F420654

General Info

Members Datasets Scaffolds Average Seq Length
356 231 345 325

Family's Representative Sequence

Representative Sequence 3300050491|nmdc:mga00v17_76110_c1|nmdc:mga00v17_76110_c1_275_1444
Length 389
Sequence VDCTTAVAATRHGDAGPIRTPRRVGHADTARGQTSPHGDVWRCSTPDADRAALRTRRVPATADPMSTILVCGGAGYIGSHMAKWLAAHGSRAVVLDNFSTGHRAAVRFGPVLEADLLDPASLDAAFAQGPFDAVMHFCARSLVGESVQQPYDYYENNVVGTLHLLRAMQRHGVGRIVFSSTAAVFGEPVHARIDETHPTAPINPYGASKLMVERILADAATAYGLRSVTLRYFNAAGASAAGDIGEAHAPETHLIPNVLRAALGGGARLQVFGDDWATPDGSCVRDYIHVDDLAQAHWHALAYMDAHTGAHTFNLGNGQGFSVRDVIAAAEAVSGRRIAYDVAPRRPGDPAVLVAASARARRELGWAPRYTSLTEIVETAWRWHCHPAY

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
4 2643221559 Lysobacter sp. Root559 Isolate Unclassified
5 2643221577 Rhodanobacter sp. Root627 Isolate Unclassified
6 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
7 2643221586 Lysobacter sp. Root667 Isolate Unclassified
8 2643221612 Lysobacter sp. Root76 Isolate Unclassified
9 2643221685 Rhodanobacter sp. Root480 Isolate Unclassified
10 2643221727 Lysobacter sp. Root96 Isolate Unclassified
11 2681812866 Enterobacter asburiae NFIX55 Isolate Rhizoplane
12 2751185917 Enterobacter sp. HK169 Isolate Unclassified
13 2927833300 Enterobacter sp. SLBN-59 Isolate Rhizosphere
14 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
15 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
16 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
17 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
18 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
19 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
20 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
21 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
22 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
23 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
24 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
25 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
26 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
27 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
28 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
29 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
30 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
31 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
32 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
33 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
34 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
35 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
36 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
37 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
38 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
39 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
40 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
41 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
42 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
43 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
44 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
45 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
46 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
47 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
48 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
49 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
50 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
51 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
52 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
53 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
54 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
55 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
56 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
57 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
58 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
59 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
60 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
61 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
62 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
63 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
64 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
65 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
66 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
67 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
68 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
69 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
70 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
71 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
72 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
73 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
74 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
75 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
76 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
77 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
78 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
79 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
80 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
81 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
82 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
83 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
84 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
85 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
86 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
87 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
88 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
89 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
90 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
91 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
92 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
93 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
94 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
95 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
96 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
97 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
98 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
99 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
100 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
101 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
102 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
103 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
104 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
105 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
108 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
109 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
112 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
113 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
114 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
115 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
116 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
117 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
119 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
120 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
121 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
123 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
125 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
156 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
157 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
158 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
159 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
160 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
161 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
162 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
163 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
164 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
165 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
166 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
167 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
168 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
169 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
170 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
171 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
172 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
173 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
174 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
175 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
176 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
177 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
178 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
179 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
180 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
181 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
182 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
183 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
184 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
185 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
186 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
187 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
188 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
189 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
190 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
191 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
192 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
193 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
194 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
195 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
196 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
197 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
198 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
199 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
200 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
201 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
202 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
203 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
204 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
205 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
206 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
207 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
208 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
209 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
210 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
211 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
212 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
213 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
214 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
215 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
216 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
217 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
218 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
219 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
220 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
221 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
222 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
223 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
224 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
225 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
226 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
227 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
228 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
229 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
230 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
231 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.35
Metatranscriptomes 0
Isolates 3.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.01
Nodule 0
Rhizoplane 2.81
Rhizosphere 69.94
Stem 0
Stem Tuber 0
Unclassified 11.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_353042 2162886007 Bacteria 17183
2 MBSR1b_contig_3671437 2162886012 Bacteria 2098
3 JGI24034J26672_10000005 3300002239 Bacteria 404185
4 JGI25162J39368_1000403 3300002737 Bacteria 35711
5 JGI25164J39214_1000360 3300002772 Bacteria 27828
6 JGI25151J46595_10010995 3300003187 Bacteria 4181
7 JGI25165J46597_1000419 3300003214 Bacteria 43972
8 rootH1_10068307 3300003316 Bacteria 2393
9 rootH1_10068307 3300003323 Bacteria 8984
10 rootH2_10019989 3300003320 Bacteria 27211
11 rootH1_10000022 3300003316 Bacteria 2348
12 rootH1_10000022 3300003323 Bacteria 4146
13 Ga0055535_1000253 3300003761 Bacteria 56580
14 Ga0055542_1000104 3300003762 Bacteria 113323
15 Ga0055526_1000022 3300003771 Bacteria 172746
16 Ga0055537_1000009 3300003773 Bacteria 140933
17 Ga0055524_1000036 3300003775 Bacteria 171459
18 Ga0055524_1005871 3300003775 Bacteria 5416
19 Ga0055524_1021645 3300003775 Bacteria 2124
20 Ga0055536_1005372 3300003781 Bacteria 6280
21 Ga0055536_1009297 3300003781 Bacteria 4083
22 Ga0055534_1000010 3300003784 Bacteria 171486
23 Ga0055528_1000014 3300003790 Bacteria 172746
24 Ga0055530_10003834 3300003791 Bacteria 8251
25 Ga0055531_10021761 3300003794 Bacteria 2473
26 Ga0055531_10035893 3300003794 Bacteria 1541
27 Ga0065704_10070491 3300005289 Bacteria 22598
28 Ga0065704_10070657 3300005289 Bacteria 18234
29 Ga0065704_10082799 3300005289 Bacteria 3546
30 Ga0065704_10089910 3300005289 Bacteria 2821
31 Ga0065715_10118565 3300005293 Bacteria 2312
32 Ga0065707_10088909 3300005295 Bacteria 4519
33 Ga0065707_10108321 3300005295 Bacteria 2515
34 Ga0070676_10027508 3300005328 Bacteria 3226
35 Ga0070683_100135058 3300005329 Bacteria 2335
36 Ga0070690_100056123 3300005330 Bacteria 2524
37 Ga0070660_100065092 3300005339 Bacteria 2837
38 Ga0070687_100005631 3300005343 Bacteria 5078
39 Ga0070661_100109343 3300005344 Bacteria 2063
40 Ga0070692_10006831 3300005345 Bacteria 4984
41 Ga0070668_100167411 3300005347 Bacteria 1787
42 Ga0070669_100002090 3300005353 Bacteria 14440
43 Ga0070669_100004717 3300005353 Bacteria 9829
44 Ga0070669_100037623 3300005353 Bacteria 3510
45 Ga0070659_100000003 3300005366 Bacteria 309142
46 Ga0070714_100000026 3300005435 Bacteria 145396
47 Ga0070714_100002819 3300005435 Bacteria 12820
48 Ga0070714_100014528 3300005435 Bacteria 6328
49 Ga0070710_10000001 3300005437 Bacteria 552187
50 Ga0070710_10066550 3300005437 Bacteria 2066
51 Ga0070711_100023920 3300005439 Bacteria 3980
52 Ga0070705_100002831 3300005440 Bacteria 8642
53 Ga0070700_100007026 3300005441 Bacteria 6047
54 Ga0070708_100002441 3300005445 Bacteria 14409
55 Ga0070662_100202539 3300005457 Bacteria 1576
56 Ga0070681_10058251 3300005458 Bacteria 3843
57 Ga0070681_10130916 3300005458 Bacteria 2441
58 Ga0070706_100000034 3300005467 Bacteria 152279
59 Ga0070706_100012784 3300005467 Bacteria 7770
60 Ga0070706_100026750 3300005467 Bacteria 5305
61 Ga0070707_100002600 3300005468 Bacteria 17153
62 Ga0070707_100120593 3300005468 Bacteria 2546
63 Ga0070698_100063551 3300005471 Bacteria 3722
64 Ga0070679_100203538 3300005530 Bacteria 1944
65 Ga0070679_100304623 3300005530 Bacteria 1544
66 Ga0070697_100001371 3300005536 Bacteria 18449
67 Ga0070672_100025988 3300005543 Bacteria 4350
68 Ga0070686_100072956 3300005544 Bacteria 2252
69 Ga0070696_100012408 3300005546 Bacteria 5717
70 Ga0068855_100149875 3300005563 Bacteria 2652
71 Ga0068857_100000207 3300005577 Bacteria 38345
72 Ga0068854_100044002 3300005578 Bacteria 3167
73 Ga0068864_100503552 3300005618 Bacteria 1165
74 Ga0068861_100006832 3300005719 Bacteria 7790
75 Ga0068861_100088659 3300005719 Bacteria 2437
76 Ga0068861_100365762 3300005719 Bacteria 1270
77 Ga0068858_100003055 3300005842 Bacteria 16771
78 Ga0068858_100043072 3300005842 Bacteria 4186
79 Ga0068862_100407630 3300005844 Bacteria 1273
80 Ga0081455_10019031 3300005937 Bacteria 6512
81 Ga0081540_1002021 3300005983 Bacteria 16935
82 Ga0070717_10000005 3300006028 Bacteria 357819
83 Ga0070717_10000054 3300006028 Bacteria 99604
84 Ga0070717_10084844 3300006028 Bacteria 2664
85 Ga0075364_10002576 3300006051 Bacteria 10165
86 Ga0075364_10086709 3300006051 Bacteria 2074
87 Ga0075364_10176691 3300006051 Bacteria 1444
88 Ga0070712_100000629 3300006175 Bacteria 20775
89 Ga0075366_10111896 3300006195 Bacteria 1643
90 Ga0075428_100076163 3300006844 Bacteria 3663
91 Ga0075428_100189659 3300006844 Bacteria 2224
92 Ga0075433_10386500 3300006852 Bacteria 1235
93 Ga0075429_100009632 3300006880 Bacteria 8382
94 Ga0068865_100141315 3300006881 Bacteria 1816
95 Ga0068865_100367207 3300006881 Unclassified 1170
96 Ga0105240_10023608 3300009093 Bacteria 8125
97 Ga0105240_10425572 3300009093 Bacteria 1491
98 Ga0111539_10016636 3300009094 Bacteria 9114
99 Ga0111539_10037338 3300009094 Bacteria 5867
100 Ga0111539_10170666 3300009094 Bacteria 2541
101 Ga0105247_10000033 3300009101 Bacteria 184433
102 Ga0114129_10787379 3300009147 Bacteria 1214
103 Ga0105243_10369605 3300009148 Bacteria 1323
104 Ga0105241_10016320 3300009174 Bacteria 5444
105 Ga0105242_10215752 3300009176 Bacteria 1712
106 Ga0105248_10246912 3300009177 Bacteria 2009
107 Ga0105248_10625890 3300009177 Bacteria 1214
108 Ga0105238_10040571 3300009551 Bacteria 4716
109 Ga0105238_10118227 3300009551 Bacteria 2631
110 Ga0105249_10002944 3300009553 Bacteria 14690
111 Ga0105249_10542527 3300009553 Bacteria 1213
112 Ga0105246_10020409 3300011119 Bacteria 4249
113 Ga0105246_10496810 3300011119 Bacteria 1035
114 Ga0157371_10146139 3300013102 Bacteria 1685
115 Ga0157378_10204065 3300013297 Bacteria 1871
116 Ga0163162_10055913 3300013306 Bacteria 3975
117 Ga0157372_10738356 3300013307 Bacteria 1145
118 Ga0157375_10062897 3300013308 Bacteria 3689
119 Ga0157375_10123788 3300013308 Bacteria 2698
120 Ga0157375_10317720 3300013308 Bacteria 1722
121 Ga0157380_10001244 3300014326 Bacteria 16531
122 Ga0182008_10010037 3300014497 Bacteria 5084
123 Ga0157379_10158121 3300014968 Unclassified 2045
124 Ga0157376_10054920 3300014969 Bacteria 3322
125 Ga0183369_1013 3300015685 Bacteria 222738
126 Ga0183360_10001 3300015689 Bacteria 3943671
127 Ga0163161_10027185 3300017792 Bacteria 4058
128 Ga0213874_10013417 3300021377 Bacteria 2122
129 Ga0213876_10009958 3300021384 Bacteria 5109
130 Ga0213876_10013253 3300021384 Bacteria 4381
131 Ga0213876_10028941 3300021384 Bacteria 2922
132 Ga0213876_10040552 3300021384 Bacteria 2460
133 Ga0213876_10121333 3300021384 Bacteria 1388
134 Ga0213875_10059480 3300021388 Bacteria 1789
135 Ga0207672_1000120 3300025223 Bacteria 10573
136 Ga0209672_100338 3300025228 Bacteria 30157
137 Ga0207427_100078 3300025231 Bacteria 147526
138 Ga0209437_100090 3300025233 Bacteria 247138
139 Ga0209258_100045 3300025242 Bacteria 369941
140 Ga0209148_1000052 3300025254 Bacteria 399449
141 Ga0209233_1000077 3300025261 Bacteria 349570
142 Ga0209565_1000001 3300025263 Bacteria 2950419
143 Ga0209565_1004872 3300025263 Bacteria 4007
144 Ga0209455_1002022 3300025272 Bacteria 8276
145 Ga0209673_1000001 3300025273 Bacteria 3176258
146 Ga0209130_1003814 3300025284 Bacteria 6107
147 Ga0209675_1000001 3300025291 Bacteria 2950293
148 Ga0209675_1017797 3300025291 Bacteria 2015
149 Ga0209676_1001495 3300025292 Bacteria 21489
150 Ga0209676_1003105 3300025292 Bacteria 10679
151 Ga0209676_1005188 3300025292 Bacteria 6913
152 Ga0209676_1007417 3300025292 Bacteria 5151
153 Ga0209025_1001439 3300025294 Bacteria 31300
154 Ga0209564_1000001 3300025295 Bacteria 3176258
155 Ga0209564_1008059 3300025295 Bacteria 5278
156 Ga0209758_1020374 3300025297 Bacteria 3141
157 Ga0209050_1000712 3300025298 Bacteria 48980
158 Ga0209256_1000006 3300025299 Bacteria 1250310
159 Ga0209256_1002032 3300025299 Bacteria 17993
160 Ga0209256_1003634 3300025299 Bacteria 10569
161 Ga0209051_1007240 3300025303 Bacteria 6099
162 Ga0209257_1001551 3300025304 Bacteria 26654
163 Ga0209257_1001785 3300025304 Bacteria 23687
164 Ga0207692_10000007 3300025898 Bacteria 233250
165 Ga0207710_10000001 3300025900 Bacteria 1797433
166 Ga0207680_10194443 3300025903 Unclassified 1379
167 Ga0207647_10017289 3300025904 Bacteria 4903
168 Ga0207705_10014586 3300025909 Bacteria 5655
169 Ga0207705_10155167 3300025909 Bacteria 1717
170 Ga0207684_10000240 3300025910 Bacteria 82172
171 Ga0207684_10010934 3300025910 Bacteria 7957
172 Ga0207707_10123019 3300025912 Bacteria 2269
173 Ga0207695_10057786 3300025913 Bacteria 4029
174 Ga0207693_10000648 3300025915 Bacteria 31139
175 Ga0207663_10017676 3300025916 Bacteria 3980
176 Ga0207662_10000542 3300025918 Bacteria 16756
177 Ga0207657_10024421 3300025919 Bacteria 5596
178 Ga0207657_10150049 3300025919 Bacteria 1899
179 Ga0207652_10060508 3300025921 Unclassified 3267
180 Ga0207646_10001951 3300025922 Bacteria 24751
181 Ga0207681_10001285 3300025923 Bacteria 16206
182 Ga0207681_10059597 3300025923 Bacteria 2617
183 Ga0207694_10127772 3300025924 Bacteria 2035
184 Ga0207700_10115606 3300025928 Bacteria 2167
185 Ga0207664_10000012 3300025929 Bacteria 278872
186 Ga0207664_10002615 3300025929 Bacteria 11914
187 Ga0207664_10076026 3300025929 Bacteria 2717
188 Ga0207644_10141925 3300025931 Bacteria 1850
189 Ga0207690_10000021 3300025932 Bacteria 217710
190 Ga0207690_10000207 3300025932 Bacteria 45657
191 Ga0207706_10233705 3300025933 Bacteria 1608
192 Ga0207691_10014727 3300025940 Bacteria 7454
193 Ga0207691_10071441 3300025940 Bacteria 3132
194 Ga0207668_10096977 3300025972 Bacteria 2181
195 Ga0207703_10000700 3300026035 Bacteria 33180
196 Ga0207639_10286068 3300026041 Bacteria 1452
197 Ga0207708_10000741 3300026075 Bacteria 24495
198 Ga0207708_10004324 3300026075 Bacteria 10461
199 Ga0207708_10053440 3300026075 Bacteria 3078
200 Ga0207708_10144445 3300026075 Bacteria 1869
201 Ga0207648_10101179 3300026089 Bacteria 2525
202 Ga0207674_10002163 3300026116 Bacteria 24860
203 Ga0207675_100010498 3300026118 Bacteria 8677
204 Ga0207675_100055461 3300026118 Bacteria 3697
205 Ga0207675_100302358 3300026118 Bacteria 1558
206 Ga0207683_10201639 3300026121 Bacteria 1809
207 Ga0209371_1017251 3300027312 Bacteria 1875
208 Ga0268265_10049492 3300028380 Bacteria 3161
209 Ga0265326_10000209 3300028558 Bacteria 29182
210 Ga0265319_1003036 3300028563 Bacteria 8897
211 Ga0265334_10000266 3300028573 Bacteria 29547
212 Ga0265336_10006306 3300028666 Bacteria 4288
213 Ga0265338_10006336 3300028800 Bacteria 15118
214 Ga0265338_10022084 3300028800 Bacteria 6608
215 Ga0268256_1019228 3300030500 Bacteria 1875
216 Ga0265316_10024096 3300031344 Bacteria 5109
217 Ga0307408_100331275 3300031548 Bacteria 1286
218 Ga0265314_10046068 3300031711 Bacteria 3079
219 Ga0265314_10107228 3300031711 Bacteria 1783
220 Ga0316576_10009267 3300031727 Bacteria 6346
221 Ga0316576_10024694 3300031727 Bacteria 4198
222 Ga0307405_10397592 3300031731 Bacteria 1078
223 Ga0307406_10000994 3300031901 Bacteria 15740
224 Ga0307409_100099328 3300031995 Bacteria 2410
225 Ga0307416_100183760 3300032002 Bacteria 1963
226 Ga0307414_10310381 3300032004 Bacteria 1338
227 Ga0316574_0044798 3300035398 Bacteria 2738
228 Ga0316574_0155370 3300035398 Bacteria 1474
229 Ga0316582_0008450 3300036647 Bacteria 5536
230 Ga0395899_0003933 3300037312 Bacteria 11711
231 Ga0395899_0004832 3300037312 Bacteria 10492
232 Ga0395899_0007547 3300037312 Bacteria 8397
233 Ga0395900_0000514 3300037418 Bacteria 54749
234 Ga0395900_0000719 3300037418 Bacteria 44009
235 Ga0395900_0002573 3300037418 Bacteria 19864
236 Ga0395898_0000202 3300037466 Bacteria 153541
237 Ga0395898_0001426 3300037466 Bacteria 33975
238 Ga0395898_0019421 3300037466 Bacteria 6915
239 Ga0395898_0022371 3300037466 Bacteria 6403
240 Ga0395905_0000755 3300037471 Bacteria 42658
241 Ga0436364_0852707 3300037853 Bacteria 4747
242 Ga0436364_0906215 3300037853 Bacteria 1980
243 Ga0436364_1026257 3300037853 Bacteria 2196
244 Ga0436364_1067854 3300037853 Bacteria 29581
245 Ga0436364_1221506 3300037853 Bacteria 3660
246 Ga0395901_0002912 3300038443 Bacteria 17284
247 Ga0395901_0003217 3300038443 Bacteria 16430
248 Ga0395901_0013171 3300038443 Bacteria 8397
249 Ga0395901_0463855 3300038443 Bacteria 1294
250 Ga0436365_0053825 3300039437 Bacteria 3635
251 Ga0436365_0168662 3300039437 Bacteria 4412
252 Ga0436365_0284038 3300039437 Bacteria 3601
253 Ga0436365_0314799 3300039437 Bacteria 8387
254 Ga0436365_1163711 3300039437 Bacteria 2454
255 Ga0436365_1268205 3300039437 Bacteria 3244
256 Ga0436365_1360406 3300039437 Bacteria 6440
257 Ga0436365_1601193 3300039437 Bacteria 10996
258 Ga0436363_0681766 3300039450 Bacteria 5664
259 Ga0436362_0850989 3300039453 Bacteria 1455
260 Ga0439438_002425 3300041405 Bacteria 7942
261 Ga0439447_005048 3300041407 Bacteria 4442
262 Ga0451577_0000147 3300042876 Bacteria 155979
263 Ga0466966_0030116 3300044684 Bacteria 3526
264 Ga0466966_0059896 3300044684 Bacteria 2404
265 Ga0466966_0126995 3300044684 Bacteria 1563
266 Ga0466961_0068377 3300044693 Bacteria 2255
267 Ga0466963_0030468 3300044694 Bacteria 3482
268 Ga0466963_0034455 3300044694 Bacteria 3294
269 Ga0466963_0067506 3300044694 Bacteria 2400
270 Ga0466964_0044699 3300044706 Bacteria 1800
271 Ga0453684_0000490 3300044712 Bacteria 155979
272 Ga0466957_0114259 3300044842 Bacteria 1715
273 Ga0466957_0134661 3300044842 Bacteria 1587
274 Ga0466960_0188789 3300044901 Bacteria 1121
275 Ga0466959_0001925 3300045049 Bacteria 13061
276 Ga0466959_0005949 3300045049 Bacteria 8413
277 Ga0466959_0019392 3300045049 Bacteria 5002
278 Ga0466959_0146486 3300045049 Bacteria 1666
279 Ga0466958_0018335 3300045836 Bacteria 4061
280 Ga0466958_0026725 3300045836 Bacteria 3412
281 Ga0466958_0036931 3300045836 Bacteria 2926
282 Ga0466958_0127245 3300045836 Bacteria 1598
283 Ga0466958_0181354 3300045836 Bacteria 1336
284 Ga0466967_0000416 3300045976 Bacteria 20212
285 Ga0466967_0028830 3300045976 Bacteria 4640
286 Ga0466967_0038265 3300045976 Bacteria 4112
287 Ga0466967_0072373 3300045976 Bacteria 3089
288 Ga0466967_0132308 3300045976 Bacteria 2317
289 Ga0466967_0150700 3300045976 Bacteria 2173
290 Ga0466967_0194238 3300045976 Bacteria 1920
291 Ga0466967_0216228 3300045976 Bacteria 1819
292 Ga0495664_0040761 3300046477 Bacteria 2747
293 Ga0495607_0005096 3300046501 Bacteria 9507
294 Ga0495656_0000850 3300046615 Bacteria 9855
295 Ga0495656_0033306 3300046615 Bacteria 2102
296 Ga0495656_0045723 3300046615 Bacteria 1849
297 Ga0495668_0000411 3300046616 Bacteria 55902
298 Ga0495668_0001095 3300046616 Bacteria 28075
299 Ga0495668_0097653 3300046616 Bacteria 1608
300 Ga0495668_0098023 3300046616 Bacteria 1604
301 Ga0495589_0115546 3300046794 Bacteria 1294
302 Ga0495636_0022189 3300047318 Bacteria 2565
303 Ga0495672_0043395 3300047320 Bacteria 2704
304 Ga0496100_0000545 3300048903 Bacteria 17829
305 Ga0496100_0252059 3300048903 Bacteria 1306
306 Ga0496101_0015560 3300048904 Bacteria 5130
307 Ga0496108_0120756 3300048911 Bacteria 2247
308 Ga0496109_0154573 3300048912 Bacteria 2148
309 Ga0496109_0328488 3300048912 Bacteria 1444
310 Ga0496112_0000578 3300048915 Bacteria 25141
311 Ga0496112_0130848 3300048915 Bacteria 2480
312 Ga0496113_0015513 3300048916 Bacteria 5240
313 Ga0496121_0001175 3300048924 Bacteria 45841
314 Ga0496122_0006868 3300048925 Bacteria 12886
315 Ga0496123_0005362 3300048926 Bacteria 12939
316 Ga0496124_0028251 3300048927 Bacteria 5021
317 Ga0496125_0004865 3300048928 Bacteria 15247
318 Ga0501033_0010753 3300049570 Bacteria 7016
319 Ga0501033_0016429 3300049570 Bacteria 5606
320 Ga0501038_0340936 3300049574 Bacteria 1169
321 Ga0501043_0195540 3300049579 Bacteria 1571
322 Ga0501043_0213512 3300049579 Bacteria 1495
323 Ga0501047_0089452 3300049581 Bacteria 2956
324 Ga0501083_0055392 3300049744 Bacteria 2659
325 Ga0501035_0025849 3300049822 Bacteria 5380
326 Ga0501035_0051733 3300049822 Bacteria 3676
327 Ga0501044_0006215 3300049823 Bacteria 13199
328 Ga0501044_0116763 3300049823 Bacteria 2673
329 Ga0501044_0274768 3300049823 Bacteria 1620
330 nmdc:mga00v17_2699_c1 3300050491 Bacteria 9103
331 nmdc:mga00v17_43072_c1 3300050491 Bacteria 2717
332 nmdc:mga00v17_76110_c1 3300050491 Bacteria 2088
333 nmdc:mga00v17_96664_c1 3300050491 Bacteria 1861
334 nmdc:mga0k408_66266_c1 3300050493 Bacteria 2103
335 nmdc:mga09592_288785_c1 3300050508 Bacteria 1422
336 nmdc:mga09592_6147_c1 3300050508 Bacteria 9777
337 nmdc:mga08y16_2145_c1 3300050511 Bacteria 20235
338 nmdc:mga08y16_39808_c1 3300050511 Bacteria 4930
339 nmdc:mga0n895_31298_c1 3300050512 Bacteria 5093
340 nmdc:mga0rr50_206398_c1 3300050513 Bacteria 1617
341 Ga0495619_0255626 3300053085 Bacteria 1214
342 Ga0500651_0058282 3300053093 Bacteria 2415
343 Ga0500634_0000285 3300053161 Bacteria 16218
344 Ga0466962_0010765 3300061719 Bacteria 4396
345 Ga0466962_0077870 3300061719 Bacteria 1585

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300037853 Ga0436364_0852707 Ga0436364_0852707_3841_4737 292
2 3300005445 Ga0070708_100002441 Ga0070708_1000024418 297
3 3300005471 Ga0070698_100063551 Ga0070698_1000635512 297
4 3300021384 Ga0213876_10013253 Ga0213876_100132532 300
5 3300039437 Ga0436365_1601193 Ga0436365_1601193_4371_5348 300
6 3300005468 Ga0070707_100120593 Ga0070707_1001205932 301
7 3300006028 Ga0070717_10000054 Ga0070717_1000005448 301
8 3300025903 Ga0207680_10194443 Ga0207680_101944431 301
9 3300005467 Ga0070706_100000034 Ga0070706_10000003462 302
10 3300025910 Ga0207684_10000240 Ga0207684_1000024054 302
11 3300009147 Ga0114129_10787379 Ga0114129_107873792 303
12 3300005289 Ga0065704_10082799 Ga0065704_100827993 307
13 3300005295 Ga0065707_10108321 Ga0065707_101083213 307
14 3300005328 Ga0070676_10027508 Ga0070676_100275082 307
15 3300005353 Ga0070669_100004717 Ga0070669_1000047174 307
16 3300005441 Ga0070700_100007026 Ga0070700_1000070265 307
17 3300005578 Ga0068854_100044002 Ga0068854_1000440023 307
18 3300005719 Ga0068861_100006832 Ga0068861_1000068323 307
19 3300009094 Ga0111539_10016636 Ga0111539_100166364 307
20 3300009553 Ga0105249_10002944 Ga0105249_100029442 307
21 3300014326 Ga0157380_10001244 Ga0157380_100012446 307
22 3300025923 Ga0207681_10059597 Ga0207681_100595972 307
23 3300026075 Ga0207708_10000741 Ga0207708_100007415 307
24 3300026118 Ga0207675_100010498 Ga0207675_1000104985 307
25 3300028380 Ga0268265_10049492 Ga0268265_100494922 307
26 3300050511 nmdc:mga08y16_39808_c1 nmdc:mga08y16_39808_c1_2088_3047 307
27 2162886012 MBSR1b_contig_3671437 MBSR1b_0664.00003990 308
28 3300005293 Ga0065715_10118565 Ga0065715_101185652 308
29 3300005330 Ga0070690_100056123 Ga0070690_1000561233 308
30 3300005343 Ga0070687_100005631 Ga0070687_1000056313 308
31 3300005544 Ga0070686_100072956 Ga0070686_1000729562 308
32 3300005719 Ga0068861_100088659 Ga0068861_1000886592 308
33 3300006881 Ga0068865_100367207 Ga0068865_1003672071 308
34 3300009093 Ga0105240_10425572 Ga0105240_104255722 308
35 3300009148 Ga0105243_10369605 Ga0105243_103696051 308
36 3300009177 Ga0105248_10625890 Ga0105248_106258902 308
37 3300013308 Ga0157375_10123788 Ga0157375_101237882 308
38 3300025918 Ga0207662_10000542 Ga0207662_1000054214 308
39 3300026075 Ga0207708_10053440 Ga0207708_100534402 308
40 3300026089 Ga0207648_10101179 Ga0207648_101011791 308
41 3300026118 Ga0207675_100055461 Ga0207675_1000554613 308
42 3300048903 Ga0496100_0000545 Ga0496100_0000545_3714_4712 309
43 3300048904 Ga0496101_0015560 Ga0496101_0015560_1008_2006 309
44 3300002239 JGI24034J26672_10000005 JGI24034J26672_1000000564 310
45 3300005467 Ga0070706_100026750 Ga0070706_1000267503 310
46 3300005842 Ga0068858_100003055 Ga0068858_1000030555 310
47 3300006852 Ga0075433_10386500 Ga0075433_103865002 310
48 3300009101 Ga0105247_10000033 Ga0105247_10000033117 310
49 3300009177 Ga0105248_10246912 Ga0105248_102469122 310
50 3300014968 Ga0157379_10158121 Ga0157379_101581212 310
51 3300025223 Ga0207672_1000120 Ga0207672_10001204 310
52 3300025900 Ga0207710_10000001 Ga0207710_1000000182 310
53 3300025910 Ga0207684_10010934 Ga0207684_100109347 310
54 3300026035 Ga0207703_10000700 Ga0207703_1000070037 310
55 3300039437 Ga0436365_1163711 Ga0436365_1163711_916_1890 310
56 3300050512 nmdc:mga0n895_31298_c1 nmdc:mga0n895_31298_c1_3137_4117 310
57 3300005467 Ga0070706_100012784 Ga0070706_1000127848 314
58 3300005468 Ga0070707_100002600 Ga0070707_10000260010 314
59 3300025922 Ga0207646_10001951 Ga0207646_1000195114 314
60 iso_pu_bacteria 2681812866 2681996410 314
61 iso_pu_bacteria 2751185917 2753856727 314
62 iso_pu_bacteria 2927833300 2927833390 314
63 3300003323 rootH1_10000022 rootH1_100000226 316
64 3300026075 Ga0207708_10144445 Ga0207708_101444452 316
65 3300005439 Ga0070711_100023920 Ga0070711_1000239201 317
66 3300025916 Ga0207663_10017676 Ga0207663_100176764 317
67 3300037853 Ga0436364_1067854 Ga0436364_1067854_21796_22758 317
68 3300005289 Ga0065704_10070657 Ga0065704_1007065714 318
69 3300005577 Ga0068857_100000207 Ga0068857_10000020715 318
70 3300006881 Ga0068865_100141315 Ga0068865_1001413152 318
71 3300011119 Ga0105246_10496810 Ga0105246_104968101 318
72 3300021388 Ga0213875_10059480 Ga0213875_100594802 318
73 3300026041 Ga0207639_10286068 Ga0207639_102860682 318
74 3300026075 Ga0207708_10004324 Ga0207708_100043242 318
75 3300026116 Ga0207674_10002163 Ga0207674_1000216315 318
76 3300026121 Ga0207683_10201639 Ga0207683_102016392 318
77 3300027312 Ga0209371_1017251 Ga0209371_10172512 318
78 3300028558 Ga0265326_10000209 Ga0265326_1000020915 318
79 3300028573 Ga0265334_10000266 Ga0265334_1000026616 318
80 3300028666 Ga0265336_10006306 Ga0265336_100063063 318
81 3300028800 Ga0265338_10022084 Ga0265338_100220843 318
82 3300030500 Ga0268256_1019228 Ga0268256_10192282 318
83 3300031711 Ga0265314_10107228 Ga0265314_101072282 318
84 3300031995 Ga0307409_100099328 Ga0307409_1000993283 318
85 3300036647 Ga0316582_0008450 Ga0316582_0008450_359_1330 318
86 3300037853 Ga0436364_1026257 Ga0436364_1026257_669_1643 318
87 3300041405 Ga0439438_002425 Ga0439438_002425_508_1548 318
88 3300044706 Ga0466964_0044699 Ga0466964_0044699_743_1717 318
89 3300044842 Ga0466957_0114259 Ga0466957_0114259_53_1075 318
90 3300045836 Ga0466958_0026725 Ga0466958_0026725_1109_2083 318
91 3300045836 Ga0466958_0127245 Ga0466958_0127245_210_1232 318
92 3300045976 Ga0466967_0000416 Ga0466967_0000416_18691_19653 318
93 3300045976 Ga0466967_0216228 Ga0466967_0216228_94_1068 318
94 3300047320 Ga0495672_0043395 Ga0495672_0043395_1634_2620 318
95 3300048925 Ga0496122_0006868 Ga0496122_0006868_11595_12614 318
96 3300048926 Ga0496123_0005362 Ga0496123_0005362_11669_12688 318
97 3300048927 Ga0496124_0028251 Ga0496124_0028251_3924_4910 318
98 3300048928 Ga0496125_0004865 Ga0496125_0004865_12325_13344 318
99 3300061719 Ga0466962_0010765 Ga0466962_0010765_2121_3143 318
100 3300005329 Ga0070683_100135058 Ga0070683_1001350582 319
101 3300005345 Ga0070692_10006831 Ga0070692_100068311 319
102 3300005353 Ga0070669_100002090 Ga0070669_1000020905 319
103 3300005366 Ga0070659_100000003 Ga0070659_100000003151 319
104 3300005435 Ga0070714_100000026 Ga0070714_100000026148 319
105 3300005435 Ga0070714_100002819 Ga0070714_10000281910 319
106 3300005435 Ga0070714_100014528 Ga0070714_1000145283 319
107 3300005437 Ga0070710_10000001 Ga0070710_10000001364 319
108 3300005440 Ga0070705_100002831 Ga0070705_1000028317 319
109 3300005458 Ga0070681_10130916 Ga0070681_101309162 319
110 3300005530 Ga0070679_100304623 Ga0070679_1003046231 319
111 3300006028 Ga0070717_10000005 Ga0070717_10000005295 319
112 3300006028 Ga0070717_10084844 Ga0070717_100848442 319
113 3300006175 Ga0070712_100000629 Ga0070712_10000062915 319
114 3300006844 Ga0075428_100189659 Ga0075428_1001896592 319
115 3300006880 Ga0075429_100009632 Ga0075429_1000096324 319
116 3300011119 Ga0105246_10020409 Ga0105246_100204092 319
117 3300013308 Ga0157375_10317720 Ga0157375_103177202 319
118 3300014969 Ga0157376_10054920 Ga0157376_100549202 319
119 3300021377 Ga0213874_10013417 Ga0213874_100134173 319
120 3300021384 Ga0213876_10009958 Ga0213876_100099585 319
121 3300021384 Ga0213876_10028941 Ga0213876_100289412 319
122 3300021384 Ga0213876_10121333 Ga0213876_101213332 319
123 3300025898 Ga0207692_10000007 Ga0207692_1000000736 319
124 3300025912 Ga0207707_10123019 Ga0207707_101230192 319
125 3300025915 Ga0207693_10000648 Ga0207693_1000064815 319
126 3300025923 Ga0207681_10001285 Ga0207681_1000128512 319
127 3300025928 Ga0207700_10115606 Ga0207700_101156062 319
128 3300025929 Ga0207664_10000012 Ga0207664_1000001234 319
129 3300025929 Ga0207664_10002615 Ga0207664_1000261511 319
130 3300025929 Ga0207664_10076026 Ga0207664_100760262 319
131 3300025932 Ga0207690_10000021 Ga0207690_10000021182 319
132 3300028563 Ga0265319_1003036 Ga0265319_10030365 319
133 3300028800 Ga0265338_10006336 Ga0265338_1000633616 319
134 3300031548 Ga0307408_100331275 Ga0307408_1003312751 319
135 3300031711 Ga0265314_10046068 Ga0265314_100460682 319
136 3300032002 Ga0307416_100183760 Ga0307416_1001837602 319
137 3300037853 Ga0436364_0906215 Ga0436364_0906215_108_1085 319
138 3300037853 Ga0436364_1221506 Ga0436364_1221506_70_1047 319
139 3300039437 Ga0436365_0168662 Ga0436365_0168662_2846_3823 319
140 3300039437 Ga0436365_0284038 Ga0436365_0284038_512_1489 319
141 3300039437 Ga0436365_0314799 Ga0436365_0314799_2313_3290 319
142 3300039437 Ga0436365_1268205 Ga0436365_1268205_686_1663 319
143 3300039437 Ga0436365_1360406 Ga0436365_1360406_5068_6093 319
144 3300039450 Ga0436363_0681766 Ga0436363_0681766_1124_2101 319
145 3300039453 Ga0436362_0850989 Ga0436362_0850989_286_1263 319
146 3300044684 Ga0466966_0059896 Ga0466966_0059896_747_1724 319
147 3300044684 Ga0466966_0126995 Ga0466966_0126995_90_1073 319
148 3300044693 Ga0466961_0068377 Ga0466961_0068377_410_1387 319
149 3300044694 Ga0466963_0030468 Ga0466963_0030468_643_1620 319
150 3300044694 Ga0466963_0067506 Ga0466963_0067506_321_1298 319
151 3300044842 Ga0466957_0134661 Ga0466957_0134661_350_1327 319
152 3300044901 Ga0466960_0188789 Ga0466960_0188789_89_1072 319
153 3300045049 Ga0466959_0005949 Ga0466959_0005949_4812_5789 319
154 3300045049 Ga0466959_0019392 Ga0466959_0019392_3692_4678 319
155 3300045836 Ga0466958_0036931 Ga0466958_0036931_334_1311 319
156 3300045836 Ga0466958_0181354 Ga0466958_0181354_281_1258 319
157 3300045976 Ga0466967_0038265 Ga0466967_0038265_266_1243 319
158 3300045976 Ga0466967_0072373 Ga0466967_0072373_1876_2859 319
159 3300045976 Ga0466967_0132308 Ga0466967_0132308_561_1538 319
160 3300045976 Ga0466967_0194238 Ga0466967_0194238_259_1233 319
161 3300046477 Ga0495664_0040761 Ga0495664_0040761_146_1135 319
162 3300048915 Ga0496112_0000578 Ga0496112_0000578_24071_25069 319
163 3300048916 Ga0496113_0015513 Ga0496113_0015513_1972_2970 319
164 3300050508 nmdc:mga09592_6147_c1 nmdc:mga09592_6147_c1_4612_5610 319
165 3300050513 nmdc:mga0rr50_206398_c1 nmdc:mga0rr50_206398_c1_268_1266 319
166 3300053085 Ga0495619_0255626 Ga0495619_0255626_23_1000 319
167 3300009176 Ga0105242_10215752 Ga0105242_102157522 320
168 3300031727 Ga0316576_10009267 Ga0316576_100092673 320
169 3300031727 Ga0316576_10024694 Ga0316576_100246943 320
170 3300035398 Ga0316574_0044798 Ga0316574_0044798_345_1316 320
171 3300035398 Ga0316574_0155370 Ga0316574_0155370_133_1104 320
172 3300045049 Ga0466959_0146486 Ga0466959_0146486_131_1117 320
173 3300046616 Ga0495668_0097653 Ga0495668_0097653_114_1094 320
174 3300046794 Ga0495589_0115546 Ga0495589_0115546_301_1281 320
175 iso_pu_bacteria 2643221559 2643818419 320
176 iso_pu_bacteria 2643221579 2643907268 320
177 iso_pu_bacteria 2643221586 2643938440 320
178 iso_pu_bacteria 2643221612 2644079092 320
179 iso_pu_bacteria 2643221727 2644693868 320
180 iso_pu_bacteria 8003014200 8003015280 320
181 3300003771 Ga0055526_1000022 Ga0055526_1000022103 321
182 3300003773 Ga0055537_1000009 Ga0055537_100000997 321
183 3300003775 Ga0055524_1000036 Ga0055524_1000036103 321
184 3300003784 Ga0055534_1000010 Ga0055534_100001048 321
185 3300003790 Ga0055528_1000014 Ga0055528_1000014103 321
186 3300005347 Ga0070668_100167411 Ga0070668_1001674112 321
187 3300005844 Ga0068862_100407630 Ga0068862_1004076302 321
188 3300009094 Ga0111539_10037338 Ga0111539_100373385 321
189 3300009553 Ga0105249_10542527 Ga0105249_105425271 321
190 3300025263 Ga0209565_1000001 Ga0209565_1000001881 321
191 3300025273 Ga0209673_1000001 Ga0209673_1000001881 321
192 3300025291 Ga0209675_1000001 Ga0209675_10000011652 321
193 3300025295 Ga0209564_1000001 Ga0209564_10000011814 321
194 3300025299 Ga0209256_1000006 Ga0209256_1000006250 321
195 3300025972 Ga0207668_10096977 Ga0207668_100969773 321
196 3300044694 Ga0466963_0034455 Ga0466963_0034455_96_1109 321
197 3300045976 Ga0466967_0028830 Ga0466967_0028830_2656_3669 321
198 3300046616 Ga0495668_0001095 Ga0495668_0001095_16493_17458 321
199 3300050511 nmdc:mga08y16_2145_c1 nmdc:mga08y16_2145_c1_11104_12096 321
200 iso_pu_bacteria 2522572158 2523107795 321
201 iso_pu_bacteria 2643221577 2643893990 321
202 iso_pu_bacteria 2643221685 2644476210 321
203 3300005289 Ga0065704_10089910 Ga0065704_100899102 322
204 3300005295 Ga0065707_10088909 Ga0065707_100889094 322
205 3300005842 Ga0068858_100043072 Ga0068858_1000430724 322
206 3300031344 Ga0265316_10024096 Ga0265316_100240963 322
207 3300005536 Ga0070697_100001371 Ga0070697_10000137117 323
208 3300005618 Ga0068864_100503552 Ga0068864_1005035521 323
209 3300005937 Ga0081455_10019031 Ga0081455_100190317 323
210 3300006195 Ga0075366_10111896 Ga0075366_101118962 323
211 3300015685 Ga0183369_1013 Ga0183369_1013155 323
212 3300015689 Ga0183360_10001 Ga0183360_100012808 323
213 3300021384 Ga0213876_10040552 Ga0213876_100405522 323
214 3300025263 Ga0209565_1004872 Ga0209565_10048723 323
215 3300025931 Ga0207644_10141925 Ga0207644_101419252 323
216 3300031901 Ga0307406_10000994 Ga0307406_100009945 323
217 3300037312 Ga0395899_0004832 Ga0395899_0004832_6346_7353 323
218 3300037418 Ga0395900_0002573 Ga0395900_0002573_12025_12996 323
219 3300037471 Ga0395905_0000755 Ga0395905_0000755_28388_29359 323
220 3300038443 Ga0395901_0002912 Ga0395901_0002912_3213_4184 323
221 3300038443 Ga0395901_0463855 Ga0395901_0463855_26_997 323
222 3300039437 Ga0436365_0053825 Ga0436365_0053825_1528_2529 323
223 3300041407 Ga0439447_005048 Ga0439447_005048_2357_3400 323
224 3300046501 Ga0495607_0005096 Ga0495607_0005096_8076_9047 323
225 3300046615 Ga0495656_0000850 Ga0495656_0000850_1292_2263 323
226 3300046615 Ga0495656_0033306 Ga0495656_0033306_956_1927 323
227 3300046616 Ga0495668_0000411 Ga0495668_0000411_33379_34422 323
228 3300047318 Ga0495636_0022189 Ga0495636_0022189_617_1588 323
229 3300048903 Ga0496100_0252059 Ga0496100_0252059_151_1122 323
230 3300048911 Ga0496108_0120756 Ga0496108_0120756_351_1322 323
231 3300048912 Ga0496109_0154573 Ga0496109_0154573_971_1942 323
232 3300048915 Ga0496112_0130848 Ga0496112_0130848_995_1966 323
233 3300048924 Ga0496121_0001175 Ga0496121_0001175_31462_32502 323
234 3300049823 Ga0501044_0274768 Ga0501044_0274768_425_1399 323
235 3300050493 nmdc:mga0k408_66266_c1 nmdc:mga0k408_66266_c1_85_1089 323
236 iso_pu_bacteria 2995948881 2995951783 323
237 2162886007 SwRhRL2b_contig_353042 SwRhRL2b_0235.00008120 324
238 3300002737 JGI25162J39368_1000403 JGI25162J39368_10004038 324
239 3300002772 JGI25164J39214_1000360 JGI25164J39214_10003602 324
240 3300003187 JGI25151J46595_10010995 JGI25151J46595_100109953 324
241 3300003214 JGI25165J46597_1000419 JGI25165J46597_10004198 324
242 3300003316 rootH1_10068307 rootH1_100683072 324
243 3300003320 rootH2_10019989 rootH2_100199898 324
244 3300003761 Ga0055535_1000253 Ga0055535_100025314 324
245 3300003762 Ga0055542_1000104 Ga0055542_100010447 324
246 3300003775 Ga0055524_1005871 Ga0055524_10058715 324
247 3300003775 Ga0055524_1021645 Ga0055524_10216452 324
248 3300003781 Ga0055536_1005372 Ga0055536_10053725 324
249 3300003781 Ga0055536_1009297 Ga0055536_10092972 324
250 3300003791 Ga0055530_10003834 Ga0055530_100038343 324
251 3300003794 Ga0055531_10021761 Ga0055531_100217612 324
252 3300003794 Ga0055531_10035893 Ga0055531_100358931 324
253 3300005289 Ga0065704_10070491 Ga0065704_1007049115 324
254 3300005339 Ga0070660_100065092 Ga0070660_1000650923 324
255 3300005344 Ga0070661_100109343 Ga0070661_1001093432 324
256 3300005353 Ga0070669_100037623 Ga0070669_1000376233 324
257 3300005437 Ga0070710_10066550 Ga0070710_100665503 324
258 3300005457 Ga0070662_100202539 Ga0070662_1002025392 324
259 3300005458 Ga0070681_10058251 Ga0070681_100582513 324
260 3300005530 Ga0070679_100203538 Ga0070679_1002035381 324
261 3300005543 Ga0070672_100025988 Ga0070672_1000259885 324
262 3300005546 Ga0070696_100012408 Ga0070696_1000124084 324
263 3300005563 Ga0068855_100149875 Ga0068855_1001498752 324
264 3300005719 Ga0068861_100365762 Ga0068861_1003657621 324
265 3300005983 Ga0081540_1002021 Ga0081540_10020214 324
266 3300006051 Ga0075364_10002576 Ga0075364_100025768 324
267 3300006051 Ga0075364_10086709 Ga0075364_100867092 324
268 3300006051 Ga0075364_10176691 Ga0075364_101766913 324
269 3300006844 Ga0075428_100076163 Ga0075428_1000761632 324
270 3300009093 Ga0105240_10023608 Ga0105240_100236082 324
271 3300009094 Ga0111539_10170666 Ga0111539_101706662 324
272 3300009174 Ga0105241_10016320 Ga0105241_100163201 324
273 3300009551 Ga0105238_10040571 Ga0105238_100405713 324
274 3300009551 Ga0105238_10118227 Ga0105238_101182272 324
275 3300013102 Ga0157371_10146139 Ga0157371_101461392 324
276 3300013297 Ga0157378_10204065 Ga0157378_102040652 324
277 3300013306 Ga0163162_10055913 Ga0163162_100559133 324
278 3300013307 Ga0157372_10738356 Ga0157372_107383561 324
279 3300013308 Ga0157375_10062897 Ga0157375_100628972 324
280 3300014497 Ga0182008_10010037 Ga0182008_100100372 324
281 3300017792 Ga0163161_10027185 Ga0163161_100271854 324
282 3300025228 Ga0209672_100338 Ga0209672_10033812 324
283 3300025231 Ga0207427_100078 Ga0207427_10007896 324
284 3300025233 Ga0209437_100090 Ga0209437_10009075 324
285 3300025242 Ga0209258_100045 Ga0209258_100045174 324
286 3300025254 Ga0209148_1000052 Ga0209148_1000052174 324
287 3300025261 Ga0209233_1000077 Ga0209233_1000077172 324
288 3300025272 Ga0209455_1002022 Ga0209455_10020226 324
289 3300025284 Ga0209130_1003814 Ga0209130_10038143 324
290 3300025291 Ga0209675_1017797 Ga0209675_10177973 324
291 3300025292 Ga0209676_1001495 Ga0209676_10014959 324
292 3300025292 Ga0209676_1003105 Ga0209676_10031057 324
293 3300025292 Ga0209676_1005188 Ga0209676_10051887 324
294 3300025292 Ga0209676_1007417 Ga0209676_10074175 324
295 3300025294 Ga0209025_1001439 Ga0209025_10014393 324
296 3300025295 Ga0209564_1008059 Ga0209564_10080595 324
297 3300025297 Ga0209758_1020374 Ga0209758_10203742 324
298 3300025298 Ga0209050_1000712 Ga0209050_100071240 324
299 3300025299 Ga0209256_1002032 Ga0209256_10020329 324
300 3300025299 Ga0209256_1003634 Ga0209256_10036347 324
301 3300025303 Ga0209051_1007240 Ga0209051_10072406 324
302 3300025304 Ga0209257_1001551 Ga0209257_10015512 324
303 3300025304 Ga0209257_1001785 Ga0209257_10017852 324
304 3300025904 Ga0207647_10017289 Ga0207647_100172894 324
305 3300025909 Ga0207705_10014586 Ga0207705_100145865 324
306 3300025909 Ga0207705_10155167 Ga0207705_101551672 324
307 3300025913 Ga0207695_10057786 Ga0207695_100577864 324
308 3300025919 Ga0207657_10024421 Ga0207657_100244214 324
309 3300025919 Ga0207657_10150049 Ga0207657_101500492 324
310 3300025921 Ga0207652_10060508 Ga0207652_100605082 324
311 3300025924 Ga0207694_10127772 Ga0207694_101277722 324
312 3300025932 Ga0207690_10000207 Ga0207690_100002077 324
313 3300025933 Ga0207706_10233705 Ga0207706_102337052 324
314 3300025940 Ga0207691_10014727 Ga0207691_100147275 324
315 3300025940 Ga0207691_10071441 Ga0207691_100714412 324
316 3300026118 Ga0207675_100302358 Ga0207675_1003023582 324
317 3300031731 Ga0307405_10397592 Ga0307405_103975921 324
318 3300032004 Ga0307414_10310381 Ga0307414_103103811 324
319 3300037312 Ga0395899_0003933 Ga0395899_0003933_1519_2496 324
320 3300037312 Ga0395899_0007547 Ga0395899_0007547_5059_6033 324
321 3300037418 Ga0395900_0000514 Ga0395900_0000514_15392_16369 324
322 3300037418 Ga0395900_0000719 Ga0395900_0000719_37977_38951 324
323 3300037466 Ga0395898_0000202 Ga0395898_0000202_133304_134278 324
324 3300037466 Ga0395898_0001426 Ga0395898_0001426_23730_24707 324
325 3300037466 Ga0395898_0019421 Ga0395898_0019421_883_1857 324
326 3300037466 Ga0395898_0022371 Ga0395898_0022371_293_1279 324
327 3300038443 Ga0395901_0003217 Ga0395901_0003217_3111_4088 324
328 3300038443 Ga0395901_0013171 Ga0395901_0013171_2365_3339 324
329 3300042876 Ga0451577_0000147 Ga0451577_0000147_83259_84233 324
330 3300044684 Ga0466966_0030116 Ga0466966_0030116_223_1203 324
331 3300044712 Ga0453684_0000490 Ga0453684_0000490_83259_84233 324
332 3300045049 Ga0466959_0001925 Ga0466959_0001925_9448_10422 324
333 3300045836 Ga0466958_0018335 Ga0466958_0018335_1263_2237 324
334 3300045976 Ga0466967_0150700 Ga0466967_0150700_813_1787 324
335 3300046615 Ga0495656_0045723 Ga0495656_0045723_76_1050 324
336 3300046616 Ga0495668_0098023 Ga0495668_0098023_493_1467 324
337 3300048912 Ga0496109_0328488 Ga0496109_0328488_390_1364 324
338 3300049570 Ga0501033_0010753 Ga0501033_0010753_965_1939 324
339 3300049570 Ga0501033_0016429 Ga0501033_0016429_2851_3828 324
340 3300049574 Ga0501038_0340936 Ga0501038_0340936_60_1037 324
341 3300049579 Ga0501043_0195540 Ga0501043_0195540_105_1079 324
342 3300049579 Ga0501043_0213512 Ga0501043_0213512_382_1359 324
343 3300049581 Ga0501047_0089452 Ga0501047_0089452_1699_2673 324
344 3300049744 Ga0501083_0055392 Ga0501083_0055392_599_1612 324
345 3300049822 Ga0501035_0025849 Ga0501035_0025849_3768_4742 324
346 3300049822 Ga0501035_0051733 Ga0501035_0051733_1317_2294 324
347 3300049823 Ga0501044_0006215 Ga0501044_0006215_11605_12582 324
348 3300049823 Ga0501044_0116763 Ga0501044_0116763_515_1489 324
349 3300050491 nmdc:mga00v17_2699_c1 nmdc:mga00v17_2699_c1_5591_6571 324
350 3300050491 nmdc:mga00v17_43072_c1 nmdc:mga00v17_43072_c1_1070_2047 324
351 3300050491 nmdc:mga00v17_76110_c1 nmdc:mga00v17_76110_c1_275_1444 324
352 3300050491 nmdc:mga00v17_96664_c1 nmdc:mga00v17_96664_c1_569_1567 324
353 3300050508 nmdc:mga09592_288785_c1 nmdc:mga09592_288785_c1_311_1330 324
354 3300053093 Ga0500651_0058282 Ga0500651_0058282_917_1927 324
355 3300053161 Ga0500634_0000285 Ga0500634_0000285_14780_15754 324
356 3300061719 Ga0466962_0077870 Ga0466962_0077870_319_1293 324

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

68

316

0.95

PF04321

RmlD_sub_bind

RmlD substrate binding domain

65

234

0.93

PF07993

NAD_binding_4

Male sterility protein

111

280

0.82

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

69

380

0.82

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

69

234

0.8

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

68

241

0.77

PF13460

NAD_binding_10

NAD(P)H-binding

72

231

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
2c20-assembly3.cif.gz_F crystal structure of udp-glucose 4-epimerase 0.9766 1 320
4wok-assembly1.cif.gz_A crystal structure of udp-glucose 4-epimerase from brucella ovis in complex with nad 0.9759 2 316
3enk-assembly1.cif.gz_B 1.9a crystal structure of udp-glucose 4-epimerase from burkholderia pseudomallei 0.97 2 320
7xpq-assembly1.cif.gz_A crystal structure of udp-glc/glcnac 4-epimerase with nad/udp-glcnac 0.9694 2 320
2c20-assembly3.cif.gz_F crystal structure of udp-glucose 4-epimerase 0.9618 1 320
ID Description Score Start End Superfamily
2c20D02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9605 172 320 3.90.25.10
4wokA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9604 2 251 3.40.50.720
2c20A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9542 1 251 3.40.50.720
2c20A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9496 1 251 3.40.50.720
4wokA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9465 2 251 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1W9LJM9-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.9929 2 161 GO:0016853
GO:0033499
AF-A0A7U5Z2E3-F1-model_v4 deleted 0.9885 1 324
AF-A0A1G9GU68-F1-model_v4 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.987 1 321 GO:0003978
GO:0033499
AF-A0A7X8QVT9-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.9856 3 159
AF-A0A7U5Z2E3-F1-model_v4 deleted 0.9855 1 324

Feature Viewer

pLDDT pTM Quality
95.52 0.93 High
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Predicted Structure (AlphaFold2)

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