F414023

General Info

Members Datasets Scaffolds Average Seq Length
339 202 678 273

Family's Representative Sequence

Representative Sequence 3300044683|Ga0466965_0094455|Ga0466965_0094455_146_1084
Length 312
Sequence LNPNAAGRTCIGGGVCRAKGFGGKTMKHWRIEQVAWDRFDPAKVDPEIVPLVKAAAMVERNGGDYALYLNGVFHDDPAFSQAADYWAEEEIQHGDALGKWASLADPGWDYAAAFTRYRAGYKIDTGADASIRGSRTGELIARCMVETGTSSYYTALSEATEEPVLRQVCKLIAADEYRHFKLFYDHMKRYLARENLTFLQRLRVAAGRINESEDEELAFAYHCSNEDPAQGFDHQRCLAGYMSRAMGFYRFRHIERATGMVFKTVGLEPRGRLSDLAAKGGWRLLQWRRARFLAALRQAAPPHLPEGLARAA

Samples

Sample ID Description Type Environment
1 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
53 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
54 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
82 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
90 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
91 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
92 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
93 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
94 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
95 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
96 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
97 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
110 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
111 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
112 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
116 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
119 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
123 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
129 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
130 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
131 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
132 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
135 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
136 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
137 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
138 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
141 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
155 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
156 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
159 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
160 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
171 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
172 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
173 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
174 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
175 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
176 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
177 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
178 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
179 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
180 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
181 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
182 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
183 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
184 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
185 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
186 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
187 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
188 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
189 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
190 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
191 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
192 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
193 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
194 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
195 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
196 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
197 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
198 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified
199 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
200 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
201 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
202 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.46
Metatranscriptomes 1.47
Isolates 2.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.73
Nodule 0
Rhizoplane 1.18
Rhizosphere 79.94
Stem 0
Stem Tuber 0
Unclassified 2.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466965_0094455 3300044683 Bacteria 1524
2 JGI25153J46596_10000322 3300003215 Bacteria 35141
3 Ga0070680_100188743 3300005336 Bacteria 1736
4 Ga0070680_100470546 3300005336 Bacteria 1074
5 Ga0070669_100013503 3300005353 Bacteria 5805
6 Ga0070674_100033420 3300005356 Bacteria 3424
7 Ga0070714_100024422 3300005435 Bacteria 4977
8 Ga0070714_100097362 3300005435 Bacteria 2586
9 Ga0070713_100037153 3300005436 Bacteria 3936
10 Ga0070713_100150635 3300005436 Bacteria 2069
11 Ga0070713_100235977 3300005436 Bacteria 1664
12 Ga0070700_100205815 3300005441 Bacteria 1385
13 Ga0070681_10000763 3300005458 Bacteria 26712
14 Ga0070681_10007576 3300005458 Bacteria 10611
15 Ga0070681_10232571 3300005458 Bacteria 1757
16 Ga0070681_10366611 3300005458 Bacteria 1351
17 Ga0070681_10500108 3300005458 Bacteria 1129
18 Ga0070681_10508822 3300005458 Bacteria 1118
19 Ga0068867_100150247 3300005459 Bacteria 1829
20 Ga0070706_100468695 3300005467 Bacteria 1172
21 Ga0070699_100247278 3300005518 Bacteria 1593
22 Ga0070679_100007556 3300005530 Bacteria 10168
23 Ga0070679_100024139 3300005530 Bacteria 5958
24 Ga0070679_100126105 3300005530 Bacteria 2542
25 Ga0070679_100152708 3300005530 Bacteria 2285
26 Ga0070679_100373505 3300005530 Bacteria 1373
27 Ga0070684_100428021 3300005535 Bacteria 1222
28 Ga0070697_100020555 3300005536 Bacteria 5224
29 Ga0070697_100131960 3300005536 Bacteria 2096
30 Ga0068853_100058362 3300005539 Bacteria 3331
31 Ga0070693_100065562 3300005547 Bacteria 2123
32 Ga0070665_100036095 3300005548 Bacteria 4974
33 Ga0068855_100009856 3300005563 Bacteria 11524
34 Ga0068855_100010278 3300005563 Bacteria 11288
35 Ga0070664_100349245 3300005564 Bacteria 1345
36 Ga0068854_100330744 3300005578 Bacteria 1241
37 Ga0068856_100308604 3300005614 Bacteria 1600
38 Ga0068858_100130415 3300005842 Bacteria 2357
39 Ga0068858_100178379 3300005842 Bacteria 2005
40 Ga0068858_100235328 3300005842 Bacteria 1737
41 Ga0068860_100281899 3300005843 Bacteria 1624
42 Ga0068862_100014633 3300005844 Bacteria 6516
43 Ga0068862_100088085 3300005844 Bacteria 2700
44 Ga0081455_10003752 3300005937 Bacteria 17356
45 Ga0081455_10009931 3300005937 Bacteria 9735
46 Ga0081538_10005092 3300005981 Bacteria 11938
47 Ga0081539_10001962 3300005985 Bacteria 31338
48 Ga0070717_10339563 3300006028 Unclassified 1341
49 Ga0070716_100096512 3300006173 Bacteria 1802
50 Ga0070712_100032908 3300006175 Bacteria 3504
51 Ga0070712_100216028 3300006175 Bacteria 1515
52 Ga0075367_10290309 3300006178 Bacteria 1029
53 Ga0075366_10052057 3300006195 Bacteria 2433
54 Ga0075428_100364782 3300006844 Bacteria 1549
55 Ga0105240_10099627 3300009093 Bacteria 3537
56 Ga0105240_10154668 3300009093 Unclassified 2729
57 Ga0105240_10331541 3300009093 Bacteria 1731
58 Ga0105240_10939897 3300009093 Bacteria 928
59 Ga0111539_10003859 3300009094 Bacteria 19732
60 Ga0105245_10124223 3300009098 Bacteria 2414
61 Ga0105242_10323629 3300009176 Bacteria 1415
62 Ga0105248_10087638 3300009177 Bacteria 3503
63 Ga0105248_10360557 3300009177 Bacteria 1636
64 Ga0105237_10181886 3300009545 Bacteria 2102
65 Ga0105238_10006818 3300009551 Bacteria 11405
66 Ga0105238_10009044 3300009551 Bacteria 9967
67 Ga0105238_10115754 3300009551 Bacteria 2660
68 Ga0105249_10041033 3300009553 Bacteria 4205
69 Ga0105246_10283943 3300011119 Bacteria 1329
70 Ga0157370_10412240 3300013104 Bacteria 1243
71 Ga0157369_10085600 3300013105 Bacteria 3368
72 Ga0157369_10241932 3300013105 Bacteria 1885
73 Ga0163163_10028892 3300014325 Bacteria 5329
74 Ga0163163_10818420 3300014325 Bacteria 995
75 Ga0157380_10034351 3300014326 Bacteria 3911
76 Ga0182008_10087428 3300014497 Bacteria 1535
77 Ga0157379_10307964 3300014968 Bacteria 1444
78 Ga0197907_10179046 3300020069 Bacteria 975
79 Ga0206354_10714061 3300020081 Bacteria 957
80 Ga0213875_10007381 3300021388 Bacteria 5682
81 Ga0213875_10011237 3300021388 Bacteria 4460
82 Ga0213875_10014132 3300021388 Bacteria 3902
83 Ga0213875_10109220 3300021388 Bacteria 1291
84 Ga0213871_10036353 3300021441 Bacteria 1306
85 Ga0224712_10060256 3300022467 Bacteria 1510
86 Ga0224712_10191820 3300022467 Bacteria 925
87 Ga0209758_1000202 3300025297 Bacteria 132401
88 Ga0209758_1023819 3300025297 Bacteria 2752
89 Ga0209050_1002212 3300025298 Bacteria 17468
90 Ga0209257_1001257 3300025304 Bacteria 31310
91 Ga0207642_10013642 3300025899 Bacteria 2972
92 Ga0207705_10004083 3300025909 Bacteria 11082
93 Ga0207684_10113017 3300025910 Bacteria 2325
94 Ga0207684_10499536 3300025910 Bacteria 1043
95 Ga0207695_10248688 3300025913 Unclassified 1678
96 Ga0207695_10480443 3300025913 Bacteria 1125
97 Ga0207693_10043333 3300025915 Bacteria 3541
98 Ga0207693_10170349 3300025915 Bacteria 1715
99 Ga0207660_10023122 3300025917 Bacteria 4194
100 Ga0207657_10075127 3300025919 Bacteria 2852
101 Ga0207652_10005439 3300025921 Bacteria 10335
102 Ga0207652_10013105 3300025921 Bacteria 6711
103 Ga0207652_10042866 3300025921 Bacteria 3853
104 Ga0207652_10084335 3300025921 Bacteria 2783
105 Ga0207652_10130739 3300025921 Bacteria 2239
106 Ga0207694_10021284 3300025924 Bacteria 4913
107 Ga0207700_10026251 3300025928 Bacteria 4059
108 Ga0207700_10164413 3300025928 Bacteria 1845
109 Ga0207700_10250241 3300025928 Unclassified 1514
110 Ga0207664_10021456 3300025929 Bacteria 4804
111 Ga0207690_10060133 3300025932 Bacteria 2577
112 Ga0207669_10172403 3300025937 Bacteria 1541
113 Ga0207667_10014525 3300025949 Bacteria 8974
114 Ga0207667_10179990 3300025949 Bacteria 2171
115 Ga0207667_10386472 3300025949 Unclassified 1426
116 Ga0207703_10186519 3300026035 Bacteria 1834
117 Ga0207703_10273234 3300026035 Bacteria 1532
118 Ga0207639_10320499 3300026041 Bacteria 1376
119 Ga0207708_10047001 3300026075 Bacteria 3287
120 Ga0207708_10470748 3300026075 Bacteria 1049
121 Ga0207702_10091326 3300026078 Bacteria 2666
122 Ga0207702_10158208 3300026078 Bacteria 2067
123 Ga0207648_10564612 3300026089 Unclassified 1046
124 Ga0207683_10126705 3300026121 Bacteria 2295
125 Ga0207428_10000134 3300027907 Bacteria 99640
126 Ga0268266_10055354 3300028379 Bacteria 3410
127 Ga0268266_10058372 3300028379 Bacteria 3323
128 Ga0268265_10116978 3300028380 Bacteria 2188
129 Ga0307517_10100040 3300028786 Bacteria 2293
130 Ga0307517_10126417 3300028786 Bacteria 1863
131 Ga0265339_10004480 3300031249 Bacteria 9530
132 Ga0265331_10003557 3300031250 Bacteria 9991
133 Ga0307513_10240894 3300031456 Bacteria 1614
134 Ga0307408_100156811 3300031548 Bacteria 1804
135 Ga0265313_10000110 3300031595 Bacteria 82958
136 Ga0265342_10012018 3300031712 Bacteria 5880
137 Ga0307409_100050515 3300031995 Bacteria 3176
138 Ga0307414_10056756 3300032004 Bacteria 2749
139 Ga0307411_10002217 3300032005 Bacteria 8463
140 Ga0373945_0019814 3300035116 Bacteria 2298
141 Ga0373953_0061593 3300035117 Bacteria 1535
142 Ga0373955_0059926 3300035172 Bacteria 2098
143 Ga0373931_0015336 3300035691 Bacteria 3757
144 Ga0373935_0015471 3300035692 Bacteria 4612
145 Ga0373927_0043356 3300035695 Bacteria 2913
146 Ga0373927_0226379 3300035695 Bacteria 1229
147 Ga0373933_0013090 3300035724 Bacteria 4593
148 Ga0373933_0018430 3300035724 Bacteria 3926
149 Ga0373933_0051749 3300035724 Bacteria 2456
150 Ga0373947_0055503 3300035725 Bacteria 2392
151 Ga0373947_0254846 3300035725 Bacteria 1161
152 Ga0373937_0002155 3300036401 Bacteria 16482
153 Ga0373937_0006204 3300036401 Bacteria 10298
154 Ga0373937_0018737 3300036401 Bacteria 6186
155 Ga0373937_0048681 3300036401 Bacteria 3880
156 Ga0373937_0082081 3300036401 Bacteria 2982
157 Ga0373937_0083818 3300036401 Bacteria 2949
158 Ga0373937_0133780 3300036401 Bacteria 2317
159 Ga0373937_0281378 3300036401 Bacteria 1571
160 Ga0373937_0298273 3300036401 Bacteria 1523
161 Ga0373937_0387168 3300036401 Bacteria 1326
162 Ga0373925_0046652 3300037068 Bacteria 3222
163 Ga0373925_0147954 3300037068 Bacteria 1842
164 Ga0373925_0419342 3300037068 Bacteria 1093
165 Ga0395899_0012352 3300037312 Bacteria 6540
166 Ga0395899_0045560 3300037312 Bacteria 3268
167 Ga0395900_0004256 3300037418 Bacteria 15191
168 Ga0395900_0176219 3300037418 Bacteria 2175
169 Ga0395900_0481740 3300037418 Bacteria 1193
170 Ga0395898_0009592 3300037466 Bacteria 10165
171 Ga0395898_0412642 3300037466 Bacteria 1287
172 Ga0436364_0103333 3300037853 Bacteria 4600
173 Ga0436364_0430075 3300037853 Bacteria 1494
174 Ga0436364_0557152 3300037853 Bacteria 8106
175 Ga0436364_0575966 3300037853 Bacteria 2342
176 Ga0436364_0667900 3300037853 Bacteria 105608
177 Ga0436364_0873529 3300037853 Bacteria 2038
178 Ga0436364_0965048 3300037853 Unclassified 1864
179 Ga0436364_1017587 3300037853 Bacteria 8124
180 Ga0436364_1323807 3300037853 Bacteria 32431
181 Ga0436364_1514042 3300037853 Bacteria 9708
182 Ga0395901_0016604 3300038443 Bacteria 7502
183 Ga0395901_0067918 3300038443 Bacteria 3714
184 Ga0436365_0202965 3300039437 Bacteria 3151
185 Ga0436365_0626378 3300039437 Bacteria 2535
186 Ga0436365_0662173 3300039437 Bacteria 1719
187 Ga0436365_0717977 3300039437 Bacteria 2827
188 Ga0436365_1353208 3300039437 Bacteria 1001
189 Ga0436360_0017377 3300039438 Bacteria 6500
190 Ga0436360_0278542 3300039438 Bacteria 1742
191 Ga0436360_0629542 3300039438 Bacteria 3480
192 Ga0436360_0914507 3300039438 Bacteria 2730
193 Ga0436360_1102741 3300039438 Bacteria 2147
194 Ga0436361_0529814 3300039447 Bacteria 2637
195 Ga0436363_1448724 3300039450 Bacteria 1480
196 Ga0436362_0936134 3300039453 Bacteria 5585
197 Ga0451807_1498963 3300041486 Bacteria 1364
198 Ga0466960_0041313 3300044901 Bacteria 2184
199 Ga0451576_0003094 3300045051 Bacteria 23346
200 Ga0451576_0202669 3300045051 Bacteria 2072
201 Ga0466967_0163193 3300045976 Bacteria 2093
202 Ga0495592_0020910 3300046454 Bacteria 4978
203 Ga0495638_0067785 3300046460 Bacteria 2190
204 Ga0495651_0079444 3300046462 Bacteria 2479
205 Ga0495651_0182688 3300046462 Bacteria 1483
206 Ga0495664_0009665 3300046477 Bacteria 5400
207 Ga0495594_0192554 3300046499 Bacteria 1162
208 Ga0495608_0014153 3300046511 Bacteria 5535
209 Ga0495628_0023107 3300046516 Bacteria 5106
210 Ga0495640_0151037 3300046533 Bacteria 1492
211 Ga0495598_0057030 3300046537 Bacteria 1194
212 Ga0495645_0000377 3300046543 Bacteria 31023
213 Ga0495667_0122186 3300046559 Bacteria 1681
214 Ga0495667_0146676 3300046559 Bacteria 1520
215 Ga0495656_0029283 3300046615 Bacteria 2216
216 Ga0495625_0037157 3300046660 Bacteria 3575
217 Ga0495635_0054104 3300046663 Bacteria 2765
218 Ga0495657_0100942 3300046675 Bacteria 1839
219 Ga0495599_0091878 3300046678 Bacteria 1894
220 Ga0495646_0057069 3300046680 Bacteria 2339
221 Ga0495600_0045206 3300046809 Bacteria 2873
222 Ga0495604_0019252 3300047317 Bacteria 5466
223 Ga0495674_0053910 3300047319 Bacteria 3533
224 Ga0495674_0087287 3300047319 Bacteria 2670
225 Ga0495680_0057247 3300047322 Bacteria 3015
226 Ga0495680_0089190 3300047322 Bacteria 2315
227 Ga0495684_0114109 3300047471 Bacteria 2037
228 Ga0495684_0181022 3300047471 Bacteria 1562
229 Ga0495684_0408602 3300047471 Bacteria 951
230 Ga0495686_0078143 3300047472 Bacteria 2026
231 Ga0495602_0001791 3300048088 Bacteria 21471
232 Ga0495602_0336443 3300048088 Bacteria 1093
233 Ga0496112_0071496 3300048915 Bacteria 3429
234 Ga0496112_0364118 3300048915 Bacteria 1388
235 Ga0496113_0274848 3300048916 Bacteria 1347
236 Ga0496119_0015060 3300048922 Bacteria 5989
237 Ga0496126_0137836 3300048929 Bacteria 2103
238 Ga0496126_0205393 3300048929 Bacteria 1661
239 Ga0501032_0018802 3300049569 Bacteria 4835
240 Ga0501032_0147875 3300049569 Unclassified 1546
241 Ga0501033_0016580 3300049570 Bacteria 5573
242 Ga0501033_0090287 3300049570 Bacteria 2241
243 Ga0501034_0009692 3300049571 Bacteria 10075
244 Ga0501034_0090384 3300049571 Unclassified 3060
245 Ga0501034_0133961 3300049571 Bacteria 2460
246 Ga0501036_0065749 3300049572 Bacteria 3068
247 Ga0501037_0004604 3300049573 Bacteria 10024
248 Ga0501037_0081875 3300049573 Bacteria 2340
249 Ga0501037_0294954 3300049573 Bacteria 1127
250 Ga0501038_0001289 3300049574 Bacteria 22805
251 Ga0501038_0032268 3300049574 Bacteria 4622
252 Ga0501038_0040953 3300049574 Bacteria 4042
253 Ga0501038_0223143 3300049574 Bacteria 1503
254 Ga0501039_0013615 3300049575 Bacteria 6220
255 Ga0501039_0068293 3300049575 Bacteria 2760
256 Ga0501043_0003306 3300049579 Bacteria 13282
257 Ga0501043_0053614 3300049579 Bacteria 3167
258 Ga0501043_0083122 3300049579 Bacteria 2517
259 Ga0501043_0288829 3300049579 Bacteria 1256
260 Ga0501046_0001203 3300049580 Bacteria 25174
261 Ga0501046_0018148 3300049580 Bacteria 5859
262 Ga0501047_0015884 3300049581 Bacteria 7175
263 Ga0501047_0138779 3300049581 Bacteria 2310
264 Ga0501047_0257539 3300049581 Bacteria 1593
265 Ga0501048_0023149 3300049582 Bacteria 4542
266 Ga0501067_0055758 3300049583 Bacteria 2189
267 Ga0501068_0005117 3300049584 Bacteria 7143
268 Ga0501068_0040957 3300049584 Bacteria 2783
269 Ga0501069_0006117 3300049585 Bacteria 6283
270 Ga0501069_0158360 3300049585 Bacteria 1303
271 Ga0501070_0000948 3300049586 Bacteria 26193
272 Ga0501070_0044331 3300049586 Bacteria 3702
273 Ga0501070_0085578 3300049586 Bacteria 2610
274 Ga0501070_0190889 3300049586 Bacteria 1684
275 Ga0501073_0066761 3300049589 Bacteria 2507
276 Ga0501073_0104540 3300049589 Bacteria 1965
277 Ga0501073_0136849 3300049589 Bacteria 1697
278 Ga0501074_0016372 3300049590 Bacteria 5384
279 Ga0501079_0345939 3300049741 Bacteria 1165
280 Ga0501080_0019914 3300049742 Bacteria 6213
281 Ga0501080_0244094 3300049742 Bacteria 1639
282 Ga0501083_0009468 3300049744 Bacteria 6880
283 Ga0501035_0057955 3300049822 Bacteria 3452
284 Ga0501035_0080310 3300049822 Bacteria 2880
285 Ga0501035_0376756 3300049822 Bacteria 1184
286 Ga0501035_0794562 3300049822 Bacteria 756
287 Ga0501044_0006167 3300049823 Bacteria 13250
288 Ga0501044_0008848 3300049823 Bacteria 11010
289 Ga0501044_0023895 3300049823 Bacteria 6496
290 Ga0501044_0087894 3300049823 Bacteria 3138
291 Ga0501044_0090909 3300049823 Bacteria 3079
292 nmdc:mga0k408_60159_c1 3300050493 Bacteria 2207
293 nmdc:mga05p37_277638_c1 3300050507 Bacteria 1999
294 nmdc:mga05p37_85333_c1 3300050507 Bacteria 3890
295 nmdc:mga06r32_268048_c2 3300050510 Bacteria 1344
296 nmdc:mga08y16_375_c1 3300050511 Bacteria 40600
297 nmdc:mga0n895_436780_c1 3300050512 Bacteria 1322
298 Ga0495601_0001235 3300053077 Bacteria 14007
299 Ga0495612_0000391 3300053078 Bacteria 17550
300 Ga0495619_0010513 3300053085 Bacteria 5825
301 Ga0500643_031691 3300053087 Bacteria 1610
302 Ga0500643_033370 3300053087 Bacteria 1557
303 Ga0500644_0090124 3300053088 Bacteria 1146
304 Ga0500646_0003590 3300053090 Bacteria 3974
305 Ga0500583_0222304 3300053092 Bacteria 936
306 Ga0500651_0007969 3300053093 Bacteria 6200
307 Ga0500651_0085669 3300053093 Bacteria 1947
308 Ga0500651_0227795 3300053093 Bacteria 1091
309 Ga0500641_0007409 3300053096 Bacteria 3912
310 Ga0500555_010806 3300053103 Bacteria 2621
311 Ga0500556_0103514 3300053104 Bacteria 1098
312 Ga0500595_000812 3300053119 Bacteria 18030
313 Ga0500642_0000382 3300053130 Bacteria 14795
314 Ga0500577_0040141 3300053142 Bacteria 1700
315 Ga0500577_0107546 3300053142 Bacteria 1147
316 Ga0500588_0003160 3300053146 Bacteria 3446
317 Ga0500588_0038810 3300053146 Bacteria 1422
318 Ga0500588_0071714 3300053146 Bacteria 1137
319 Ga0500604_0004765 3300053151 Bacteria 3594
320 Ga0500616_0001137 3300053153 Bacteria 27368
321 Ga0500633_0051790 3300053160 Bacteria 1419
322 Ga0500634_0128529 3300053161 Bacteria 1220
323 Ga0500609_000742 3300053731 Bacteria 4911
324 Ga0500609_003748 3300053731 Bacteria 2118
325 Ga0500599_013533 3300053736 Bacteria 1104
326 Ga0501084_0059288 3300054114 Bacteria 3204
327 Ga0501084_0089648 3300054114 Bacteria 2581
328 Ga0590071_010556 3300059421 Bacteria 2163
329 Ga0590074_017922 3300059423 Bacteria 1211
330 Ga0587111_0032325 3300060346 Bacteria 1076
331 Ga0501082_0030488 3300060353 Bacteria 4647
332 Ga0501082_0121982 3300060353 Bacteria 2259
333 2883581524 2883577096 Bacteria 4709178
334 2894775540 2894772417 Bacteria 5305674
335 2909402851 2909399089 Bacteria 3922598
336 2929201375 2929199973 Bacteria 7260745
337 641336898 641228493 Bacteria 3999591
338 643392915 643348555 Bacteria 3914947
339 8055915482 8055909800 Bacteria 7278581
340 Ga0466965_0094455
341 JGI25153J46596_10000322
342 Ga0070680_100188743
343 Ga0070680_100470546
344 Ga0070669_100013503
345 Ga0070674_100033420
346 Ga0070714_100024422
347 Ga0070714_100097362
348 Ga0070713_100037153
349 Ga0070713_100150635
350 Ga0070713_100235977
351 Ga0070700_100205815
352 Ga0070681_10000763
353 Ga0070681_10007576
354 Ga0070681_10232571
355 Ga0070681_10366611
356 Ga0070681_10500108
357 Ga0070681_10508822
358 Ga0068867_100150247
359 Ga0070706_100468695
360 Ga0070699_100247278
361 Ga0070679_100007556
362 Ga0070679_100024139
363 Ga0070679_100126105
364 Ga0070679_100152708
365 Ga0070679_100373505
366 Ga0070684_100428021
367 Ga0070697_100020555
368 Ga0070697_100131960
369 Ga0068853_100058362
370 Ga0070693_100065562
371 Ga0070665_100036095
372 Ga0068855_100009856
373 Ga0068855_100010278
374 Ga0070664_100349245
375 Ga0068854_100330744
376 Ga0068856_100308604
377 Ga0068858_100130415
378 Ga0068858_100178379
379 Ga0068858_100235328
380 Ga0068860_100281899
381 Ga0068862_100014633
382 Ga0068862_100088085
383 Ga0081455_10003752
384 Ga0081455_10009931
385 Ga0081538_10005092
386 Ga0081539_10001962
387 Ga0070717_10339563
388 Ga0070716_100096512
389 Ga0070712_100032908
390 Ga0070712_100216028
391 Ga0075367_10290309
392 Ga0075366_10052057
393 Ga0075428_100364782
394 Ga0105240_10099627
395 Ga0105240_10154668
396 Ga0105240_10331541
397 Ga0105240_10939897
398 Ga0111539_10003859
399 Ga0105245_10124223
400 Ga0105242_10323629
401 Ga0105248_10087638
402 Ga0105248_10360557
403 Ga0105237_10181886
404 Ga0105238_10006818
405 Ga0105238_10009044
406 Ga0105238_10115754
407 Ga0105249_10041033
408 Ga0105246_10283943
409 Ga0157370_10412240
410 Ga0157369_10085600
411 Ga0157369_10241932
412 Ga0163163_10028892
413 Ga0163163_10818420
414 Ga0157380_10034351
415 Ga0182008_10087428
416 Ga0157379_10307964
417 Ga0197907_10179046
418 Ga0206354_10714061
419 Ga0213875_10007381
420 Ga0213875_10011237
421 Ga0213875_10014132
422 Ga0213875_10109220
423 Ga0213871_10036353
424 Ga0224712_10060256
425 Ga0224712_10191820
426 Ga0209758_1000202
427 Ga0209758_1023819
428 Ga0209050_1002212
429 Ga0209257_1001257
430 Ga0207642_10013642
431 Ga0207705_10004083
432 Ga0207684_10113017
433 Ga0207684_10499536
434 Ga0207695_10248688
435 Ga0207695_10480443
436 Ga0207693_10043333
437 Ga0207693_10170349
438 Ga0207660_10023122
439 Ga0207657_10075127
440 Ga0207652_10005439
441 Ga0207652_10013105
442 Ga0207652_10042866
443 Ga0207652_10084335
444 Ga0207652_10130739
445 Ga0207694_10021284
446 Ga0207700_10026251
447 Ga0207700_10164413
448 Ga0207700_10250241
449 Ga0207664_10021456
450 Ga0207690_10060133
451 Ga0207669_10172403
452 Ga0207667_10014525
453 Ga0207667_10179990
454 Ga0207667_10386472
455 Ga0207703_10186519
456 Ga0207703_10273234
457 Ga0207639_10320499
458 Ga0207708_10047001
459 Ga0207708_10470748
460 Ga0207702_10091326
461 Ga0207702_10158208
462 Ga0207648_10564612
463 Ga0207683_10126705
464 Ga0207428_10000134
465 Ga0268266_10055354
466 Ga0268266_10058372
467 Ga0268265_10116978
468 Ga0307517_10100040
469 Ga0307517_10126417
470 Ga0265339_10004480
471 Ga0265331_10003557
472 Ga0307513_10240894
473 Ga0307408_100156811
474 Ga0265313_10000110
475 Ga0265342_10012018
476 Ga0307409_100050515
477 Ga0307414_10056756
478 Ga0307411_10002217
479 Ga0373945_0019814
480 Ga0373953_0061593
481 Ga0373955_0059926
482 Ga0373931_0015336
483 Ga0373935_0015471
484 Ga0373927_0043356
485 Ga0373927_0226379
486 Ga0373933_0013090
487 Ga0373933_0018430
488 Ga0373933_0051749
489 Ga0373947_0055503
490 Ga0373947_0254846
491 Ga0373937_0002155
492 Ga0373937_0006204
493 Ga0373937_0018737
494 Ga0373937_0048681
495 Ga0373937_0082081
496 Ga0373937_0083818
497 Ga0373937_0133780
498 Ga0373937_0281378
499 Ga0373937_0298273
500 Ga0373937_0387168
501 Ga0373925_0046652
502 Ga0373925_0147954
503 Ga0373925_0419342
504 Ga0395899_0012352
505 Ga0395899_0045560
506 Ga0395900_0004256
507 Ga0395900_0176219
508 Ga0395900_0481740
509 Ga0395898_0009592
510 Ga0395898_0412642
511 Ga0436364_0103333
512 Ga0436364_0430075
513 Ga0436364_0557152
514 Ga0436364_0575966
515 Ga0436364_0667900
516 Ga0436364_0873529
517 Ga0436364_0965048
518 Ga0436364_1017587
519 Ga0436364_1323807
520 Ga0436364_1514042
521 Ga0395901_0016604
522 Ga0395901_0067918
523 Ga0436365_0202965
524 Ga0436365_0626378
525 Ga0436365_0662173
526 Ga0436365_0717977
527 Ga0436365_1353208
528 Ga0436360_0017377
529 Ga0436360_0278542
530 Ga0436360_0629542
531 Ga0436360_0914507
532 Ga0436360_1102741
533 Ga0436361_0529814
534 Ga0436363_1448724
535 Ga0436362_0936134
536 Ga0451807_1498963
537 Ga0466960_0041313
538 Ga0451576_0003094
539 Ga0451576_0202669
540 Ga0466967_0163193
541 Ga0495592_0020910
542 Ga0495638_0067785
543 Ga0495651_0079444
544 Ga0495651_0182688
545 Ga0495664_0009665
546 Ga0495594_0192554
547 Ga0495608_0014153
548 Ga0495628_0023107
549 Ga0495640_0151037
550 Ga0495598_0057030
551 Ga0495645_0000377
552 Ga0495667_0122186
553 Ga0495667_0146676
554 Ga0495656_0029283
555 Ga0495625_0037157
556 Ga0495635_0054104
557 Ga0495657_0100942
558 Ga0495599_0091878
559 Ga0495646_0057069
560 Ga0495600_0045206
561 Ga0495604_0019252
562 Ga0495674_0053910
563 Ga0495674_0087287
564 Ga0495680_0057247
565 Ga0495680_0089190
566 Ga0495684_0114109
567 Ga0495684_0181022
568 Ga0495684_0408602
569 Ga0495686_0078143
570 Ga0495602_0001791
571 Ga0495602_0336443
572 Ga0496112_0071496
573 Ga0496112_0364118
574 Ga0496113_0274848
575 Ga0496119_0015060
576 Ga0496126_0137836
577 Ga0496126_0205393
578 Ga0501032_0018802
579 Ga0501032_0147875
580 Ga0501033_0016580
581 Ga0501033_0090287
582 Ga0501034_0009692
583 Ga0501034_0090384
584 Ga0501034_0133961
585 Ga0501036_0065749
586 Ga0501037_0004604
587 Ga0501037_0081875
588 Ga0501037_0294954
589 Ga0501038_0001289
590 Ga0501038_0032268
591 Ga0501038_0040953
592 Ga0501038_0223143
593 Ga0501039_0013615
594 Ga0501039_0068293
595 Ga0501043_0003306
596 Ga0501043_0053614
597 Ga0501043_0083122
598 Ga0501043_0288829
599 Ga0501046_0001203
600 Ga0501046_0018148
601 Ga0501047_0015884
602 Ga0501047_0138779
603 Ga0501047_0257539
604 Ga0501048_0023149
605 Ga0501067_0055758
606 Ga0501068_0005117
607 Ga0501068_0040957
608 Ga0501069_0006117
609 Ga0501069_0158360
610 Ga0501070_0000948
611 Ga0501070_0044331
612 Ga0501070_0085578
613 Ga0501070_0190889
614 Ga0501073_0066761
615 Ga0501073_0104540
616 Ga0501073_0136849
617 Ga0501074_0016372
618 Ga0501079_0345939
619 Ga0501080_0019914
620 Ga0501080_0244094
621 Ga0501083_0009468
622 Ga0501035_0057955
623 Ga0501035_0080310
624 Ga0501035_0376756
625 Ga0501035_0794562
626 Ga0501044_0006167
627 Ga0501044_0008848
628 Ga0501044_0023895
629 Ga0501044_0087894
630 Ga0501044_0090909
631 nmdc:mga0k408_60159_c1
632 nmdc:mga05p37_277638_c1
633 nmdc:mga05p37_85333_c1
634 nmdc:mga06r32_268048_c2
635 nmdc:mga08y16_375_c1
636 nmdc:mga0n895_436780_c1
637 Ga0495601_0001235
638 Ga0495612_0000391
639 Ga0495619_0010513
640 Ga0500643_031691
641 Ga0500643_033370
642 Ga0500644_0090124
643 Ga0500646_0003590
644 Ga0500583_0222304
645 Ga0500651_0007969
646 Ga0500651_0085669
647 Ga0500651_0227795
648 Ga0500641_0007409
649 Ga0500555_010806
650 Ga0500556_0103514
651 Ga0500595_000812
652 Ga0500642_0000382
653 Ga0500577_0040141
654 Ga0500577_0107546
655 Ga0500588_0003160
656 Ga0500588_0038810
657 Ga0500588_0071714
658 Ga0500604_0004765
659 Ga0500616_0001137
660 Ga0500633_0051790
661 Ga0500634_0128529
662 Ga0500609_000742
663 Ga0500609_003748
664 Ga0500599_013533
665 Ga0501084_0059288
666 Ga0501084_0089648
667 Ga0590071_010556
668 Ga0590074_017922
669 Ga0587111_0032325
670 Ga0501082_0030488
671 Ga0501082_0121982
672 2883581524
673 2894775540
674 2909402851
675 2929201375
676 641336898
677 643392915
678 8055915482

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03405

FA_desaturase_2

Fatty acid desaturase

63

204

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7s5c-assembly1.cif.gz_F m. xanthus ferritin-like protein encb 0.9722 109 163
7s5k-assembly1.cif.gz_B m. xanthus ferritin-like protein encb 0.9192 111 170
7s5c-assembly1.cif.gz_F m. xanthus ferritin-like protein encb 0.8937 109 163
5n5f-assembly1.cif.gz_G crystal structure of haliangium ochraceum encapsulated ferritin 0.8688 113 171
7s5k-assembly1.cif.gz_B m. xanthus ferritin-like protein encb 0.8388 111 170
ID Description Score Start End Superfamily
1mftB00 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces;Immunoglobulin FC, subunit C 0.9687 113 158 1.20.5.420
5n5fA00 Special;Helix non-globular;Helix Hairpins; 0.8809 113 170 6.10.140.1960
5n5fG00 Special;Helix non-globular;Helix Hairpins; 0.8688 113 171 6.10.140.1960
5n5fH00 Special;Helix non-globular;Helix Hairpins; 0.8687 113 171 6.10.140.1960
1mftB00 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces;Immunoglobulin FC, subunit C 0.8614 113 158 1.20.5.420
ID Description Score Start End GO Terms
AF-A0A2N3E1L6-F1-model_v4 Rubrerythrin family protein 0.9942 1 154 GO:0016491
AF-A0A5J6MQA8-F1-model_v4 Rubrerythrin family protein 0.9925 1 270 GO:0006633
GO:0045300
AF-A0A5J6MQA8-F1-model_v4 Rubrerythrin family protein 0.9888 1 270 GO:0006633
GO:0045300
AF-A0A533RYI4-F1-model_v4 Ferritin-like domain-containing protein 0.9886 1 134 GO:0016491
AF-A0A4D7C2P8-F1-model_v4 Ferritin-like domain-containing protein 0.9881 1 157 GO:0016491

Map