F416196

General Info

Members Datasets Scaffolds Average Seq Length
344 266 688 627

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8054913762|8054916506
Length 661
Sequence IETLEFQAEARQLLQLMVHSIYSDKDIFLRELISNASDALDKLRLESLVDKDLQADTSDLHIDLEVDRGARTLTVRDNGIGMSRDDVVQLIGTIAKSGTAEVLRKAKEAKEAKDAAASPELIGQFGVGFYSTFMVADRVTLLTRRAGASGGTRWESSGEGTYVIEEIDDAPQGTAVTLHLKPEDTEDHLFDYTAAWKIREIVKKYSDFIAWPIRMATERTAQAAADAADAATEAAATDEAGTNEAGAATTEVQTLNSMKALWARPRDEVDQAEYHELYRHLSHDWTDPLETIHMKGEGLFEYEALLFIPSHAPLDLFAQDGKRGIQLYVKRVFIMDDCQALMPNYLRFVKGVVDAHDLSLNISREILQQDRQIQLVRRRLVKKVLSTVRHLQTDDAERYRTFWKEFGPVVKEGLLDDVDNQEAILDIVSVASTRDPEQTTTLREYVDRMKDGQDDIYYMTGESRLMVEKSPHMEAFQARGYEVLILTDPVDEVWVERVARFDGKPLRSIAKGQVDLGTADEKDSTEPEREQQKKDFSGLLTWLARTLQEEVKEVRLSSRLTTSPACLVGDTHDITPTLEKMYRAMGQNVPHPKRILELNPTHPLVSGLRKAHEQQDADAASDVLGETAELLYGMALLAEGGELADPSRFTRILADRLANTL

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
42 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
63 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
64 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
65 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
66 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
69 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
70 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
71 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
72 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
73 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
78 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
79 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
80 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
85 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
86 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
87 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
92 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
93 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
94 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
95 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
96 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
97 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
98 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
99 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
100 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
101 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
102 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
103 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
104 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
105 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
106 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
109 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
110 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
111 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
112 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
113 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
123 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
150 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
153 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
154 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
155 2501939600 Micromonospora sp. L5 Isolate Unclassified
156 2508501039 Frankia saprophytica CN3 Isolate Nodule
157 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
158 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
159 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
160 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
161 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
162 2517572101 Frankia sp. DC12 Isolate Nodule
163 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
164 2527291627 Frankia casuarinae Thr Isolate Nodule
165 2527291629 Frankia sp. BMG5.23 Isolate Nodule
166 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
167 2558860280 Kutzneria sp. 744 Isolate Unclassified
168 2576861822 Frankia sp. CeD Isolate Nodule
169 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
170 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
171 2619618881 Frankia sp. ACN1ag Isolate Unclassified
172 2619619003 Frankia sp. CpI1-P Isolate Nodule
173 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
174 2626541554 Frankia sp. AvcI.1 Isolate Nodule
175 2643221548 Streptomyces sp. Root55 Isolate Unclassified
176 2643221578 Streptomyces sp. Root63 Isolate Unclassified
177 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
178 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
179 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
180 2684623036 Frankia sp. CgIM4 Isolate Nodule
181 2687453737 Frankia sp. BMG5.36 Isolate Nodule
182 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
183 2710264753 Frankia sp. KB5 Isolate Nodule
184 2734482000 Kineosporia rhizophila JCM 9960 Isolate Unclassified
185 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
186 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
187 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
188 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
189 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
190 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
191 2773857924 Frankia sp. CgIS1 Isolate Nodule
192 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
193 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
194 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
195 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
196 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
197 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
198 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
199 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
200 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
201 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
202 2855683550 Micromonospora sp. RP3T Isolate Unclassified
203 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
204 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
205 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
206 2858868258 Micromonospora sp. MH33 Isolate Unclassified
207 2858882152 Micromonospora noduli MED15 Isolate Nodule
208 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
209 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
210 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
211 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
212 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
213 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
214 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
215 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
216 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
217 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
218 2867369537 Streptomyces sp. Z26 Isolate Unclassified
219 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
220 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
221 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
222 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
223 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
224 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
225 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
226 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
227 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
228 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
229 2902582711 Micromonospora sp. AP08 Isolate Unclassified
230 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
231 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
232 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
233 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
234 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
235 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
236 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
237 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
238 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
239 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
240 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
241 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
242 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
243 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
244 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
245 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
246 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
247 637000116 Frankia casuarinae CcI3 Isolate Nodule
248 649633069 Micromonospora sp. L5 Isolate Unclassified
249 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
250 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
251 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
252 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
253 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
254 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
255 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
256 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
257 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
258 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
259 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
260 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
261 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
262 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
263 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
264 8054920844 Frankia tisae Agncl-8 Isolate Nodule
265 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule
266 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 65.7
Metatranscriptomes 1.45
Isolates 32.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.45
Nodule 6.98
Rhizoplane 4.65
Rhizosphere 61.05
Stem 0
Stem Tuber 0
Unclassified 0.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000632 3300003203 Bacteria 16449
2 rootL2_10006130 3300003322 Bacteria 16334
3 Ga0070658_10016391 3300005327 Bacteria 5929
4 Ga0070683_100001990 3300005329 Bacteria 16022
5 Ga0070683_100061864 3300005329 Bacteria 3480
6 Ga0068869_100004365 3300005334 Bacteria 8780
7 Ga0068868_100016238 3300005338 Bacteria 5525
8 Ga0070661_100034681 3300005344 Bacteria 3660
9 Ga0070692_10007876 3300005345 Bacteria 4723
10 Ga0070668_100000356 3300005347 Bacteria 30284
11 Ga0070668_100001635 3300005347 Bacteria 16234
12 Ga0070675_100001751 3300005354 Bacteria 16013
13 Ga0070659_100040092 3300005366 Bacteria 3659
14 Ga0070714_100006254 3300005435 Bacteria 9172
15 Ga0070663_100005612 3300005455 Bacteria 7470
16 Ga0070663_100010992 3300005455 Bacteria 5662
17 Ga0070684_100010104 3300005535 Bacteria 7465
18 Ga0068853_100015782 3300005539 Bacteria 6203
19 Ga0068857_100009227 3300005577 Bacteria 8557
20 Ga0068852_100012012 3300005616 Bacteria 6551
21 Ga0068859_100000027 3300005617 Bacteria 182371
22 Ga0068859_100047151 3300005617 Bacteria 4329
23 Ga0068863_100000325 3300005841 Bacteria 48321
24 Ga0068858_100000054 3300005842 Bacteria 119686
25 Ga0068862_100000186 3300005844 Bacteria 68544
26 Ga0081539_10000204 3300005985 Bacteria 137351
27 Ga0081539_10002033 3300005985 Bacteria 30478
28 Ga0081539_10003549 3300005985 Bacteria 18946
29 Ga0081539_10003944 3300005985 Bacteria 17186
30 Ga0081539_10008551 3300005985 Bacteria 8860
31 Ga0081539_10009830 3300005985 Bacteria 7900
32 Ga0075428_100001746 3300006844 Bacteria 23195
33 Ga0075428_100059984 3300006844 Bacteria 4165
34 Ga0075430_100009107 3300006846 Bacteria 8386
35 Ga0075430_100023092 3300006846 Bacteria 5290
36 Ga0075429_100002961 3300006880 Bacteria 14409
37 Ga0075429_100009499 3300006880 Bacteria 8439
38 Ga0097620_100000027 3300006931 Bacteria 182371
39 Ga0097620_100047150 3300006931 Bacteria 4329
40 Ga0111539_10021722 3300009094 Bacteria 7892
41 Ga0105245_10012786 3300009098 Bacteria 7311
42 Ga0105247_10000032 3300009101 Bacteria 185415
43 Ga0114129_10001038 3300009147 Bacteria 36311
44 Ga0114129_10091255 3300009147 Bacteria 4221
45 Ga0105248_10000111 3300009177 Bacteria 91627
46 Ga0105248_10002127 3300009177 Bacteria 21925
47 Ga0105248_10158067 3300009177 Unclassified 2558
48 Ga0105249_10003307 3300009553 Bacteria 13967
49 Ga0157369_10015483 3300013105 Bacteria 8594
50 Ga0157372_10077824 3300013307 Bacteria 3747
51 Ga0157375_10089793 3300013308 Bacteria 3130
52 Ga0163163_10186048 3300014325 Bacteria 2125
53 Ga0157379_10032762 3300014968 Bacteria 4634
54 Ga0206356_11370282 3300020070 Bacteria 3866
55 Ga0206351_10185450 3300020077 Bacteria 2396
56 Ga0206353_10810440 3300020082 Bacteria 3236
57 Ga0213875_10000534 3300021388 Bacteria 31218
58 Ga0213875_10010834 3300021388 Bacteria 4557
59 Ga0213875_10011557 3300021388 Bacteria 4391
60 Ga0224712_10002697 3300022467 Bacteria 4448
61 Ga0224712_10006737 3300022467 Bacteria 3299
62 Ga0207426_1010794 3300025302 Bacteria 3525
63 Ga0207710_10000077 3300025900 Bacteria 145153
64 Ga0207707_10027054 3300025912 Bacteria 5013
65 Ga0207649_10031588 3300025920 Bacteria 3149
66 Ga0207694_10043347 3300025924 Bacteria 3473
67 Ga0207659_10001816 3300025926 Bacteria 12636
68 Ga0207700_10030007 3300025928 Bacteria 3845
69 Ga0207690_10032200 3300025932 Bacteria 3362
70 Ga0207711_10003975 3300025941 Bacteria 12716
71 Ga0207711_10007150 3300025941 Bacteria 9356
72 Ga0207689_10007170 3300025942 Bacteria 9800
73 Ga0207661_10005345 3300025944 Bacteria 9041
74 Ga0207661_10049579 3300025944 Bacteria 3342
75 Ga0207679_10002252 3300025945 Bacteria 11901
76 Ga0207679_10061310 3300025945 Bacteria 2800
77 Ga0207668_10000913 3300025972 Bacteria 17779
78 Ga0207668_10009159 3300025972 Bacteria 5920
79 Ga0207668_10020328 3300025972 Bacteria 4216
80 Ga0207703_10000002 3300026035 Bacteria 600711
81 Ga0207678_10000069 3300026067 Bacteria 81395
82 Ga0207641_10028496 3300026088 Bacteria 4615
83 Ga0207648_10135489 3300026089 Bacteria 2169
84 Ga0207674_10007963 3300026116 Bacteria 12294
85 Ga0207674_10011841 3300026116 Bacteria 9778
86 Ga0268265_10000206 3300028380 Bacteria 68565
87 Ga0307515_10001123 3300028794 Bacteria 61209
88 Ga0307511_10001470 3300030521 Bacteria 24925
89 Ga0307512_10005353 3300030522 Bacteria 13425
90 Ga0307512_10034118 3300030522 Bacteria 4360
91 Ga0265328_10008757 3300031239 Bacteria 4155
92 Ga0265340_10000364 3300031247 Bacteria 24149
93 Ga0307513_10000419 3300031456 Bacteria 61301
94 Ga0307513_10009023 3300031456 Bacteria 12649
95 Ga0307513_10032667 3300031456 Bacteria 5865
96 Ga0307509_10044512 3300031507 Bacteria 4795
97 Ga0307408_100032784 3300031548 Bacteria 3624
98 Ga0307508_10000503 3300031616 Bacteria 46715
99 Ga0307508_10003442 3300031616 Bacteria 16005
100 Ga0307508_10015870 3300031616 Bacteria 6863
101 Ga0307508_10092785 3300031616 Bacteria 2609
102 Ga0307508_10102319 3300031616 Bacteria 2461
103 Ga0316575_10004260 3300031665 Bacteria 5023
104 Ga0316576_10020753 3300031727 Bacteria 4532
105 Ga0307516_10001643 3300031730 Bacteria 30755
106 Ga0307516_10006829 3300031730 Bacteria 13304
107 Ga0307516_10081816 3300031730 Bacteria 3071
108 Ga0307405_10001807 3300031731 Bacteria 9155
109 Ga0307518_10000601 3300031838 Bacteria 27469
110 Ga0307410_10003207 3300031852 Bacteria 8155
111 Ga0326468_10000853 3300031889 Bacteria 3032
112 Ga0307406_10010183 3300031901 Bacteria 5297
113 Ga0307407_10000705 3300031903 Bacteria 10887
114 Ga0307412_10023948 3300031911 Bacteria 3764
115 Ga0307416_100000156 3300032002 Bacteria 39237
116 Ga0307411_10052594 3300032005 Bacteria 2664
117 Ga0307415_100000003 3300032126 Bacteria 116928
118 Ga0307507_10005328 3300033179 Bacteria 21258
119 Ga0307507_10025083 3300033179 Bacteria 6474
120 Ga0307507_10035500 3300033179 Bacteria 5121
121 Ga0373951_0000017 3300035091 Bacteria 65961
122 Ga0373942_0000169 3300035207 Bacteria 16119
123 Ga0373942_0001401 3300035207 Bacteria 6221
124 Ga0373935_0080424 3300035692 Bacteria 2117
125 Ga0395900_0140519 3300037418 Bacteria 2473
126 Ga0436364_0572257 3300037853 Bacteria 27437
127 Ga0436364_0583819 3300037853 Bacteria 3617
128 Ga0436364_1068326 3300037853 Bacteria 15501
129 Ga0395901_0024515 3300038443 Bacteria 6193
130 Ga0436361_0103354 3300039447 Bacteria 26052
131 Ga0451791_0717443 3300041451 Bacteria 8401
132 Ga0451793_0509568 3300041452 Bacteria 5492
133 Ga0451797_0934684 3300041453 Bacteria 5412
134 Ga0451841_0862246 3300041498 Bacteria 2206
135 Ga0451853_0364900 3300041512 Bacteria 3936
136 Ga0451853_1977280 3300041512 Bacteria 5476
137 Ga0466969_0001458 3300044656 Bacteria 12723
138 Ga0466969_0007639 3300044656 Bacteria 5746
139 Ga0466966_0001189 3300044684 Bacteria 16712
140 Ga0466966_0007691 3300044684 Bacteria 7139
141 Ga0466966_0011528 3300044684 Bacteria 5864
142 Ga0466966_0013530 3300044684 Bacteria 5400
143 Ga0466966_0047781 3300044684 Bacteria 2728
144 Ga0466961_0003831 3300044693 Bacteria 9413
145 Ga0466961_0006409 3300044693 Bacteria 7474
146 Ga0466961_0015012 3300044693 Bacteria 4973
147 Ga0466961_0033216 3300044693 Bacteria 3316
148 Ga0466963_0002695 3300044694 Bacteria 10005
149 Ga0466963_0012145 3300044694 Bacteria 5265
150 Ga0466971_0025003 3300044719 Bacteria 2667
151 Ga0466968_0000167 3300044735 Bacteria 19994
152 Ga0466970_0002573 3300044765 Bacteria 8753
153 Ga0466957_0000904 3300044842 Bacteria 15182
154 Ga0466959_0002222 3300045049 Bacteria 12360
155 Ga0466959_0012747 3300045049 Bacteria 6081
156 Ga0466959_0014175 3300045049 Bacteria 5786
157 Ga0466959_0024851 3300045049 Bacteria 4437
158 Ga0466959_0079331 3300045049 Bacteria 2367
159 Ga0466958_0000351 3300045836 Bacteria 18505
160 Ga0466967_0002340 3300045976 Bacteria 11725
161 Ga0466967_0020733 3300045976 Bacteria 5321
162 Ga0466967_0137255 3300045976 Bacteria 2275
163 Ga0466967_0208337 3300045976 Bacteria 1854
164 Ga0495650_0008169 3300046471 Bacteria 6155
165 Ga0495585_0007174 3300046492 Bacteria 6844
166 Ga0495594_0027359 3300046499 Bacteria 3073
167 Ga0495640_0015823 3300046533 Bacteria 5661
168 Ga0495604_0002079 3300047317 Bacteria 16141
169 Ga0495604_0003657 3300047317 Bacteria 12254
170 Ga0495686_0027403 3300047472 Bacteria 3720
171 Ga0496101_0065107 3300048904 Bacteria 2657
172 Ga0496102_0042804 3300048905 Bacteria 4105
173 Ga0496104_0011232 3300048907 Bacteria 8015
174 Ga0496104_0064161 3300048907 Bacteria 3485
175 Ga0496108_0000109 3300048911 Bacteria 85533
176 Ga0496108_0012082 3300048911 Bacteria 7022
177 Ga0496109_0009370 3300048912 Bacteria 8340
178 Ga0496110_0005044 3300048913 Bacteria 10318
179 Ga0496111_0000271 3300048914 Bacteria 25178
180 Ga0496114_0000705 3300048917 Bacteria 24945
181 Ga0496114_0015994 3300048917 Bacteria 6038
182 Ga0496119_0011146 3300048922 Bacteria 7487
183 Ga0496119_0017900 3300048922 Bacteria 5306
184 Ga0496120_0001689 3300048923 Bacteria 25331
185 Ga0496121_0000882 3300048924 Bacteria 54258
186 Ga0501031_0006174 3300049568 Bacteria 7822
187 Ga0501031_0015431 3300049568 Bacteria 4960
188 Ga0501031_0023506 3300049568 Bacteria 4017
189 Ga0501032_0002990 3300049569 Bacteria 13115
190 Ga0501032_0008140 3300049569 Bacteria 7644
191 Ga0501033_0001832 3300049570 Bacteria 18521
192 Ga0501034_0096295 3300049571 Bacteria 2956
193 Ga0501036_0072585 3300049572 Bacteria 2909
194 Ga0501036_0075645 3300049572 Bacteria 2847
195 Ga0501037_0001324 3300049573 Bacteria 18177
196 Ga0501037_0002571 3300049573 Bacteria 13101
197 Ga0501037_0024306 3300049573 Bacteria 4481
198 Ga0501037_0036157 3300049573 Bacteria 3640
199 Ga0501038_0012429 3300049574 Bacteria 7783
200 Ga0501038_0044380 3300049574 Bacteria 3862
201 Ga0501041_0001942 3300049577 Bacteria 11608
202 Ga0501042_0039761 3300049578 Bacteria 3343
203 Ga0501042_0041624 3300049578 Bacteria 3268
204 Ga0501042_0051402 3300049578 Bacteria 2939
205 Ga0501043_0004722 3300049579 Bacteria 11046
206 Ga0501043_0033592 3300049579 Bacteria 4036
207 Ga0501043_0057702 3300049579 Bacteria 3047
208 Ga0501046_0009586 3300049580 Bacteria 8354
209 Ga0501046_0142670 3300049580 Bacteria 1811
210 Ga0501047_0000836 3300049581 Bacteria 31772
211 Ga0501048_0002134 3300049582 Bacteria 15067
212 Ga0501071_0003824 3300049587 Bacteria 9468
213 Ga0501072_0005469 3300049588 Bacteria 9672
214 Ga0501073_0037908 3300049589 Bacteria 3421
215 Ga0501083_0075196 3300049744 Bacteria 2244
216 Ga0501035_0011635 3300049822 Bacteria 8157
217 Ga0501035_0063461 3300049822 Bacteria 3285
218 Ga0501044_0004261 3300049823 Bacteria 16048
219 nmdc:mga05p37_307674_c1 3300050507 Bacteria 1880
220 nmdc:mga05p37_9181_c1 3300050507 Bacteria 11690
221 nmdc:mga09592_25782_c1 3300050508 Bacteria 4868
222 nmdc:mga0qj67_2820_c1 3300050509 Bacteria 12463
223 nmdc:mga06r32_191074_c1 3300050510 Bacteria 2035
224 nmdc:mga08y16_3789_c1 3300050511 Bacteria 15747
225 Ga0500594_0004048 3300053118 Bacteria 3227
226 Ga0500568_0001333 3300053139 Bacteria 16176
227 Ga0500616_0003233 3300053153 Bacteria 12626
228 Ga0500616_0006191 3300053153 Bacteria 7898
229 Ga0501082_0039169 3300060353 Bacteria 4089
230 Ga0466962_0000485 3300061719 Bacteria 17229
231 Ga0466962_0002684 3300061719 Bacteria 8470
232 8054916506 8054913762 Bacteria 7713009
233 2501941484 2501939600 Bacteria 6907073
234 2508677773 2508501039 Bacteria 9978592
235 2515497562 2515154088 Bacteria 5526283
236 2515719494 2515154129 Bacteria 5584369
237 2515757302 2515154137 Bacteria 5711575
238 2516083833 2515154202 Bacteria 5471270
239 2516088773 2515154203 Bacteria 5458536
240 2517761943 2517572101 Bacteria 6884336
241 2523386982 2523231044 Bacteria 6434991
242 2528202857 2527291627 Bacteria 5309833
243 2528213235 2527291629 Bacteria 5267418
244 2546947628 2546825537 Bacteria 5389291
245 2559424202 2558860280 Bacteria 11429938
246 2579748385 2576861822 Bacteria 5004595
247 2579858442 2579778521 Bacteria 7624758
248 2586063849 2585427649 Bacteria 9053857
249 2619857609 2619618881 Bacteria 7521104
250 2620354252 2619619003 Bacteria 7619552
251 2623588747 2622736626 Bacteria 7181580
252 2626634934 2626541554 Bacteria 7741902
253 2643763396 2643221548 Bacteria 8053412
254 2643904730 2643221578 Bacteria 9213798
255 2644406004 2643221673 Bacteria 9196637
256 2644463734 2643221682 Bacteria 6743283
257 2676205199 2675902999 Bacteria 9438463
258 2686542165 2684623036 Bacteria 5199090
259 2689964031 2687453737 Bacteria 11203906
260 2689992701 2687453743 Bacteria 8361025
261 2710605543 2710264753 Bacteria 5455564
262 2734968237 2734482000 Bacteria 5525167
263 2739364709 2738543034 Bacteria 6084756
264 2744958334 2744054611 Bacteria 5611514
265 2753075682 2751185734 Bacteria 8863695
266 2753266677 2751185782 Bacteria 11227053
267 2772647389 2772190715 Bacteria 6959372
268 2774849774 2773857921 Bacteria 9435764
269 2774864241 2773857924 Bacteria 5256821
270 2791914096 2791354901 Bacteria 8322202
271 2793980899 2791355406 Bacteria 11364898
272 2795783302 2795385470 Bacteria 8317180
273 2809586902 2808606522 Bacteria 9488490
274 2819698146 2818991463 Bacteria 7948711
275 2819743658 2818991472 Bacteria 10089953
276 2831936121 2831935698 Bacteria 5963223
277 2832006632 2832004796 Bacteria 6538017
278 2855673245 2855670206 Bacteria 7120389
279 2855681042 2855676851 Bacteria 7063653
280 2855685628 2855683550 Bacteria 7134265
281 2856863058 2856858025 Bacteria 7255264
282 2857293563 2857288857 Bacteria 7189066
283 2858851371 2858848962 Bacteria 6963058
284 2858874039 2858868258 Bacteria 7683772
285 2858887623 2858882152 Bacteria 7230291
286 2858892743 2858888857 Bacteria 7060307
287 2858897009 2858895516 Bacteria 7378898
288 2858905988 2858902515 Bacteria 7086037
289 2862705498 2862705112 Bacteria 6563286
290 2866070307 2866065130 Bacteria 6518152
291 2866614693 2866612099 Bacteria 7543886
292 2867306599 2867302475 Bacteria 7087181
293 2867318092 2867312974 Bacteria 7058875
294 2867324281 2867319477 Bacteria 7069771
295 2867346654 2867346516 Bacteria 7608576
296 2867372905 2867369537 Bacteria 6501581
297 2867507575 2867507094 Bacteria 6506033
298 2869053028 2869048445 Bacteria 6875584
299 2869067054 2869061728 Bacteria 7112407
300 2869070189 2869068681 Bacteria 7205615
301 2870725261 2870721527 Bacteria 9689237
302 2870783948 2870782633 Bacteria 9624083
303 2873152876 2873151551 Bacteria 8625867
304 2880491664 2880489317 Bacteria 7096270
305 2880500678 2880495981 Bacteria 7340502
306 2899366423 2899359706 Bacteria 10940472
307 2902583228 2902582711 Bacteria 6187705
308 2904766641 2904765812 Bacteria 5369154
309 2904772810 2904770941 Bacteria 5580202
310 2908811603 2908811453 Bacteria 5478616
311 2912758650 2912757875 Bacteria 7940295
312 2915772157 2915768154 Bacteria 8424322
313 2917738898 2917736166 Bacteria 9690793
314 2919420924 2919420072 Bacteria 5390363
315 2919433318 2919432681 Bacteria 5390474
316 2929222867 2929219909 Bacteria 6984360
317 2929229184 2929226422 Bacteria 7248583
318 2946051773 2946045630 Bacteria 8527308
319 2966602379 2966598605 Bacteria 7676064
320 2990047930 2990044586 Bacteria 6603797
321 2996224975 2996221748 Bacteria 6799777
322 2997607312 2997600082 Bacteria 9896405
323 3006328516 3006321560 Bacteria 8247479
324 3006487545 3006486233 Bacteria 8157040
325 637877571 637000116 Bacteria 5433628
326 649815170 649633069 Bacteria 6962533
327 8003321182 8003314358 Bacteria 10575343
328 8003835998 8003830390 Bacteria 6541657
329 8003860457 8003856774 Bacteria 7675274
330 8003872897 8003870546 Bacteria 7396674
331 8008491080 8008485437 Bacteria 7198341
332 8025530409 8025524527 Bacteria 7197316
333 8047712788 8047710418 Bacteria 11023148
334 8047901829 8047893842 Bacteria 11723082
335 8048130853 8048127548 Bacteria 11053136
336 8048357062 8048356638 Bacteria 11044339
337 8048378765 8048369669 Bacteria 11666822
338 8048387867 8048379754 Bacteria 11877923
339 8054709229 8054704163 Bacteria 7247792
340 8054729077 8054727385 Bacteria 7558670
341 8054738119 8054734606 Bacteria 6947278
342 8054922851 8054920844 Bacteria 7068637
343 8055158161 8055157932 Bacteria 6429399
344 8055412620 8055412473 Bacteria 6257500
345 JGI25406J46586_10000632
346 rootL2_10006130
347 Ga0070658_10016391
348 Ga0070683_100001990
349 Ga0070683_100061864
350 Ga0068869_100004365
351 Ga0068868_100016238
352 Ga0070661_100034681
353 Ga0070692_10007876
354 Ga0070668_100000356
355 Ga0070668_100001635
356 Ga0070675_100001751
357 Ga0070659_100040092
358 Ga0070714_100006254
359 Ga0070663_100005612
360 Ga0070663_100010992
361 Ga0070684_100010104
362 Ga0068853_100015782
363 Ga0068857_100009227
364 Ga0068852_100012012
365 Ga0068859_100000027
366 Ga0068859_100047151
367 Ga0068863_100000325
368 Ga0068858_100000054
369 Ga0068862_100000186
370 Ga0081539_10000204
371 Ga0081539_10002033
372 Ga0081539_10003549
373 Ga0081539_10003944
374 Ga0081539_10008551
375 Ga0081539_10009830
376 Ga0075428_100001746
377 Ga0075428_100059984
378 Ga0075430_100009107
379 Ga0075430_100023092
380 Ga0075429_100002961
381 Ga0075429_100009499
382 Ga0097620_100000027
383 Ga0097620_100047150
384 Ga0111539_10021722
385 Ga0105245_10012786
386 Ga0105247_10000032
387 Ga0114129_10001038
388 Ga0114129_10091255
389 Ga0105248_10000111
390 Ga0105248_10002127
391 Ga0105248_10158067
392 Ga0105249_10003307
393 Ga0157369_10015483
394 Ga0157372_10077824
395 Ga0157375_10089793
396 Ga0163163_10186048
397 Ga0157379_10032762
398 Ga0206356_11370282
399 Ga0206351_10185450
400 Ga0206353_10810440
401 Ga0213875_10000534
402 Ga0213875_10010834
403 Ga0213875_10011557
404 Ga0224712_10002697
405 Ga0224712_10006737
406 Ga0207426_1010794
407 Ga0207710_10000077
408 Ga0207707_10027054
409 Ga0207649_10031588
410 Ga0207694_10043347
411 Ga0207659_10001816
412 Ga0207700_10030007
413 Ga0207690_10032200
414 Ga0207711_10003975
415 Ga0207711_10007150
416 Ga0207689_10007170
417 Ga0207661_10005345
418 Ga0207661_10049579
419 Ga0207679_10002252
420 Ga0207679_10061310
421 Ga0207668_10000913
422 Ga0207668_10009159
423 Ga0207668_10020328
424 Ga0207703_10000002
425 Ga0207678_10000069
426 Ga0207641_10028496
427 Ga0207648_10135489
428 Ga0207674_10007963
429 Ga0207674_10011841
430 Ga0268265_10000206
431 Ga0307515_10001123
432 Ga0307511_10001470
433 Ga0307512_10005353
434 Ga0307512_10034118
435 Ga0265328_10008757
436 Ga0265340_10000364
437 Ga0307513_10000419
438 Ga0307513_10009023
439 Ga0307513_10032667
440 Ga0307509_10044512
441 Ga0307408_100032784
442 Ga0307508_10000503
443 Ga0307508_10003442
444 Ga0307508_10015870
445 Ga0307508_10092785
446 Ga0307508_10102319
447 Ga0316575_10004260
448 Ga0316576_10020753
449 Ga0307516_10001643
450 Ga0307516_10006829
451 Ga0307516_10081816
452 Ga0307405_10001807
453 Ga0307518_10000601
454 Ga0307410_10003207
455 Ga0326468_10000853
456 Ga0307406_10010183
457 Ga0307407_10000705
458 Ga0307412_10023948
459 Ga0307416_100000156
460 Ga0307411_10052594
461 Ga0307415_100000003
462 Ga0307507_10005328
463 Ga0307507_10025083
464 Ga0307507_10035500
465 Ga0373951_0000017
466 Ga0373942_0000169
467 Ga0373942_0001401
468 Ga0373935_0080424
469 Ga0395900_0140519
470 Ga0436364_0572257
471 Ga0436364_0583819
472 Ga0436364_1068326
473 Ga0395901_0024515
474 Ga0436361_0103354
475 Ga0451791_0717443
476 Ga0451793_0509568
477 Ga0451797_0934684
478 Ga0451841_0862246
479 Ga0451853_0364900
480 Ga0451853_1977280
481 Ga0466969_0001458
482 Ga0466969_0007639
483 Ga0466966_0001189
484 Ga0466966_0007691
485 Ga0466966_0011528
486 Ga0466966_0013530
487 Ga0466966_0047781
488 Ga0466961_0003831
489 Ga0466961_0006409
490 Ga0466961_0015012
491 Ga0466961_0033216
492 Ga0466963_0002695
493 Ga0466963_0012145
494 Ga0466971_0025003
495 Ga0466968_0000167
496 Ga0466970_0002573
497 Ga0466957_0000904
498 Ga0466959_0002222
499 Ga0466959_0012747
500 Ga0466959_0014175
501 Ga0466959_0024851
502 Ga0466959_0079331
503 Ga0466958_0000351
504 Ga0466967_0002340
505 Ga0466967_0020733
506 Ga0466967_0137255
507 Ga0466967_0208337
508 Ga0495650_0008169
509 Ga0495585_0007174
510 Ga0495594_0027359
511 Ga0495640_0015823
512 Ga0495604_0002079
513 Ga0495604_0003657
514 Ga0495686_0027403
515 Ga0496101_0065107
516 Ga0496102_0042804
517 Ga0496104_0011232
518 Ga0496104_0064161
519 Ga0496108_0000109
520 Ga0496108_0012082
521 Ga0496109_0009370
522 Ga0496110_0005044
523 Ga0496111_0000271
524 Ga0496114_0000705
525 Ga0496114_0015994
526 Ga0496119_0011146
527 Ga0496119_0017900
528 Ga0496120_0001689
529 Ga0496121_0000882
530 Ga0501031_0006174
531 Ga0501031_0015431
532 Ga0501031_0023506
533 Ga0501032_0002990
534 Ga0501032_0008140
535 Ga0501033_0001832
536 Ga0501034_0096295
537 Ga0501036_0072585
538 Ga0501036_0075645
539 Ga0501037_0001324
540 Ga0501037_0002571
541 Ga0501037_0024306
542 Ga0501037_0036157
543 Ga0501038_0012429
544 Ga0501038_0044380
545 Ga0501041_0001942
546 Ga0501042_0039761
547 Ga0501042_0041624
548 Ga0501042_0051402
549 Ga0501043_0004722
550 Ga0501043_0033592
551 Ga0501043_0057702
552 Ga0501046_0009586
553 Ga0501046_0142670
554 Ga0501047_0000836
555 Ga0501048_0002134
556 Ga0501071_0003824
557 Ga0501072_0005469
558 Ga0501073_0037908
559 Ga0501083_0075196
560 Ga0501035_0011635
561 Ga0501035_0063461
562 Ga0501044_0004261
563 nmdc:mga05p37_307674_c1
564 nmdc:mga05p37_9181_c1
565 nmdc:mga09592_25782_c1
566 nmdc:mga0qj67_2820_c1
567 nmdc:mga06r32_191074_c1
568 nmdc:mga08y16_3789_c1
569 Ga0500594_0004048
570 Ga0500568_0001333
571 Ga0500616_0003233
572 Ga0500616_0006191
573 Ga0501082_0039169
574 Ga0466962_0000485
575 Ga0466962_0002684
576 8054916506
577 2501941484
578 2508677773
579 2515497562
580 2515719494
581 2515757302
582 2516083833
583 2516088773
584 2517761943
585 2523386982
586 2528202857
587 2528213235
588 2546947628
589 2559424202
590 2579748385
591 2579858442
592 2586063849
593 2619857609
594 2620354252
595 2623588747
596 2626634934
597 2643763396
598 2643904730
599 2644406004
600 2644463734
601 2676205199
602 2686542165
603 2689964031
604 2689992701
605 2710605543
606 2734968237
607 2739364709
608 2744958334
609 2753075682
610 2753266677
611 2772647389
612 2774849774
613 2774864241
614 2791914096
615 2793980899
616 2795783302
617 2809586902
618 2819698146
619 2819743658
620 2831936121
621 2832006632
622 2855673245
623 2855681042
624 2855685628
625 2856863058
626 2857293563
627 2858851371
628 2858874039
629 2858887623
630 2858892743
631 2858897009
632 2858905988
633 2862705498
634 2866070307
635 2866614693
636 2867306599
637 2867318092
638 2867324281
639 2867346654
640 2867372905
641 2867507575
642 2869053028
643 2869067054
644 2869070189
645 2870725261
646 2870783948
647 2873152876
648 2880491664
649 2880500678
650 2899366423
651 2902583228
652 2904766641
653 2904772810
654 2908811603
655 2912758650
656 2915772157
657 2917738898
658 2919420924
659 2919433318
660 2929222867
661 2929229184
662 2946051773
663 2966602379
664 2990047930
665 2996224975
666 2997607312
667 3006328516
668 3006487545
669 637877571
670 649815170
671 8003321182
672 8003835998
673 8003860457
674 8003872897
675 8008491080
676 8025530409
677 8047712788
678 8047901829
679 8048130853
680 8048357062
681 8048378765
682 8048387867
683 8054709229
684 8054729077
685 8054738119
686 8054922851
687 8055158161
688 8055412620

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00183

HSP90

Hsp90 protein

191

661

0.9

PF13589

HATPase_c_3

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

28

180

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gq0-assembly1.cif.gz_A crystal structure of the middle domain of htpg, the e. coli hsp90 0.9758 223 467
6ksq-assembly1.cif.gz_A middle domain of human hsp90 alpha 0.9607 222 467
1usv-assembly1.cif.gz_A the structure of the complex between aha1 and hsp90 0.9489 222 470
3q6n-assembly1.cif.gz_C crystal structure of human mc-hsp90 in p21 space group 0.9437 226 606
1usv-assembly4.cif.gz_G the structure of the complex between aha1 and hsp90 0.9396 222 467
ID Description Score Start End Superfamily
af_Q0J0Z5_511_575_3.40.50.11260 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.985 384 444 3.40.50.11260
af_Q58FF6_330_445_3.40.50.11260 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9786 368 467 3.40.50.11260
af_K7V364_511_598_3.40.50.11260 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9761 384 470 3.40.50.11260
af_Q9VAY2_505_592_3.40.50.11260 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9755 384 471 3.40.50.11260
af_Q4D253_1_100_3.40.50.11260 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9674 369 466 3.40.50.11260
ID Description Score Start End GO Terms
AF-A0A6A4R946-F1-model_v4 Molecular chaperone HtpG 0.9795 222 393 GO:0005524
GO:0016887
GO:0051082
GO:0140662
AF-A0A2W7BFM7-F1-model_v4 Molecular chaperone HtpG 0.9757 224 467 GO:0005524
GO:0016887
GO:0051082
GO:0140662
AF-A0A109S8G0-F1-model_v4 deleted 0.972 222 606
AF-A0A0C5GG45-F1-model_v4 Heat shock protein 90 beta 0.9672 255 381 GO:0005524
GO:0016887
GO:0051082
GO:0140662
AF-E9I014-F1-model_v4 Heat shock protein 90 0.9642 238 406 GO:0005524
GO:0005737
GO:0016887
GO:0051082
GO:0140662

Map