F419536

General Info

Members Datasets Scaffolds Average Seq Length
353 211 339 343

Family's Representative Sequence

Representative Sequence 3300049578|Ga0501042_0107276|Ga0501042_0107276_538_1605
Length 355
Sequence MPSDSKPLLAITMGDPAGIGPEITVKALQNADVFKECRPLVVGDAMVLRNALGFMKSPLKPNVVSSPDQATGTPGTLDLLDLHNLDASSFQLGKVSAAAGEAAFQAITHSIQLAVEDKIDGVVTNPIHKEALHLAGHKFPGHTEIFAHYTGSKESVMMLAEGHFRVAHVSTHVALREAVLRCTKERVLRVIELAAQGCRDLGIADPHVGVAGLNPHAGEHGLFGDEEETAITPAIKEAQTRGIRASGPYPADTFFPRAAGGKGEFDICIAMYHDQGHVAVKMRGFSFDPAKGTWNAVRGINVSLGLPIIRVSVDHGTAFDIAGKGIASEASLLDAIAYAARMAHQRIERRAAAKK

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
4 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
5 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
6 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
7 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
8 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
9 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
10 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
11 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
12 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
13 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
14 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
15 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
16 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
17 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
18 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
19 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
20 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
21 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
22 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
23 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
24 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
25 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
26 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
27 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
28 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
29 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
30 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
31 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
32 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
33 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
34 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
35 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
36 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
37 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
38 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
39 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
42 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
43 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
44 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
45 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
46 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
49 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
50 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
51 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
52 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
53 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
54 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
55 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
56 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
57 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
58 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
59 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
60 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
61 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
62 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
63 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
66 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
69 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
74 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
75 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
76 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
77 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
78 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
79 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
80 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
81 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
82 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
83 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
84 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
85 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
86 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
87 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
88 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
89 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
92 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
94 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
120 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
121 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
122 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
123 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
124 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
125 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
126 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
127 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
128 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
129 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
130 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
131 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
132 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
133 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
134 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
135 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
136 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
137 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
138 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
139 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
140 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
141 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
142 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
143 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
144 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
145 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
146 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
147 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
148 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
149 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
150 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
151 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
152 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
153 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
154 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
155 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
156 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
157 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
158 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
159 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
160 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
161 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
162 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
163 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
164 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
165 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
166 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
167 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
168 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
169 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
170 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
171 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
172 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
173 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
174 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
175 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
176 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
177 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
178 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
179 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
188 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
189 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
190 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
191 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
192 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
193 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
196 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
197 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
198 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
199 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
200 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
201 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
202 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
203 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
204 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
205 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
206 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
207 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
208 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
209 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
210 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
211 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.03
Metatranscriptomes 0
Isolates 3.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.78
Nodule 0
Rhizoplane 0.28
Rhizosphere 81.3
Stem 0
Stem Tuber 0
Unclassified 9.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10001080 3300001979 Bacteria 12319
2 JGI24740J21852_10016214 3300001979 Bacteria 2697
3 JGI24739J22299_10010561 3300001989 Bacteria 3427
4 JGI24737J22298_10000413 3300001990 Bacteria 14625
5 JGI24735J21928_10000029 3300002067 Bacteria 81143
6 JGI25157J39369_1003644 3300002741 Bacteria 3056
7 JGI25153J46596_10001088 3300003215 Bacteria 16560
8 rootH1_10023928 3300003316 Bacteria 22841
9 rootH2_10001334 3300003320 Bacteria 238709
10 rootH2_10037192 3300003320 Bacteria 39592
11 rootH2_10075092 3300003320 Bacteria 12293
12 rootL2_10215357 3300003322 Bacteria 2380
13 rootH1_10008837 3300003323 Bacteria 37199
14 rootH1_10147528 3300003323 Bacteria 5580
15 rootH1_10204566 3300003323 Bacteria 3243
16 rootH1_10230304 3300003323 Bacteria 5237
17 JGI25160J50197_1000466 3300003354 Bacteria 25036
18 Ga0055526_1002628 3300003771 Bacteria 11995
19 Ga0055528_1001498 3300003790 Bacteria 14165
20 Ga0055530_10000556 3300003791 Bacteria 32375
21 Ga0055543_1018340 3300004625 Bacteria 1306
22 Ga0065165_1000743 3300005262 Bacteria 45003
23 Ga0065712_10068823 3300005290 Bacteria 8889
24 Ga0065712_10103803 3300005290 Bacteria 1976
25 Ga0065707_10010277 3300005295 Bacteria 2545
26 Ga0065707_10093012 3300005295 Unclassified 3687
27 Ga0070658_10032064 3300005327 Bacteria 4224
28 Ga0070683_100035830 3300005329 Unclassified 4537
29 Ga0070670_100117171 3300005331 Bacteria 2297
30 Ga0070689_100190683 3300005340 Bacteria 1669
31 Ga0070671_100037377 3300005355 Bacteria 4026
32 Ga0070674_100047146 3300005356 Unclassified 2951
33 Ga0070659_100000283 3300005366 Bacteria 39665
34 Ga0070701_10162267 3300005438 Bacteria 1295
35 Ga0068867_100045838 3300005459 Bacteria 3208
36 Ga0070685_10001966 3300005466 Bacteria 10673
37 Ga0070698_100000492 3300005471 Bacteria 41984
38 Ga0070698_100003362 3300005471 Bacteria 17606
39 Ga0070698_100008107 3300005471 Bacteria 11358
40 Ga0070698_100164514 3300005471 Bacteria 2161
41 Ga0070699_100149218 3300005518 Bacteria 2067
42 Ga0070684_100003317 3300005535 Bacteria 12057
43 Ga0068853_100125879 3300005539 Bacteria 2289
44 Ga0070686_100070405 3300005544 Bacteria 2287
45 Ga0070665_100000066 3300005548 Bacteria 212791
46 Ga0068855_100005854 3300005563 Bacteria 15007
47 Ga0068855_100189044 3300005563 Bacteria 2324
48 Ga0068855_100224887 3300005563 Bacteria 2103
49 Ga0068857_100012390 3300005577 Bacteria 7422
50 Ga0068857_100024856 3300005577 Bacteria 5276
51 Ga0068857_100038781 3300005577 Bacteria 4218
52 Ga0068854_100230295 3300005578 Bacteria 1470
53 Ga0068856_100042286 3300005614 Unclassified 4482
54 Ga0070702_100216516 3300005615 Bacteria 1278
55 Ga0068852_100000466 3300005616 Bacteria 26645
56 Ga0068852_100154705 3300005616 Bacteria 2135
57 Ga0068852_100259600 3300005616 Bacteria 1668
58 Ga0068859_100009731 3300005617 Bacteria 9707
59 Ga0068864_100028595 3300005618 Bacteria 4714
60 Ga0068861_100024853 3300005719 Bacteria 4337
61 Ga0068863_100202887 3300005841 Bacteria 1908
62 Ga0068860_100112465 3300005843 Bacteria 2604
63 Ga0068862_100029076 3300005844 Bacteria 4655
64 Ga0068862_100254383 3300005844 Bacteria 1602
65 Ga0068862_100317144 3300005844 Unclassified 1438
66 Ga0075366_10000226 3300006195 Bacteria 25110
67 Ga0075366_10001822 3300006195 Bacteria 10765
68 Ga0075366_10007993 3300006195 Bacteria 5859
69 Ga0075428_100016849 3300006844 Bacteria 8071
70 Ga0075428_100044894 3300006844 Bacteria 4856
71 Ga0075428_100105157 3300006844 Bacteria 3079
72 Ga0075430_100066682 3300006846 Bacteria 3023
73 Ga0075431_100019293 3300006847 Bacteria 6950
74 Ga0097620_100009731 3300006931 Bacteria 9707
75 Ga0105240_10000010 3300009093 Bacteria 537830
76 Ga0105240_10000140 3300009093 Bacteria 148591
77 Ga0105240_10000384 3300009093 Bacteria 82999
78 Ga0105240_10005104 3300009093 Bacteria 19658
79 Ga0105240_10007975 3300009093 Bacteria 15271
80 Ga0105240_10014431 3300009093 Bacteria 10787
81 Ga0105240_10051266 3300009093 Bacteria 5196
82 Ga0111539_10286990 3300009094 Bacteria 1915
83 Ga0114129_10000792 3300009147 Bacteria 40543
84 Ga0114129_10070774 3300009147 Bacteria 4864
85 Ga0114129_10305427 3300009147 Unclassified 2119
86 Ga0105241_10025515 3300009174 Bacteria 4392
87 Ga0105241_10072159 3300009174 Unclassified 2682
88 Ga0105242_10022352 3300009176 Bacteria 4972
89 Ga0105248_10232061 3300009177 Bacteria 2077
90 Ga0105237_10000142 3300009545 Bacteria 101678
91 Ga0105237_10000177 3300009545 Bacteria 90045
92 Ga0105237_10000243 3300009545 Bacteria 77722
93 Ga0105237_10025169 3300009545 Bacteria 6088
94 Ga0105237_10058421 3300009545 Bacteria 3860
95 Ga0105237_10108444 3300009545 Bacteria 2768
96 Ga0105237_10117119 3300009545 Unclassified 2658
97 Ga0105238_10001734 3300009551 Bacteria 21948
98 Ga0105238_10009953 3300009551 Bacteria 9533
99 Ga0105238_10328340 3300009551 Unclassified 1516
100 Ga0105249_10001212 3300009553 Bacteria 22738
101 Ga0105249_10004156 3300009553 Bacteria 12503
102 Ga0105249_10026588 3300009553 Bacteria 5217
103 Ga0105249_10423768 3300009553 Bacteria 1365
104 Ga0105239_10000890 3300010375 Bacteria 42373
105 Ga0105239_10005224 3300010375 Bacteria 15281
106 Ga0105239_10107056 3300010375 Bacteria 3097
107 Ga0105239_10512758 3300010375 Bacteria 1364
108 Ga0157373_10001072 3300013100 Bacteria 21023
109 Ga0157371_10020427 3300013102 Unclassified 4873
110 Ga0157371_10121840 3300013102 Bacteria 1854
111 Ga0157371_10276610 3300013102 Bacteria 1212
112 Ga0157370_10020209 3300013104 Bacteria 6654
113 Ga0157370_10030576 3300013104 Bacteria 5276
114 Ga0157370_10398403 3300013104 Bacteria 1267
115 Ga0157369_10000039 3300013105 Bacteria 188947
116 Ga0157369_10027778 3300013105 Bacteria 6267
117 Ga0157369_10107532 3300013105 Bacteria 2967
118 Ga0157369_10409350 3300013105 Bacteria 1406
119 Ga0157369_10485802 3300013105 Bacteria 1278
120 Ga0157374_10000004 3300013296 Bacteria 759774
121 Ga0157378_10077653 3300013297 Bacteria 2994
122 Ga0163162_10003325 3300013306 Bacteria 15386
123 Ga0163162_10003890 3300013306 Bacteria 14334
124 Ga0163162_10276102 3300013306 Bacteria 1812
125 Ga0157372_10000001 3300013307 Bacteria 791349
126 Ga0157372_10002023 3300013307 Bacteria 22030
127 Ga0157372_10015819 3300013307 Bacteria 8093
128 Ga0157372_10107298 3300013307 Bacteria 3195
129 Ga0157372_10216907 3300013307 Unclassified 2218
130 Ga0157375_10014547 3300013308 Bacteria 7024
131 Ga0157380_10003918 3300014326 Bacteria 10266
132 Ga0157380_10059646 3300014326 Bacteria 3046
133 Ga0157376_10116099 3300014969 Bacteria 2364
134 Ga0163161_10001010 3300017792 Bacteria 21437
135 Ga0209646_1002377 3300025246 Bacteria 4214
136 Ga0209026_1000423 3300025250 Bacteria 35891
137 Ga0209026_1001164 3300025250 Bacteria 12249
138 Ga0209026_1002344 3300025250 Bacteria 7165
139 Ga0209673_1000438 3300025273 Bacteria 71700
140 Ga0209564_1000606 3300025295 Bacteria 55783
141 Ga0209758_1000409 3300025297 Bacteria 73316
142 Ga0209050_1000438 3300025298 Bacteria 76226
143 Ga0207426_1000444 3300025302 Bacteria 66461
144 Ga0207426_1001316 3300025302 Bacteria 21180
145 Ga0209257_1001172 3300025304 Bacteria 33158
146 Ga0207647_10013498 3300025904 Bacteria 5658
147 Ga0207705_10144960 3300025909 Bacteria 1776
148 Ga0207654_10030589 3300025911 Bacteria 2957
149 Ga0207695_10000019 3300025913 Bacteria 732137
150 Ga0207695_10000027 3300025913 Bacteria 612456
151 Ga0207695_10000076 3300025913 Bacteria 307969
152 Ga0207695_10000090 3300025913 Bacteria 272143
153 Ga0207695_10000560 3300025913 Bacteria 76436
154 Ga0207695_10009478 3300025913 Bacteria 12042
155 Ga0207695_10073113 3300025913 Bacteria 3495
156 Ga0207695_10086949 3300025913 Bacteria 3150
157 Ga0207671_10002458 3300025914 Bacteria 19791
158 Ga0207671_10003139 3300025914 Bacteria 16769
159 Ga0207671_10003493 3300025914 Bacteria 15621
160 Ga0207671_10007540 3300025914 Bacteria 9421
161 Ga0207671_10044751 3300025914 Bacteria 3273
162 Ga0207671_10141541 3300025914 Bacteria 1853
163 Ga0207657_10014290 3300025919 Bacteria 7758
164 Ga0207694_10036913 3300025924 Unclassified 3750
165 Ga0207694_10125477 3300025924 Bacteria 2053
166 Ga0207650_10162997 3300025925 Bacteria 1768
167 Ga0207644_10094246 3300025931 Bacteria 2236
168 Ga0207690_10001800 3300025932 Bacteria 13172
169 Ga0207686_10150958 3300025934 Bacteria 1617
170 Ga0207667_10000230 3300025949 Bacteria 77858
171 Ga0207667_10002222 3300025949 Bacteria 24367
172 Ga0207667_10158588 3300025949 Bacteria 2328
173 Ga0207667_10424879 3300025949 Unclassified 1352
174 Ga0207667_10470734 3300025949 Bacteria 1276
175 Ga0207712_10000825 3300025961 Bacteria 22741
176 Ga0207712_10019124 3300025961 Bacteria 4469
177 Ga0207640_10037969 3300025981 Unclassified 3035
178 Ga0207639_10090557 3300026041 Bacteria 2447
179 Ga0207702_10032009 3300026078 Unclassified 4387
180 Ga0207702_10548605 3300026078 Bacteria 1130
181 Ga0207641_10072301 3300026088 Bacteria 2970
182 Ga0207648_10109324 3300026089 Bacteria 2427
183 Ga0207676_10050866 3300026095 Bacteria 3233
184 Ga0207674_10024219 3300026116 Bacteria 6490
185 Ga0207674_10037723 3300026116 Bacteria 5022
186 Ga0207674_10077292 3300026116 Bacteria 3335
187 Ga0207675_100067136 3300026118 Bacteria 3352
188 Ga0207698_10001158 3300026142 Bacteria 15353
189 Ga0207698_10169442 3300026142 Bacteria 1921
190 Ga0207698_10190791 3300026142 Bacteria 1825
191 Ga0268266_10000010 3300028379 Bacteria 1030233
192 Ga0268265_10038183 3300028380 Bacteria 3531
193 Ga0268265_10315674 3300028380 Unclassified 1413
194 Ga0265334_10057784 3300028573 Bacteria 1469
195 Ga0265323_10002162 3300028653 Bacteria 9165
196 Ga0265323_10005239 3300028653 Bacteria 5515
197 Ga0265322_10043372 3300028654 Bacteria 1280
198 Ga0307515_10000071 3300028794 Bacteria 238152
199 Ga0307515_10000311 3300028794 Bacteria 120044
200 Ga0316177_1144100 3300030731 Bacteria 17706
201 Ga0316176_1022875 3300030732 Bacteria 7688
202 Ga0316183_1025629 3300030742 Bacteria 26285
203 Ga0265330_10003469 3300031235 Bacteria 8230
204 Ga0265327_10000245 3300031251 Bacteria 108670
205 Ga0265316_10011018 3300031344 Bacteria 8200
206 Ga0265316_10031623 3300031344 Bacteria 4325
207 Ga0265316_10098299 3300031344 Bacteria 2227
208 Ga0265316_10147924 3300031344 Bacteria 1761
209 Ga0265316_10187391 3300031344 Bacteria 1538
210 Ga0307513_10025803 3300031456 Bacteria 6795
211 Ga0307513_10133031 3300031456 Bacteria 2428
212 Ga0307509_10104846 3300031507 Bacteria 2851
213 Ga0307408_100000207 3300031548 Bacteria 63271
214 Ga0307408_100000271 3300031548 Bacteria 52116
215 Ga0307408_100017986 3300031548 Bacteria 4741
216 Ga0307508_10002665 3300031616 Bacteria 18710
217 Ga0265342_10040917 3300031712 Bacteria 2808
218 Ga0307405_10036259 3300031731 Bacteria 2953
219 Ga0307412_10029395 3300031911 Bacteria 3449
220 Ga0307416_100119474 3300032002 Bacteria 2345
221 Ga0307414_10135081 3300032004 Unclassified 1922
222 Ga0307414_10291648 3300032004 Bacteria 1375
223 Ga0307510_10056748 3300033180 Unclassified 4072
224 Ga0395899_0000001 3300037312 Bacteria 1750322
225 Ga0395899_0000550 3300037312 Bacteria 40383
226 Ga0395900_0000048 3300037418 Bacteria 227760
227 Ga0395898_0339373 3300037466 Unclassified 1433
228 Ga0400488_56554 3300038741 Bacteria 1030
229 Ga0400483_128412 3300039062 Bacteria 10553
230 Ga0400483_222148 3300039062 Unclassified 1550
231 Ga0439449_0043226 3300042007 Bacteria 1673
232 Ga0466969_0028562 3300044656 Bacteria 2850
233 Ga0466969_0124530 3300044656 Bacteria 1198
234 Ga0466972_0000008 3300044658 Bacteria 264518
235 Ga0466972_0007352 3300044658 Bacteria 5534
236 Ga0453683_0006452 3300044673 Bacteria 8054
237 Ga0466966_0028351 3300044684 Bacteria 3648
238 Ga0466966_0063314 3300044684 Bacteria 2330
239 Ga0466966_0135267 3300044684 Bacteria 1507
240 Ga0466961_0067684 3300044693 Bacteria 2268
241 Ga0466963_0064242 3300044694 Bacteria 2458
242 Ga0453684_0000668 3300044712 Bacteria 122805
243 Ga0453684_0001762 3300044712 Bacteria 57774
244 Ga0453684_0010220 3300044712 Bacteria 16083
245 Ga0466971_0038845 3300044719 Bacteria 2136
246 Ga0466971_0091096 3300044719 Bacteria 1396
247 Ga0466971_0120383 3300044719 Bacteria 1215
248 Ga0466970_0077968 3300044765 Bacteria 1787
249 Ga0466970_0132196 3300044765 Bacteria 1371
250 Ga0466957_0000829 3300044842 Bacteria 15786
251 Ga0466957_0001287 3300044842 Bacteria 13089
252 Ga0466957_0193476 3300044842 Bacteria 1333
253 Ga0466959_0000828 3300045049 Bacteria 18242
254 Ga0466959_0038070 3300045049 Bacteria 3554
255 Ga0466959_0055756 3300045049 Bacteria 2884
256 Ga0451576_0000291 3300045051 Bacteria 122805
257 Ga0466958_0052271 3300045836 Bacteria 2476
258 Ga0495638_0060227 3300046460 Bacteria 2349
259 Ga0495650_0000025 3300046471 Bacteria 486001
260 Ga0495585_0000018 3300046492 Bacteria 162473
261 Ga0495585_0003572 3300046492 Bacteria 10435
262 Ga0495606_0000026 3300046507 Bacteria 259118
263 Ga0495610_0032402 3300046512 Bacteria 2714
264 Ga0495616_0005131 3300046513 Bacteria 8130
265 Ga0495616_0008043 3300046513 Bacteria 6280
266 Ga0495648_0008467 3300046524 Bacteria 8091
267 Ga0495648_0016601 3300046524 Bacteria 5301
268 Ga0495609_0082594 3300046538 Bacteria 1403
269 Ga0495622_0030065 3300046557 Bacteria 2538
270 Ga0495622_0077263 3300046557 Bacteria 1534
271 Ga0495633_0000046 3300046558 Bacteria 167647
272 Ga0495633_0001125 3300046558 Bacteria 21482
273 Ga0495668_0000070 3300046616 Bacteria 174051
274 Ga0495611_0044667 3300046648 Bacteria 1982
275 Ga0495625_0000008 3300046660 Bacteria 536165
276 Ga0495625_0002870 3300046660 Bacteria 18052
277 Ga0495625_0006102 3300046660 Bacteria 10802
278 Ga0495625_0011987 3300046660 Bacteria 7037
279 Ga0495625_0020207 3300046660 Bacteria 5147
280 Ga0495661_0001927 3300046665 Bacteria 16511
281 Ga0495661_0026689 3300046665 Bacteria 3718
282 Ga0495649_0000006 3300046694 Bacteria 542188
283 Ga0495649_0051758 3300046694 Bacteria 2227
284 Ga0495649_0074003 3300046694 Bacteria 1825
285 Ga0495589_0027547 3300046794 Bacteria 2873
286 Ga0495672_0006604 3300047320 Bacteria 8930
287 Ga0495687_002101 3300047443 Bacteria 16699
288 Ga0495673_0050143 3300047469 Bacteria 1834
289 Ga0495686_0000097 3300047472 Bacteria 183450
290 Ga0495686_0029831 3300047472 Bacteria 3545
291 Ga0495686_0030053 3300047472 Bacteria 3531
292 Ga0495686_0064661 3300047472 Bacteria 2264
293 Ga0495678_007639 3300049459 Bacteria 5579
294 Ga0501032_0118210 3300049569 Bacteria 1753
295 Ga0501034_0000105 3300049571 Bacteria 154973
296 Ga0501034_0325133 3300049571 Bacteria 1470
297 Ga0501037_0236718 3300049573 Bacteria 1281
298 Ga0501042_0107276 3300049578 Bacteria 2011
299 Ga0501043_0000247 3300049579 Bacteria 48981
300 Ga0501046_0000007 3300049580 Bacteria 356002
301 Ga0501047_0014242 3300049581 Bacteria 7560
302 Ga0501047_0032692 3300049581 Bacteria 5023
303 Ga0501047_0306283 3300049581 Bacteria 1430
304 Ga0501048_0014018 3300049582 Bacteria 5943
305 Ga0501198_007399 3300049649 Bacteria 1580
306 Ga0501201_002572 3300049651 Bacteria 1664
307 Ga0501223_000339 3300049663 Bacteria 11589
308 Ga0501243_002452 3300049675 Bacteria 2720
309 Ga0501249_022799 3300049679 Bacteria 1372
310 Ga0501083_0000048 3300049744 Bacteria 87560
311 Ga0501035_0014950 3300049822 Bacteria 7161
312 Ga0501035_0178264 3300049822 Bacteria 1832
313 Ga0501044_0031749 3300049823 Bacteria 5556
314 Ga0501044_0129011 3300049823 Bacteria 2524
315 Ga0501044_0136395 3300049823 Bacteria 2445
316 Ga0501044_0343069 3300049823 Bacteria 1414
317 Ga0501045_0130709 3300049824 Bacteria 1866
318 nmdc:mga0k408_127_c1 3300050493 Bacteria 37804
319 nmdc:mga0k408_1369_c1 3300050493 Bacteria 13150
320 nmdc:mga0k408_16865_c1 3300050493 Bacteria 4060
321 nmdc:mga0k408_206358_c1 3300050493 Bacteria 1173
322 nmdc:mga05p37_1784_c1 3300050507 Bacteria 25122
323 nmdc:mga09592_245256_c1 3300050508 Unclassified 1553
324 nmdc:mga09592_74304_c1 3300050508 Bacteria 2889
325 nmdc:mga0qj67_112389_c1 3300050509 Unclassified 2199
326 nmdc:mga06r32_145798_c1 3300050510 Unclassified 2345
327 nmdc:mga08y16_349354_c1 3300050511 Bacteria 1519
328 Ga0500578_0002154 3300053086 Bacteria 17306
329 Ga0500644_0013341 3300053088 Unclassified 2294
330 Ga0500583_0000081 3300053092 Bacteria 55682
331 Ga0500562_000004 3300053108 Bacteria 270087
332 Ga0500568_0001288 3300053139 Bacteria 16488
333 Ga0500568_0012885 3300053139 Bacteria 3830
334 Ga0500622_0001664 3300053156 Bacteria 17370
335 Ga0500622_0002979 3300053156 Bacteria 11738
336 Ga0500622_0005067 3300053156 Bacteria 8020
337 Ga0500611_000005 3300053727 Bacteria 228837
338 Ga0501084_0042085 3300054114 Bacteria 3821
339 Ga0466962_0055425 3300061719 Bacteria 1894

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044693 Ga0466961_0067684 Ga0466961_0067684_891_1874 295
2 3300044719 Ga0466971_0091096 Ga0466971_0091096_382_1365 295
3 3300044842 Ga0466957_0193476 Ga0466957_0193476_104_1087 295
4 3300061719 Ga0466962_0055425 Ga0466962_0055425_330_1313 295
5 3300044694 Ga0466963_0064242 Ga0466963_0064242_880_1863 297
6 3300044765 Ga0466970_0077968 Ga0466970_0077968_52_1035 297
7 3300045049 Ga0466959_0055756 Ga0466959_0055756_1767_2750 297
8 3300044684 Ga0466966_0028351 Ga0466966_0028351_2243_3238 299
9 3300044719 Ga0466971_0038845 Ga0466971_0038845_171_1166 299
10 3300044765 Ga0466970_0132196 Ga0466970_0132196_26_1021 299
11 3300009553 Ga0105249_10423768 Ga0105249_104237682 300
12 3300049569 Ga0501032_0118210 Ga0501032_0118210_140_1093 308
13 3300049571 Ga0501034_0325133 Ga0501034_0325133_366_1319 308
14 3300049581 Ga0501047_0306283 Ga0501047_0306283_434_1387 308
15 3300049823 Ga0501044_0343069 Ga0501044_0343069_175_1128 308
16 3300046524 Ga0495648_0016601 Ga0495648_0016601_4336_5289 315
17 3300049822 Ga0501035_0178264 Ga0501035_0178264_497_1486 317
18 3300005618 Ga0068864_100028595 Ga0068864_1000285953 319
19 3300005843 Ga0068860_100112465 Ga0068860_1001124653 319
20 3300005844 Ga0068862_100029076 Ga0068862_1000290763 319
21 3300009553 Ga0105249_10004156 Ga0105249_1000415611 319
22 3300026088 Ga0207641_10072301 Ga0207641_100723013 319
23 3300026095 Ga0207676_10050866 Ga0207676_100508663 319
24 3300028380 Ga0268265_10038183 Ga0268265_100381833 319
25 iso_pu_bacteria 2816332139 2816511241 325
26 3300025250 Ga0209026_1002344 Ga0209026_10023443 330
27 3300038741 Ga0400488_56554 Ga0400488_56554_27_1019 330
28 3300049573 Ga0501037_0236718 Ga0501037_0236718_195_1235 330
29 3300028573 Ga0265334_10057784 Ga0265334_100577842 332
30 3300032002 Ga0307416_100119474 Ga0307416_1001194742 332
31 3300005327 Ga0070658_10032064 Ga0070658_100320642 333
32 3300005548 Ga0070665_100000066 Ga0070665_100000066157 333
33 3300005563 Ga0068855_100005854 Ga0068855_1000058547 333
34 3300005577 Ga0068857_100012390 Ga0068857_1000123904 333
35 3300005614 Ga0068856_100042286 Ga0068856_1000422863 333
36 3300005616 Ga0068852_100000466 Ga0068852_1000004667 333
37 3300025904 Ga0207647_10013498 Ga0207647_100134983 333
38 3300025909 Ga0207705_10144960 Ga0207705_101449602 333
39 3300025913 Ga0207695_10009478 Ga0207695_100094782 333
40 3300025914 Ga0207671_10002458 Ga0207671_1000245810 333
41 3300025924 Ga0207694_10036913 Ga0207694_100369133 333
42 3300025949 Ga0207667_10000230 Ga0207667_1000023044 333
43 3300025981 Ga0207640_10037969 Ga0207640_100379692 333
44 3300026078 Ga0207702_10032009 Ga0207702_100320093 333
45 3300026116 Ga0207674_10037723 Ga0207674_100377232 333
46 3300026142 Ga0207698_10001158 Ga0207698_100011587 333
47 3300028379 Ga0268266_10000010 Ga0268266_1000001078 333
48 3300050508 nmdc:mga09592_74304_c1 nmdc:mga09592_74304_c1_1126_2127 333
49 3300009093 Ga0105240_10000140 Ga0105240_1000014084 334
50 3300009545 Ga0105237_10058421 Ga0105237_100584212 334
51 3300010375 Ga0105239_10000890 Ga0105239_1000089021 334
52 3300025913 Ga0207695_10000560 Ga0207695_1000056020 334
53 3300025914 Ga0207671_10044751 Ga0207671_100447512 334
54 3300028653 Ga0265323_10002162 Ga0265323_100021626 334
55 3300028653 Ga0265323_10005239 Ga0265323_100052392 334
56 3300028654 Ga0265322_10043372 Ga0265322_100433721 334
57 3300031235 Ga0265330_10003469 Ga0265330_100034692 334
58 3300031344 Ga0265316_10011018 Ga0265316_100110184 334
59 3300031344 Ga0265316_10031623 Ga0265316_100316232 334
60 3300031344 Ga0265316_10098299 Ga0265316_100982992 334
61 3300031344 Ga0265316_10147924 Ga0265316_101479242 334
62 3300031344 Ga0265316_10187391 Ga0265316_101873911 334
63 3300031712 Ga0265342_10040917 Ga0265342_100409171 334
64 3300047320 Ga0495672_0006604 Ga0495672_0006604_7643_8686 334
65 3300050510 nmdc:mga06r32_145798_c1 nmdc:mga06r32_145798_c1_573_1577 334
66 3300003320 rootH2_10037192 rootH2_1003719216 335
67 3300005535 Ga0070684_100003317 Ga0070684_1000033173 335
68 3300005616 Ga0068852_100154705 Ga0068852_1001547052 335
69 3300006195 Ga0075366_10000226 Ga0075366_100002267 335
70 3300009093 Ga0105240_10000384 Ga0105240_1000038423 335
71 3300009093 Ga0105240_10005104 Ga0105240_100051042 335
72 3300013104 Ga0157370_10030576 Ga0157370_100305762 335
73 3300013105 Ga0157369_10485802 Ga0157369_104858022 335
74 3300013296 Ga0157374_10000004 Ga0157374_10000004394 335
75 3300013297 Ga0157378_10077653 Ga0157378_100776533 335
76 3300025246 Ga0209646_1002377 Ga0209646_10023773 335
77 3300025913 Ga0207695_10000027 Ga0207695_10000027256 335
78 3300025913 Ga0207695_10000076 Ga0207695_10000076218 335
79 3300025913 Ga0207695_10000090 Ga0207695_10000090216 335
80 3300025949 Ga0207667_10002222 Ga0207667_100022223 335
81 3300026142 Ga0207698_10190791 Ga0207698_101907912 335
82 3300031548 Ga0307408_100000207 Ga0307408_10000020741 335
83 3300031548 Ga0307408_100000271 Ga0307408_10000027130 335
84 3300037466 Ga0395898_0339373 Ga0395898_0339373_183_1193 335
85 3300046694 Ga0495649_0051758 Ga0495649_0051758_449_1483 335
86 3300049581 Ga0501047_0032692 Ga0501047_0032692_2160_3179 335
87 3300049582 Ga0501048_0014018 Ga0501048_0014018_4880_5911 335
88 3300049679 Ga0501249_022799 Ga0501249_022799_16_1026 335
89 3300049823 Ga0501044_0031749 Ga0501044_0031749_168_1187 335
90 3300050493 nmdc:mga0k408_206358_c1 nmdc:mga0k408_206358_c1_32_1054 335
91 3300049571 Ga0501034_0000105 Ga0501034_0000105_95105_96145 337
92 iso_pu_bacteria 2896317667 2896319151 337
93 iso_pu_bacteria 3003233435 3003237338 337
94 iso_pu_bacteria 2842903701 2842907536 339
95 iso_pu_bacteria 2919437846 2919442134 339
96 3300039062 Ga0400483_128412 Ga0400483_128412_355_1389 340
97 3300039062 Ga0400483_222148 Ga0400483_222148_132_1166 340
98 3300044712 Ga0453684_0001762 Ga0453684_0001762_32934_33968 340
99 iso_pu_bacteria 2738541278 2738729890 340
100 3300005577 Ga0068857_100024856 Ga0068857_1000248562 341
101 3300009553 Ga0105249_10026588 Ga0105249_100265883 341
102 3300025925 Ga0207650_10162997 Ga0207650_101629971 341
103 3300025961 Ga0207712_10019124 Ga0207712_100191243 341
104 3300026116 Ga0207674_10077292 Ga0207674_100772922 341
105 3300031251 Ga0265327_10000245 Ga0265327_1000024538 341
106 3300032004 Ga0307414_10135081 Ga0307414_101350812 341
107 3300049649 Ga0501198_007399 Ga0501198_007399_23_1051 341
108 3300049651 Ga0501201_002572 Ga0501201_002572_192_1220 341
109 iso_pu_bacteria 2977232053 2977236801 341
110 3300005331 Ga0070670_100117171 Ga0070670_1001171712 342
111 3300005471 Ga0070698_100000492 Ga0070698_10000049225 342
112 3300044712 Ga0453684_0010220 Ga0453684_0010220_14971_16008 342
113 iso_pu_bacteria 2599185184 2599480213 342
114 iso_pu_bacteria 2928078545 2928083510 342
115 iso_pu_bacteria 2928147474 2928151226 342
116 iso_pu_bacteria 2929154850 2929154934 342
117 iso_pu_bacteria 2929921140 2929922766 342
118 iso_pu_bacteria 2932082852 2932084525 342
119 iso_pu_bacteria 8003151029 8003154565 342
120 3300005290 Ga0065712_10068823 Ga0065712_100688235 343
121 3300005340 Ga0070689_100190683 Ga0070689_1001906832 343
122 3300005466 Ga0070685_10001966 Ga0070685_100019665 343
123 3300005471 Ga0070698_100003362 Ga0070698_1000033625 343
124 3300005539 Ga0068853_100125879 Ga0068853_1001258792 343
125 3300005544 Ga0070686_100070405 Ga0070686_1000704052 343
126 3300005719 Ga0068861_100024853 Ga0068861_1000248533 343
127 3300005841 Ga0068863_100202887 Ga0068863_1002028872 343
128 3300006844 Ga0075428_100044894 Ga0075428_1000448942 343
129 3300006846 Ga0075430_100066682 Ga0075430_1000666823 343
130 3300009093 Ga0105240_10007975 Ga0105240_100079758 343
131 3300009094 Ga0111539_10286990 Ga0111539_102869902 343
132 3300009174 Ga0105241_10072159 Ga0105241_100721593 343
133 3300009176 Ga0105242_10022352 Ga0105242_100223523 343
134 3300009177 Ga0105248_10232061 Ga0105248_102320612 343
135 3300009545 Ga0105237_10000142 Ga0105237_1000014244 343
136 3300009545 Ga0105237_10117119 Ga0105237_101171192 343
137 3300009551 Ga0105238_10001734 Ga0105238_100017347 343
138 3300009553 Ga0105249_10001212 Ga0105249_100012124 343
139 3300013104 Ga0157370_10020209 Ga0157370_100202092 343
140 3300013105 Ga0157369_10027778 Ga0157369_100277783 343
141 3300013306 Ga0163162_10003890 Ga0163162_100038909 343
142 3300013308 Ga0157375_10014547 Ga0157375_100145477 343
143 3300014326 Ga0157380_10003918 Ga0157380_100039184 343
144 3300014969 Ga0157376_10116099 Ga0157376_101160993 343
145 3300017792 Ga0163161_10001010 Ga0163161_100010105 343
146 3300025934 Ga0207686_10150958 Ga0207686_101509581 343
147 3300025961 Ga0207712_10000825 Ga0207712_1000082510 343
148 3300026118 Ga0207675_100067136 Ga0207675_1000671362 343
149 3300030731 Ga0316177_1144100 Ga0316177_114410013 343
150 3300030732 Ga0316176_1022875 Ga0316176_10228754 343
151 3300030742 Ga0316183_1025629 Ga0316183_10256291 343
152 3300031731 Ga0307405_10036259 Ga0307405_100362593 343
153 3300031911 Ga0307412_10029395 Ga0307412_100293952 343
154 3300044673 Ga0453683_0006452 Ga0453683_0006452_4005_5039 343
155 3300046460 Ga0495638_0060227 Ga0495638_0060227_436_1482 343
156 3300046524 Ga0495648_0008467 Ga0495648_0008467_1128_2174 343
157 3300046648 Ga0495611_0044667 Ga0495611_0044667_293_1339 343
158 3300049663 Ga0501223_000339 Ga0501223_000339_389_1420 343
159 3300049675 Ga0501243_002452 Ga0501243_002452_1132_2169 343
160 3300050509 nmdc:mga0qj67_112389_c1 nmdc:mga0qj67_112389_c1_411_1469 343
161 3300050511 nmdc:mga08y16_349354_c1 nmdc:mga08y16_349354_c1_38_1069 343
162 3300053156 Ga0500622_0005067 Ga0500622_0005067_4864_5910 343
163 3300053727 Ga0500611_000005 Ga0500611_000005_213947_214978 343
164 3300003322 rootL2_10215357 rootL2_102153573 344
165 3300003323 rootH1_10008837 rootH1_100088373 344
166 3300005290 Ga0065712_10103803 Ga0065712_101038032 344
167 3300005295 Ga0065707_10093012 Ga0065707_100930122 344
168 3300005471 Ga0070698_100164514 Ga0070698_1001645142 344
169 3300005577 Ga0068857_100038781 Ga0068857_1000387812 344
170 3300005616 Ga0068852_100259600 Ga0068852_1002596002 344
171 3300005844 Ga0068862_100254383 Ga0068862_1002543832 344
172 3300005844 Ga0068862_100317144 Ga0068862_1003171442 344
173 3300006844 Ga0075428_100016849 Ga0075428_1000168494 344
174 3300006847 Ga0075431_100019293 Ga0075431_1000192932 344
175 3300009093 Ga0105240_10051266 Ga0105240_100512663 344
176 3300009147 Ga0114129_10000792 Ga0114129_1000079220 344
177 3300009147 Ga0114129_10070774 Ga0114129_100707742 344
178 3300009147 Ga0114129_10305427 Ga0114129_103054272 344
179 3300009174 Ga0105241_10025515 Ga0105241_100255153 344
180 3300009545 Ga0105237_10025169 Ga0105237_100251693 344
181 3300009545 Ga0105237_10108444 Ga0105237_101084442 344
182 3300013307 Ga0157372_10015819 Ga0157372_100158191 344
183 3300013307 Ga0157372_10216907 Ga0157372_102169072 344
184 3300025911 Ga0207654_10030589 Ga0207654_100305892 344
185 3300025913 Ga0207695_10086949 Ga0207695_100869491 344
186 3300025914 Ga0207671_10007540 Ga0207671_100075405 344
187 3300025914 Ga0207671_10141541 Ga0207671_101415412 344
188 3300025949 Ga0207667_10424879 Ga0207667_104248792 344
189 3300026078 Ga0207702_10548605 Ga0207702_105486051 344
190 3300026116 Ga0207674_10024219 Ga0207674_100242194 344
191 3300026142 Ga0207698_10169442 Ga0207698_101694422 344
192 3300028380 Ga0268265_10315674 Ga0268265_103156742 344
193 3300031456 Ga0307513_10133031 Ga0307513_101330311 344
194 3300031507 Ga0307509_10104846 Ga0307509_101048462 344
195 3300033180 Ga0307510_10056748 Ga0307510_100567483 344
196 3300044656 Ga0466969_0028562 Ga0466969_0028562_158_1204 344
197 3300044656 Ga0466969_0124530 Ga0466969_0124530_103_1140 344
198 3300044658 Ga0466972_0000008 Ga0466972_0000008_146682_147728 344
199 3300044658 Ga0466972_0007352 Ga0466972_0007352_2130_3176 344
200 3300044684 Ga0466966_0135267 Ga0466966_0135267_403_1449 344
201 3300044719 Ga0466971_0120383 Ga0466971_0120383_19_1056 344
202 3300044842 Ga0466957_0000829 Ga0466957_0000829_10476_11522 344
203 3300044842 Ga0466957_0001287 Ga0466957_0001287_9176_10222 344
204 3300045049 Ga0466959_0000828 Ga0466959_0000828_3657_4703 344
205 3300045049 Ga0466959_0038070 Ga0466959_0038070_768_1805 344
206 3300050507 nmdc:mga05p37_1784_c1 nmdc:mga05p37_1784_c1_16708_17748 344
207 3300053086 Ga0500578_0002154 Ga0500578_0002154_10180_11226 344
208 3300053092 Ga0500583_0000081 Ga0500583_0000081_2230_3276 344
209 3300053139 Ga0500568_0001288 Ga0500568_0001288_14909_15943 344
210 3300001979 JGI24740J21852_10016214 JGI24740J21852_100162141 345
211 3300002741 JGI25157J39369_1003644 JGI25157J39369_10036442 345
212 3300003320 rootH2_10001334 rootH2_1000133426 345
213 3300003320 rootH2_10075092 rootH2_100750924 345
214 3300003323 rootH1_10204566 rootH1_102045662 345
215 3300005295 Ga0065707_10010277 Ga0065707_100102772 345
216 3300005329 Ga0070683_100035830 Ga0070683_1000358303 345
217 3300005355 Ga0070671_100037377 Ga0070671_1000373771 345
218 3300005356 Ga0070674_100047146 Ga0070674_1000471462 345
219 3300005366 Ga0070659_100000283 Ga0070659_1000002839 345
220 3300005438 Ga0070701_10162267 Ga0070701_101622672 345
221 3300005459 Ga0068867_100045838 Ga0068867_1000458383 345
222 3300005471 Ga0070698_100008107 Ga0070698_1000081076 345
223 3300005518 Ga0070699_100149218 Ga0070699_1001492182 345
224 3300005578 Ga0068854_100230295 Ga0068854_1002302952 345
225 3300005615 Ga0070702_100216516 Ga0070702_1002165161 345
226 3300005617 Ga0068859_100009731 Ga0068859_1000097316 345
227 3300006844 Ga0075428_100105157 Ga0075428_1001051572 345
228 3300006931 Ga0097620_100009731 Ga0097620_1000097316 345
229 3300009093 Ga0105240_10000010 Ga0105240_10000010158 345
230 3300009093 Ga0105240_10014431 Ga0105240_100144312 345
231 3300009545 Ga0105237_10000243 Ga0105237_1000024373 345
232 3300009551 Ga0105238_10009953 Ga0105238_100099533 345
233 3300009551 Ga0105238_10328340 Ga0105238_103283402 345
234 3300010375 Ga0105239_10005224 Ga0105239_100052245 345
235 3300013102 Ga0157371_10020427 Ga0157371_100204273 345
236 3300013105 Ga0157369_10000039 Ga0157369_1000003999 345
237 3300013306 Ga0163162_10276102 Ga0163162_102761021 345
238 3300013307 Ga0157372_10000001 Ga0157372_10000001265 345
239 3300013307 Ga0157372_10107298 Ga0157372_101072982 345
240 3300025250 Ga0209026_1000423 Ga0209026_10004235 345
241 3300025250 Ga0209026_1001164 Ga0209026_10011648 345
242 3300025913 Ga0207695_10000019 Ga0207695_10000019294 345
243 3300025913 Ga0207695_10073113 Ga0207695_100731133 345
244 3300025914 Ga0207671_10003139 Ga0207671_1000313915 345
245 3300025919 Ga0207657_10014290 Ga0207657_100142906 345
246 3300025924 Ga0207694_10125477 Ga0207694_101254772 345
247 3300025931 Ga0207644_10094246 Ga0207644_100942462 345
248 3300025932 Ga0207690_10001800 Ga0207690_100018003 345
249 3300026041 Ga0207639_10090557 Ga0207639_100905573 345
250 3300026089 Ga0207648_10109324 Ga0207648_101093242 345
251 3300028794 Ga0307515_10000071 Ga0307515_1000007166 345
252 3300031456 Ga0307513_10025803 Ga0307513_100258035 345
253 3300031548 Ga0307408_100017986 Ga0307408_1000179865 345
254 3300031616 Ga0307508_10002665 Ga0307508_1000266510 345
255 3300032004 Ga0307414_10291648 Ga0307414_102916481 345
256 3300037312 Ga0395899_0000550 Ga0395899_0000550_34472_35512 345
257 3300037418 Ga0395900_0000048 Ga0395900_0000048_107354_108397 345
258 3300042007 Ga0439449_0043226 Ga0439449_0043226_82_1134 345
259 3300044684 Ga0466966_0063314 Ga0466966_0063314_979_2019 345
260 3300044712 Ga0453684_0000668 Ga0453684_0000668_72055_73110 345
261 3300045051 Ga0451576_0000291 Ga0451576_0000291_49711_50766 345
262 3300045836 Ga0466958_0052271 Ga0466958_0052271_324_1364 345
263 3300046660 Ga0495625_0006102 Ga0495625_0006102_7813_8856 345
264 3300046694 Ga0495649_0074003 Ga0495649_0074003_759_1799 345
265 3300047472 Ga0495686_0029831 Ga0495686_0029831_1078_2127 345
266 3300049578 Ga0501042_0107276 Ga0501042_0107276_538_1605 345
267 3300049579 Ga0501043_0000247 Ga0501043_0000247_42838_43905 345
268 3300049580 Ga0501046_0000007 Ga0501046_0000007_316063_317130 345
269 3300049581 Ga0501047_0014242 Ga0501047_0014242_4794_5861 345
270 3300049744 Ga0501083_0000048 Ga0501083_0000048_50655_51722 345
271 3300049822 Ga0501035_0014950 Ga0501035_0014950_791_1858 345
272 3300049823 Ga0501044_0129011 Ga0501044_0129011_975_2018 345
273 3300049823 Ga0501044_0136395 Ga0501044_0136395_782_1849 345
274 3300049824 Ga0501045_0130709 Ga0501045_0130709_531_1598 345
275 3300050493 nmdc:mga0k408_127_c1 nmdc:mga0k408_127_c1_16401_17444 345
276 3300050508 nmdc:mga09592_245256_c1 nmdc:mga09592_245256_c1_372_1538 345
277 3300054114 Ga0501084_0042085 Ga0501084_0042085_2520_3587 345
278 3300001979 JGI24740J21852_10001080 JGI24740J21852_100010802 346
279 3300001989 JGI24739J22299_10010561 JGI24739J22299_100105613 346
280 3300001990 JGI24737J22298_10000413 JGI24737J22298_100004135 346
281 3300002067 JGI24735J21928_10000029 JGI24735J21928_1000002919 346
282 3300003215 JGI25153J46596_10001088 JGI25153J46596_100010883 346
283 3300003316 rootH1_10023928 rootH1_100239289 346
284 3300003323 rootH1_10147528 rootH1_101475281 346
285 3300003323 rootH1_10230304 rootH1_102303044 346
286 3300003354 JGI25160J50197_1000466 JGI25160J50197_10004665 346
287 3300003771 Ga0055526_1002628 Ga0055526_10026285 346
288 3300003790 Ga0055528_1001498 Ga0055528_10014985 346
289 3300003791 Ga0055530_10000556 Ga0055530_1000055628 346
290 3300004625 Ga0055543_1018340 Ga0055543_10183402 346
291 3300005262 Ga0065165_1000743 Ga0065165_100074329 346
292 3300005563 Ga0068855_100189044 Ga0068855_1001890442 346
293 3300005563 Ga0068855_100224887 Ga0068855_1002248872 346
294 3300006195 Ga0075366_10001822 Ga0075366_100018225 346
295 3300006195 Ga0075366_10007993 Ga0075366_100079933 346
296 3300009545 Ga0105237_10000177 Ga0105237_100001776 346
297 3300010375 Ga0105239_10107056 Ga0105239_101070563 346
298 3300010375 Ga0105239_10512758 Ga0105239_105127582 346
299 3300013100 Ga0157373_10001072 Ga0157373_100010728 346
300 3300013102 Ga0157371_10121840 Ga0157371_101218402 346
301 3300013102 Ga0157371_10276610 Ga0157371_102766101 346
302 3300013104 Ga0157370_10398403 Ga0157370_103984031 346
303 3300013105 Ga0157369_10107532 Ga0157369_101075322 346
304 3300013105 Ga0157369_10409350 Ga0157369_104093502 346
305 3300013306 Ga0163162_10003325 Ga0163162_100033252 346
306 3300013307 Ga0157372_10002023 Ga0157372_1000202311 346
307 3300014326 Ga0157380_10059646 Ga0157380_100596462 346
308 3300025273 Ga0209673_1000438 Ga0209673_100043834 346
309 3300025295 Ga0209564_1000606 Ga0209564_10006066 346
310 3300025297 Ga0209758_1000409 Ga0209758_100040957 346
311 3300025298 Ga0209050_1000438 Ga0209050_10004385 346
312 3300025302 Ga0207426_1000444 Ga0207426_100044444 346
313 3300025302 Ga0207426_1001316 Ga0207426_10013163 346
314 3300025304 Ga0209257_1001172 Ga0209257_100117229 346
315 3300025914 Ga0207671_10003493 Ga0207671_100034937 346
316 3300025949 Ga0207667_10158588 Ga0207667_101585882 346
317 3300025949 Ga0207667_10470734 Ga0207667_104707342 346
318 3300028794 Ga0307515_10000311 Ga0307515_1000031133 346
319 3300037312 Ga0395899_0000001 Ga0395899_0000001_1328314_1329363 346
320 3300046471 Ga0495650_0000025 Ga0495650_0000025_171543_172583 346
321 3300046492 Ga0495585_0000018 Ga0495585_0000018_113348_114388 346
322 3300046492 Ga0495585_0003572 Ga0495585_0003572_6396_7442 346
323 3300046507 Ga0495606_0000026 Ga0495606_0000026_181562_182602 346
324 3300046512 Ga0495610_0032402 Ga0495610_0032402_952_1992 346
325 3300046513 Ga0495616_0005131 Ga0495616_0005131_6593_7633 346
326 3300046513 Ga0495616_0008043 Ga0495616_0008043_3655_4701 346
327 3300046538 Ga0495609_0082594 Ga0495609_0082594_341_1387 346
328 3300046557 Ga0495622_0030065 Ga0495622_0030065_590_1636 346
329 3300046557 Ga0495622_0077263 Ga0495622_0077263_173_1213 346
330 3300046558 Ga0495633_0000046 Ga0495633_0000046_67494_68540 346
331 3300046558 Ga0495633_0001125 Ga0495633_0001125_13896_14936 346
332 3300046616 Ga0495668_0000070 Ga0495668_0000070_165175_166221 346
333 3300046660 Ga0495625_0000008 Ga0495625_0000008_131291_132331 346
334 3300046660 Ga0495625_0002870 Ga0495625_0002870_15492_16538 346
335 3300046660 Ga0495625_0011987 Ga0495625_0011987_5155_6201 346
336 3300046660 Ga0495625_0020207 Ga0495625_0020207_187_1233 346
337 3300046665 Ga0495661_0001927 Ga0495661_0001927_13882_14922 346
338 3300046665 Ga0495661_0026689 Ga0495661_0026689_2090_3130 346
339 3300046694 Ga0495649_0000006 Ga0495649_0000006_356791_357831 346
340 3300046794 Ga0495589_0027547 Ga0495589_0027547_482_1522 346
341 3300047443 Ga0495687_002101 Ga0495687_002101_2786_3826 346
342 3300047469 Ga0495673_0050143 Ga0495673_0050143_277_1317 346
343 3300047472 Ga0495686_0000097 Ga0495686_0000097_167733_168779 346
344 3300047472 Ga0495686_0030053 Ga0495686_0030053_1974_3014 346
345 3300047472 Ga0495686_0064661 Ga0495686_0064661_856_1905 346
346 3300049459 Ga0495678_007639 Ga0495678_007639_2645_3691 346
347 3300050493 nmdc:mga0k408_1369_c1 nmdc:mga0k408_1369_c1_7210_8259 346
348 3300050493 nmdc:mga0k408_16865_c1 nmdc:mga0k408_16865_c1_2063_3103 346
349 3300053088 Ga0500644_0013341 Ga0500644_0013341_550_1590 346
350 3300053108 Ga0500562_000004 Ga0500562_000004_116876_117916 346
351 3300053139 Ga0500568_0012885 Ga0500568_0012885_904_1944 346
352 3300053156 Ga0500622_0001664 Ga0500622_0001664_5255_6301 346
353 3300053156 Ga0500622_0002979 Ga0500622_0002979_2474_3514 346

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04166

PdxA

Pyridoxal phosphate biosynthetic protein PdxA

35

339

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6xmy-assembly1.cif.gz_A crystal structure of 4-hydroxythreonine-4-phosphate dehydrogenase from legionella pneumophila in complex with nad 0.9216 1 343
1ps6-assembly1.cif.gz_A crystal structure of e.coli pdxa 0.9192 4 344
6xmy-assembly1.cif.gz_A crystal structure of 4-hydroxythreonine-4-phosphate dehydrogenase from legionella pneumophila in complex with nad 0.919 1 343
1ps6-assembly1.cif.gz_A crystal structure of e.coli pdxa 0.9138 4 344
1r8k-assembly1.cif.gz_B pdxa protein; nad-dependent dehydrogenase/carboxylase; subunit of pyridoxine phosphate biosynthetic protein pdxj-pdxa [salmonella typhimurium] 0.9077 6 342
ID Description Score Start End Superfamily
1r8kA00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9006 5 344 3.40.718.10
1r8kA00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8952 5 344 3.40.718.10
2hi1B00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8677 6 339 3.40.718.10
2hi1B00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8601 6 339 3.40.718.10
4jqpB00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8319 3 339 3.40.718.10
ID Description Score Start End GO Terms
AF-A0A0F9HD33-F1-model_v4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.985 5 137 GO:0016491
GO:0046872
GO:0051287
AF-A0A842QNX1-F1-model_v4 4-hydroxythreonine-4-phosphate dehydrogenase 0.9787 4 155 GO:0016491
GO:0046872
GO:0051287
AF-A0A0F9PCD0-F1-model_v4 4-hydroxythreonine-4-phosphate dehydrogenase 0.9775 5 133 GO:0016491
GO:0046872
GO:0051287
AF-A0A7X8Z994-F1-model_v4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.9769 1 132 GO:0016491
GO:0046872
GO:0051287
AF-A0A357AGG2-F1-model_v4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.9737 157 251 GO:0016491
GO:0046872
GO:0051287

Feature Viewer

pLDDT pTM Quality
91.55 0.89 High
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Predicted Structure (AlphaFold2)

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