F422675

General Info

Members Datasets Scaffolds Average Seq Length
362 247 345 577

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0000058|Ga0395900_0000058_90293_92095
Length 600
Sequence MLLIETRDCPPRTAFALEQAGVHPLLARLFAARGVRSPDELDDQLAQLLPPATLHGAAEAARGLADALQAGQRICVIADYDCDGATACAVALRGLAMLGAAPGTLRYVVPDRAVHGYGLTPAIVDLALRHEPQWLLTVDNGIASHAGVAHAKQRGLNVLVTDHHLPAVIDGACTLPAADVIVNPNQPGCGFESKHLAGVGVMFYVLLALRAELRARGAFDAQGDAASQGASTPTGGGQGEALPRGPGVKQPRLDALLDLVALGTVADVVKLDANNRRLVAQGLKRVRAGRMQPGLAALFAAAGRDASRASGFDFGFALGPRINAAGRLSDMTLGIECLTTDDPARAAQLAQQLDAINRERREVEAGMREQAEGLLESLMPEGEPPPAVVLFDPEFHEGVVGIVAGRLKDRLHRPTFVFALGADGALKGSGRSIPGFHLRDALDLVSKRHPGVLKKFGGHAMAAGCTLDEEHFDTFDAALQQVAAEWLDAATLQRRLRTDGPLPLQYFDAATVQVLDAQVWGQAFEPPLFCDEVEVVAQRLVGEKHLKLRLRHGGALRDAIWFGRVEPLPERVRLAYRLSLDEYQGQQRVQMVIEALAEGR

Samples

Sample ID Description Type Environment
1 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
2 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
3 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
4 2643221585 Pelomonas sp. Root662 Isolate Unclassified
5 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
6 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
7 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
8 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
9 2643221656 Pelomonas sp. Root405 Isolate Unclassified
10 2738541337 Pelomonas sp. BT06 Isolate Unclassified
11 2738543013 Variovorax sp. BT01 Isolate Unclassified
12 2831864461 Roseateles noduli HZ7 Isolate Nodule
13 2842733646 Variovorax sp. R-72446 Isolate Unclassified
14 2842747753 Variovorax sp. R-72060 Isolate Unclassified
15 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
16 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
17 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
18 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
19 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
20 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
21 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
22 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
23 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
24 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
25 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
26 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
27 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
28 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
29 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
30 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
31 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
32 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
33 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
34 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
35 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
36 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
37 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
38 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
39 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
40 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
41 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
42 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
43 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
44 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
45 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
46 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
47 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
48 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
49 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
50 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
51 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
52 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
53 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
54 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
55 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
56 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
57 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
58 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
59 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
60 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
61 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
62 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
63 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
64 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
65 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
66 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
67 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
68 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
69 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
70 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
71 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
72 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
73 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
74 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
80 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
81 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
82 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
83 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
84 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
85 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
86 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
87 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
90 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
92 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
93 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
95 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
97 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
98 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
99 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
102 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
132 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
133 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
134 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
135 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
139 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
140 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
141 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
142 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
143 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
144 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
145 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
146 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
147 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
148 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
149 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
150 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
151 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
152 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
153 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
154 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
155 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
156 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
157 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
158 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
159 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
160 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
161 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
162 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
163 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
164 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
165 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
166 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
167 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
168 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
169 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
170 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
171 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
172 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
173 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
174 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
175 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
176 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
177 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
178 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
179 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
180 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
181 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
182 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
183 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
184 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
185 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
186 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
187 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
188 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
189 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
190 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
191 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
192 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
193 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
194 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
195 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
196 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
197 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
198 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
199 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
200 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
201 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
202 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
203 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
204 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
205 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
206 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
207 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
208 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
209 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
210 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
211 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
212 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
213 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
214 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
215 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
216 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
217 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
218 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
219 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
220 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
221 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
222 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
223 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
224 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
225 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
226 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
227 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
228 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
229 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
230 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
231 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
232 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
233 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
234 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
235 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
236 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
237 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
238 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
239 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
240 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
241 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
242 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
243 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
244 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
245 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
246 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
247 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.3
Metatranscriptomes 0
Isolates 4.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.61
Nodule 1.38
Rhizoplane 4.14
Rhizosphere 57.46
Stem 0
Stem Tuber 0
Unclassified 17.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000612 3300002705 Bacteria 19787
2 JGI25154J39366_1003656 3300002738 Bacteria 3119
3 JGI25157J39369_1000312 3300002741 Bacteria 35057
4 rootH2_10016426 3300003320 Bacteria 10607
5 rootL2_10001692 3300003322 Bacteria 21923
6 rootL2_10001809 3300003322 Bacteria 9428
7 rootH1_10018817 3300003323 Bacteria 6068
8 rootH1_10019886 3300003323 Bacteria 3721
9 Ga0055539_1000392 3300003752 Bacteria 17667
10 Ga0055539_1001127 3300003752 Bacteria 5533
11 Ga0055533_1000024 3300003756 Bacteria 338067
12 Ga0055525_1000031 3300003759 Bacteria 314909
13 Ga0055535_1000156 3300003761 Bacteria 72919
14 Ga0055529_1000382 3300003763 Bacteria 48005
15 Ga0055526_1005393 3300003771 Bacteria 7361
16 Ga0055524_1000253 3300003775 Bacteria 55038
17 Ga0055524_1000814 3300003775 Bacteria 20618
18 Ga0055524_1002342 3300003775 Bacteria 9851
19 Ga0055534_1003987 3300003784 Bacteria 4435
20 Ga0055530_10000982 3300003791 Bacteria 22949
21 Ga0055540_1000011 3300003792 Bacteria 282927
22 Ga0055540_1000393 3300003792 Bacteria 35911
23 Ga0055531_10000168 3300003794 Bacteria 73798
24 Ga0055531_10002564 3300003794 Bacteria 12058
25 Ga0055531_10003021 3300003794 Bacteria 10919
26 Ga0065165_1000153 3300005262 Bacteria 120209
27 Ga0065165_1000569 3300005262 Bacteria 54781
28 Ga0065707_10090569 3300005295 Bacteria 4114
29 Ga0070658_10024448 3300005327 Bacteria 4845
30 Ga0070676_10023506 3300005328 Bacteria 3465
31 Ga0070670_100015056 3300005331 Bacteria 6637
32 Ga0070682_100025155 3300005337 Bacteria 3551
33 Ga0068868_100042658 3300005338 Bacteria 3541
34 Ga0068868_100084176 3300005338 Bacteria 2554
35 Ga0070660_100008878 3300005339 Bacteria 7048
36 Ga0070668_100066351 3300005347 Bacteria 2801
37 Ga0070669_100005917 3300005353 Bacteria 8825
38 Ga0070675_100009963 3300005354 Bacteria 7412
39 Ga0070671_100021554 3300005355 Bacteria 5263
40 Ga0070674_100000568 3300005356 Bacteria 18602
41 Ga0070674_100103158 3300005356 Bacteria 2082
42 Ga0070673_100018961 3300005364 Bacteria 4932
43 Ga0070659_100031949 3300005366 Bacteria 4080
44 Ga0070667_100161055 3300005367 Bacteria 1976
45 Ga0070700_100003835 3300005441 Bacteria 7790
46 Ga0070663_100000193 3300005455 Bacteria 30722
47 Ga0070678_100009269 3300005456 Bacteria 5952
48 Ga0070678_100047738 3300005456 Bacteria 3079
49 Ga0068867_100000018 3300005459 Bacteria 102056
50 Ga0068867_100002562 3300005459 Bacteria 12814
51 Ga0068867_100007834 3300005459 Bacteria 7550
52 Ga0070672_100022977 3300005543 Bacteria 4591
53 Ga0068855_100002198 3300005563 Bacteria 24123
54 Ga0070664_100068079 3300005564 Bacteria 3043
55 Ga0068857_100004386 3300005577 Bacteria 11926
56 Ga0068854_100010289 3300005578 Bacteria 6062
57 Ga0068856_100001613 3300005614 Bacteria 23596
58 Ga0068861_100037219 3300005719 Bacteria 3617
59 Ga0068851_10023637 3300005834 Bacteria 3006
60 Ga0068860_100000968 3300005843 Bacteria 31798
61 Ga0068862_100005951 3300005844 Bacteria 10158
62 Ga0075362_10018960 3300006177 Bacteria 2855
63 Ga0075370_10013158 3300006353 Bacteria 4391
64 Ga0075370_10014579 3300006353 Bacteria 4196
65 Ga0075370_10014890 3300006353 Bacteria 4155
66 Ga0075370_10041837 3300006353 Bacteria 2587
67 Ga0068865_100005385 3300006881 Bacteria 7754
68 Ga0099823_1000031 3300006944 Bacteria 69036
69 Ga0079104_1000465 3300006946 Bacteria 45434
70 Ga0105240_10003836 3300009093 Bacteria 23255
71 Ga0105240_10048604 3300009093 Bacteria 5360
72 Ga0105243_10000396 3300009148 Bacteria 46054
73 Ga0105243_10014462 3300009148 Bacteria 5974
74 Ga0105243_10032092 3300009148 Bacteria 4054
75 Ga0105237_10001634 3300009545 Bacteria 29121
76 Ga0105239_10002435 3300010375 Bacteria 23714
77 Ga0105239_10057285 3300010375 Bacteria 4275
78 Ga0157319_1000016 3300012497 Bacteria 127256
79 Ga0157369_10213147 3300013105 Bacteria 2024
80 Ga0157378_10003473 3300013297 Bacteria 13989
81 Ga0157378_10191148 3300013297 Bacteria 1931
82 Ga0163162_10006659 3300013306 Bacteria 11202
83 Ga0163162_10032818 3300013306 Bacteria 5156
84 Ga0157375_10071564 3300013308 Bacteria 3482
85 Ga0157380_10028271 3300014326 Bacteria 4273
86 Ga0182008_10000287 3300014497 Bacteria 39636
87 Ga0157377_10000051 3300014745 Bacteria 90204
88 Ga0157379_10025397 3300014968 Bacteria 5263
89 Ga0157379_10044446 3300014968 Bacteria 3965
90 Ga0157379_10071101 3300014968 Bacteria 3113
91 Ga0157376_10039970 3300014969 Bacteria 3831
92 Ga0183362_10005 3300015683 Bacteria 437616
93 Ga0163161_10021312 3300017792 Bacteria 4556
94 Ga0213872_10000049 3300021361 Bacteria 109094
95 Ga0213872_10000058 3300021361 Bacteria 100531
96 Ga0213872_10000102 3300021361 Bacteria 79440
97 Ga0213872_10000150 3300021361 Bacteria 63730
98 Ga0213872_10005350 3300021361 Bacteria 6626
99 Ga0213872_10008431 3300021361 Bacteria 4990
100 Ga0213872_10009186 3300021361 Bacteria 4751
101 Ga0209674_100007 3300025226 Bacteria 1077082
102 Ga0209563_100044 3300025230 Bacteria 396812
103 Ga0209563_100060 3300025230 Bacteria 284876
104 Ga0207427_100282 3300025231 Bacteria 37116
105 Ga0209258_100608 3300025242 Bacteria 28992
106 Ga0209258_101271 3300025242 Bacteria 9530
107 Ga0209646_1000056 3300025246 Bacteria 269860
108 Ga0209026_1000009 3300025250 Bacteria 531812
109 Ga0209677_100088 3300025253 Bacteria 108817
110 Ga0209677_100112 3300025253 Bacteria 85460
111 Ga0209677_102141 3300025253 Bacteria 7733
112 Ga0209759_1000035 3300025256 Bacteria 264254
113 Ga0209759_1005260 3300025256 Bacteria 4588
114 Ga0209759_1007594 3300025256 Bacteria 3470
115 Ga0209455_1000108 3300025272 Bacteria 193021
116 Ga0209673_1002426 3300025273 Bacteria 12963
117 Ga0209673_1007081 3300025273 Bacteria 5258
118 Ga0209130_1010334 3300025284 Bacteria 2580
119 Ga0209675_1001004 3300025291 Bacteria 17745
120 Ga0209564_1000008 3300025295 Bacteria 953227
121 Ga0209050_1000532 3300025298 Bacteria 63063
122 Ga0209050_1007448 3300025298 Bacteria 6132
123 Ga0209050_1009460 3300025298 Bacteria 4983
124 Ga0209256_1000113 3300025299 Bacteria 175296
125 Ga0209256_1000579 3300025299 Bacteria 52079
126 Ga0209256_1001555 3300025299 Bacteria 22789
127 Ga0209051_1000020 3300025303 Bacteria 508628
128 Ga0209051_1001397 3300025303 Bacteria 20777
129 Ga0209051_1002778 3300025303 Bacteria 12067
130 Ga0209051_1009542 3300025303 Bacteria 4992
131 Ga0209051_1009578 3300025303 Bacteria 4978
132 Ga0209257_1000021 3300025304 Bacteria 771986
133 Ga0209257_1000085 3300025304 Bacteria 291117
134 Ga0209257_1000984 3300025304 Bacteria 38671
135 Ga0209257_1004760 3300025304 Bacteria 10135
136 Ga0207645_10055845 3300025907 Bacteria 2521
137 Ga0207695_10020987 3300025913 Bacteria 7463
138 Ga0207695_10023098 3300025913 Bacteria 7038
139 Ga0207649_10001388 3300025920 Bacteria 14348
140 Ga0207681_10005519 3300025923 Bacteria 7769
141 Ga0207650_10000265 3300025925 Bacteria 55786
142 Ga0207659_10001160 3300025926 Bacteria 15700
143 Ga0207659_10056530 3300025926 Bacteria 2811
144 Ga0207687_10094188 3300025927 Bacteria 2191
145 Ga0207644_10027312 3300025931 Bacteria 3942
146 Ga0207644_10086782 3300025931 Bacteria 2324
147 Ga0207690_10033018 3300025932 Bacteria 3325
148 Ga0207706_10001386 3300025933 Bacteria 24177
149 Ga0207709_10002211 3300025935 Bacteria 12411
150 Ga0207709_10004398 3300025935 Bacteria 8155
151 Ga0207669_10005356 3300025937 Bacteria 5748
152 Ga0207704_10002533 3300025938 Bacteria 8238
153 Ga0207691_10000390 3300025940 Bacteria 43939
154 Ga0207691_10015487 3300025940 Bacteria 7249
155 Ga0207679_10000825 3300025945 Bacteria 19928
156 Ga0207679_10061284 3300025945 Bacteria 2800
157 Ga0207667_10004482 3300025949 Bacteria 17103
158 Ga0207651_10003561 3300025960 Bacteria 7656
159 Ga0207651_10012513 3300025960 Bacteria 4807
160 Ga0207658_10013014 3300025986 Bacteria 5682
161 Ga0207658_10021329 3300025986 Bacteria 4496
162 Ga0207658_10115413 3300025986 Bacteria 2131
163 Ga0207677_10049655 3300026023 Bacteria 2833
164 Ga0207677_10102533 3300026023 Bacteria 2110
165 Ga0207639_10142575 3300026041 Bacteria 1998
166 Ga0207678_10000651 3300026067 Bacteria 31871
167 Ga0207708_10010493 3300026075 Bacteria 6877
168 Ga0207702_10001270 3300026078 Bacteria 25363
169 Ga0207648_10000060 3300026089 Bacteria 102225
170 Ga0207648_10000789 3300026089 Bacteria 35679
171 Ga0207648_10005196 3300026089 Bacteria 13182
172 Ga0207648_10027223 3300026089 Bacteria 5078
173 Ga0207648_10027605 3300026089 Bacteria 5039
174 Ga0207674_10004701 3300026116 Bacteria 16372
175 Ga0207674_10151625 3300026116 Bacteria 2275
176 Ga0207675_100004863 3300026118 Bacteria 12944
177 Ga0207683_10041776 3300026121 Bacteria 4004
178 Ga0209281_1000195 3300027111 Bacteria 139144
179 Ga0209389_1006709 3300027296 Bacteria 10042
180 Ga0209971_1007105 3300027682 Bacteria 2655
181 Ga0209974_10003663 3300027876 Bacteria 5518
182 Ga0268266_10067671 3300028379 Bacteria 3091
183 Ga0268265_10044429 3300028380 Bacteria 3308
184 Ga0268264_10094635 3300028381 Bacteria 2583
185 Ga0265336_10000039 3300028666 Bacteria 149376
186 Ga0307517_10009915 3300028786 Bacteria 13416
187 Ga0307515_10000026 3300028794 Bacteria 382411
188 Ga0307515_10000040 3300028794 Bacteria 322704
189 Ga0307515_10000090 3300028794 Bacteria 215043
190 Ga0307515_10000132 3300028794 Bacteria 176547
191 Ga0307515_10010976 3300028794 Bacteria 17264
192 Ga0307515_10015462 3300028794 Bacteria 14055
193 Ga0307515_10027450 3300028794 Bacteria 9731
194 Ga0307515_10040148 3300028794 Bacteria 7410
195 Ga0307515_10052317 3300028794 Bacteria 6060
196 Ga0307515_10065375 3300028794 Bacteria 5063
197 Ga0307515_10110270 3300028794 Bacteria 3223
198 Ga0265324_10000223 3300029957 Bacteria 43654
199 Ga0307512_10037028 3300030522 Bacteria 4127
200 Ga0265330_10000062 3300031235 Bacteria 95409
201 Ga0265332_10000001 3300031238 Bacteria 863783
202 Ga0265328_10020225 3300031239 Bacteria 2550
203 Ga0265325_10001489 3300031241 Bacteria 16484
204 Ga0265331_10003349 3300031250 Bacteria 10403
205 Ga0265327_10000328 3300031251 Bacteria 90489
206 Ga0265327_10012542 3300031251 Bacteria 5706
207 Ga0307513_10002364 3300031456 Bacteria 26216
208 Ga0307513_10012382 3300031456 Bacteria 10536
209 Ga0307513_10078658 3300031456 Bacteria 3410
210 Ga0307513_10104847 3300031456 Bacteria 2838
211 Ga0307513_10107424 3300031456 Bacteria 2794
212 Ga0307509_10000234 3300031507 Bacteria 89398
213 Ga0307509_10001098 3300031507 Bacteria 46348
214 Ga0307509_10090530 3300031507 Bacteria 3135
215 Ga0307408_100000008 3300031548 Bacteria 456355
216 Ga0307408_100078106 3300031548 Bacteria 2467
217 Ga0307508_10000882 3300031616 Bacteria 34942
218 Ga0307508_10001589 3300031616 Bacteria 25346
219 Ga0307514_10001111 3300031649 Bacteria 37525
220 Ga0307514_10004507 3300031649 Bacteria 12799
221 Ga0265314_10000145 3300031711 Bacteria 106541
222 Ga0307516_10000054 3300031730 Bacteria 126288
223 Ga0307516_10000398 3300031730 Bacteria 56825
224 Ga0307516_10001841 3300031730 Bacteria 29116
225 Ga0307516_10006176 3300031730 Bacteria 14099
226 Ga0307516_10010171 3300031730 Bacteria 10382
227 Ga0307405_10000483 3300031731 Bacteria 14957
228 Ga0307410_10004639 3300031852 Bacteria 7138
229 Ga0307406_10058854 3300031901 Bacteria 2471
230 Ga0307412_10064815 3300031911 Bacteria 2470
231 Ga0307414_10004474 3300032004 Bacteria 7593
232 Ga0307414_10011344 3300032004 Bacteria 5221
233 Ga0307414_10025241 3300032004 Bacteria 3804
234 Ga0307411_10000169 3300032005 Bacteria 20966
235 Ga0307507_10053810 3300033179 Bacteria 3840
236 Ga0307510_10015140 3300033180 Bacteria 9116
237 Ga0307510_10154560 3300033180 Bacteria 1904
238 Ga0373944_0021108 3300035089 Bacteria 1883
239 Ga0373939_0000052 3300035114 Bacteria 40835
240 Ga0373960_0000046 3300035121 Bacteria 16294
241 Ga0373931_0000306 3300035691 Bacteria 20645
242 Ga0373931_0005964 3300035691 Bacteria 5666
243 Ga0373931_0016512 3300035691 Bacteria 3635
244 Ga0373925_0014530 3300037068 Bacteria 5689
245 Ga0373925_0096940 3300037068 Bacteria 2261
246 Ga0395900_0000058 3300037418 Bacteria 206785
247 Ga0395905_0004785 3300037471 Bacteria 13982
248 Ga0395905_0010762 3300037471 Bacteria 8868
249 Ga0395901_0030251 3300038443 Bacteria 5578
250 Ga0436361_0018388 3300039447 Bacteria 44345
251 Ga0436361_0068556 3300039447 Bacteria 100895
252 Ga0436361_0082864 3300039447 Bacteria 107951
253 Ga0436361_0614815 3300039447 Bacteria 45728
254 Ga0436361_0747597 3300039447 Bacteria 9644
255 Ga0436361_0850324 3300039447 Bacteria 16256
256 Ga0439436_0000259 3300041404 Bacteria 12713
257 Ga0439439_0009127 3300041406 Bacteria 2353
258 Ga0439466_0001510 3300041411 Bacteria 9089
259 Ga0439465_0001093 3300041413 Bacteria 8688
260 Ga0439431_0001691 3300041997 Bacteria 4867
261 Ga0439445_0000922 3300042004 Bacteria 6238
262 Ga0439432_002127 3300042006 Bacteria 7458
263 Ga0439449_0000530 3300042007 Bacteria 14217
264 Ga0439452_002659 3300042010 Bacteria 6500
265 Ga0450903_003881 3300042138 Bacteria 2573
266 Ga0439459_0006722 3300042438 Bacteria 1925
267 Ga0450918_000071 3300042531 Bacteria 20844
268 Ga0451577_0000152 3300042876 Bacteria 153284
269 Ga0451577_0003919 3300042876 Bacteria 16077
270 Ga0451577_0005895 3300042876 Bacteria 12379
271 Ga0451577_0022122 3300042876 Bacteria 5807
272 Ga0466969_0000007 3300044656 Bacteria 152114
273 Ga0466969_0028050 3300044656 Bacteria 2879
274 Ga0466972_0026552 3300044658 Bacteria 2870
275 Ga0466965_0010850 3300044683 Bacteria 4262
276 Ga0466966_0001049 3300044684 Bacteria 17647
277 Ga0466961_0074951 3300044693 Bacteria 2145
278 Ga0466964_0015215 3300044706 Bacteria 2929
279 Ga0453684_0000122 3300044712 Bacteria 340529
280 Ga0453684_0051976 3300044712 Bacteria 5364
281 Ga0466971_0002740 3300044719 Bacteria 7447
282 Ga0451576_0000559 3300045051 Bacteria 79734
283 Ga0451576_0011412 3300045051 Bacteria 10095
284 Ga0495592_0000863 3300046454 Bacteria 20970
285 Ga0495650_0000976 3300046471 Bacteria 32712
286 Ga0495583_0000200 3300046506 Bacteria 100827
287 Ga0495606_0001544 3300046507 Bacteria 30344
288 Ga0495610_0012032 3300046512 Bacteria 5239
289 Ga0495621_0016056 3300046539 Bacteria 2396
290 Ga0495597_0000084 3300046542 Bacteria 83344
291 Ga0495625_0003764 3300046660 Bacteria 14726
292 Ga0495625_0011769 3300046660 Bacteria 7110
293 Ga0495657_0041937 3300046675 Bacteria 3128
294 Ga0495649_0000068 3300046694 Bacteria 92317
295 Ga0495589_0005194 3300046794 Bacteria 6888
296 Ga0495676_0059419 3300047321 Bacteria 3002
297 Ga0495686_0003813 3300047472 Bacteria 12784
298 Ga0495593_0015366 3300047673 Bacteria 4339
299 Ga0496100_0002419 3300048903 Bacteria 9458
300 Ga0496101_0005925 3300048904 Bacteria 7827
301 Ga0496102_0003811 3300048905 Bacteria 12753
302 Ga0496102_0008963 3300048905 Bacteria 8583
303 Ga0496102_0018292 3300048905 Bacteria 6156
304 Ga0496103_0005180 3300048906 Bacteria 7844
305 Ga0496104_0003649 3300048907 Bacteria 13294
306 Ga0496105_0003155 3300048908 Bacteria 12138
307 Ga0496106_0019277 3300048909 Bacteria 5058
308 Ga0496107_0071050 3300048910 Bacteria 2529
309 Ga0496108_0017215 3300048911 Bacteria 5912
310 Ga0496109_0058584 3300048912 Bacteria 3518
311 Ga0496110_0037658 3300048913 Bacteria 4204
312 Ga0496113_0014605 3300048916 Bacteria 5364
313 Ga0496114_0017025 3300048917 Bacteria 5862
314 Ga0496122_0000063 3300048925 Bacteria 241378
315 Ga0496123_0000045 3300048926 Bacteria 249294
316 Ga0496124_0000126 3300048927 Bacteria 159539
317 Ga0496124_0055195 3300048927 Bacteria 3359
318 Ga0496125_0047267 3300048928 Bacteria 3601
319 Ga0496125_0062247 3300048928 Bacteria 2986
320 Ga0501032_0043505 3300049569 Bacteria 3041
321 Ga0501043_0000243 3300049579 Bacteria 49191
322 Ga0501046_0000137 3300049580 Bacteria 78496
323 Ga0501047_0000050 3300049581 Bacteria 155628
324 Ga0501048_0000518 3300049582 Bacteria 27066
325 Ga0501198_000008 3300049649 Bacteria 129023
326 Ga0501222_000006 3300049662 Bacteria 129030
327 Ga0501265_002892 3300049762 Bacteria 1950
328 Ga0501045_0003144 3300049824 Bacteria 11290
329 nmdc:mga03683_4109_c1 3300050489 Bacteria 4786
330 nmdc:mga03n38_52034_c1 3300050490 Bacteria 1831
331 nmdc:mga0k408_54828_c1 3300050493 Bacteria 2311
332 nmdc:mga0k408_674_c1 3300050493 Bacteria 18724
333 nmdc:mga07m45_15192_c1 3300050496 Bacteria 4110
334 nmdc:mga07m45_7447_c1 3300050496 Bacteria 5595
335 nmdc:mga07m45_875_c1 3300050496 Bacteria 13121
336 Ga0500635_0000763 3300053080 Bacteria 8015
337 Ga0500644_0008115 3300053088 Bacteria 2762
338 Ga0500651_0044002 3300053093 Bacteria 2812
339 Ga0500593_000309 3300053117 Bacteria 19752
340 Ga0500608_008934 3300053122 Bacteria 4239
341 Ga0500559_0000214 3300053136 Bacteria 46366
342 Ga0500559_0051865 3300053136 Bacteria 1812
343 Ga0500568_0010244 3300053139 Bacteria 4402
344 Ga0500619_000067 3300053154 Bacteria 31547
345 Ga0500645_012746 3300053730 Bacteria 2714

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053136 Ga0500559_0051865 Ga0500559_0051865_21_1475 472
2 3300003323 rootH1_10018817 rootH1_100188173 478
3 3300053730 Ga0500645_012746 Ga0500645_012746_1187_2704 493
4 3300046471 Ga0495650_0000976 Ga0495650_0000976_15817_17541 546
5 3300005441 Ga0070700_100003835 Ga0070700_1000038352 547
6 3300005459 Ga0068867_100002562 Ga0068867_1000025629 547
7 3300028786 Ga0307517_10009915 Ga0307517_1000991510 547
8 3300031456 Ga0307513_10107424 Ga0307513_101074242 547
9 3300031616 Ga0307508_10000882 Ga0307508_100008822 547
10 3300021361 Ga0213872_10005350 Ga0213872_100053501 549
11 3300039447 Ga0436361_0850324 Ga0436361_0850324_14233_15939 549
12 3300053139 Ga0500568_0010244 Ga0500568_0010244_445_2169 554
13 3300032004 Ga0307414_10004474 Ga0307414_100044746 558
14 3300032005 Ga0307411_10000169 Ga0307411_100001696 558
15 3300049762 Ga0501265_002892 Ga0501265_002892_100_1821 558
16 iso_pu_bacteria 2738543013 2739248010 558
17 iso_pu_bacteria 2842733646 2842734161 558
18 iso_pu_bacteria 2842747753 2842749579 558
19 iso_pu_bacteria 2881101125 2881102915 558
20 iso_pu_bacteria 2885192300 2885193136 558
21 3300015683 Ga0183362_10005 Ga0183362_10005362 559
22 3300048927 Ga0496124_0000126 Ga0496124_0000126_152205_153929 561
23 3300048928 Ga0496125_0047267 Ga0496125_0047267_1811_3535 561
24 3300003784 Ga0055534_1003987 Ga0055534_10039872 562
25 3300003792 Ga0055540_1000393 Ga0055540_100039312 562
26 3300006177 Ga0075362_10018960 Ga0075362_100189602 562
27 3300006353 Ga0075370_10013158 Ga0075370_100131585 562
28 3300006353 Ga0075370_10041837 Ga0075370_100418372 562
29 3300013306 Ga0163162_10032818 Ga0163162_100328185 562
30 3300014497 Ga0182008_10000287 Ga0182008_1000028718 562
31 3300021361 Ga0213872_10009186 Ga0213872_100091862 562
32 3300025284 Ga0209130_1010334 Ga0209130_10103342 562
33 3300025291 Ga0209675_1001004 Ga0209675_10010047 562
34 3300025986 Ga0207658_10021329 Ga0207658_100213294 562
35 3300027682 Ga0209971_1007105 Ga0209971_10071052 562
36 3300028794 Ga0307515_10000040 Ga0307515_10000040232 562
37 3300031235 Ga0265330_10000062 Ga0265330_1000006286 562
38 3300031238 Ga0265332_10000001 Ga0265332_10000001424 562
39 3300031241 Ga0265325_10001489 Ga0265325_1000148911 562
40 3300031251 Ga0265327_10012542 Ga0265327_100125425 562
41 3300031456 Ga0307513_10104847 Ga0307513_101048472 562
42 3300031711 Ga0265314_10000145 Ga0265314_1000014516 562
43 3300041404 Ga0439436_0000259 Ga0439436_0000259_3780_5576 562
44 3300041406 Ga0439439_0009127 Ga0439439_0009127_193_1908 562
45 3300041411 Ga0439466_0001510 Ga0439466_0001510_3250_5046 562
46 3300041413 Ga0439465_0001093 Ga0439465_0001093_4940_6736 562
47 3300041997 Ga0439431_0001691 Ga0439431_0001691_2081_3877 562
48 3300042004 Ga0439445_0000922 Ga0439445_0000922_3172_4968 562
49 3300042006 Ga0439432_002127 Ga0439432_002127_1741_3537 562
50 3300042007 Ga0439449_0000530 Ga0439449_0000530_2864_4660 562
51 3300042010 Ga0439452_002659 Ga0439452_002659_524_2320 562
52 3300046542 Ga0495597_0000084 Ga0495597_0000084_69748_71463 562
53 3300046675 Ga0495657_0041937 Ga0495657_0041937_319_2028 562
54 3300048903 Ga0496100_0002419 Ga0496100_0002419_6333_8042 562
55 3300048904 Ga0496101_0005925 Ga0496101_0005925_4664_6373 562
56 3300048905 Ga0496102_0018292 Ga0496102_0018292_3197_4906 562
57 3300048906 Ga0496103_0005180 Ga0496103_0005180_429_2138 562
58 3300048907 Ga0496104_0003649 Ga0496104_0003649_1738_3447 562
59 3300048908 Ga0496105_0003155 Ga0496105_0003155_3016_4725 562
60 3300048909 Ga0496106_0019277 Ga0496106_0019277_1374_3083 562
61 3300048912 Ga0496109_0058584 Ga0496109_0058584_212_1921 562
62 3300048913 Ga0496110_0037658 Ga0496110_0037658_1004_2713 562
63 3300048925 Ga0496122_0000063 Ga0496122_0000063_152181_153905 562
64 3300048926 Ga0496123_0000045 Ga0496123_0000045_202606_204330 562
65 3300050489 nmdc:mga03683_4109_c1 nmdc:mga03683_4109_c1_2773_4488 562
66 3300050490 nmdc:mga03n38_52034_c1 nmdc:mga03n38_52034_c1_25_1788 562
67 3300050496 nmdc:mga07m45_7447_c1 nmdc:mga07m45_7447_c1_3681_5444 562
68 iso_pu_bacteria 2643221544 2643742851 563
69 3300005364 Ga0070673_100018961 Ga0070673_1000189612 564
70 3300005367 Ga0070667_100161055 Ga0070667_1001610552 564
71 3300005456 Ga0070678_100047738 Ga0070678_1000477382 564
72 3300025986 Ga0207658_10115413 Ga0207658_101154131 564
73 3300026089 Ga0207648_10027605 Ga0207648_100276056 564
74 3300026121 Ga0207683_10041776 Ga0207683_100417763 564
75 iso_pu_bacteria 2643221585 2643933311 564
76 iso_pu_bacteria 2643221656 2644314560 564
77 3300005719 Ga0068861_100037219 Ga0068861_1000372193 565
78 iso_pu_bacteria 2643221639 2644217515 565
79 iso_pu_bacteria 2643221646 2644258755 565
80 3300003322 rootL2_10001809 rootL2_100018093 566
81 3300003759 Ga0055525_1000031 Ga0055525_1000031238 566
82 3300005328 Ga0070676_10023506 Ga0070676_100235062 566
83 3300009148 Ga0105243_10032092 Ga0105243_100320923 566
84 3300021361 Ga0213872_10000058 Ga0213872_1000005874 566
85 3300021361 Ga0213872_10000102 Ga0213872_1000010250 566
86 3300021361 Ga0213872_10000150 Ga0213872_1000015014 566
87 3300025230 Ga0209563_100044 Ga0209563_100044307 566
88 3300031548 Ga0307408_100000008 Ga0307408_10000000844 566
89 3300039447 Ga0436361_0018388 Ga0436361_0018388_13187_14893 566
90 3300039447 Ga0436361_0068556 Ga0436361_0068556_43211_44938 566
91 3300039447 Ga0436361_0614815 Ga0436361_0614815_17603_19306 566
92 3300045051 Ga0451576_0011412 Ga0451576_0011412_7342_9054 566
93 3300048910 Ga0496107_0071050 Ga0496107_0071050_185_1912 566
94 3300050496 nmdc:mga07m45_875_c1 nmdc:mga07m45_875_c1_382_2097 566
95 iso_pu_bacteria 2738541337 2739055512 566
96 3300042138 Ga0450903_003881 Ga0450903_003881_802_2526 567
97 3300042876 Ga0451577_0022122 Ga0451577_0022122_2707_4431 567
98 3300031239 Ga0265328_10020225 Ga0265328_100202252 568
99 3300031250 Ga0265331_10003349 Ga0265331_100033493 568
100 3300031251 Ga0265327_10000328 Ga0265327_1000032854 568
101 3300031649 Ga0307514_10001111 Ga0307514_1000111113 568
102 3300031911 Ga0307412_10064815 Ga0307412_100648152 568
103 iso_pu_bacteria 2831864461 2831865518 568
104 iso_pu_bacteria 2886848708 2886851549 568
105 3300005337 Ga0070682_100025155 Ga0070682_1000251552 569
106 3300014968 Ga0157379_10071101 Ga0157379_100711012 569
107 3300028794 Ga0307515_10000026 Ga0307515_1000002681 569
108 3300028794 Ga0307515_10000132 Ga0307515_1000013275 569
109 3300028794 Ga0307515_10027450 Ga0307515_100274505 569
110 3300028794 Ga0307515_10052317 Ga0307515_100523174 569
111 3300031456 Ga0307513_10002364 Ga0307513_100023642 569
112 3300042876 Ga0451577_0000152 Ga0451577_0000152_61524_63335 569
113 3300044712 Ga0453684_0000122 Ga0453684_0000122_239108_240919 569
114 3300045051 Ga0451576_0000559 Ga0451576_0000559_61427_63187 569
115 iso_pu_bacteria 2585428062 2587756280 569
116 iso_pu_bacteria 2643221644 2644248246 569
117 3300003794 Ga0055531_10000168 Ga0055531_1000016853 570
118 3300009148 Ga0105243_10014462 Ga0105243_100144625 570
119 3300025298 Ga0209050_1009460 Ga0209050_10094602 570
120 3300025303 Ga0209051_1009542 Ga0209051_10095422 570
121 3300025303 Ga0209051_1009578 Ga0209051_10095783 570
122 3300025304 Ga0209257_1000021 Ga0209257_1000021282 570
123 3300025931 Ga0207644_10086782 Ga0207644_100867821 570
124 3300025935 Ga0207709_10004398 Ga0207709_100043987 570
125 3300026116 Ga0207674_10151625 Ga0207674_101516252 570
126 3300035114 Ga0373939_0000052 Ga0373939_0000052_24918_26645 570
127 3300035121 Ga0373960_0000046 Ga0373960_0000046_7546_9273 570
128 3300035691 Ga0373931_0000306 Ga0373931_0000306_2150_3877 570
129 3300048911 Ga0496108_0017215 Ga0496108_0017215_2741_4456 570
130 3300048916 Ga0496113_0014605 Ga0496113_0014605_2515_4230 570
131 3300005295 Ga0065707_10090569 Ga0065707_100905692 571
132 3300005843 Ga0068860_100000968 Ga0068860_10000096811 571
133 3300005844 Ga0068862_100005951 Ga0068862_1000059512 571
134 3300006881 Ga0068865_100005385 Ga0068865_1000053852 571
135 3300013297 Ga0157378_10003473 Ga0157378_1000347311 571
136 3300013306 Ga0163162_10006659 Ga0163162_1000665912 571
137 3300014326 Ga0157380_10028271 Ga0157380_100282713 571
138 3300017792 Ga0163161_10021312 Ga0163161_100213123 571
139 3300025938 Ga0207704_10002533 Ga0207704_100025337 571
140 3300026075 Ga0207708_10010493 Ga0207708_100104937 571
141 3300026089 Ga0207648_10000789 Ga0207648_1000078916 571
142 3300026118 Ga0207675_100004863 Ga0207675_10000486311 571
143 3300028380 Ga0268265_10044429 Ga0268265_100444292 571
144 3300037418 Ga0395900_0000058 Ga0395900_0000058_90293_92095 571
145 iso_pu_bacteria 2643221654 2644303996 571
146 3300003323 rootH1_10019886 rootH1_100198862 572
147 3300003775 Ga0055524_1000814 Ga0055524_10008143 572
148 3300003775 Ga0055524_1002342 Ga0055524_10023425 572
149 3300003794 Ga0055531_10002564 Ga0055531_100025647 572
150 3300003794 Ga0055531_10003021 Ga0055531_100030218 572
151 3300005262 Ga0065165_1000153 Ga0065165_100015375 572
152 3300006944 Ga0099823_1000031 Ga0099823_100003136 572
153 3300012497 Ga0157319_1000016 Ga0157319_100001641 572
154 3300013308 Ga0157375_10071564 Ga0157375_100715642 572
155 3300014968 Ga0157379_10025397 Ga0157379_100253972 572
156 3300025273 Ga0209673_1002426 Ga0209673_100242611 572
157 3300025298 Ga0209050_1007448 Ga0209050_10074484 572
158 3300025299 Ga0209256_1000579 Ga0209256_100057930 572
159 3300025299 Ga0209256_1001555 Ga0209256_10015557 572
160 3300025303 Ga0209051_1002778 Ga0209051_100277810 572
161 3300025304 Ga0209257_1000984 Ga0209257_100098422 572
162 3300025304 Ga0209257_1004760 Ga0209257_10047607 572
163 3300025986 Ga0207658_10013014 Ga0207658_100130143 572
164 3300027296 Ga0209389_1006709 Ga0209389_10067094 572
165 3300028381 Ga0268264_10094635 Ga0268264_100946352 572
166 3300028794 Ga0307515_10040148 Ga0307515_100401483 572
167 3300035089 Ga0373944_0021108 Ga0373944_0021108_59_1789 572
168 3300037068 Ga0373925_0014530 Ga0373925_0014530_876_2606 572
169 3300037068 Ga0373925_0096940 Ga0373925_0096940_133_1893 572
170 3300037471 Ga0395905_0004785 Ga0395905_0004785_1709_3439 572
171 3300042438 Ga0439459_0006722 Ga0439459_0006722_118_1866 572
172 3300042876 Ga0451577_0005895 Ga0451577_0005895_5461_7182 572
173 3300044656 Ga0466969_0000007 Ga0466969_0000007_128181_129923 572
174 3300047472 Ga0495686_0003813 Ga0495686_0003813_826_2559 572
175 3300048927 Ga0496124_0055195 Ga0496124_0055195_1309_3057 572
176 3300050493 nmdc:mga0k408_674_c1 nmdc:mga0k408_674_c1_12402_14141 572
177 3300003320 rootH2_10016426 rootH2_100164263 573
178 3300003322 rootL2_10001692 rootL2_1000169214 573
179 3300003771 Ga0055526_1005393 Ga0055526_10053934 573
180 3300003775 Ga0055524_1000253 Ga0055524_100025356 573
181 3300003791 Ga0055530_10000982 Ga0055530_1000098213 573
182 3300003792 Ga0055540_1000011 Ga0055540_100001184 573
183 3300005455 Ga0070663_100000193 Ga0070663_1000001932 573
184 3300005459 Ga0068867_100000018 Ga0068867_10000001882 573
185 3300006946 Ga0079104_1000465 Ga0079104_100046525 573
186 3300009148 Ga0105243_10000396 Ga0105243_1000039629 573
187 3300014745 Ga0157377_10000051 Ga0157377_1000005170 573
188 3300025273 Ga0209673_1007081 Ga0209673_10070813 573
189 3300025295 Ga0209564_1000008 Ga0209564_1000008816 573
190 3300025298 Ga0209050_1000532 Ga0209050_100053231 573
191 3300025299 Ga0209256_1000113 Ga0209256_100011399 573
192 3300025303 Ga0209051_1000020 Ga0209051_100002083 573
193 3300025304 Ga0209257_1000085 Ga0209257_100008583 573
194 3300025935 Ga0207709_10002211 Ga0207709_100022118 573
195 3300026067 Ga0207678_10000651 Ga0207678_100006512 573
196 3300026089 Ga0207648_10000060 Ga0207648_1000006019 573
197 3300027111 Ga0209281_1000195 Ga0209281_100019524 573
198 3300027876 Ga0209974_10003663 Ga0209974_100036632 573
199 3300028794 Ga0307515_10000090 Ga0307515_10000090146 573
200 3300028794 Ga0307515_10010976 Ga0307515_1001097610 573
201 3300028794 Ga0307515_10015462 Ga0307515_1001546212 573
202 3300028794 Ga0307515_10065375 Ga0307515_100653753 573
203 3300030522 Ga0307512_10037028 Ga0307512_100370282 573
204 3300031456 Ga0307513_10012382 Ga0307513_100123827 573
205 3300031456 Ga0307513_10078658 Ga0307513_100786582 573
206 3300031507 Ga0307509_10090530 Ga0307509_100905302 573
207 3300031616 Ga0307508_10001589 Ga0307508_100015893 573
208 3300031649 Ga0307514_10004507 Ga0307514_1000450711 573
209 3300031730 Ga0307516_10000054 Ga0307516_1000005410 573
210 3300031730 Ga0307516_10000398 Ga0307516_1000039823 573
211 3300031730 Ga0307516_10006176 Ga0307516_1000617613 573
212 3300031901 Ga0307406_10058854 Ga0307406_100588542 573
213 3300032004 Ga0307414_10025241 Ga0307414_100252412 573
214 3300033179 Ga0307507_10053810 Ga0307507_100538101 573
215 3300037471 Ga0395905_0010762 Ga0395905_0010762_389_2125 573
216 3300042531 Ga0450918_000071 Ga0450918_000071_6822_8555 573
217 3300042876 Ga0451577_0003919 Ga0451577_0003919_7717_9450 573
218 3300046512 Ga0495610_0012032 Ga0495610_0012032_2840_4561 573
219 3300046660 Ga0495625_0011769 Ga0495625_0011769_1063_2784 573
220 3300048905 Ga0496102_0008963 Ga0496102_0008963_3313_5034 573
221 3300048917 Ga0496114_0017025 Ga0496114_0017025_3282_5018 573
222 3300049569 Ga0501032_0043505 Ga0501032_0043505_1107_2831 573
223 3300049579 Ga0501043_0000243 Ga0501043_0000243_14881_16605 573
224 3300049580 Ga0501046_0000137 Ga0501046_0000137_20177_21901 573
225 3300049581 Ga0501047_0000050 Ga0501047_0000050_121560_123284 573
226 3300049582 Ga0501048_0000518 Ga0501048_0000518_10495_12219 573
227 3300049649 Ga0501198_000008 Ga0501198_000008_103760_105481 573
228 3300049662 Ga0501222_000006 Ga0501222_000006_23563_25284 573
229 3300049824 Ga0501045_0003144 Ga0501045_0003144_669_2393 573
230 3300050493 nmdc:mga0k408_54828_c1 nmdc:mga0k408_54828_c1_454_2175 573
231 3300005262 Ga0065165_1000569 Ga0065165_100056939 574
232 3300005331 Ga0070670_100015056 Ga0070670_1000150563 574
233 3300005338 Ga0068868_100042658 Ga0068868_1000426582 574
234 3300005338 Ga0068868_100084176 Ga0068868_1000841762 574
235 3300005347 Ga0070668_100066351 Ga0070668_1000663512 574
236 3300005353 Ga0070669_100005917 Ga0070669_1000059174 574
237 3300005354 Ga0070675_100009963 Ga0070675_1000099632 574
238 3300005355 Ga0070671_100021554 Ga0070671_1000215542 574
239 3300005356 Ga0070674_100000568 Ga0070674_1000005689 574
240 3300005356 Ga0070674_100103158 Ga0070674_1001031582 574
241 3300005456 Ga0070678_100009269 Ga0070678_1000092693 574
242 3300005459 Ga0068867_100007834 Ga0068867_1000078346 574
243 3300005543 Ga0070672_100022977 Ga0070672_1000229772 574
244 3300005564 Ga0070664_100068079 Ga0070664_1000680792 574
245 3300005834 Ga0068851_10023637 Ga0068851_100236372 574
246 3300006353 Ga0075370_10014579 Ga0075370_100145794 574
247 3300014968 Ga0157379_10044446 Ga0157379_100444462 574
248 3300014969 Ga0157376_10039970 Ga0157376_100399702 574
249 3300021361 Ga0213872_10000049 Ga0213872_1000004937 574
250 3300021361 Ga0213872_10008431 Ga0213872_100084313 574
251 3300025907 Ga0207645_10055845 Ga0207645_100558452 574
252 3300025920 Ga0207649_10001388 Ga0207649_100013889 574
253 3300025923 Ga0207681_10005519 Ga0207681_100055194 574
254 3300025925 Ga0207650_10000265 Ga0207650_1000026510 574
255 3300025926 Ga0207659_10001160 Ga0207659_100011602 574
256 3300025926 Ga0207659_10056530 Ga0207659_100565301 574
257 3300025927 Ga0207687_10094188 Ga0207687_100941882 574
258 3300025931 Ga0207644_10027312 Ga0207644_100273123 574
259 3300025933 Ga0207706_10001386 Ga0207706_1000138610 574
260 3300025937 Ga0207669_10005356 Ga0207669_100053567 574
261 3300025940 Ga0207691_10000390 Ga0207691_1000039069 574
262 3300025940 Ga0207691_10015487 Ga0207691_100154877 574
263 3300025945 Ga0207679_10000825 Ga0207679_100008252 574
264 3300025945 Ga0207679_10061284 Ga0207679_100612842 574
265 3300025960 Ga0207651_10003561 Ga0207651_100035618 574
266 3300026023 Ga0207677_10049655 Ga0207677_100496552 574
267 3300026023 Ga0207677_10102533 Ga0207677_101025332 574
268 3300026089 Ga0207648_10005196 Ga0207648_100051966 574
269 3300026089 Ga0207648_10027223 Ga0207648_100272234 574
270 3300028379 Ga0268266_10067671 Ga0268266_100676712 574
271 3300028794 Ga0307515_10110270 Ga0307515_101102703 574
272 3300031507 Ga0307509_10000234 Ga0307509_1000023417 574
273 3300031507 Ga0307509_10001098 Ga0307509_1000109815 574
274 3300031548 Ga0307408_100078106 Ga0307408_1000781061 574
275 3300031730 Ga0307516_10010171 Ga0307516_100101711 574
276 3300031731 Ga0307405_10000483 Ga0307405_1000048311 574
277 3300031852 Ga0307410_10004639 Ga0307410_100046398 574
278 3300032004 Ga0307414_10011344 Ga0307414_100113447 574
279 3300033180 Ga0307510_10015140 Ga0307510_100151402 574
280 3300033180 Ga0307510_10154560 Ga0307510_101545601 574
281 3300035691 Ga0373931_0005964 Ga0373931_0005964_3133_4869 574
282 3300035691 Ga0373931_0016512 Ga0373931_0016512_312_2075 574
283 3300039447 Ga0436361_0082864 Ga0436361_0082864_64698_66452 574
284 3300039447 Ga0436361_0747597 Ga0436361_0747597_3849_5603 574
285 3300044658 Ga0466972_0026552 Ga0466972_0026552_843_2573 574
286 3300044706 Ga0466964_0015215 Ga0466964_0015215_559_2289 574
287 3300044712 Ga0453684_0051976 Ga0453684_0051976_214_1947 574
288 3300046454 Ga0495592_0000863 Ga0495592_0000863_16141_17874 574
289 3300046539 Ga0495621_0016056 Ga0495621_0016056_585_2357 574
290 3300047321 Ga0495676_0059419 Ga0495676_0059419_17_1753 574
291 3300047673 Ga0495593_0015366 Ga0495593_0015366_914_2650 574
292 3300048905 Ga0496102_0003811 Ga0496102_0003811_1608_3344 574
293 3300053088 Ga0500644_0008115 Ga0500644_0008115_168_1901 574
294 3300053093 Ga0500651_0044002 Ga0500651_0044002_11_1744 574
295 3300053117 Ga0500593_000309 Ga0500593_000309_17782_19518 574
296 3300053136 Ga0500559_0000214 Ga0500559_0000214_16731_18464 574
297 3300053154 Ga0500619_000067 Ga0500619_000067_14040_15776 574
298 iso_pu_bacteria 2588253510 2588291063 575
299 3300009093 Ga0105240_10003836 Ga0105240_100038366 576
300 3300009545 Ga0105237_10001634 Ga0105237_1000163418 576
301 3300010375 Ga0105239_10002435 Ga0105239_1000243514 576
302 3300025913 Ga0207695_10020987 Ga0207695_100209876 576
303 3300026041 Ga0207639_10142575 Ga0207639_101425751 576
304 3300048928 Ga0496125_0062247 Ga0496125_0062247_1007_2752 576
305 3300013297 Ga0157378_10191148 Ga0157378_101911481 578
306 3300046660 Ga0495625_0003764 Ga0495625_0003764_4072_5811 579
307 3300025231 Ga0207427_100282 Ga0207427_10028227 582
308 3300025303 Ga0209051_1001397 Ga0209051_10013977 582
309 3300044656 Ga0466969_0028050 Ga0466969_0028050_925_2688 585
310 3300044683 Ga0466965_0010850 Ga0466965_0010850_1027_2790 585
311 3300044684 Ga0466966_0001049 Ga0466966_0001049_15736_17499 585
312 3300044693 Ga0466961_0074951 Ga0466961_0074951_65_1828 585
313 3300044719 Ga0466971_0002740 Ga0466971_0002740_5274_7037 585
314 3300025253 Ga0209677_102141 Ga0209677_1021413 587
315 3300002705 JGI25156J39149_1000612 JGI25156J39149_100061215 589
316 3300002738 JGI25154J39366_1003656 JGI25154J39366_10036562 589
317 3300002741 JGI25157J39369_1000312 JGI25157J39369_100031215 589
318 3300003752 Ga0055539_1000392 Ga0055539_100039214 589
319 3300003752 Ga0055539_1001127 Ga0055539_10011273 589
320 3300003756 Ga0055533_1000024 Ga0055533_1000024111 589
321 3300003761 Ga0055535_1000156 Ga0055535_10001563 589
322 3300003763 Ga0055529_1000382 Ga0055529_100038220 589
323 3300005327 Ga0070658_10024448 Ga0070658_100244482 589
324 3300005339 Ga0070660_100008878 Ga0070660_1000088784 589
325 3300005366 Ga0070659_100031949 Ga0070659_1000319492 589
326 3300005563 Ga0068855_100002198 Ga0068855_10000219810 589
327 3300005577 Ga0068857_100004386 Ga0068857_1000043864 589
328 3300005578 Ga0068854_100010289 Ga0068854_1000102892 589
329 3300005614 Ga0068856_100001613 Ga0068856_1000016139 589
330 3300006353 Ga0075370_10014890 Ga0075370_100148902 589
331 3300009093 Ga0105240_10048604 Ga0105240_100486043 589
332 3300010375 Ga0105239_10057285 Ga0105239_100572853 589
333 3300013105 Ga0157369_10213147 Ga0157369_102131471 589
334 3300025226 Ga0209674_100007 Ga0209674_100007156 589
335 3300025230 Ga0209563_100060 Ga0209563_100060113 589
336 3300025242 Ga0209258_100608 Ga0209258_10060824 589
337 3300025242 Ga0209258_101271 Ga0209258_1012715 589
338 3300025246 Ga0209646_1000056 Ga0209646_100005669 589
339 3300025250 Ga0209026_1000009 Ga0209026_1000009269 589
340 3300025253 Ga0209677_100088 Ga0209677_10008897 589
341 3300025253 Ga0209677_100112 Ga0209677_10011266 589
342 3300025256 Ga0209759_1000035 Ga0209759_1000035194 589
343 3300025256 Ga0209759_1005260 Ga0209759_10052602 589
344 3300025256 Ga0209759_1007594 Ga0209759_10075942 589
345 3300025272 Ga0209455_1000108 Ga0209455_1000108154 589
346 3300025913 Ga0207695_10023098 Ga0207695_100230983 589
347 3300025932 Ga0207690_10033018 Ga0207690_100330182 589
348 3300025949 Ga0207667_10004482 Ga0207667_1000448214 589
349 3300025960 Ga0207651_10012513 Ga0207651_100125132 589
350 3300026078 Ga0207702_10001270 Ga0207702_100012709 589
351 3300026116 Ga0207674_10004701 Ga0207674_1000470113 589
352 3300028666 Ga0265336_10000039 Ga0265336_1000003950 589
353 3300029957 Ga0265324_10000223 Ga0265324_1000022311 589
354 3300031730 Ga0307516_10001841 Ga0307516_1000184118 589
355 3300038443 Ga0395901_0030251 Ga0395901_0030251_157_1926 589
356 3300046506 Ga0495583_0000200 Ga0495583_0000200_56139_57908 589
357 3300046507 Ga0495606_0001544 Ga0495606_0001544_13166_14935 589
358 3300046694 Ga0495649_0000068 Ga0495649_0000068_60606_62375 589
359 3300046794 Ga0495589_0005194 Ga0495589_0005194_1983_3752 589
360 3300050496 nmdc:mga07m45_15192_c1 nmdc:mga07m45_15192_c1_2052_3821 589
361 3300053080 Ga0500635_0000763 Ga0500635_0000763_139_1908 589
362 3300053122 Ga0500608_008934 Ga0500608_008934_1377_3146 589

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17768

RecJ_OB

RecJ OB domain

498

595

0.97

PF01368

DHH

DHH family

73

223

0.88

PF02272

DHHA1

DHHA1 domain

353

483

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zxp-assembly1.cif.gz_A crystal structure of recj in complex with mn2+ from thermus thermophilus hb8 0.8893 6 589
2zxr-assembly1.cif.gz_A crystal structure of recj in complex with mg2+ from thermus thermophilus hb8 0.8788 6 588
6lrd-assembly1.cif.gz_A structure of recj complexed with a 5'-p-dspacer-modified ssdna 0.855 4 589
5f56-assembly1.cif.gz_A structure of recj complexed with dna and ssb-ct 0.8524 1 589
5f54-assembly1.cif.gz_A structure of recj complexed with dtmp 0.8501 3 588
ID Description Score Start End Superfamily
af_P21893_327_456_3.10.310.30 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1; 0.968 352 478 3.10.310.30
af_P21893_50_326_3.90.1640.30 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core); 0.9601 53 348 3.90.1640.30
af_P21893_50_326_3.90.1640.30 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core); 0.9533 53 348 3.90.1640.30
5f56A03 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1; 0.9414 351 480 3.10.310.30
af_Q2FXT9_57_316_3.90.1640.30 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core); 0.941 52 348 3.90.1640.30
ID Description Score Start End GO Terms
AF-A0A7M3J3S8-F1-model_v4 deleted 0.9783 376 459
AF-A0A520G4T0-F1-model_v4 Single-stranded-DNA-specific exonuclease RecJ 0.9739 9 271 GO:0004527
AF-A0A254N6R7-F1-model_v4 Single-stranded-DNA-specific exonuclease RecJ 0.9731 1 589 GO:0003676
GO:0006281
GO:0006310
GO:0008409
AF-A0A447TE34-F1-model_v4 SsDNA exonuclease RecJ 0.9706 519 589 GO:0004527
AF-A0A2N1WV09-F1-model_v4 deleted 0.964 8 365

Feature Viewer

pLDDT pTM Quality
89.27 0.87 High
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Predicted Structure (AlphaFold2)

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