|
Taxon Oid |
3300038741
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Seagrass microbial communities from Seahorse Key, Florida, USA |
| Genome Name Sample Name |
Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 |
| Sequencing Center |
University of Florida, Gainesville |
| Img Genome Id |
3300038741 |
| Ncbi Phylum |
Host-associated |
| Ncbi Class |
Plants |
| Ncbi Order |
Roots |
| Ncbi Family |
Unclassified |
| Ncbi Genus |
Unclassified |
| Ncbi Species |
Seagrass microbial communities from Seahorse Key, Florida, USA |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.5.0.15 |
| Img Submission Id |
220143 |
|
Gold Analysis Project Id
|
Ga0400488
|
| Gold Analysis Project Type |
Metagenome Analysis |
|
Gold Sequencing Project Id
|
Gp0452470
|
|
Gold Study Id
|
Gs0144363
|
| Add Date |
04/10/2020 00:00:00 |
| Assembly Method |
Megahit v. 1.1.4 |
| Comments |
released by JGI data releasing policy |
| Has Coverage |
False |
| Public Release Date |
03/13/2023 00:00:00 |
| Submission Type |
Primary |
| In File |
Yes |
| Submitter Name |
Julie Meyer |
| Rnd Project |
True |
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
Julie Meyer |
| Contact Email |
[email protected] |
| Contact Name |
Julie Meyer |
| Is Published |
False |
| Sequencing Method |
Illumina NextSeq 500 |
| Sequencing Quality |
Level 1: Standard Draft |
| Sequencing Strategy |
Metagenome |
| Ecosystem |
Host-associated |
| Ecosystem Category |
Plants |
| Ecosystem Subtype |
Unclassified |
| Ecosystem Type |
Roots |
| Specific Ecosystem |
Unclassified |
| Cultured |
False |
| Depth In Meters |
1.000000 |
| Geographic Location |
USA: Northeast of Seahorse Key, FL |
| Habitat |
seagrass root |
| Isolation |
seagrass root |
| Isolation Country |
8855 |
| Latitude |
29.23 |
| Longitude |
-83.735 |
| Sample Collection Date |
2018/8/2 |
| Host Name |
Syringodium filiforme |
| Genome Size Assembled |
140066034 |
| Gene Count Assembled |
173898 |