F416551

General Info

Members Datasets Scaffolds Average Seq Length
345 196 690 334

Family's Representative Sequence

Representative Sequence 3300049576|Ga0501040_0043341|Ga0501040_0043341_1255_2382
Length 375
Sequence VRILVVGGAGYVGSTSVETFIEAGHDVTVYDNLKSGHRDAVVRGARLVVGSTSDQNRLERVLREHRIQAVLHCASRSLVSESMEHPELYYRENVSNGVKLLEALRERRVNRVVFSSTAAVYGEPKRVPIAEADRTEPINPYGETKLAFEGAMRWYAACHGFRAISLRYFNVAGATERNGEDHEPETHLIPLILKVAAGELPDVRIYGQDYNTPDGTCIRDFIHVRDLASAHLLALEATDEADPSFEVYNLGSAAGFSVREVIEAARKVTGRAIPARVVRRRSGDPPRLVASSRRARRDLGWSPRESSLEQMLADAWAWKLSHPTGYAKRKPRAPRHHGRSGADSGGRGSDVESDGLGPGDESPARPERVAVPVSG

Samples

Sample ID Description Type Environment
1 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
26 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
27 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
33 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
34 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
35 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
39 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
40 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
52 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
53 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
111 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
115 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
116 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
121 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
122 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
123 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
124 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
125 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
126 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
127 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
128 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
129 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
132 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
133 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
134 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
135 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
147 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
148 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
161 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
162 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
163 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
164 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
165 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
166 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
167 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
168 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
169 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
170 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
171 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
172 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
173 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
174 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
176 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
177 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
182 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
183 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
184 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
185 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
186 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
187 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
188 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
189 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
190 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
191 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
192 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
193 2969141011 Bacillus velezensis MH25 Isolate Unclassified
194 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
195 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
196 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.94
Metatranscriptomes 0
Isolates 4.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 5.51
Rhizosphere 90.14
Stem 0
Stem Tuber 0
Unclassified 1.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501040_0043341 3300049576 Bacteria 3067
2 SwRhRL3b_contig_2655544 2162886006 Bacteria 1369
3 JGI25406J46586_10000002 3300003203 Bacteria 202415
4 rootH1_10041413 3300003316 Bacteria 5554
5 Ga0065715_10024771 3300005293 Bacteria 2380
6 Ga0065715_10216660 3300005293 Bacteria 1280
7 Ga0065707_10000716 3300005295 Bacteria 22427
8 Ga0070676_10002974 3300005328 Bacteria 8759
9 Ga0070676_10059385 3300005328 Bacteria 2268
10 Ga0070690_100097060 3300005330 Bacteria 1949
11 Ga0070670_100017676 3300005331 Bacteria 6119
12 Ga0070670_100073058 3300005331 Bacteria 2946
13 Ga0070666_10091874 3300005335 Bacteria 2086
14 Ga0068868_100018660 3300005338 Bacteria 5190
15 Ga0068868_100261979 3300005338 Bacteria 1458
16 Ga0070660_100295955 3300005339 Bacteria 1326
17 Ga0070689_100057744 3300005340 Bacteria 3013
18 Ga0070689_100247573 3300005340 Bacteria 1470
19 Ga0070687_100003431 3300005343 Bacteria 6154
20 Ga0070668_100073683 3300005347 Bacteria 2662
21 Ga0070668_100074344 3300005347 Bacteria 2651
22 Ga0070668_100337568 3300005347 Bacteria 1272
23 Ga0070669_100021682 3300005353 Bacteria 4591
24 Ga0070669_100061353 3300005353 Bacteria 2762
25 Ga0070669_100141126 3300005353 Bacteria 1857
26 Ga0070669_100150030 3300005353 Bacteria 1804
27 Ga0070675_100145992 3300005354 Bacteria 2025
28 Ga0070675_100184080 3300005354 Bacteria 1807
29 Ga0070675_100215024 3300005354 Bacteria 1672
30 Ga0070671_100044216 3300005355 Bacteria 3701
31 Ga0070671_100072088 3300005355 Bacteria 2884
32 Ga0070673_100014214 3300005364 Bacteria 5534
33 Ga0070673_100126456 3300005364 Bacteria 2139
34 Ga0070688_100014538 3300005365 Bacteria 4462
35 Ga0070688_100198516 3300005365 Unclassified 1402
36 Ga0070667_100014973 3300005367 Bacteria 6407
37 Ga0070667_100056954 3300005367 Bacteria 3302
38 Ga0070703_10079536 3300005406 Bacteria 1113
39 Ga0070714_100247201 3300005435 Bacteria 1648
40 Ga0070713_100368857 3300005436 Bacteria 1335
41 Ga0070701_10082047 3300005438 Bacteria 1748
42 Ga0070711_100043680 3300005439 Bacteria 3037
43 Ga0070711_100384668 3300005439 Bacteria 1135
44 Ga0070705_100044678 3300005440 Bacteria 2545
45 Ga0070708_100042551 3300005445 Bacteria 3988
46 Ga0070708_100085533 3300005445 Bacteria 2862
47 Ga0070708_100118433 3300005445 Bacteria 2440
48 Ga0070708_100280063 3300005445 Bacteria 1569
49 Ga0070678_100228972 3300005456 Bacteria 1548
50 Ga0070678_100441330 3300005456 Unclassified 1138
51 Ga0070662_100002545 3300005457 Bacteria 11227
52 Ga0068867_100025031 3300005459 Bacteria 4280
53 Ga0070685_10091390 3300005466 Bacteria 1843
54 Ga0070706_100011843 3300005467 Bacteria 8095
55 Ga0070706_100022798 3300005467 Bacteria 5766
56 Ga0070706_100030016 3300005467 Bacteria 5006
57 Ga0070706_100036658 3300005467 Bacteria 4530
58 Ga0070706_100069764 3300005467 Bacteria 3251
59 Ga0070706_100074206 3300005467 Unclassified 3149
60 Ga0070706_100212524 3300005467 Bacteria 1806
61 Ga0070706_100425064 3300005467 Bacteria 1236
62 Ga0070707_100000312 3300005468 Bacteria 47797
63 Ga0070707_100002233 3300005468 Bacteria 18498
64 Ga0070707_100004497 3300005468 Bacteria 13064
65 Ga0070707_100042290 3300005468 Bacteria 4362
66 Ga0070707_100111129 3300005468 Bacteria 2658
67 Ga0070698_100005998 3300005471 Bacteria 13241
68 Ga0070698_100030828 3300005471 Bacteria 5560
69 Ga0070698_100183001 3300005471 Bacteria 2033
70 Ga0070699_100053259 3300005518 Bacteria 3502
71 Ga0070679_100148009 3300005530 Bacteria 2326
72 Ga0070697_100001172 3300005536 Bacteria 19873
73 Ga0070697_100077350 3300005536 Bacteria 2737
74 Ga0070697_100096079 3300005536 Bacteria 2458
75 Ga0070697_100465473 3300005536 Bacteria 1102
76 Ga0070695_100043756 3300005545 Bacteria 2848
77 Ga0070696_100042099 3300005546 Bacteria 3157
78 Ga0070665_100069510 3300005548 Bacteria 3529
79 Ga0070664_100071215 3300005564 Bacteria 2979
80 Ga0070664_100155046 3300005564 Bacteria 2023
81 Ga0068856_100090546 3300005614 Bacteria 3043
82 Ga0068859_100044114 3300005617 Bacteria 4481
83 Ga0068861_100304404 3300005719 Bacteria 1382
84 Ga0068863_100518188 3300005841 Bacteria 1175
85 Ga0068858_100077102 3300005842 Bacteria 3096
86 Ga0068860_100202463 3300005843 Bacteria 1924
87 Ga0068862_100005129 3300005844 Bacteria 11011
88 Ga0068862_100094705 3300005844 Bacteria 2605
89 Ga0081539_10069396 3300005985 Bacteria 1897
90 Ga0070716_100171969 3300006173 Bacteria 1414
91 Ga0070712_100063078 3300006175 Bacteria 2622
92 Ga0070712_100084157 3300006175 Bacteria 2312
93 Ga0097621_100016274 3300006237 Bacteria 5617
94 Ga0097621_100087978 3300006237 Bacteria 2595
95 Ga0068871_100012815 3300006358 Bacteria 6205
96 Ga0068871_100014702 3300006358 Bacteria 5840
97 Ga0075428_100000030 3300006844 Bacteria 119551
98 Ga0075428_100329917 3300006844 Bacteria 1639
99 Ga0075431_100047145 3300006847 Bacteria 4443
100 Ga0075431_100056677 3300006847 Bacteria 4041
101 Ga0068865_100150991 3300006881 Bacteria 1763
102 Ga0075436_100025600 3300006914 Bacteria 4061
103 Ga0097620_100044112 3300006931 Bacteria 4481
104 Ga0075435_100064548 3300007076 Bacteria 2975
105 Ga0111539_10000015 3300009094 Bacteria 296576
106 Ga0111539_10232874 3300009094 Bacteria 2145
107 Ga0105245_10132039 3300009098 Bacteria 2343
108 Ga0105242_10021731 3300009176 Bacteria 5041
109 Ga0105242_10035279 3300009176 Bacteria 4011
110 Ga0105249_10008457 3300009553 Bacteria 8967
111 Ga0099796_10059085 3300010159 Bacteria 1353
112 Ga0157374_10019053 3300013296 Bacteria 6071
113 Ga0157374_10037976 3300013296 Bacteria 4424
114 Ga0157374_10174712 3300013296 Bacteria 2097
115 Ga0157378_10023562 3300013297 Bacteria 5415
116 Ga0157378_10196823 3300013297 Bacteria 1904
117 Ga0157378_10251399 3300013297 Bacteria 1692
118 Ga0163162_10062038 3300013306 Bacteria 3778
119 Ga0163162_10102470 3300013306 Bacteria 2956
120 Ga0157372_10027233 3300013307 Bacteria 6223
121 Ga0157375_10012510 3300013308 Bacteria 7532
122 Ga0157375_10014922 3300013308 Bacteria 6945
123 Ga0157375_10162724 3300013308 Bacteria 2374
124 Ga0157380_10444078 3300014326 Bacteria 1244
125 Ga0157379_10168674 3300014968 Bacteria 1976
126 Ga0157376_10024057 3300014969 Bacteria 4777
127 Ga0163161_10112508 3300017792 Bacteria 2037
128 Ga0163161_10281642 3300017792 Bacteria 1304
129 Ga0207666_1001718 3300025271 Bacteria 2606
130 Ga0207697_10000444 3300025315 Bacteria 23320
131 Ga0207697_10001315 3300025315 Bacteria 13657
132 Ga0207697_10002777 3300025315 Bacteria 8932
133 Ga0207688_10006996 3300025901 Bacteria 6136
134 Ga0207688_10082480 3300025901 Bacteria 1838
135 Ga0207680_10091761 3300025903 Bacteria 1933
136 Ga0207647_10118018 3300025904 Bacteria 1565
137 Ga0207645_10003356 3300025907 Bacteria 12204
138 Ga0207645_10011241 3300025907 Bacteria 6122
139 Ga0207645_10016720 3300025907 Bacteria 4850
140 Ga0207684_10024650 3300025910 Bacteria 5129
141 Ga0207684_10044580 3300025910 Bacteria 3761
142 Ga0207684_10062573 3300025910 Unclassified 3160
143 Ga0207707_10086466 3300025912 Bacteria 2740
144 Ga0207693_10014814 3300025915 Bacteria 6264
145 Ga0207693_10160732 3300025915 Bacteria 1767
146 Ga0207663_10004995 3300025916 Bacteria 6650
147 Ga0207662_10002236 3300025918 Bacteria 9656
148 Ga0207646_10000115 3300025922 Bacteria 110424
149 Ga0207646_10000582 3300025922 Bacteria 47813
150 Ga0207646_10002304 3300025922 Bacteria 22665
151 Ga0207646_10012086 3300025922 Bacteria 8311
152 Ga0207646_10162159 3300025922 Bacteria 2018
153 Ga0207646_10239220 3300025922 Bacteria 1640
154 Ga0207681_10047377 3300025923 Bacteria 2895
155 Ga0207681_10063764 3300025923 Bacteria 2542
156 Ga0207650_10156359 3300025925 Bacteria 1803
157 Ga0207659_10007627 3300025926 Bacteria 6674
158 Ga0207659_10032999 3300025926 Bacteria 3558
159 Ga0207659_10063566 3300025926 Bacteria 2668
160 Ga0207659_10094760 3300025926 Bacteria 2237
161 Ga0207664_10084943 3300025929 Bacteria 2582
162 Ga0207644_10079086 3300025931 Bacteria 2425
163 Ga0207644_10207684 3300025931 Bacteria 1547
164 Ga0207690_10108872 3300025932 Bacteria 1992
165 Ga0207706_10059059 3300025933 Bacteria 3378
166 Ga0207706_10148304 3300025933 Bacteria 2064
167 Ga0207686_10010568 3300025934 Bacteria 5030
168 Ga0207686_10018898 3300025934 Bacteria 3909
169 Ga0207704_10282393 3300025938 Bacteria 1263
170 Ga0207691_10001851 3300025940 Bacteria 20664
171 Ga0207691_10112574 3300025940 Bacteria 2419
172 Ga0207651_10408421 3300025960 Bacteria 1156
173 Ga0207712_10080489 3300025961 Bacteria 2370
174 Ga0207712_10313761 3300025961 Bacteria 1291
175 Ga0207658_10015218 3300025986 Bacteria 5277
176 Ga0207677_10021269 3300026023 Bacteria 3960
177 Ga0207677_10039394 3300026023 Bacteria 3107
178 Ga0207702_10131810 3300026078 Bacteria 2250
179 Ga0207641_10082929 3300026088 Bacteria 2787
180 Ga0207648_10042894 3300026089 Bacteria 3972
181 Ga0207675_100207556 3300026118 Bacteria 1883
182 Ga0207683_10005698 3300026121 Bacteria 10687
183 Ga0207683_10096105 3300026121 Bacteria 2642
184 Ga0209998_10000056 3300027717 Bacteria 46718
185 Ga0209974_10000780 3300027876 Bacteria 10855
186 Ga0207428_10000048 3300027907 Bacteria 180760
187 Ga0268265_10403049 3300028380 Bacteria 1265
188 Ga0265318_10015475 3300028577 Bacteria 3172
189 Ga0307513_10123974 3300031456 Bacteria 2544
190 Ga0307412_10259966 3300031911 Bacteria 1353
191 Ga0307416_100064613 3300032002 Bacteria 3003
192 Ga0307411_10168674 3300032005 Bacteria 1648
193 Ga0373924_0083905 3300035410 Bacteria 1358
194 Ga0373931_0179836 3300035691 Bacteria 1252
195 Ga0373927_0305619 3300035695 Bacteria 1047
196 Ga0373947_0085206 3300035725 Bacteria 1962
197 Ga0373937_0146965 3300036401 Bacteria 2207
198 Ga0436364_0301757 3300037853 Bacteria 1183
199 Ga0395901_0503783 3300038443 Bacteria 1232
200 Ga0400491_00164 3300038727 Bacteria 3593
201 Ga0400485_02430 3300038735 Bacteria 23110
202 Ga0400485_17922 3300038735 Bacteria 5284
203 Ga0400486_04280 3300038742 Bacteria 19596
204 Ga0400486_28783 3300038742 Bacteria 12505
205 Ga0400489_32651 3300039093 Bacteria 16246
206 Ga0400487_24394 3300039110 Bacteria 2368
207 Ga0400487_51139 3300039110 Bacteria 12992
208 Ga0439441_000108 3300042001 Bacteria 6766
209 Ga0450920_017150 3300042122 Bacteria 1383
210 Ga0450910_001873 3300042147 Bacteria 2718
211 Ga0451576_0016939 3300045051 Bacteria 8027
212 Ga0466967_0012405 3300045976 Bacteria 6515
213 Ga0495630_0282080 3300046517 Bacteria 1269
214 Ga0495652_0018871 3300046529 Bacteria 6147
215 Ga0495599_0105079 3300046678 Bacteria 1759
216 Ga0495675_0200711 3300047444 Bacteria 1214
217 Ga0496100_0069307 3300048903 Bacteria 2348
218 Ga0496101_0005955 3300048904 Bacteria 7813
219 Ga0496102_0328546 3300048905 Bacteria 1440
220 Ga0496103_0099010 3300048906 Bacteria 1844
221 Ga0496104_0027328 3300048907 Bacteria 5280
222 Ga0496104_0540815 3300048907 Bacteria 1076
223 Ga0496105_0140501 3300048908 Bacteria 1988
224 Ga0496106_0010032 3300048909 Bacteria 6996
225 Ga0496107_0020636 3300048910 Bacteria 4655
226 Ga0496107_0187328 3300048910 Bacteria 1537
227 Ga0496108_0125017 3300048911 Bacteria 2207
228 Ga0496108_0244713 3300048911 Bacteria 1560
229 Ga0496112_0009095 3300048915 Bacteria 8927
230 Ga0496112_0143023 3300048915 Bacteria 2361
231 Ga0496112_0201042 3300048915 Bacteria 1952
232 Ga0496113_0103861 3300048916 Bacteria 2204
233 Ga0496115_0001208 3300048918 Bacteria 18530
234 Ga0496115_0021789 3300048918 Bacteria 4953
235 Ga0496115_0203942 3300048918 Bacteria 1633
236 Ga0501031_0006707 3300049568 Bacteria 7510
237 Ga0501031_0016157 3300049568 Bacteria 4848
238 Ga0501031_0023914 3300049568 Bacteria 3983
239 Ga0501031_0037072 3300049568 Bacteria 3181
240 Ga0501031_0145294 3300049568 Bacteria 1550
241 Ga0501032_0123128 3300049569 Bacteria 1714
242 Ga0501032_0168863 3300049569 Bacteria 1435
243 Ga0501033_0070994 3300049570 Bacteria 2558
244 Ga0501034_0482394 3300049571 Bacteria 1155
245 Ga0501036_0016395 3300049572 Bacteria 6189
246 Ga0501036_0053201 3300049572 Bacteria 3429
247 Ga0501038_0023697 3300049574 Bacteria 5485
248 Ga0501038_0049846 3300049574 Bacteria 3619
249 Ga0501038_0138805 3300049574 Bacteria 1990
250 Ga0501039_0008142 3300049575 Bacteria 7987
251 Ga0501039_0018532 3300049575 Bacteria 5344
252 Ga0501040_0012860 3300049576 Bacteria 5497
253 Ga0501041_0006137 3300049577 Bacteria 7024
254 Ga0501041_0027641 3300049577 Bacteria 3419
255 Ga0501042_0200635 3300049578 Bacteria 1438
256 Ga0501043_0083886 3300049579 Bacteria 2505
257 Ga0501046_0009664 3300049580 Bacteria 8316
258 Ga0501046_0017629 3300049580 Bacteria 5955
259 Ga0501048_0004985 3300049582 Bacteria 10127
260 Ga0501048_0006573 3300049582 Bacteria 8836
261 Ga0501067_0020182 3300049583 Bacteria 3686
262 Ga0501068_0022467 3300049584 Bacteria 3689
263 Ga0501069_0082491 3300049585 Bacteria 1812
264 Ga0501069_0096748 3300049585 Bacteria 1673
265 Ga0501070_0115111 3300049586 Bacteria 2221
266 Ga0501070_0122632 3300049586 Bacteria 2148
267 Ga0501071_0000764 3300049587 Bacteria 17069
268 Ga0501071_0000898 3300049587 Bacteria 16081
269 Ga0501071_0006438 3300049587 Bacteria 7619
270 Ga0501071_0033043 3300049587 Bacteria 3676
271 Ga0501072_0016701 3300049588 Bacteria 5639
272 Ga0501072_0019934 3300049588 Bacteria 5190
273 Ga0501072_0028091 3300049588 Bacteria 4392
274 Ga0501072_0201236 3300049588 Bacteria 1588
275 Ga0501073_0174682 3300049589 Bacteria 1487
276 Ga0501074_0015761 3300049590 Bacteria 5495
277 Ga0501074_0029747 3300049590 Bacteria 3957
278 Ga0501074_0039038 3300049590 Bacteria 3439
279 Ga0501074_0041266 3300049590 Bacteria 3341
280 Ga0501074_0068567 3300049590 Bacteria 2550
281 Ga0501074_0143794 3300049590 Bacteria 1706
282 Ga0501075_0004187 3300049591 Bacteria 9739
283 Ga0501075_0017843 3300049591 Bacteria 5127
284 Ga0501075_0038709 3300049591 Bacteria 3566
285 Ga0501075_0050462 3300049591 Bacteria 3127
286 Ga0501075_0069462 3300049591 Bacteria 2662
287 Ga0501076_0001691 3300049592 Bacteria 14888
288 Ga0501076_0006365 3300049592 Bacteria 8561
289 Ga0501076_0013526 3300049592 Bacteria 6118
290 Ga0501076_0013868 3300049592 Bacteria 6052
291 Ga0501076_0177455 3300049592 Bacteria 1736
292 Ga0501076_0247987 3300049592 Bacteria 1457
293 Ga0501077_0028846 3300049593 Bacteria 3527
294 Ga0501077_0032789 3300049593 Bacteria 3308
295 Ga0501077_0219653 3300049593 Bacteria 1208
296 Ga0501079_0009089 3300049741 Bacteria 7524
297 Ga0501079_0019756 3300049741 Bacteria 5147
298 Ga0501079_0251110 3300049741 Bacteria 1382
299 Ga0501080_0024097 3300049742 Bacteria 5642
300 Ga0501080_0051386 3300049742 Bacteria 3835
301 Ga0501080_0080948 3300049742 Bacteria 3018
302 Ga0501080_0095769 3300049742 Bacteria 2756
303 Ga0501080_0096149 3300049742 Bacteria 2750
304 Ga0501081_0009550 3300049743 Bacteria 6325
305 Ga0501081_0042784 3300049743 Bacteria 3105
306 Ga0501081_0055037 3300049743 Bacteria 2749
307 Ga0501081_0101599 3300049743 Bacteria 2033
308 Ga0501035_0038706 3300049822 Bacteria 4317
309 Ga0501035_0048047 3300049822 Bacteria 3828
310 Ga0501045_0004021 3300049824 Bacteria 10130
311 Ga0501045_0036049 3300049824 Bacteria 3591
312 Ga0501045_0195592 3300049824 Bacteria 1507
313 nmdc:mga09592_410427_c1 3300050508 Bacteria 1170
314 nmdc:mga06r32_29459_c1 3300050510 Bacteria 4056
315 nmdc:mga08y16_354108_c1 3300050511 Bacteria 1507
316 nmdc:mga08y16_8_c1 3300050511 Bacteria 571177
317 Ga0495619_0191659 3300053085 Bacteria 1415
318 Ga0501084_0005908 3300054114 Bacteria 10080
319 Ga0501084_0026542 3300054114 Bacteria 4834
320 Ga0501084_0031849 3300054114 Bacteria 4409
321 Ga0501084_0061060 3300054114 Bacteria 3155
322 Ga0501084_0104344 3300054114 Bacteria 2381
323 Ga0501082_0008364 3300060353 Bacteria 8924
324 Ga0501082_0018680 3300060353 Bacteria 5972
325 Ga0501082_0052169 3300060353 Bacteria 3525
326 Ga0501082_0090168 3300060353 Bacteria 2647
327 Ga0501082_0217080 3300060353 Bacteria 1664
328 Ga0530510_0008070 3300061734 Bacteria 7341
329 Ga0530510_0008915 3300061734 Bacteria 7025
330 Ga0530510_0023214 3300061734 Bacteria 4418
331 Ga0530510_0040881 3300061734 Bacteria 3347
332 2511699112 2511231119 Bacteria 4019861
333 2545559563 2545555800 Bacteria 4222588
334 2578930521 2576861599 Bacteria 4217202
335 2651529963 2648501850 Bacteria 3975476
336 2674419971 2671180844 Bacteria 4164150
337 2695627043 2695420354 Bacteria 3922431
338 2717917146 2716884898 Bacteria 3928789
339 2877769869 2877768649 Bacteria 3957164
340 2880170864 2880169592 Bacteria 3900066
341 2904562786 2904560550 Bacteria 4029838
342 2969142316 2969141011 Bacteria 4118468
343 2971894620 2971893375 Bacteria 3929648
344 8022634479 8022630665 Bacteria 3886130
345 8052174284 8052174270 Bacteria 3881265
346 Ga0501040_0043341
347 SwRhRL3b_contig_2655544
348 JGI25406J46586_10000002
349 rootH1_10041413
350 Ga0065715_10024771
351 Ga0065715_10216660
352 Ga0065707_10000716
353 Ga0070676_10002974
354 Ga0070676_10059385
355 Ga0070690_100097060
356 Ga0070670_100017676
357 Ga0070670_100073058
358 Ga0070666_10091874
359 Ga0068868_100018660
360 Ga0068868_100261979
361 Ga0070660_100295955
362 Ga0070689_100057744
363 Ga0070689_100247573
364 Ga0070687_100003431
365 Ga0070668_100073683
366 Ga0070668_100074344
367 Ga0070668_100337568
368 Ga0070669_100021682
369 Ga0070669_100061353
370 Ga0070669_100141126
371 Ga0070669_100150030
372 Ga0070675_100145992
373 Ga0070675_100184080
374 Ga0070675_100215024
375 Ga0070671_100044216
376 Ga0070671_100072088
377 Ga0070673_100014214
378 Ga0070673_100126456
379 Ga0070688_100014538
380 Ga0070688_100198516
381 Ga0070667_100014973
382 Ga0070667_100056954
383 Ga0070703_10079536
384 Ga0070714_100247201
385 Ga0070713_100368857
386 Ga0070701_10082047
387 Ga0070711_100043680
388 Ga0070711_100384668
389 Ga0070705_100044678
390 Ga0070708_100042551
391 Ga0070708_100085533
392 Ga0070708_100118433
393 Ga0070708_100280063
394 Ga0070678_100228972
395 Ga0070678_100441330
396 Ga0070662_100002545
397 Ga0068867_100025031
398 Ga0070685_10091390
399 Ga0070706_100011843
400 Ga0070706_100022798
401 Ga0070706_100030016
402 Ga0070706_100036658
403 Ga0070706_100069764
404 Ga0070706_100074206
405 Ga0070706_100212524
406 Ga0070706_100425064
407 Ga0070707_100000312
408 Ga0070707_100002233
409 Ga0070707_100004497
410 Ga0070707_100042290
411 Ga0070707_100111129
412 Ga0070698_100005998
413 Ga0070698_100030828
414 Ga0070698_100183001
415 Ga0070699_100053259
416 Ga0070679_100148009
417 Ga0070697_100001172
418 Ga0070697_100077350
419 Ga0070697_100096079
420 Ga0070697_100465473
421 Ga0070695_100043756
422 Ga0070696_100042099
423 Ga0070665_100069510
424 Ga0070664_100071215
425 Ga0070664_100155046
426 Ga0068856_100090546
427 Ga0068859_100044114
428 Ga0068861_100304404
429 Ga0068863_100518188
430 Ga0068858_100077102
431 Ga0068860_100202463
432 Ga0068862_100005129
433 Ga0068862_100094705
434 Ga0081539_10069396
435 Ga0070716_100171969
436 Ga0070712_100063078
437 Ga0070712_100084157
438 Ga0097621_100016274
439 Ga0097621_100087978
440 Ga0068871_100012815
441 Ga0068871_100014702
442 Ga0075428_100000030
443 Ga0075428_100329917
444 Ga0075431_100047145
445 Ga0075431_100056677
446 Ga0068865_100150991
447 Ga0075436_100025600
448 Ga0097620_100044112
449 Ga0075435_100064548
450 Ga0111539_10000015
451 Ga0111539_10232874
452 Ga0105245_10132039
453 Ga0105242_10021731
454 Ga0105242_10035279
455 Ga0105249_10008457
456 Ga0099796_10059085
457 Ga0157374_10019053
458 Ga0157374_10037976
459 Ga0157374_10174712
460 Ga0157378_10023562
461 Ga0157378_10196823
462 Ga0157378_10251399
463 Ga0163162_10062038
464 Ga0163162_10102470
465 Ga0157372_10027233
466 Ga0157375_10012510
467 Ga0157375_10014922
468 Ga0157375_10162724
469 Ga0157380_10444078
470 Ga0157379_10168674
471 Ga0157376_10024057
472 Ga0163161_10112508
473 Ga0163161_10281642
474 Ga0207666_1001718
475 Ga0207697_10000444
476 Ga0207697_10001315
477 Ga0207697_10002777
478 Ga0207688_10006996
479 Ga0207688_10082480
480 Ga0207680_10091761
481 Ga0207647_10118018
482 Ga0207645_10003356
483 Ga0207645_10011241
484 Ga0207645_10016720
485 Ga0207684_10024650
486 Ga0207684_10044580
487 Ga0207684_10062573
488 Ga0207707_10086466
489 Ga0207693_10014814
490 Ga0207693_10160732
491 Ga0207663_10004995
492 Ga0207662_10002236
493 Ga0207646_10000115
494 Ga0207646_10000582
495 Ga0207646_10002304
496 Ga0207646_10012086
497 Ga0207646_10162159
498 Ga0207646_10239220
499 Ga0207681_10047377
500 Ga0207681_10063764
501 Ga0207650_10156359
502 Ga0207659_10007627
503 Ga0207659_10032999
504 Ga0207659_10063566
505 Ga0207659_10094760
506 Ga0207664_10084943
507 Ga0207644_10079086
508 Ga0207644_10207684
509 Ga0207690_10108872
510 Ga0207706_10059059
511 Ga0207706_10148304
512 Ga0207686_10010568
513 Ga0207686_10018898
514 Ga0207704_10282393
515 Ga0207691_10001851
516 Ga0207691_10112574
517 Ga0207651_10408421
518 Ga0207712_10080489
519 Ga0207712_10313761
520 Ga0207658_10015218
521 Ga0207677_10021269
522 Ga0207677_10039394
523 Ga0207702_10131810
524 Ga0207641_10082929
525 Ga0207648_10042894
526 Ga0207675_100207556
527 Ga0207683_10005698
528 Ga0207683_10096105
529 Ga0209998_10000056
530 Ga0209974_10000780
531 Ga0207428_10000048
532 Ga0268265_10403049
533 Ga0265318_10015475
534 Ga0307513_10123974
535 Ga0307412_10259966
536 Ga0307416_100064613
537 Ga0307411_10168674
538 Ga0373924_0083905
539 Ga0373931_0179836
540 Ga0373927_0305619
541 Ga0373947_0085206
542 Ga0373937_0146965
543 Ga0436364_0301757
544 Ga0395901_0503783
545 Ga0400491_00164
546 Ga0400485_02430
547 Ga0400485_17922
548 Ga0400486_04280
549 Ga0400486_28783
550 Ga0400489_32651
551 Ga0400487_24394
552 Ga0400487_51139
553 Ga0439441_000108
554 Ga0450920_017150
555 Ga0450910_001873
556 Ga0451576_0016939
557 Ga0466967_0012405
558 Ga0495630_0282080
559 Ga0495652_0018871
560 Ga0495599_0105079
561 Ga0495675_0200711
562 Ga0496100_0069307
563 Ga0496101_0005955
564 Ga0496102_0328546
565 Ga0496103_0099010
566 Ga0496104_0027328
567 Ga0496104_0540815
568 Ga0496105_0140501
569 Ga0496106_0010032
570 Ga0496107_0020636
571 Ga0496107_0187328
572 Ga0496108_0125017
573 Ga0496108_0244713
574 Ga0496112_0009095
575 Ga0496112_0143023
576 Ga0496112_0201042
577 Ga0496113_0103861
578 Ga0496115_0001208
579 Ga0496115_0021789
580 Ga0496115_0203942
581 Ga0501031_0006707
582 Ga0501031_0016157
583 Ga0501031_0023914
584 Ga0501031_0037072
585 Ga0501031_0145294
586 Ga0501032_0123128
587 Ga0501032_0168863
588 Ga0501033_0070994
589 Ga0501034_0482394
590 Ga0501036_0016395
591 Ga0501036_0053201
592 Ga0501038_0023697
593 Ga0501038_0049846
594 Ga0501038_0138805
595 Ga0501039_0008142
596 Ga0501039_0018532
597 Ga0501040_0012860
598 Ga0501041_0006137
599 Ga0501041_0027641
600 Ga0501042_0200635
601 Ga0501043_0083886
602 Ga0501046_0009664
603 Ga0501046_0017629
604 Ga0501048_0004985
605 Ga0501048_0006573
606 Ga0501067_0020182
607 Ga0501068_0022467
608 Ga0501069_0082491
609 Ga0501069_0096748
610 Ga0501070_0115111
611 Ga0501070_0122632
612 Ga0501071_0000764
613 Ga0501071_0000898
614 Ga0501071_0006438
615 Ga0501071_0033043
616 Ga0501072_0016701
617 Ga0501072_0019934
618 Ga0501072_0028091
619 Ga0501072_0201236
620 Ga0501073_0174682
621 Ga0501074_0015761
622 Ga0501074_0029747
623 Ga0501074_0039038
624 Ga0501074_0041266
625 Ga0501074_0068567
626 Ga0501074_0143794
627 Ga0501075_0004187
628 Ga0501075_0017843
629 Ga0501075_0038709
630 Ga0501075_0050462
631 Ga0501075_0069462
632 Ga0501076_0001691
633 Ga0501076_0006365
634 Ga0501076_0013526
635 Ga0501076_0013868
636 Ga0501076_0177455
637 Ga0501076_0247987
638 Ga0501077_0028846
639 Ga0501077_0032789
640 Ga0501077_0219653
641 Ga0501079_0009089
642 Ga0501079_0019756
643 Ga0501079_0251110
644 Ga0501080_0024097
645 Ga0501080_0051386
646 Ga0501080_0080948
647 Ga0501080_0095769
648 Ga0501080_0096149
649 Ga0501081_0009550
650 Ga0501081_0042784
651 Ga0501081_0055037
652 Ga0501081_0101599
653 Ga0501035_0038706
654 Ga0501035_0048047
655 Ga0501045_0004021
656 Ga0501045_0036049
657 Ga0501045_0195592
658 nmdc:mga09592_410427_c1
659 nmdc:mga06r32_29459_c1
660 nmdc:mga08y16_354108_c1
661 nmdc:mga08y16_8_c1
662 Ga0495619_0191659
663 Ga0501084_0005908
664 Ga0501084_0026542
665 Ga0501084_0031849
666 Ga0501084_0061060
667 Ga0501084_0104344
668 Ga0501082_0008364
669 Ga0501082_0018680
670 Ga0501082_0052169
671 Ga0501082_0090168
672 Ga0501082_0217080
673 Ga0530510_0008070
674 Ga0530510_0008915
675 Ga0530510_0023214
676 Ga0530510_0040881
677 2511699112
678 2545559563
679 2578930521
680 2651529963
681 2674419971
682 2695627043
683 2717917146
684 2877769869
685 2880170864
686 2904562786
687 2969142316
688 2971894620
689 8022634479
690 8052174284

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

3

251

0.95

PF04321

RmlD_sub_bind

RmlD substrate binding domain

1

178

0.89

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

4

149

0.84

PF05368

NmrA

NmrA-like family

3

129

0.83

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

4

315

0.82

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

3

176

0.77

PF13460

NAD_binding_10

NAD(P)H-binding

7

154

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
2udp-assembly1.cif.gz_A udp-galactose 4-epimerase complexed with udp-phenol 0.965 1 319
5gy7-assembly1.cif.gz_B x-ray structure of h243i mutant of udp-galactose 4-epimerase from e.coli:evidence for existence of open and closed active site during catalysis. 0.9629 1 319
1kvu-assembly1.cif.gz_A-2 udp-galactose 4-epimerase complexed with udp-phenol 0.9601 1 319
1a9z-assembly1.cif.gz_A-2 udp-galactose 4-epimerase mutant s124a/y149f complexed with udp-galactose 0.9598 1 319
1a9y-assembly1.cif.gz_A-2 udp-galactose 4-epimerase mutant s124a/y149f complexed with udp-glucose 0.9598 1 319
ID Description Score Start End Superfamily
4j36B00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9621 2 32 3.50.50.60
af_A0A1D6K005_288_418_3.90.25.10 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9586 194 319 3.90.25.10
4wokA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9553 2 248 3.40.50.720
af_A0A1D6PCE2_262_419_3.90.25.10 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9473 177 319 3.90.25.10
af_K7VJC9_94_197_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9473 2 54 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A838RWF2-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.9934 1 150 GO:0016853
GO:0033499
AF-A0A2V6GIQ0-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.993 1 115 GO:0016853
GO:0033499
AF-K1TAH4-F1-model_v4 UDP-glucose 4-epimerase 0.9897 1 167 GO:0016853
GO:0033499
AF-A0A4Q6CVY6-F1-model_v4 deleted 0.9895 1 185
AF-G6C3G9-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.989 1 176 GO:0016853
GO:0033499

Map