F419188

General Info

Members Datasets Scaffolds Average Seq Length
352 268 309 368

Family's Representative Sequence

Representative Sequence 3300049586|Ga0501070_0050336|Ga0501070_0050336_313_1614
Length 418
Sequence MTVLQFAPQLSRTSPLARVRGVAPRTSAVVVQMPLRRPAPPSRVRGHRILHWVALNIVLLAALLLHAGSAHAERIMDLADVAGVRDNPLVGYGLVVGLDGSGDQTSQAPFTVQSLESMLSQLGVTVPAGTNPQLKNVAAVAIHATLPAFAKPGQKIDITVSSIGNAGSLRGGALLMTPLKGADGQIYAIAQGNVVVGGLGVSGGDGSKVTINIPSAGLIPNGATVERAVAQNFGSSNEVTLNLHTADFTTASRMVQGIDAALGAGSARALDAVSVAVRAPADPAQRVGFIAQLENLDISPGDAPARVVINARTGTVVIGGQVRVTPAAVSSGALSVTITERPQVSQPEPFSQGQTVVTPKSSISVQQQDAHMFVFAPGTTLDELVRAVNQVGAAPGDIVSILEALKQAGALRAQLVVI

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
3 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
4 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
5 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
6 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
7 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
8 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
9 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
10 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
11 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
12 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
13 2818991440 Luteibacter yeojuensis 583 Isolate Unclassified
14 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
15 2818991457 Xanthomonas translucens 569 Isolate Unclassified
16 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
17 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
18 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
19 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
20 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
21 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
22 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
23 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
24 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
25 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
26 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
27 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
28 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified
29 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
30 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
31 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
32 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
33 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
34 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
35 2919085039 Luteibacter sp. 1214 Isolate Unclassified
36 2919404418 Luteibacter sp. 3190 Isolate Unclassified
37 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
38 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
39 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
40 2953994433 Luteibacter sp. W1I16 Isolate Rhizosphere
41 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
42 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
43 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
44 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
45 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
46 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
47 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
48 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
49 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
50 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
51 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
52 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
53 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
54 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
55 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
56 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
57 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
58 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
59 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
60 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
61 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
62 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
63 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
64 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
65 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
66 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
67 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
68 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
69 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
70 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
71 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
72 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
73 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
74 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
75 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
76 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
77 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
78 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
79 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
80 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
81 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
82 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
83 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
84 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
85 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
86 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
87 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
88 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
89 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
90 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
91 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
92 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
93 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
94 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
95 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
96 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
97 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
102 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
103 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
106 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
107 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
109 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
110 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
111 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
112 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
126 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
127 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
128 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
129 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
130 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
131 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
132 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
133 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
134 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
135 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
136 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
137 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
140 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
141 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
142 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
143 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
144 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
145 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
146 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
147 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
148 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
149 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
150 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
151 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
152 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
153 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
154 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
155 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
156 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
157 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
158 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
159 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
160 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
161 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
162 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
163 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
164 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
165 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
166 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
167 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
168 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
169 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
170 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
171 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
172 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
173 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
174 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
175 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
176 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
177 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
178 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
179 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
180 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
181 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
182 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
183 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
184 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
185 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
186 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
187 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
188 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
189 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
190 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
191 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
192 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
193 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
194 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
195 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
196 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
197 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
198 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
199 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
200 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
201 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
202 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
203 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
204 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
205 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
206 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
207 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
208 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
209 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
210 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
211 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
212 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
213 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
214 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
215 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
216 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
217 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
218 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
219 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
220 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
221 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
222 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
223 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
224 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
225 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
226 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
227 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
228 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
229 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
230 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
231 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
232 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
233 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
234 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
235 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
236 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
237 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
238 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
239 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
240 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
241 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
242 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
243 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
244 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
245 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
246 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
247 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
248 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
249 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
250 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
251 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
252 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
253 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
254 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
255 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
256 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
257 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
258 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
259 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
260 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
261 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
262 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
263 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
264 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
265 8002745576 Marinomonas spartinae USM8 Isolate Rhizosphere
266 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
267 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
268 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.93
Metatranscriptomes 0.85
Isolates 12.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.33
Nodule 0.57
Rhizoplane 2.27
Rhizosphere 63.64
Stem 0
Stem Tuber 0
Unclassified 16.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2072087 2162886007 Bacteria 7988
2 SwRhRL2b_contig_250858 2162886007 Bacteria 2177
3 JGI24739J22299_10030007 3300001989 Bacteria 1887
4 JGI25152J39213_1000112 3300002773 Bacteria 57349
5 JGI25150J39212_1000284 3300002774 Bacteria 26510
6 JGI25151J46595_10000057 3300003187 Bacteria 151052
7 JGI25153J46596_10000041 3300003215 Bacteria 162103
8 rootH2_10028684 3300003320 Bacteria 1797
9 rootH2_10053268 3300003320 Bacteria 1559
10 Ga0006562J51391_1007274 3300003578 Bacteria 11100
11 Ga0055538_1000002 3300003751 Bacteria 999437
12 Ga0055539_1000002 3300003752 Bacteria 999437
13 Ga0055533_1000004 3300003756 Bacteria 999437
14 Ga0055525_1000002 3300003759 Bacteria 999437
15 Ga0055526_1005487 3300003771 Bacteria 7275
16 Ga0055524_1000020 3300003775 Bacteria 227971
17 Ga0055536_1010208 3300003781 Bacteria 3761
18 Ga0055541_1000002 3300003841 Bacteria 896405
19 Ga0065165_1000260 3300005262 Bacteria 90953
20 Ga0065704_10010544 3300005289 Bacteria 2979
21 Ga0065704_10070856 3300005289 Bacteria 15344
22 Ga0070658_10002838 3300005327 Bacteria 14399
23 Ga0070670_100001618 3300005331 Bacteria 18206
24 Ga0070660_100188521 3300005339 Bacteria 1670
25 Ga0070659_100084495 3300005366 Bacteria 2538
26 Ga0070667_100047208 3300005367 Bacteria 3623
27 Ga0070714_100000273 3300005435 Bacteria 39446
28 Ga0070714_100337251 3300005435 Bacteria 1413
29 Ga0070714_100394251 3300005435 Bacteria 1307
30 Ga0070681_10024042 3300005458 Bacteria 6135
31 Ga0070706_100165908 3300005467 Bacteria 2062
32 Ga0070679_100028895 3300005530 Bacteria 5469
33 Ga0068855_100001839 3300005563 Bacteria 26398
34 Ga0068855_100002181 3300005563 Bacteria 24208
35 Ga0068855_100098774 3300005563 Bacteria 3362
36 Ga0068856_100002720 3300005614 Bacteria 18121
37 Ga0068856_100016450 3300005614 Bacteria 7159
38 Ga0075368_10000521 3300006042 Bacteria 11499
39 Ga0075363_100007127 3300006048 Bacteria 5117
40 Ga0075362_10005698 3300006177 Bacteria 4583
41 Ga0075367_10040205 3300006178 Bacteria 2730
42 Ga0075369_10014939 3300006186 Bacteria 3109
43 Ga0075369_10035408 3300006186 Bacteria 2122
44 Ga0075366_10007243 3300006195 Bacteria 6114
45 Ga0075366_10041455 3300006195 Bacteria 2726
46 Ga0075370_10043038 3300006353 Bacteria 2552
47 Ga0105251_10000094 3300009011 Bacteria 85749
48 Ga0105240_10033553 3300009093 Bacteria 6629
49 Ga0111539_10142849 3300009094 Bacteria 2802
50 Ga0105238_10001377 3300009551 Bacteria 24362
51 Ga0105238_10027286 3300009551 Bacteria 5817
52 Ga0123341_1038330 3300009765 Bacteria 3223
53 Ga0105239_10032972 3300010375 Bacteria 5690
54 Ga0105246_10167049 3300011119 Bacteria 1681
55 Ga0157373_10062129 3300013100 Bacteria 2645
56 Ga0157370_10000891 3300013104 Bacteria 37928
57 Ga0157370_10021564 3300013104 Bacteria 6418
58 Ga0157369_10005934 3300013105 Bacteria 14187
59 Ga0157372_10040343 3300013307 Bacteria 5156
60 Ga0157375_10066643 3300013308 Bacteria 3596
61 Ga0157380_10132968 3300014326 Bacteria 2125
62 Ga0157376_10198214 3300014969 Bacteria 1845
63 Ga0182006_1016294 3300015261 Bacteria 3171
64 Ga0182007_10009882 3300015262 Bacteria 3804
65 Ga0182005_1000138 3300015265 Bacteria 51894
66 Ga0182005_1001505 3300015265 Bacteria 9287
67 Ga0163161_10008123 3300017792 Bacteria 7257
68 Ga0213873_10012908 3300021358 Bacteria 1821
69 Ga0213872_10000401 3300021361 Bacteria 36021
70 Ga0213872_10001891 3300021361 Bacteria 12895
71 Ga0213874_10008065 3300021377 Bacteria 2553
72 Ga0209784_100002 3300025224 Bacteria 1753105
73 Ga0209566_100003 3300025225 Bacteria 1753105
74 Ga0209674_100004 3300025226 Bacteria 1753105
75 Ga0209563_100006 3300025230 Bacteria 1753105
76 Ga0209437_101074 3300025233 Bacteria 8851
77 Ga0207425_1000044 3300025245 Bacteria 195202
78 Ga0209677_100003 3300025253 Bacteria 1753105
79 Ga0209148_1007161 3300025254 Bacteria 2340
80 Ga0209129_1000044 3300025258 Bacteria 298971
81 Ga0209129_1002112 3300025258 Bacteria 10124
82 Ga0209675_1001268 3300025291 Bacteria 15105
83 Ga0209676_1000024 3300025292 Bacteria 578839
84 Ga0209676_1004328 3300025292 Bacteria 7972
85 Ga0209025_1000012 3300025294 Bacteria 924362
86 Ga0209025_1016641 3300025294 Bacteria 4315
87 Ga0209564_1000049 3300025295 Bacteria 362075
88 Ga0209758_1000018 3300025297 Bacteria 753320
89 Ga0209256_1000014 3300025299 Bacteria 687409
90 Ga0209256_1012926 3300025299 Bacteria 3141
91 Ga0207713_1000257 3300025735 Bacteria 65404
92 Ga0207647_10002005 3300025904 Bacteria 15570
93 Ga0207643_10031887 3300025908 Bacteria 2940
94 Ga0207705_10001667 3300025909 Bacteria 17665
95 Ga0207695_10018668 3300025913 Bacteria 8011
96 Ga0207671_10037030 3300025914 Bacteria 3618
97 Ga0207694_10003192 3300025924 Bacteria 13079
98 Ga0207694_10049854 3300025924 Bacteria 3241
99 Ga0207650_10002399 3300025925 Bacteria 13049
100 Ga0207664_10034070 3300025929 Bacteria 3919
101 Ga0207690_10061561 3300025932 Bacteria 2552
102 Ga0207704_10052055 3300025938 Bacteria 2480
103 Ga0207667_10000025 3300025949 Bacteria 350159
104 Ga0207667_10000067 3300025949 Bacteria 184547
105 Ga0207667_10003893 3300025949 Bacteria 18363
106 Ga0207667_10010021 3300025949 Bacteria 11114
107 Ga0207702_10003108 3300026078 Bacteria 15388
108 Ga0209371_1000072 3300027312 Bacteria 199942
109 Ga0207428_10093775 3300027907 Bacteria 2328
110 Ga0265334_10000068 3300028573 Bacteria 76150
111 Ga0268256_1000065 3300030500 Bacteria 199943
112 Ga0307511_10001752 3300030521 Bacteria 22835
113 Ga0265327_10075780 3300031251 Bacteria 1673
114 Ga0307509_10068087 3300031507 Bacteria 3726
115 Ga0307408_100002931 3300031548 Bacteria 11822
116 Ga0307508_10006732 3300031616 Bacteria 10777
117 Ga0307412_10005675 3300031911 Bacteria 7013
118 Ga0307414_10008988 3300032004 Bacteria 5710
119 Ga0307414_10268020 3300032004 Bacteria 1428
120 Ga0316583_10028067 3300032133 Bacteria 2008
121 Ga0316593_10000481 3300032168 Bacteria 7374
122 Ga0316592_1022138 3300033524 Unclassified 1357
123 Ga0373952_0000466 3300035092 Bacteria 7047
124 Ga0316582_0154609 3300036647 Bacteria 1552
125 Ga0316584_0009830 3300036712 Bacteria 6660
126 Ga0316584_0110429 3300036712 Bacteria 2058
127 Ga0395899_0034884 3300037312 Bacteria 3777
128 Ga0395900_0005892 3300037418 Bacteria 12799
129 Ga0395900_0379490 3300037418 Bacteria 1382
130 Ga0395898_0036526 3300037466 Bacteria 4878
131 Ga0395898_0040654 3300037466 Bacteria 4596
132 Ga0395898_0104603 3300037466 Bacteria 2715
133 Ga0395905_0123784 3300037471 Bacteria 2431
134 Ga0395905_0158950 3300037471 Bacteria 2125
135 Ga0436364_0519232 3300037853 Bacteria 78366
136 Ga0436364_1215387 3300037853 Bacteria 105146
137 Ga0395901_0015669 3300038443 Bacteria 7721
138 Ga0395901_0030822 3300038443 Bacteria 5526
139 Ga0237819_00005 3300038705 Bacteria 79509
140 Ga0436360_1190745 3300039438 Bacteria 1191
141 Ga0436361_0112290 3300039447 Bacteria 9721
142 Ga0436361_0254093 3300039447 Bacteria 2896
143 Ga0436363_0023489 3300039450 Bacteria 2614
144 Ga0436362_0406897 3300039453 Bacteria 8211
145 Ga0439465_0000027 3300041413 Bacteria 29319
146 Ga0451806_069135 3300041462 Bacteria 1981
147 Ga0451806_528624 3300041462 Bacteria 1599
148 Ga0439445_0008859 3300042004 Bacteria 2363
149 Ga0439449_0000223 3300042007 Bacteria 20305
150 Ga0451577_0089108 3300042876 Bacteria 2753
151 Ga0466982_0000037 3300044672 Bacteria 42622
152 Ga0466965_0037457 3300044683 Bacteria 2381
153 Ga0453684_0022799 3300044712 Bacteria 9271
154 Ga0466957_0007929 3300044842 Bacteria 6024
155 Ga0495617_016643 3300046452 Bacteria 2487
156 Ga0495603_0015992 3300046455 Bacteria 4536
157 Ga0495629_0019827 3300046459 Bacteria 4799
158 Ga0495638_0000788 3300046460 Bacteria 33436
159 Ga0495653_0023120 3300046463 Bacteria 5026
160 Ga0495580_0042443 3300046472 Bacteria 3241
161 Ga0495582_0043145 3300046473 Bacteria 2483
162 Ga0495605_0002202 3300046474 Bacteria 12167
163 Ga0495664_0002688 3300046477 Bacteria 9564
164 Ga0495607_0000256 3300046501 Bacteria 57167
165 Ga0495607_0014910 3300046501 Bacteria 5052
166 Ga0495583_0016886 3300046506 Bacteria 3900
167 Ga0495583_0017343 3300046506 Bacteria 3825
168 Ga0495610_0074282 3300046512 Bacteria 1578
169 Ga0495618_0001116 3300046514 Bacteria 18155
170 Ga0495628_0063637 3300046516 Bacteria 2889
171 Ga0495631_0001806 3300046518 Bacteria 12649
172 Ga0495632_0000817 3300046519 Bacteria 27522
173 Ga0495643_0009817 3300046522 Bacteria 5921
174 Ga0495648_0010196 3300046524 Bacteria 7177
175 Ga0495648_0047909 3300046524 Bacteria 2636
176 Ga0495666_0000165 3300046526 Bacteria 27949
177 Ga0495642_0005726 3300046528 Bacteria 4768
178 Ga0495665_0043963 3300046531 Bacteria 2374
179 Ga0495640_0001348 3300046533 Bacteria 19310
180 Ga0495586_0037640 3300046535 Bacteria 2597
181 Ga0495622_0151275 3300046557 Bacteria 1050
182 Ga0495668_0007781 3300046616 Bacteria 6794
183 Ga0495668_0019407 3300046616 Bacteria 3920
184 Ga0495634_0000855 3300046642 Bacteria 29347
185 Ga0495625_0002071 3300046660 Bacteria 22487
186 Ga0495625_0008223 3300046660 Bacteria 8926
187 Ga0495635_0019856 3300046663 Bacteria 4682
188 Ga0495661_0006047 3300046665 Bacteria 8527
189 Ga0495661_0012674 3300046665 Bacteria 5690
190 Ga0495599_0022981 3300046678 Bacteria 3895
191 Ga0495623_0057684 3300046679 Bacteria 2442
192 Ga0495646_0054622 3300046680 Bacteria 2401
193 Ga0495613_0001821 3300046689 Bacteria 16207
194 Ga0495670_0055575 3300046691 Bacteria 1985
195 Ga0495649_0003270 3300046694 Bacteria 11033
196 Ga0495660_0008770 3300046810 Bacteria 5905
197 Ga0495581_0007267 3300047315 Bacteria 6405
198 Ga0495604_0059384 3300047317 Bacteria 2931
199 Ga0495674_0009309 3300047319 Bacteria 9336
200 Ga0495676_0001816 3300047321 Bacteria 18695
201 Ga0495680_0003907 3300047322 Bacteria 14416
202 Ga0495687_014280 3300047443 Bacteria 4094
203 Ga0495679_001660 3300047446 Bacteria 12381
204 Ga0495686_0013395 3300047472 Bacteria 5690
205 Ga0495593_0020336 3300047673 Bacteria 3718
206 Ga0495602_0004785 3300048088 Bacteria 14151
207 Ga0495614_0000718 3300048089 Bacteria 13991
208 Ga0496101_0001166 3300048904 Bacteria 15726
209 Ga0496108_0222670 3300048911 Unclassified 1639
210 Ga0496109_0042016 3300048912 Unclassified 4141
211 Ga0496113_0056131 3300048916 Bacteria 2955
212 Ga0496114_0000303 3300048917 Bacteria 36267
213 Ga0496115_0000141 3300048918 Bacteria 66768
214 Ga0496117_0000728 3300048920 Bacteria 51699
215 Ga0496117_0016059 3300048920 Bacteria 6340
216 Ga0496118_0009719 3300048921 Bacteria 9656
217 Ga0496118_0021498 3300048921 Bacteria 5674
218 Ga0496119_0000651 3300048922 Bacteria 46873
219 Ga0496120_0000285 3300048923 Bacteria 85370
220 Ga0496121_0002427 3300048924 Bacteria 28487
221 Ga0496122_0000913 3300048925 Bacteria 54280
222 Ga0496122_0001183 3300048925 Bacteria 44639
223 Ga0496122_0020764 3300048925 Bacteria 5913
224 Ga0496122_0020973 3300048925 Bacteria 5871
225 Ga0496122_0061384 3300048925 Bacteria 2759
226 Ga0496123_0000068 3300048926 Bacteria 208797
227 Ga0496123_0044286 3300048926 Bacteria 3044
228 Ga0496123_0051221 3300048926 Bacteria 2750
229 Ga0496124_0000560 3300048927 Bacteria 62943
230 Ga0496124_0000732 3300048927 Bacteria 53766
231 Ga0496124_0009612 3300048927 Bacteria 9910
232 Ga0496124_0025338 3300048927 Bacteria 5374
233 Ga0496124_0104904 3300048927 Bacteria 2285
234 Ga0496126_0000132 3300048929 Bacteria 172325
235 Ga0496126_0002568 3300048929 Bacteria 24280
236 Ga0496126_0092639 3300048929 Bacteria 2655
237 Ga0501031_0001893 3300049568 Bacteria 13195
238 Ga0501031_0047857 3300049568 Bacteria 2787
239 Ga0501032_0000347 3300049569 Bacteria 38712
240 Ga0501032_0021304 3300049569 Bacteria 4507
241 Ga0501032_0115821 3300049569 Bacteria 1772
242 Ga0501033_0001128 3300049570 Bacteria 24173
243 Ga0501033_0001195 3300049570 Bacteria 23419
244 Ga0501033_0004097 3300049570 Bacteria 11751
245 Ga0501034_0004642 3300049571 Bacteria 15210
246 Ga0501034_0009657 3300049571 Bacteria 10089
247 Ga0501036_0000478 3300049572 Bacteria 28581
248 Ga0501037_0000473 3300049573 Bacteria 32620
249 Ga0501037_0041018 3300049573 Bacteria 3405
250 Ga0501037_0116554 3300049573 Bacteria 1922
251 Ga0501037_0161511 3300049573 Bacteria 1597
252 Ga0501038_0008553 3300049574 Bacteria 9398
253 Ga0501038_0041246 3300049574 Bacteria 4026
254 Ga0501038_0051495 3300049574 Bacteria 3552
255 Ga0501038_0176126 3300049574 Bacteria 1728
256 Ga0501039_0001356 3300049575 Bacteria 17939
257 Ga0501039_0050348 3300049575 Bacteria 3222
258 Ga0501040_0000154 3300049576 Bacteria 38226
259 Ga0501040_0000822 3300049576 Bacteria 19406
260 Ga0501042_0000040 3300049578 Bacteria 42653
261 Ga0501042_0003268 3300049578 Bacteria 10139
262 Ga0501043_0000887 3300049579 Bacteria 26535
263 Ga0501043_0069054 3300049579 Bacteria 2775
264 Ga0501046_0002039 3300049580 Bacteria 19200
265 Ga0501046_0018601 3300049580 Bacteria 5776
266 Ga0501047_0000694 3300049581 Bacteria 35179
267 Ga0501047_0007825 3300049581 Bacteria 10065
268 Ga0501047_0081701 3300049581 Bacteria 3106
269 Ga0501048_0001035 3300049582 Bacteria 20817
270 Ga0501068_0000204 3300049584 Bacteria 28405
271 Ga0501069_0053224 3300049585 Bacteria 2254
272 Ga0501070_0027467 3300049586 Bacteria 4774
273 Ga0501070_0050336 3300049586 Bacteria 3459
274 Ga0501070_0177472 3300049586 Bacteria 1753
275 Ga0501074_0055740 3300049590 Bacteria 2848
276 Ga0501080_0030284 3300049742 Bacteria 5042
277 Ga0501080_0043827 3300049742 Bacteria 4166
278 Ga0501080_0112009 3300049742 Bacteria 2529
279 Ga0501279_004534 3300049775 Bacteria 1825
280 Ga0501035_0001561 3300049822 Bacteria 23308
281 Ga0501035_0002182 3300049822 Bacteria 19416
282 Ga0501035_0052001 3300049822 Bacteria 3666
283 Ga0501044_0000540 3300049823 Bacteria 45953
284 Ga0501044_0000772 3300049823 Bacteria 38845
285 Ga0501044_0004739 3300049823 Bacteria 15204
286 Ga0501044_0021596 3300049823 Bacteria 6864
287 Ga0501045_0002457 3300049824 Bacteria 12593
288 nmdc:mga03683_42712_c1 3300050489 Bacteria 1867
289 nmdc:mga00v17_11914_c1 3300050491 Bacteria 4788
290 nmdc:mga0k408_7331_c1 3300050493 Bacteria 5892
291 nmdc:mga06z11_78533_c1 3300050494 Bacteria 1765
292 nmdc:mga08y16_15423_c1 3300050511 Bacteria 8036
293 nmdc:mga0sz30_57799_c1 3300050516 Bacteria 1653
294 Ga0495595_0040878 3300053084 Bacteria 2120
295 Ga0500644_0005382 3300053088 Bacteria 3232
296 Ga0500646_0008796 3300053090 Bacteria 2586
297 Ga0500651_0000304 3300053093 Bacteria 28479
298 Ga0500651_0020578 3300053093 Bacteria 4108
299 Ga0500569_005095 3300053109 Bacteria 2806
300 Ga0500594_0003224 3300053118 Bacteria 3573
301 Ga0500594_0004923 3300053118 Bacteria 2953
302 Ga0500618_001098 3300053125 Bacteria 13298
303 Ga0500618_003694 3300053125 Bacteria 5158
304 Ga0500618_011356 3300053125 Bacteria 2364
305 Ga0500559_0127696 3300053136 Bacteria 1186
306 Ga0500568_0001437 3300053139 Bacteria 15433
307 Ga0500573_0044557 3300053140 Bacteria 2559
308 Ga0500604_0002763 3300053151 Bacteria 4770
309 Ga0500616_0003072 3300053153 Bacteria 13111

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046452 Ga0495617_016643 Ga0495617_016643_990_1898 268
2 3300046557 Ga0495622_0151275 Ga0495622_0151275_25_1020 309
3 3300046477 Ga0495664_0002688 Ga0495664_0002688_5948_7093 313
4 3300049573 Ga0501037_0116554 Ga0501037_0116554_10_975 321
5 3300001989 JGI24739J22299_10030007 JGI24739J22299_100300072 323
6 3300013105 Ga0157369_10005934 Ga0157369_1000593412 323
7 3300025924 Ga0207694_10049854 Ga0207694_100498543 324
8 3300013307 Ga0157372_10040343 Ga0157372_100403433 325
9 3300005435 Ga0070714_100394251 Ga0070714_1003942511 326
10 3300015262 Ga0182007_10009882 Ga0182007_100098823 327
11 3300046512 Ga0495610_0074282 Ga0495610_0074282_440_1555 327
12 3300046694 Ga0495649_0003270 Ga0495649_0003270_3066_4181 327
13 3300005327 Ga0070658_10002838 Ga0070658_100028384 328
14 3300005366 Ga0070659_100084495 Ga0070659_1000844951 328
15 3300005563 Ga0068855_100001839 Ga0068855_10000183915 328
16 3300025909 Ga0207705_10001667 Ga0207705_100016678 329
17 3300025932 Ga0207690_10061561 Ga0207690_100615612 329
18 3300025949 Ga0207667_10003893 Ga0207667_100038938 329
19 3300048924 Ga0496121_0002427 Ga0496121_0002427_15730_16911 329
20 3300048929 Ga0496126_0002568 Ga0496126_0002568_7466_8647 329
21 3300009551 Ga0105238_10027286 Ga0105238_100272865 332
22 3300025904 Ga0207647_10002005 Ga0207647_1000200513 332
23 3300053140 Ga0500573_0044557 Ga0500573_0044557_199_1314 333
24 3300037312 Ga0395899_0034884 Ga0395899_0034884_333_1487 335
25 3300037466 Ga0395898_0040654 Ga0395898_0040654_2411_3565 335
26 3300038443 Ga0395901_0030822 Ga0395901_0030822_1032_2186 335
27 3300014326 Ga0157380_10132968 Ga0157380_101329682 336
28 3300025292 Ga0209676_1004328 Ga0209676_10043284 336
29 3300053088 Ga0500644_0005382 Ga0500644_0005382_789_1895 336
30 3300053093 Ga0500651_0020578 Ga0500651_0020578_165_1271 336
31 3300046455 Ga0495603_0015992 Ga0495603_0015992_370_1590 338
32 3300046459 Ga0495629_0019827 Ga0495629_0019827_3210_4430 338
33 3300046463 Ga0495653_0023120 Ga0495653_0023120_3012_4232 338
34 3300046472 Ga0495580_0042443 Ga0495580_0042443_370_1590 338
35 3300046473 Ga0495582_0043145 Ga0495582_0043145_785_2005 338
36 3300046514 Ga0495618_0001116 Ga0495618_0001116_15832_17052 338
37 3300046516 Ga0495628_0063637 Ga0495628_0063637_900_2120 338
38 3300046524 Ga0495648_0010196 Ga0495648_0010196_540_1760 338
39 3300046526 Ga0495666_0000165 Ga0495666_0000165_11205_12425 338
40 3300046531 Ga0495665_0043963 Ga0495665_0043963_351_1571 338
41 3300046533 Ga0495640_0001348 Ga0495640_0001348_478_1698 338
42 3300046535 Ga0495586_0037640 Ga0495586_0037640_478_1698 338
43 3300046642 Ga0495634_0000855 Ga0495634_0000855_13471_14691 338
44 3300046663 Ga0495635_0019856 Ga0495635_0019856_2649_3869 338
45 3300046665 Ga0495661_0006047 Ga0495661_0006047_6386_7606 338
46 3300046678 Ga0495599_0022981 Ga0495599_0022981_613_1833 338
47 3300046679 Ga0495623_0057684 Ga0495623_0057684_478_1698 338
48 3300046680 Ga0495646_0054622 Ga0495646_0054622_812_2032 338
49 3300046689 Ga0495613_0001821 Ga0495613_0001821_3785_5005 338
50 3300047315 Ga0495581_0007267 Ga0495581_0007267_2696_3916 338
51 3300047317 Ga0495604_0059384 Ga0495604_0059384_682_1902 338
52 3300047319 Ga0495674_0009309 Ga0495674_0009309_2252_3472 338
53 3300047321 Ga0495676_0001816 Ga0495676_0001816_13779_14999 338
54 3300047322 Ga0495680_0003907 Ga0495680_0003907_247_1467 338
55 3300047446 Ga0495679_001660 Ga0495679_001660_11123_12343 338
56 3300047673 Ga0495593_0020336 Ga0495593_0020336_247_1467 338
57 3300048088 Ga0495602_0004785 Ga0495602_0004785_12812_14032 338
58 3300048089 Ga0495614_0000718 Ga0495614_0000718_6803_8023 338
59 3300048925 Ga0496122_0061384 Ga0496122_0061384_1234_2328 338
60 3300049573 Ga0501037_0041018 Ga0501037_0041018_1925_3004 338
61 3300053125 Ga0500618_011356 Ga0500618_011356_234_1346 338
62 3300032004 Ga0307414_10008988 Ga0307414_100089882 339
63 3300032004 Ga0307414_10268020 Ga0307414_102680202 339
64 3300037466 Ga0395898_0104603 Ga0395898_0104603_211_1317 340
65 3300037471 Ga0395905_0158950 Ga0395905_0158950_625_1731 340
66 3300046506 Ga0495583_0017343 Ga0495583_0017343_708_1826 340
67 3300048916 Ga0496113_0056131 Ga0496113_0056131_302_1402 340
68 3300053093 Ga0500651_0000304 Ga0500651_0000304_64_1146 340
69 3300003320 rootH2_10028684 rootH2_100286842 341
70 3300003320 rootH2_10053268 rootH2_100532682 341
71 3300006178 Ga0075367_10040205 Ga0075367_100402054 341
72 3300009765 Ga0123341_1038330 Ga0123341_10383303 341
73 3300025294 Ga0209025_1016641 Ga0209025_10166413 341
74 3300025908 Ga0207643_10031887 Ga0207643_100318872 341
75 3300031911 Ga0307412_10005675 Ga0307412_100056758 341
76 3300037418 Ga0395900_0005892 Ga0395900_0005892_8077_9177 341
77 3300037466 Ga0395898_0036526 Ga0395898_0036526_2086_3186 341
78 3300037471 Ga0395905_0123784 Ga0395905_0123784_1163_2263 341
79 3300037853 Ga0436364_0519232 Ga0436364_0519232_53468_54577 341
80 3300038443 Ga0395901_0015669 Ga0395901_0015669_199_1299 341
81 3300046460 Ga0495638_0000788 Ga0495638_0000788_3289_4410 341
82 3300046474 Ga0495605_0002202 Ga0495605_0002202_5707_6828 341
83 3300046506 Ga0495583_0016886 Ga0495583_0016886_2619_3740 341
84 3300046518 Ga0495631_0001806 Ga0495631_0001806_5447_6568 341
85 3300046519 Ga0495632_0000817 Ga0495632_0000817_6117_7238 341
86 3300046522 Ga0495643_0009817 Ga0495643_0009817_680_1786 341
87 3300046524 Ga0495648_0047909 Ga0495648_0047909_1038_2159 341
88 3300046528 Ga0495642_0005726 Ga0495642_0005726_750_1856 341
89 3300046616 Ga0495668_0007781 Ga0495668_0007781_3831_4952 341
90 3300046616 Ga0495668_0019407 Ga0495668_0019407_1088_2194 341
91 3300046660 Ga0495625_0002071 Ga0495625_0002071_20197_21327 341
92 3300046660 Ga0495625_0008223 Ga0495625_0008223_6190_7311 341
93 3300046665 Ga0495661_0012674 Ga0495661_0012674_2701_3807 341
94 3300046691 Ga0495670_0055575 Ga0495670_0055575_442_1563 341
95 3300046810 Ga0495660_0008770 Ga0495660_0008770_1665_2786 341
96 3300047443 Ga0495687_014280 Ga0495687_014280_2850_3956 341
97 3300053109 Ga0500569_005095 Ga0500569_005095_587_1708 341
98 3300053118 Ga0500594_0004923 Ga0500594_0004923_486_1607 341
99 3300053139 Ga0500568_0001437 Ga0500568_0001437_540_1661 341
100 3300053153 Ga0500616_0003072 Ga0500616_0003072_3443_4564 341
101 3300053136 Ga0500559_0127696 Ga0500559_0127696_16_1113 342
102 3300049576 Ga0501040_0000154 Ga0501040_0000154_36285_37388 343
103 3300049578 Ga0501042_0000040 Ga0501042_0000040_21050_22153 343
104 3300049742 Ga0501080_0112009 Ga0501080_0112009_1287_2408 343
105 3300003771 Ga0055526_1005487 Ga0055526_10054876 345
106 3300003775 Ga0055524_1000020 Ga0055524_100002085 345
107 3300025291 Ga0209675_1001268 Ga0209675_10012685 345
108 3300025295 Ga0209564_1000049 Ga0209564_1000049207 345
109 3300025299 Ga0209256_1000014 Ga0209256_1000014432 345
110 3300048920 Ga0496117_0016059 Ga0496117_0016059_4720_5853 345
111 3300048927 Ga0496124_0104904 Ga0496124_0104904_677_1810 345
112 3300002773 JGI25152J39213_1000112 JGI25152J39213_100011231 347
113 3300002774 JGI25150J39212_1000284 JGI25150J39212_10002847 347
114 3300003187 JGI25151J46595_10000057 JGI25151J46595_1000005725 347
115 3300003215 JGI25153J46596_10000041 JGI25153J46596_1000004132 347
116 3300013104 Ga0157370_10000891 Ga0157370_1000089131 347
117 3300015265 Ga0182005_1000138 Ga0182005_10001386 347
118 3300025245 Ga0207425_1000044 Ga0207425_1000044154 347
119 3300025258 Ga0209129_1000044 Ga0209129_1000044122 347
120 3300025294 Ga0209025_1000012 Ga0209025_1000012378 347
121 3300025297 Ga0209758_1000018 Ga0209758_1000018279 347
122 3300035092 Ga0373952_0000466 Ga0373952_0000466_2597_3706 347
123 3300048921 Ga0496118_0009719 Ga0496118_0009719_3445_4545 347
124 3300025258 Ga0209129_1002112 Ga0209129_10021123 348
125 3300025299 Ga0209256_1012926 Ga0209256_10129262 348
126 3300038705 Ga0237819_00005 Ga0237819_00005_9694_10812 348
127 3300046501 Ga0495607_0000256 Ga0495607_0000256_19116_20240 348
128 3300046501 Ga0495607_0014910 Ga0495607_0014910_1158_2297 348
129 3300048927 Ga0496124_0025338 Ga0496124_0025338_1805_2929 348
130 3300032133 Ga0316583_10028067 Ga0316583_100280672 349
131 3300005563 Ga0068855_100098774 Ga0068855_1000987743 350
132 3300009093 Ga0105240_10033553 Ga0105240_100335535 350
133 3300009551 Ga0105238_10001377 Ga0105238_1000137712 350
134 3300010375 Ga0105239_10032972 Ga0105239_100329725 350
135 3300015261 Ga0182006_1016294 Ga0182006_10162943 350
136 3300025913 Ga0207695_10018668 Ga0207695_100186685 350
137 3300025914 Ga0207671_10037030 Ga0207671_100370303 350
138 3300025924 Ga0207694_10003192 Ga0207694_1000319211 350
139 3300025949 Ga0207667_10010021 Ga0207667_100100219 350
140 3300053125 Ga0500618_001098 Ga0500618_001098_1305_2426 350
141 3300031507 Ga0307509_10068087 Ga0307509_100680874 352
142 3300003781 Ga0055536_1010208 Ga0055536_10102083 353
143 3300005367 Ga0070667_100047208 Ga0070667_1000472084 353
144 3300025292 Ga0209676_1000024 Ga0209676_10000249 353
145 3300025938 Ga0207704_10052055 Ga0207704_100520553 353
146 iso_pu_bacteria 2842775625 2842779568 353
147 3300039447 Ga0436361_0254093 Ga0436361_0254093_164_1279 354
148 3300044712 Ga0453684_0022799 Ga0453684_0022799_3655_4722 354
149 iso_pu_bacteria 8002745576 8002745667 354
150 3300003751 Ga0055538_1000002 Ga0055538_1000002653 355
151 3300003752 Ga0055539_1000002 Ga0055539_1000002653 355
152 3300003756 Ga0055533_1000004 Ga0055533_1000004653 355
153 3300003759 Ga0055525_1000002 Ga0055525_1000002653 355
154 3300003841 Ga0055541_1000002 Ga0055541_1000002190 355
155 3300021361 Ga0213872_10001891 Ga0213872_100018917 355
156 3300025224 Ga0209784_100002 Ga0209784_100002876 355
157 3300025225 Ga0209566_100003 Ga0209566_100003876 355
158 3300025226 Ga0209674_100004 Ga0209674_100004876 355
159 3300025230 Ga0209563_100006 Ga0209563_100006876 355
160 3300025253 Ga0209677_100003 Ga0209677_100003876 355
161 iso_pu_bacteria 2854681122 2854682041 355
162 3300011119 Ga0105246_10167049 Ga0105246_101670491 356
163 3300037853 Ga0436364_1215387 Ga0436364_1215387_63995_65125 356
164 3300005563 Ga0068855_100002181 Ga0068855_10000218112 357
165 3300025949 Ga0207667_10000025 Ga0207667_10000025274 357
166 3300025949 Ga0207667_10000067 Ga0207667_1000006769 357
167 3300032168 Ga0316593_10000481 Ga0316593_100004812 357
168 3300036647 Ga0316582_0154609 Ga0316582_0154609_343_1452 357
169 3300036712 Ga0316584_0110429 Ga0316584_0110429_755_1864 357
170 3300041413 Ga0439465_0000027 Ga0439465_0000027_364_1548 357
171 3300005339 Ga0070660_100188521 Ga0070660_1001885212 358
172 3300005262 Ga0065165_1000260 Ga0065165_100026044 359
173 3300005435 Ga0070714_100337251 Ga0070714_1003372511 359
174 3300005467 Ga0070706_100165908 Ga0070706_1001659082 359
175 3300005530 Ga0070679_100028895 Ga0070679_1000288954 359
176 3300013104 Ga0157370_10021564 Ga0157370_100215643 359
177 3300013308 Ga0157375_10066643 Ga0157375_100666432 359
178 3300025929 Ga0207664_10034070 Ga0207664_100340703 359
179 3300044672 Ga0466982_0000037 Ga0466982_0000037_20151_21275 359
180 3300044842 Ga0466957_0007929 Ga0466957_0007929_3386_4525 359
181 3300048912 Ga0496109_0042016 Ga0496109_0042016_2235_3347 359
182 3300048917 Ga0496114_0000303 Ga0496114_0000303_54_1166 359
183 3300053084 Ga0495595_0040878 Ga0495595_0040878_292_1389 359
184 3300053118 Ga0500594_0003224 Ga0500594_0003224_929_2041 359
185 3300005458 Ga0070681_10024042 Ga0070681_100240426 360
186 3300005614 Ga0068856_100016450 Ga0068856_1000164502 360
187 3300006195 Ga0075366_10041455 Ga0075366_100414552 360
188 3300013100 Ga0157373_10062129 Ga0157373_100621293 360
189 3300030521 Ga0307511_10001752 Ga0307511_100017528 360
190 3300033524 Ga0316592_1022138 Ga0316592_10221381 360
191 3300036712 Ga0316584_0009830 Ga0316584_0009830_4857_5975 360
192 3300037418 Ga0395900_0379490 Ga0395900_0379490_35_1162 360
193 3300042007 Ga0439449_0000223 Ga0439449_0000223_4890_6074 360
194 3300049568 Ga0501031_0001893 Ga0501031_0001893_2914_4053 360
195 3300049568 Ga0501031_0047857 Ga0501031_0047857_761_1900 360
196 3300049569 Ga0501032_0000347 Ga0501032_0000347_18545_19684 360
197 3300049569 Ga0501032_0021304 Ga0501032_0021304_3325_4464 360
198 3300049569 Ga0501032_0115821 Ga0501032_0115821_134_1273 360
199 3300049570 Ga0501033_0001128 Ga0501033_0001128_15631_16770 360
200 3300049570 Ga0501033_0001195 Ga0501033_0001195_16715_17854 360
201 3300049570 Ga0501033_0004097 Ga0501033_0004097_8518_9657 360
202 3300049571 Ga0501034_0004642 Ga0501034_0004642_2147_3328 360
203 3300049571 Ga0501034_0009657 Ga0501034_0009657_5741_6880 360
204 3300049572 Ga0501036_0000478 Ga0501036_0000478_19315_20454 360
205 3300049573 Ga0501037_0000473 Ga0501037_0000473_19029_20168 360
206 3300049573 Ga0501037_0161511 Ga0501037_0161511_294_1418 360
207 3300049574 Ga0501038_0008553 Ga0501038_0008553_8138_9262 360
208 3300049574 Ga0501038_0041246 Ga0501038_0041246_121_1245 360
209 3300049574 Ga0501038_0051495 Ga0501038_0051495_1888_3027 360
210 3300049574 Ga0501038_0176126 Ga0501038_0176126_236_1375 360
211 3300049575 Ga0501039_0001356 Ga0501039_0001356_9397_10536 360
212 3300049575 Ga0501039_0050348 Ga0501039_0050348_1877_3016 360
213 3300049576 Ga0501040_0000822 Ga0501040_0000822_8379_9518 360
214 3300049578 Ga0501042_0003268 Ga0501042_0003268_637_1776 360
215 3300049579 Ga0501043_0000887 Ga0501043_0000887_6368_7507 360
216 3300049579 Ga0501043_0069054 Ga0501043_0069054_1401_2525 360
217 3300049580 Ga0501046_0002039 Ga0501046_0002039_9889_11028 360
218 3300049580 Ga0501046_0018601 Ga0501046_0018601_2779_3918 360
219 3300049581 Ga0501047_0000694 Ga0501047_0000694_18839_19978 360
220 3300049581 Ga0501047_0081701 Ga0501047_0081701_917_2056 360
221 3300049582 Ga0501048_0001035 Ga0501048_0001035_653_1792 360
222 3300049584 Ga0501068_0000204 Ga0501068_0000204_8392_9531 360
223 3300049822 Ga0501035_0001561 Ga0501035_0001561_21816_22955 360
224 3300049822 Ga0501035_0002182 Ga0501035_0002182_8392_9531 360
225 3300049822 Ga0501035_0052001 Ga0501035_0052001_969_2093 360
226 3300049823 Ga0501044_0000540 Ga0501044_0000540_30379_31503 360
227 3300049823 Ga0501044_0000772 Ga0501044_0000772_18839_19978 360
228 3300049823 Ga0501044_0004739 Ga0501044_0004739_8519_9658 360
229 3300049823 Ga0501044_0021596 Ga0501044_0021596_2925_4064 360
230 3300049824 Ga0501045_0002457 Ga0501045_0002457_8701_9840 360
231 3300053090 Ga0500646_0008796 Ga0500646_0008796_594_1715 360
232 3300053151 Ga0500604_0002763 Ga0500604_0002763_1146_2267 360
233 3300005435 Ga0070714_100000273 Ga0070714_10000027338 361
234 3300005614 Ga0068856_100002720 Ga0068856_10000272015 361
235 3300006042 Ga0075368_10000521 Ga0075368_100005216 361
236 3300006048 Ga0075363_100007127 Ga0075363_1000071275 361
237 3300006177 Ga0075362_10005698 Ga0075362_100056983 361
238 3300006186 Ga0075369_10014939 Ga0075369_100149392 361
239 3300006195 Ga0075366_10007243 Ga0075366_100072433 361
240 3300006353 Ga0075370_10043038 Ga0075370_100430383 361
241 3300009094 Ga0111539_10142849 Ga0111539_101428493 361
242 3300021358 Ga0213873_10012908 Ga0213873_100129082 361
243 3300021377 Ga0213874_10008065 Ga0213874_100080652 361
244 3300026078 Ga0207702_10003108 Ga0207702_1000310811 361
245 3300027907 Ga0207428_10093775 Ga0207428_100937752 361
246 3300028573 Ga0265334_10000068 Ga0265334_1000006816 361
247 3300031251 Ga0265327_10075780 Ga0265327_100757802 361
248 3300031548 Ga0307408_100002931 Ga0307408_1000029316 361
249 3300039438 Ga0436360_1190745 Ga0436360_1190745_15_1124 361
250 3300039450 Ga0436363_0023489 Ga0436363_0023489_233_1369 361
251 3300039453 Ga0436362_0406897 Ga0436362_0406897_5798_6907 361
252 3300042004 Ga0439445_0008859 Ga0439445_0008859_954_2069 361
253 3300047472 Ga0495686_0013395 Ga0495686_0013395_3202_4320 361
254 3300048911 Ga0496108_0222670 Ga0496108_0222670_316_1449 361
255 3300049585 Ga0501069_0053224 Ga0501069_0053224_97_1206 361
256 3300049586 Ga0501070_0027467 Ga0501070_0027467_3065_4174 361
257 3300049586 Ga0501070_0177472 Ga0501070_0177472_576_1685 361
258 3300049590 Ga0501074_0055740 Ga0501074_0055740_1474_2583 361
259 3300050489 nmdc:mga03683_42712_c1 nmdc:mga03683_42712_c1_547_1671 361
260 3300050491 nmdc:mga00v17_11914_c1 nmdc:mga00v17_11914_c1_1197_2321 361
261 3300050493 nmdc:mga0k408_7331_c1 nmdc:mga0k408_7331_c1_3563_4687 361
262 3300050494 nmdc:mga06z11_78533_c1 nmdc:mga06z11_78533_c1_69_1193 361
263 3300050511 nmdc:mga08y16_15423_c1 nmdc:mga08y16_15423_c1_6541_7689 361
264 iso_pu_bacteria 2511231026 2511384420 361
265 iso_pu_bacteria 2818991440 2819564217 361
266 iso_pu_bacteria 2904463128 2904464856 361
267 3300014969 Ga0157376_10198214 Ga0157376_101982142 362
268 3300031616 Ga0307508_10006732 Ga0307508_1000673210 362
269 3300039447 Ga0436361_0112290 Ga0436361_0112290_8512_9621 362
270 3300044683 Ga0466965_0037457 Ga0466965_0037457_138_1250 362
271 3300048918 Ga0496115_0000141 Ga0496115_0000141_59975_61075 362
272 3300048929 Ga0496126_0000132 Ga0496126_0000132_5272_6372 362
273 3300049581 Ga0501047_0007825 Ga0501047_0007825_7575_8684 362
274 3300049742 Ga0501080_0043827 Ga0501080_0043827_2660_3769 362
275 3300049775 Ga0501279_004534 Ga0501279_004534_384_1490 362
276 iso_pu_bacteria 2852618963 2852622077 362
277 3300042876 Ga0451577_0089108 Ga0451577_0089108_1317_2420 363
278 iso_pu_bacteria 2521172590 2521557998 364
279 iso_pu_bacteria 2839094727 2839095988 364
280 iso_pu_bacteria 2904439833 2904441225 364
281 iso_pu_bacteria 2904530477 2904531834 364
282 iso_pu_bacteria 2904584206 2904587940 364
283 iso_pu_bacteria 2904589729 2904589900 364
284 iso_pu_bacteria 2904601388 2904602714 364
285 iso_pu_bacteria 2919046199 2919046465 364
286 iso_pu_bacteria 2919079590 2919079782 364
287 iso_pu_bacteria 2923510766 2923511247 364
288 3300003578 Ga0006562J51391_1007274 Ga0006562J51391_10072749 365
289 3300006186 Ga0075369_10035408 Ga0075369_100354082 365
290 3300017792 Ga0163161_10008123 Ga0163161_100081235 365
291 3300025233 Ga0209437_101074 Ga0209437_1010746 365
292 3300025254 Ga0209148_1007161 Ga0209148_10071612 365
293 3300041462 Ga0451806_528624 Ga0451806_528624_346_1470 365
294 3300048904 Ga0496101_0001166 Ga0496101_0001166_2109_3233 365
295 3300048925 Ga0496122_0020764 Ga0496122_0020764_1801_2940 365
296 3300048925 Ga0496122_0020973 Ga0496122_0020973_1783_2907 365
297 3300048926 Ga0496123_0044286 Ga0496123_0044286_1163_2302 365
298 3300048927 Ga0496124_0000560 Ga0496124_0000560_4647_5771 365
299 3300048927 Ga0496124_0009612 Ga0496124_0009612_5443_6567 365
300 3300050516 nmdc:mga0sz30_57799_c1 nmdc:mga0sz30_57799_c1_217_1341 365
301 iso_pu_bacteria 2551306416 2553003130 365
302 iso_pu_bacteria 2593339238 2595447075 365
303 iso_pu_bacteria 2593339239 2595449832 365
304 iso_pu_bacteria 2643221579 2643908612 365
305 iso_pu_bacteria 2643221581 2643916408 365
306 iso_pu_bacteria 2765235838 2765569125 365
307 iso_pu_bacteria 2818991449 2819614854 365
308 iso_pu_bacteria 2842914999 2842918102 365
309 iso_pu_bacteria 2842918807 2842920131 365
310 iso_pu_bacteria 2919085039 2919087501 365
311 iso_pu_bacteria 2919404418 2919406366 365
312 iso_pu_bacteria 2923516293 2923518192 365
313 iso_pu_bacteria 2928130867 2928131183 365
314 iso_pu_bacteria 2953994433 2953995421 365
315 iso_pu_bacteria 2808606386 2808984015 367
316 iso_pu_bacteria 2808606415 2809131103 367
317 iso_pu_bacteria 2808606419 2809150562 367
318 3300048925 Ga0496122_0001183 Ga0496122_0001183_17547_18662 368
319 3300048926 Ga0496123_0051221 Ga0496123_0051221_934_2049 368
320 iso_pu_bacteria 2818991457 2819663879 368
321 iso_pu_bacteria 2852684882 2852685645 368
322 iso_pu_bacteria 8021622325 8021625001 368
323 iso_pu_bacteria 8021626552 8021628973 368
324 iso_pu_bacteria 8021648035 8021649975 368
325 2162886007 SwRhRL2b_contig_250858 SwRhRL2b_0968.00004910 369
326 3300005289 Ga0065704_10010544 Ga0065704_100105442 369
327 3300048929 Ga0496126_0092639 Ga0496126_0092639_1254_2432 369
328 3300053125 Ga0500618_003694 Ga0500618_003694_1487_2641 369
329 3300049586 Ga0501070_0050336 Ga0501070_0050336_313_1614 370
330 3300049742 Ga0501080_0030284 Ga0501080_0030284_3475_4776 370
331 3300021361 Ga0213872_10000401 Ga0213872_100004015 371
332 2162886007 SwRhRL2b_contig_2072087 SwRhRL2b_0701.00002200 372
333 3300005289 Ga0065704_10070856 Ga0065704_1007085615 372
334 3300005331 Ga0070670_100001618 Ga0070670_10000161811 372
335 3300009011 Ga0105251_10000094 Ga0105251_1000009444 372
336 3300015265 Ga0182005_1001505 Ga0182005_10015058 372
337 3300025735 Ga0207713_1000257 Ga0207713_100025727 372
338 3300025925 Ga0207650_10002399 Ga0207650_100023993 372
339 3300027312 Ga0209371_1000072 Ga0209371_1000072108 372
340 3300030500 Ga0268256_1000065 Ga0268256_1000065108 372
341 3300041462 Ga0451806_069135 Ga0451806_069135_341_1459 372
342 3300048920 Ga0496117_0000728 Ga0496117_0000728_15463_16581 372
343 3300048921 Ga0496118_0021498 Ga0496118_0021498_2682_3800 372
344 3300048922 Ga0496119_0000651 Ga0496119_0000651_20285_21403 372
345 3300048923 Ga0496120_0000285 Ga0496120_0000285_57813_58931 372
346 3300048925 Ga0496122_0000913 Ga0496122_0000913_26229_27347 372
347 3300048926 Ga0496123_0000068 Ga0496123_0000068_29490_30608 372
348 3300048927 Ga0496124_0000732 Ga0496124_0000732_25499_26617 372
349 iso_pu_bacteria 2895498888 2895503774 372
350 iso_pu_bacteria 2895511927 2895515618 372
351 iso_pu_bacteria 2895522137 2895524811 372
352 iso_pu_bacteria 2895525241 2895528375 372

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02119

FlgI

Flagellar P-ring protein

74

417

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
7nvg-assembly1.cif.gz_r3 salmonella flagellar basal body refined in c1 map 0.6789 27 372
7nvg-assembly1.cif.gz_r3 salmonella flagellar basal body refined in c1 map 0.6768 27 372
7bgl-assembly1.cif.gz_a salmonella lp ring 26 mer refined in c26 map 0.6764 27 372
7clr-assembly1.cif.gz_B cryoem structure of s.typhimurium flagellar lp ring 0.6761 27 372
7cbl-assembly1.cif.gz_a cryo-em structure of the flagellar lp ring from salmonella 0.6748 27 372
ID Description Score Start End Superfamily
3mmlB01 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2; 0.7377 187 256 3.30.1360.40
af_Q8IFQ7_119_193_3.30.1360.40 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2; 0.6867 188 234 3.30.1360.40
2p5mA00 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2; 0.6728 188 247 3.30.1360.40
af_Q54JP5_319_410_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.6684 191 248 3.90.1150.10
af_P38771_80_150_3.30.1360.40 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2; 0.6628 190 234 3.30.1360.40
ID Description Score Start End GO Terms
AF-A0A4R3HXW4-F1-model_v4 Flagellar P-ring protein FlgI 0.9876 191 252 GO:0005198
GO:0009428
GO:0030288
GO:0071973
AF-A0A4Z0KXQ6-F1-model_v4 Flagellar biosynthesis protein FlgA 0.9109 87 231 GO:0005198
GO:0009428
GO:0030288
GO:0071973
AF-A0A4Z0KXQ6-F1-model_v4 Flagellar biosynthesis protein FlgA 0.8992 87 231 GO:0005198
GO:0009428
GO:0030288
GO:0071973
AF-A0A527H6J6-F1-model_v4 Flagellar P-ring protein (Basal body P-ring protein) 0.8937 30 231 GO:0005198
GO:0009428
GO:0030288
GO:0071973
AF-A0A3M1VLX8-F1-model_v4 Flagellar biosynthesis protein FlgA 0.8912 20 217 GO:0005198
GO:0009428
GO:0030288
GO:0071973

Feature Viewer

pLDDT pTM Quality
77.92 0.51 Medium
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Predicted Structure (AlphaFold2)

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