|
Taxon Oid |
3300038705
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Coralloid root microbial communities from various locations in Chiapas, Mexico |
| Genome Name Sample Name |
Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 |
| Sequencing Center |
Langebio Cinvestav |
| Img Genome Id |
3300038705 |
| Ncbi Phylum |
Host-associated |
| Ncbi Class |
Plants |
| Ncbi Order |
Roots |
| Ncbi Family |
Unclassified |
| Ncbi Genus |
Unclassified |
| Ncbi Species |
Coralloid root microbial communities from various locations in Chiapas, Mexico |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.5.0.15 |
| Img Submission Id |
217050 |
|
Gold Analysis Project Id
|
Ga0237819
|
| Gold Analysis Project Type |
Metagenome Analysis |
|
Gold Sequencing Project Id
|
Gp0273954
|
|
Gold Study Id
|
Gs0132935
|
| Add Date |
04/08/2020 00:00:00 |
| Assembly Method |
Custom JGI assembly v. Nielsen et. al. |
| Has Coverage |
True |
| Public Release Date |
04/08/2020 00:00:00 |
| Submission Type |
Primary |
| In File |
Yes |
| Rnd Project |
True |
| Is Published |
False |
| Ncbi Bioproject Accession |
PRJNA369422 |
| Ncbi Biosample Accession |
SAMN06285898 |
| Sequencing Method |
Illumina MiSeq |
| Sequencing Strategy |
Metagenome |
| Ecosystem |
Host-associated |
| Ecosystem Category |
Plants |
| Ecosystem Subtype |
Unclassified |
| Ecosystem Type |
Roots |
| Specific Ecosystem |
Unclassified |
| Cultured |
False |
| Relevance |
Environmental |
| Geographic Location |
Mexico: Raymundo Flores, Chiapas |
| Habitat |
Coralloid root |
| Isolation |
Coralloid roots |
| Isolation Country |
8791 |
| Latitude |
16.0261 |
| Longitude |
-93.5992 |
| Sample Collection Date |
2014/3/1 |
| Host Name |
Dioon merolae |
| Sample Body Site |
Plant-root |
| Genome Size Assembled |
57248430 |
| Gene Count Assembled |
79207 |