iso_pu_bacteria 2738541273 2738698729 454
111 iso_pu_bacteria 2738543014 2739253055 454
112 iso_pu_bacteria 2739367874 2740059997 454
113 iso_pu_bacteria 2765235839 2765575186 454
114 iso_pu_bacteria 2772190705 2772607273 454
115 iso_pu_bacteria 2775506739 2775674721 454
116 iso_pu_bacteria 2842083920 2842084562 454
117 iso_pu_bacteria 2871720351 2871723131 454
118 iso_pu_bacteria 2904780799 2904781625 454
119 iso_pu_bacteria 2905999023 2905999462 454
120 iso_pu_bacteria 2919097161 2919098339 454
121 iso_pu_bacteria 2919177583 2919177665 454
122 iso_pu_bacteria 2919399522 2919401725 454
123 iso_pu_bacteria 2945924605 2945925242 454
124 iso_pu_bacteria 2977243572 2977244032 454
125 iso_pu_bacteria 2984572630 2984574025 454
126 iso_pu_bacteria 2984606641 2984607470 454
127 iso_pu_bacteria 2993372514 2993375538 454
128 iso_pu_bacteria 2993480792 2993482409 454
129 3300003323 rootH1_10299875 rootH1_102998754 455
130 3300005563 Ga0068855_100001758 Ga0068855_10000175813 455
131 3300014968 Ga0157379_10021834 Ga0157379_100218344 455
132 3300025932 Ga0207690_10104642 Ga0207690_101046421 455
133 3300033180 Ga0307510_10024940 Ga0307510_100249406 455
134 3300042876 Ga0451577_0148273 Ga0451577_0148273_252_1667 455
135 3300046454 Ga0495592_0006566 Ga0495592_0006566_3363_4778 455
136 3300046516 Ga0495628_0012828 Ga0495628_0012828_4668_6083 455
137 3300047443 Ga0495687_000516 Ga0495687_000516_28634_30031 455
138 3300003320 rootH2_10301328 rootH2_103013282 456
139 3300005333 Ga0070677_10047140 Ga0070677_100471401 456
140 3300005456 Ga0070678_100035111 Ga0070678_1000351114 456
141 3300005457 Ga0070662_100000030 Ga0070662_10000003051 456
142 3300005543 Ga0070672_100200353 Ga0070672_1002003531 456
143 3300005548 Ga0070665_100089628 Ga0070665_1000896283 456
144 3300005564 Ga0070664_100048655 Ga0070664_1000486553 456
145 3300006038 Ga0075365_10066257 Ga0075365_100662573 456
146 3300006042 Ga0075368_10036149 Ga0075368_100361492 456
147 3300009174 Ga0105241_10004838 Ga0105241_100048387 456
148 3300010375 Ga0105239_10083182 Ga0105239_100831823 456
149 3300011119 Ga0105246_10024392 Ga0105246_100243923 456
150 3300013100 Ga0157373_10075050 Ga0157373_100750503 456
151 3300013102 Ga0157371_10027489 Ga0157371_100274893 456
152 3300013296 Ga0157374_10000203 Ga0157374_1000020320 456
153 3300013307 Ga0157372_10020232 Ga0157372_100202326 456
154 3300025904 Ga0207647_10000247 Ga0207647_1000024715 456
155 3300025911 Ga0207654_10002966 Ga0207654_100029666 456
156 3300025919 Ga0207657_10027705 Ga0207657_100277053 456
157 3300025933 Ga0207706_10000129 Ga0207706_1000012939 456
158 3300025945 Ga0207679_10080542 Ga0207679_100805423 456
159 3300026075 Ga0207708_10101810 Ga0207708_101018101 456
160 3300050492 nmdc:mga0yw44_57859_c1 nmdc:mga0yw44_57859_c1_327_1760 456
161 3300003323 rootH1_10239683 rootH1_102396834 457
162 3300005366 Ga0070659_100058172 Ga0070659_1000581724 457
163 3300005564 Ga0070664_100177445 Ga0070664_1001774452 457
164 3300006237 Ga0097621_100030633 Ga0097621_1000306332 457
165 3300009176 Ga0105242_10021912 Ga0105242_100219124 457
166 3300009176 Ga0105242_10034573 Ga0105242_100345733 457
167 3300009177 Ga0105248_10043195 Ga0105248_100431953 457
168 3300013306 Ga0163162_10001415 Ga0163162_100014153 457
169 3300014969 Ga0157376_10000101 Ga0157376_100001017 457
170 3300025944 Ga0207661_10152157 Ga0207661_101521572 457
171 3300028563 Ga0265319_1000677 Ga0265319_100067712 457
172 3300031240 Ga0265320_10003591 Ga0265320_1000359111 457
173 3300031249 Ga0265339_10003733 Ga0265339_100037338 457
174 3300031251 Ga0265327_10000006 Ga0265327_10000006554 457
175 3300031595 Ga0265313_10000869 Ga0265313_1000086922 457
176 3300036401 Ga0373937_0056010 Ga0373937_0056010_1845_3374 457
177 3300038443 Ga0395901_0180525 Ga0395901_0180525_49_1473 457
178 3300044712 Ga0453684_0114164 Ga0453684_0114164_1644_3068 457
179 3300045051 Ga0451576_0000345 Ga0451576_0000345_37270_38694 457
180 3300046514 Ga0495618_0021573 Ga0495618_0021573_1928_3592 457
181 3300046689 Ga0495613_0010671 Ga0495613_0010671_4874_6403 457
182 3300047471 Ga0495684_0010132 Ga0495684_0010132_5531_7060 457
183 3300048904 Ga0496101_0071854 Ga0496101_0071854_221_1720 457
184 3300049583 Ga0501067_0004136 Ga0501067_0004136_2050_3483 457
185 3300060353 Ga0501082_0015050 Ga0501082_0015050_2342_3775 457
186 2162886007 SwRhRL2b_contig_2770014 SwRhRL2b_0432.00004310 458
187 3300001915 JGI24741J21665_1000110 JGI24741J21665_100011014 458
188 3300003316 rootH1_10147339 rootH1_101473392 458
189 3300003322 rootL2_10156138 rootL2_101561382 458
190 3300003323 rootH1_10026732 rootH1_1002673210 458
191 3300005288 Ga0065714_10064782 Ga0065714_100647823 458
192 3300005289 Ga0065704_10071917 Ga0065704_100719174 458
193 3300005289 Ga0065704_10073620 Ga0065704_100736205 458
194 3300005329 Ga0070683_100001002 Ga0070683_10000100212 458
195 3300005337 Ga0070682_100000344 Ga0070682_10000034434 458
196 3300005347 Ga0070668_100012436 Ga0070668_1000124362 458
197 3300009092 Ga0105250_10011273 Ga0105250_100112734 458
198 3300009093 Ga0105240_10000134 Ga0105240_1000013475 458
199 3300009148 Ga0105243_10000004 Ga0105243_10000004303 458
200 3300009148 Ga0105243_10000149 Ga0105243_1000014970 458
201 3300009553 Ga0105249_10015556 Ga0105249_100155566 458
202 3300013100 Ga0157373_10000020 Ga0157373_10000020144 458
203 3300013104 Ga0157370_10002098 Ga0157370_100020985 458
204 3300013104 Ga0157370_10099926 Ga0157370_100999262 458
205 3300013105 Ga0157369_10000019 Ga0157369_1000001967 458
206 3300013105 Ga0157369_10124921 Ga0157369_101249211 458
207 3300013308 Ga0157375_10000684 Ga0157375_100006849 458
208 3300013308 Ga0157375_10371965 Ga0157375_103719651 458
209 3300014497 Ga0182008_10000005 Ga0182008_10000005233 458
210 3300015261 Ga0182006_1000001 Ga0182006_1000001364 458
211 3300025711 Ga0207696_1008760 Ga0207696_10087603 458
212 3300025913 Ga0207695_10000010 Ga0207695_10000010315 458
213 3300025935 Ga0207709_10000010 Ga0207709_10000010305 458
214 3300025935 Ga0207709_10000044 Ga0207709_10000044208 458
215 3300025944 Ga0207661_10011880 Ga0207661_100118802 458
216 3300025961 Ga0207712_10014178 Ga0207712_100141784 458
217 3300031250 Ga0265331_10055089 Ga0265331_100550891 458
218 3300031251 Ga0265327_10000508 Ga0265327_1000050823 458
219 3300031911 Ga0307412_10000006 Ga0307412_10000006394 458
220 3300031911 Ga0307412_10000299 Ga0307412_1000029932 458
221 3300031911 Ga0307412_10000940 Ga0307412_1000094012 458
222 3300032002 Ga0307416_100000021 Ga0307416_100000021127 458
223 3300032004 Ga0307414_10029221 Ga0307414_100292215 458
224 3300032004 Ga0307414_10102064 Ga0307414_101020643 458
225 3300041413 Ga0439465_0000064 Ga0439465_0000064_14474_15877 458
226 3300042004 Ga0439445_0001107 Ga0439445_0001107_2651_4054 458
227 3300046453 Ga0495627_000012 Ga0495627_000012_151835_153238 458
228 3300046453 Ga0495627_002232 Ga0495627_002232_4641_6044 458
229 3300046507 Ga0495606_0004494 Ga0495606_0004494_9510_10952 458
230 3300046512 Ga0495610_0000005 Ga0495610_0000005_718068_719471 458
231 3300046519 Ga0495632_0004829 Ga0495632_0004829_4337_5740 458
232 3300046525 Ga0495663_0000018 Ga0495663_0000018_51440_52843 458
233 3300046530 Ga0495654_0000003 Ga0495654_0000003_292850_294253 458
234 3300046538 Ga0495609_0000003 Ga0495609_0000003_316021_317424 458
235 3300046558 Ga0495633_0000001 Ga0495633_0000001_395970_397373 458
236 3300046558 Ga0495633_0000255 Ga0495633_0000255_26012_27415 458
237 3300046660 Ga0495625_0000267 Ga0495625_0000267_45808_47211 458
238 3300046810 Ga0495660_0024542 Ga0495660_0024542_1124_2527 458
239 3300047472 Ga0495686_0000122 Ga0495686_0000122_138513_139916 458
240 3300047472 Ga0495686_0001945 Ga0495686_0001945_10045_11448 458
241 3300048908 Ga0496105_0138383 Ga0496105_0138383_525_1928 458
242 3300048917 Ga0496114_0000584 Ga0496114_0000584_16534_17940 458
243 3300048919 Ga0496116_0000051 Ga0496116_0000051_142935_144338 458
244 3300048919 Ga0496116_0007658 Ga0496116_0007658_3224_4627 458
245 3300048920 Ga0496117_0000007 Ga0496117_0000007_575622_577025 458
246 3300048920 Ga0496117_0001577 Ga0496117_0001577_2264_3667 458
247 3300048921 Ga0496118_0103923 Ga0496118_0103923_303_1706 458
248 3300048922 Ga0496119_0000028 Ga0496119_0000028_143379_144782 458
249 3300048924 Ga0496121_0039784 Ga0496121_0039784_1557_2960 458
250 3300048925 Ga0496122_0000181 Ga0496122_0000181_140526_141929 458
251 3300048925 Ga0496122_0000368 Ga0496122_0000368_68846_70249 458
252 3300048925 Ga0496122_0000406 Ga0496122_0000406_21929_23332 458
253 3300048925 Ga0496122_0002602 Ga0496122_0002602_1956_3359 458
254 3300048925 Ga0496122_0012831 Ga0496122_0012831_1868_3271 458
255 3300048926 Ga0496123_0002171 Ga0496123_0002171_21929_23332 458
256 3300048926 Ga0496123_0010184 Ga0496123_0010184_6851_8254 458
257 3300048927 Ga0496124_0004235 Ga0496124_0004235_8595_9998 458
258 3300048928 Ga0496125_0017506 Ga0496125_0017506_2575_3978 458
259 3300048929 Ga0496126_0016372 Ga0496126_0016372_4132_5571 458
260 3300049758 Ga0501241_000001 Ga0501241_000001_206355_207758 458
261 3300049766 Ga0501269_000071 Ga0501269_000071_20253_21656 458
262 iso_pu_bacteria 2946019816 2946023610 458

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF23545

85

129

0.96

PF04055

Radical_SAM

Radical SAM superfamily

178

341

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7tom-assembly1.cif.gz_A x-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (gdgt-mas) from methanocaldococcus jannaschii with bacterial lipid substrate analog, 5'deoxyadenosine, and methionine bound 0.8199 6 457
7tol-assembly1.cif.gz_A x-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (gdgt-mas) from methanocaldococcus jannaschii with archaeal lipid, 5'deoxyadenosine, and methionine bound 0.8153 7 458
6efn-assembly1.cif.gz_A-2 structure of a ripp maturase, skfb 0.8133 94 295
7tom-assembly1.cif.gz_A x-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (gdgt-mas) from methanocaldococcus jannaschii with bacterial lipid substrate analog, 5'deoxyadenosine, and methionine bound 0.8079 6 457
7tol-assembly1.cif.gz_A x-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (gdgt-mas) from methanocaldococcus jannaschii with archaeal lipid, 5'deoxyadenosine, and methionine bound 0.8034 7 458
ID Description Score Start End Superfamily
af_O69696_93_337_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.932 101 328 3.20.20.70
af_Q58036_89_385_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8825 98 339 3.20.20.70
af_O69696_93_337_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8663 101 328 3.20.20.70
af_O33183_77_264_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8059 97 238 3.20.20.70
af_Q58195_29_372_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7831 97 295 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A432JFE5-F1-model_v4 Radical SAM protein 0.9762 1 59
AF-A0A3C0RVU5-F1-model_v4 Radical SAM protein 0.974 1 309 GO:0003824
GO:0046872
GO:0051536
AF-A0A521BNK7-F1-model_v4 4Fe-4S single cluster domain-containing protein 0.9732 1 203 GO:0003824
GO:0046872
GO:0051536
AF-A0A519X045-F1-model_v4 Radical SAM protein 0.9723 1 342 GO:0003824
GO:0046872
GO:0051536
AF-A0A101WL89-F1-model_v4 Radical SAM protein 0.9697 6 54

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pLDDT pTM Quality
80.16 0.83 High
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Predicted Structure (AlphaFold2)

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