Scaffold Information

Sample ID 3300005842
Scaffold Ga0068858_100000054
Sample Name Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2
Length 119686
Fam Num 4
Taxonomy Bacteria
Environment Rhizosphere
Lineage Bacteria;Actinomycetota;Actinomycetes;Frankiales;Frankiaceae;Frankia;Frankia

CRISPR Details

Start Coordinate: 7318 End Coordinate: 34498
Position Repeat Spacer
7318 CTCGCTAACCCCCGCCCGATCATGAGGGCATAGAAAC CCAGACGAATCTGGTTTTGAGGATTCTTGGTGTATC
7391 CTCGCTAACCCCCGCCCGATCATGAGGGCATAGAAAC CGTCCGGGTTGCCGCCATCGATCGCGGCGAGGCAGG
7464 CTCGCTAACCCCCGCCCGATCATGAGGGCATAGAAAC TGTCCCCGAGGCCCAGCCACGGGAACGCGTTGTCCG
7537 CTCGCTAACCCCCGCCCGATCATGAGGGCATAGAAAC TTTGTTTCCGTAGTTGTAGATTGCGCAGATGAGGTCG
7611 AGCTCTAATCCTCGCCCGATCAGGAGGGCATAGAACT -
34234 GTTTCTATGCCCTCATGATCGGGCGGGGGTTAGCGAG GGACGCCTACATCGAACTCATCTGGAAGCCGATCGAC
34308 GTTTCTATGCTCTCCTGATCGGGCGGGGGTTAGCGAG ACGACCGGGTGTACCGTCCTGAAGACCTAACGGAGGTC
34383 GTTTCTATGCTCTCATGATCGGGCGGCGGTTAGCGAG GCTCGGGCGCCAGGGTCTCGGAGCAGGGCCGCGAGGCCTTG
34461 GTTTCCATGCCCTCATGATCGGGCGGGGGTTAGTGAG -

PFAM Info

PFAM Domain Meaning GOTerms

Scaffold Families

F416196 , F445778 , F467112 , F477952