F413351

General Info

Members Datasets Scaffolds Average Seq Length
338 227 320 398

Family's Representative Sequence

Representative Sequence 3300005262|Ga0065165_1001406|Ga0065165_100140611
Length 353
Sequence MYAVKANPSPELLQILWDSGITHFDVASIGEVRLVARTVPGATLCFMHPVKAEEAIEEAYFTHGVRVFSLDSMEELEKIVRATRGATDLTLCVRIRVSSDLSKLSLASKFGVGPGNECTALLIAARQAADALGICFHVGSQAMSPEAYSNAMERVRTAIVEAGVTVDVIDVGGGFPSSYPGMEPPPLDRYFETIHRAFESLPVSYSAELWAEPGRALCAEYSSLIVRVERRRGAELYINDGAYGALFDAAHIGWRFPVRLLREPDSNAKDVEFSFYGPTCDDLDHMAGPFLLPADIRPGDYIEIGMLGAYGSAMRTAFNGFGTDETVIVNDEPMASLYTRVAEAAVSSNVVKL

Samples

Sample ID Description Type Environment
1 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
2 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
3 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
4 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
5 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
6 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
7 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
8 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
9 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
10 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
11 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
12 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
13 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
14 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
15 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
16 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
17 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
18 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
19 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
20 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
21 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
22 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
23 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
24 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
25 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
26 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
27 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
28 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
29 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
30 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
31 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
32 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
33 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
34 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
35 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
36 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
37 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
38 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
39 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
40 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
41 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
42 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
43 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
44 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
45 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
46 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
47 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
50 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
51 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
52 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
53 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
54 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
55 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
56 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
57 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
58 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
73 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
81 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
82 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
83 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
84 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
85 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
87 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
93 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
95 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
136 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
140 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
141 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
142 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
143 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
144 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
145 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
146 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
147 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
148 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
149 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
150 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
151 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
152 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
153 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
154 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
155 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
156 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
157 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
158 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
159 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
160 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
161 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
162 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
163 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
164 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
165 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
166 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
167 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
168 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
169 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
170 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
171 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
172 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
173 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
174 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
175 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
176 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
177 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
178 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
179 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
180 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
181 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
182 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
183 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
184 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
185 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
186 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
187 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
188 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
189 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
190 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
191 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
192 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
193 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
194 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
195 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
196 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
198 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
199 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
200 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
201 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
202 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
203 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
204 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
205 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
206 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
207 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
208 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
209 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
210 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
211 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
212 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
213 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
214 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
215 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
216 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
217 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
218 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
219 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
220 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
221 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
222 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
223 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
224 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
225 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
226 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
227 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.79
Metatranscriptomes 0.89
Isolates 5.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.72
Nodule 0
Rhizoplane 1.78
Rhizosphere 73.96
Stem 0
Stem Tuber 0
Unclassified 11.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10010399 3300001989 Bacteria 3456
2 JGI24737J22298_10003561 3300001990 Bacteria 5491
3 JGI24735J21928_10008209 3300002067 Bacteria 3386
4 JGI24738J21930_10000173 3300002075 Bacteria 16437
5 JGI24749J21850_1000162 3300002076 Bacteria 10665
6 JGI24034J26672_10005535 3300002239 Bacteria 1811
7 JGI25165J46597_1000012 3300003214 Bacteria 421074
8 JGI25165J46597_1000216 3300003214 Bacteria 81261
9 Ga0055524_1000180 3300003775 Bacteria 71495
10 Ga0055536_1001142 3300003781 Bacteria 16627
11 Ga0055530_10000080 3300003791 Bacteria 82772
12 Ga0055530_10000095 3300003791 Bacteria 74707
13 Ga0055531_10000028 3300003794 Bacteria 159590
14 Ga0065165_1001188 3300005262 Bacteria 30132
15 Ga0065165_1001406 3300005262 Bacteria 26221
16 Ga0065707_10084020 3300005295 Bacteria 7804
17 Ga0070658_10000428 3300005327 Bacteria 36510
18 Ga0070676_10000021 3300005328 Bacteria 47295
19 Ga0070683_100063507 3300005329 Bacteria 3435
20 Ga0070670_100000005 3300005331 Bacteria 351569
21 Ga0068869_100000913 3300005334 Bacteria 16999
22 Ga0070680_100115466 3300005336 Bacteria 2237
23 Ga0068868_100000098 3300005338 Bacteria 54070
24 Ga0070660_100004789 3300005339 Bacteria 9359
25 Ga0070660_100011555 3300005339 Bacteria 6283
26 Ga0070660_100140390 3300005339 Bacteria 1938
27 Ga0070668_100000006 3300005347 Bacteria 176486
28 Ga0070668_100009210 3300005347 Bacteria 7321
29 Ga0070669_100000057 3300005353 Bacteria 110803
30 Ga0070675_100009493 3300005354 Bacteria 7572
31 Ga0070673_100000003 3300005364 Bacteria 216759
32 Ga0070667_100000003 3300005367 Bacteria 447715
33 Ga0070667_100000098 3300005367 Bacteria 108706
34 Ga0070667_100002262 3300005367 Bacteria 16956
35 Ga0070663_100042764 3300005455 Bacteria 3185
36 Ga0070662_100048213 3300005457 Bacteria 3068
37 Ga0068867_100000001 3300005459 Bacteria 427563
38 Ga0068855_100000253 3300005563 Bacteria 67247
39 Ga0068855_100009507 3300005563 Bacteria 11741
40 Ga0068857_100145559 3300005577 Bacteria 2144
41 Ga0068854_100034791 3300005578 Bacteria 3522
42 Ga0068854_100051383 3300005578 Bacteria 2953
43 Ga0068854_100066954 3300005578 Bacteria 2615
44 Ga0068854_100079838 3300005578 Bacteria 2413
45 Ga0068856_100044712 3300005614 Bacteria 4359
46 Ga0068852_100000432 3300005616 Bacteria 27854
47 Ga0068852_100231703 3300005616 Bacteria 1761
48 Ga0068859_100039937 3300005617 Bacteria 4710
49 Ga0068859_100411413 3300005617 Bacteria 1449
50 Ga0068864_100000011 3300005618 Bacteria 350056
51 Ga0068864_100095406 3300005618 Bacteria 2630
52 Ga0068861_100057535 3300005719 Bacteria 2970
53 Ga0068861_100059732 3300005719 Bacteria 2920
54 Ga0068863_100049511 3300005841 Bacteria 3984
55 Ga0068863_100162718 3300005841 Bacteria 2139
56 Ga0068858_100002855 3300005842 Bacteria 17365
57 Ga0068858_100004181 3300005842 Bacteria 14205
58 Ga0068860_100000068 3300005843 Bacteria 179208
59 Ga0068860_100000164 3300005843 Bacteria 108706
60 Ga0068860_100005064 3300005843 Bacteria 13404
61 Ga0068862_100000011 3300005844 Bacteria 270105
62 Ga0068862_100000160 3300005844 Bacteria 74917
63 Ga0068862_100000179 3300005844 Bacteria 69539
64 Ga0068865_100000011 3300006881 Bacteria 154581
65 Ga0097620_100039937 3300006931 Bacteria 4710
66 Ga0097620_100411413 3300006931 Bacteria 1449
67 Ga0105240_10054637 3300009093 Bacteria 5004
68 Ga0105240_10306572 3300009093 Bacteria 1815
69 Ga0105245_10000157 3300009098 Bacteria 64143
70 Ga0105245_10003985 3300009098 Bacteria 13132
71 Ga0105245_10108397 3300009098 Bacteria 2579
72 Ga0105247_10030504 3300009101 Bacteria 3268
73 Ga0105243_10000042 3300009148 Bacteria 159276
74 Ga0105242_10000294 3300009176 Bacteria 39673
75 Ga0105248_10000406 3300009177 Bacteria 49988
76 Ga0105248_10005723 3300009177 Bacteria 13646
77 Ga0105248_10010191 3300009177 Bacteria 10351
78 Ga0105248_10014837 3300009177 Bacteria 8582
79 Ga0105248_10041678 3300009177 Bacteria 5147
80 Ga0105237_10074575 3300009545 Bacteria 3385
81 Ga0105237_10094950 3300009545 Bacteria 2971
82 Ga0105238_10017223 3300009551 Bacteria 7341
83 Ga0105238_10273158 3300009551 Bacteria 1671
84 Ga0105249_10000004 3300009553 Bacteria 368014
85 Ga0105249_10238508 3300009553 Bacteria 1797
86 Ga0105239_10000742 3300010375 Bacteria 46371
87 Ga0105246_10000049 3300011119 Bacteria 46856
88 Ga0157326_1000284 3300012513 Bacteria 5914
89 Ga0157373_10003233 3300013100 Bacteria 12319
90 Ga0157373_10062283 3300013100 Bacteria 2642
91 Ga0157370_10000008 3300013104 Bacteria 240668
92 Ga0157369_10050393 3300013105 Bacteria 4510
93 Ga0157378_10000425 3300013297 Bacteria 41258
94 Ga0157378_10056713 3300013297 Bacteria 3491
95 Ga0163162_10020509 3300013306 Bacteria 6494
96 Ga0157372_10082203 3300013307 Bacteria 3646
97 Ga0157372_10192923 3300013307 Bacteria 2359
98 Ga0157375_10001834 3300013308 Bacteria 18250
99 Ga0157380_10000031 3300014326 Bacteria 90245
100 Ga0157376_10000072 3300014969 Bacteria 77631
101 Ga0163161_10214987 3300017792 Bacteria 1486
102 Ga0213875_10000077 3300021388 Bacteria 116884
103 Ga0209026_1002235 3300025250 Bacteria 7449
104 Ga0209148_1000117 3300025254 Bacteria 188938
105 Ga0209233_1000058 3300025261 Bacteria 421872
106 Ga0209233_1000079 3300025261 Bacteria 346944
107 Ga0209565_1000012 3300025263 Bacteria 606500
108 Ga0209455_1004088 3300025272 Bacteria 4910
109 Ga0209673_1004195 3300025273 Bacteria 7866
110 Ga0209675_1015227 3300025291 Bacteria 2296
111 Ga0209676_1000362 3300025292 Bacteria 85770
112 Ga0209758_1003924 3300025297 Bacteria 12969
113 Ga0209050_1000010 3300025298 Bacteria 980454
114 Ga0209050_1000728 3300025298 Bacteria 47923
115 Ga0209050_1004469 3300025298 Bacteria 9419
116 Ga0209050_1011814 3300025298 Bacteria 4088
117 Ga0209256_1000012 3300025299 Bacteria 790371
118 Ga0209257_1000009 3300025304 Bacteria 1205047
119 Ga0209257_1000487 3300025304 Bacteria 71315
120 Ga0209257_1000695 3300025304 Bacteria 52248
121 Ga0207710_10026858 3300025900 Bacteria 2489
122 Ga0207680_10057412 3300025903 Bacteria 2355
123 Ga0207647_10000200 3300025904 Bacteria 48906
124 Ga0207645_10000395 3300025907 Bacteria 35956
125 Ga0207705_10000144 3300025909 Bacteria 76661
126 Ga0207705_10000911 3300025909 Bacteria 24202
127 Ga0207705_10004361 3300025909 Bacteria 10700
128 Ga0207695_10063114 3300025913 Bacteria 3820
129 Ga0207671_10002043 3300025914 Bacteria 22165
130 Ga0207671_10147269 3300025914 Bacteria 1817
131 Ga0207660_10227128 3300025917 Bacteria 1467
132 Ga0207657_10003388 3300025919 Bacteria 17048
133 Ga0207657_10016340 3300025919 Bacteria 7161
134 Ga0207652_10052640 3300025921 Bacteria 3495
135 Ga0207681_10000001 3300025923 Bacteria 1105841
136 Ga0207681_10042167 3300025923 Bacteria 3047
137 Ga0207650_10000018 3300025925 Bacteria 352120
138 Ga0207650_10002940 3300025925 Bacteria 11754
139 Ga0207659_10066601 3300025926 Bacteria 2614
140 Ga0207687_10000354 3300025927 Bacteria 30554
141 Ga0207687_10004882 3300025927 Bacteria 8910
142 Ga0207644_10000124 3300025931 Bacteria 56579
143 Ga0207706_10002192 3300025933 Bacteria 19026
144 Ga0207706_10006864 3300025933 Bacteria 10524
145 Ga0207706_10015824 3300025933 Bacteria 6820
146 Ga0207706_10052807 3300025933 Bacteria 3588
147 Ga0207706_10354390 3300025933 Bacteria 1276
148 Ga0207686_10000312 3300025934 Bacteria 35056
149 Ga0207709_10000119 3300025935 Bacteria 121452
150 Ga0207704_10000001 3300025938 Bacteria 716296
151 Ga0207691_10101397 3300025940 Bacteria 2569
152 Ga0207691_10147040 3300025940 Bacteria 2074
153 Ga0207711_10000382 3300025941 Bacteria 46910
154 Ga0207711_10005635 3300025941 Bacteria 10582
155 Ga0207711_10026316 3300025941 Bacteria 4880
156 Ga0207711_10060512 3300025941 Bacteria 3264
157 Ga0207689_10002518 3300025942 Bacteria 17021
158 Ga0207661_10025550 3300025944 Bacteria 4491
159 Ga0207667_10000035 3300025949 Bacteria 301056
160 Ga0207667_10004593 3300025949 Bacteria 16933
161 Ga0207651_10000002 3300025960 Bacteria 427663
162 Ga0207712_10000008 3300025961 Bacteria 527957
163 Ga0207712_10187109 3300025961 Bacteria 1631
164 Ga0207668_10000026 3300025972 Bacteria 128309
165 Ga0207668_10031012 3300025972 Bacteria 3517
166 Ga0207640_10001078 3300025981 Bacteria 15115
167 Ga0207640_10004245 3300025981 Bacteria 7759
168 Ga0207640_10056808 3300025981 Bacteria 2572
169 Ga0207640_10058601 3300025981 Bacteria 2538
170 Ga0207658_10000002 3300025986 Bacteria 1364188
171 Ga0207658_10000196 3300025986 Bacteria 63933
172 Ga0207658_10001654 3300025986 Bacteria 17013
173 Ga0207677_10000042 3300026023 Bacteria 110706
174 Ga0207703_10001489 3300026035 Bacteria 21371
175 Ga0207703_10002076 3300026035 Bacteria 17618
176 Ga0207703_10020274 3300026035 Bacteria 5199
177 Ga0207678_10012180 3300026067 Bacteria 7556
178 Ga0207678_10019712 3300026067 Bacteria 5932
179 Ga0207678_10085349 3300026067 Bacteria 2699
180 Ga0207702_10004463 3300026078 Bacteria 12435
181 Ga0207702_10109660 3300026078 Bacteria 2451
182 Ga0207641_10000607 3300026088 Bacteria 39350
183 Ga0207641_10008306 3300026088 Bacteria 8579
184 Ga0207641_10159695 3300026088 Bacteria 2048
185 Ga0207648_10000001 3300026089 Bacteria 427499
186 Ga0207676_10000004 3300026095 Bacteria 725417
187 Ga0207676_10000971 3300026095 Bacteria 22156
188 Ga0207674_10037978 3300026116 Bacteria 5002
189 Ga0207675_100094084 3300026118 Bacteria 2819
190 Ga0207698_10000173 3300026142 Bacteria 40043
191 Ga0209974_10013576 3300027876 Bacteria 2713
192 Ga0268266_10000002 3300028379 Bacteria 3059047
193 Ga0268265_10000002 3300028380 Bacteria 1035381
194 Ga0268265_10000199 3300028380 Bacteria 69539
195 Ga0268265_10001260 3300028380 Bacteria 21840
196 Ga0268264_10000103 3300028381 Bacteria 222439
197 Ga0268264_10000228 3300028381 Bacteria 108722
198 Ga0268264_10000936 3300028381 Bacteria 30266
199 Ga0307513_10057153 3300031456 Bacteria 4159
200 Ga0307408_100020671 3300031548 Bacteria 4446
201 Ga0307408_100119627 3300031548 Bacteria 2038
202 Ga0307508_10025727 3300031616 Bacteria 5334
203 Ga0307405_10082944 3300031731 Bacteria 2100
204 Ga0307409_100205522 3300031995 Bacteria 1765
205 Ga0307416_100137528 3300032002 Bacteria 2213
206 Ga0307414_10001394 3300032004 Bacteria 12521
207 Ga0307414_10001763 3300032004 Bacteria 11217
208 Ga0307414_10051430 3300032004 Bacteria 2860
209 Ga0307414_10105121 3300032004 Bacteria 2134
210 Ga0307414_10300611 3300032004 Bacteria 1357
211 Ga0307411_10020951 3300032005 Bacteria 3814
212 Ga0307415_100013397 3300032126 Bacteria 4787
213 Ga0307510_10004800 3300033180 Bacteria 15995
214 Ga0395899_0002039 3300037312 Bacteria 16633
215 Ga0395899_0042812 3300037312 Bacteria 3378
216 Ga0395899_0046341 3300037312 Bacteria 3238
217 Ga0395900_0020859 3300037418 Bacteria 6695
218 Ga0395900_0058520 3300037418 Bacteria 3967
219 Ga0395900_0127719 3300037418 Bacteria 2606
220 Ga0395898_0069633 3300037466 Bacteria 3403
221 Ga0395905_0025603 3300037471 Bacteria 5563
222 Ga0395905_0029082 3300037471 Bacteria 5208
223 Ga0395905_0088789 3300037471 Bacteria 2897
224 Ga0395905_0220007 3300037471 Bacteria 1777
225 Ga0395905_0260229 3300037471 Bacteria 1620
226 Ga0436364_0024756 3300037853 Bacteria 185423
227 Ga0395901_0214304 3300038443 Bacteria 2014
228 Ga0395901_0239643 3300038443 Bacteria 1892
229 Ga0439465_0009320 3300041413 Bacteria 3093
230 Ga0451802_0237599 3300041460 Bacteria 1838
231 Ga0451806_469611 3300041462 Bacteria 2311
232 Ga0439431_0008050 3300041997 Bacteria 2362
233 Ga0439432_010322 3300042006 Bacteria 3238
234 Ga0439455_0005335 3300042012 Bacteria 2604
235 Ga0439446_0016515 3300042156 Bacteria 2057
236 Ga0439458_0005558 3300042157 Bacteria 2833
237 Ga0466961_0120497 3300044693 Bacteria 1647
238 Ga0466963_0052306 3300044694 Bacteria 2710
239 Ga0466968_0042287 3300044735 Bacteria 1926
240 Ga0466960_0012813 3300044901 Bacteria 3548
241 Ga0466959_0080427 3300045049 Bacteria 2349
242 Ga0495638_0006452 3300046460 Bacteria 8533
243 Ga0495583_0009903 3300046506 Bacteria 5637
244 Ga0495606_0111170 3300046507 Bacteria 1652
245 Ga0495668_0000001 3300046616 Bacteria 1013420
246 Ga0495668_0032457 3300046616 Bacteria 2938
247 Ga0495625_0005243 3300046660 Bacteria 11925
248 Ga0495625_0028506 3300046660 Bacteria 4187
249 Ga0495669_0053965 3300046684 Bacteria 1808
250 Ga0495670_0023583 3300046691 Bacteria 3037
251 Ga0495681_0033688 3300047470 Bacteria 2561
252 Ga0495686_0004398 3300047472 Bacteria 11610
253 Ga0495686_0011193 3300047472 Bacteria 6329
254 Ga0495686_0046813 3300047472 Bacteria 2733
255 Ga0496102_0000120 3300048905 Bacteria 112432
256 Ga0496103_0035948 3300048906 Bacteria 3032
257 Ga0496116_0101017 3300048919 Bacteria 1723
258 Ga0496117_0000317 3300048920 Bacteria 84472
259 Ga0496117_0066255 3300048920 Bacteria 2451
260 Ga0496117_0133946 3300048920 Bacteria 1496
261 Ga0496118_0000303 3300048921 Bacteria 85332
262 Ga0496118_0002976 3300048921 Bacteria 21913
263 Ga0496118_0045984 3300048921 Bacteria 3400
264 Ga0496118_0068316 3300048921 Bacteria 2582
265 Ga0496119_0066055 3300048922 Bacteria 2139
266 Ga0496120_0031207 3300048923 Bacteria 3230
267 Ga0496121_0000296 3300048924 Bacteria 103215
268 Ga0496121_0004304 3300048924 Bacteria 19288
269 Ga0496121_0094005 3300048924 Bacteria 2333
270 Ga0496121_0186580 3300048924 Bacteria 1491
271 Ga0496122_0002027 3300048925 Bacteria 30082
272 Ga0496122_0037607 3300048925 Bacteria 3893
273 Ga0496123_0007923 3300048926 Bacteria 9866
274 Ga0496124_0000214 3300048927 Bacteria 113007
275 Ga0496124_0000684 3300048927 Bacteria 55763
276 Ga0496124_0028052 3300048927 Bacteria 5039
277 Ga0496124_0179126 3300048927 Bacteria 1633
278 Ga0496125_0020684 3300048928 Bacteria 6171
279 Ga0496126_0075599 3300048929 Bacteria 2989
280 Ga0501306_004690 3300049127 Bacteria 1541
281 Ga0501305_003099 3300049161 Bacteria 1859
282 Ga0501307_002104 3300049162 Bacteria 1812
283 Ga0501290_002972 3300049513 Bacteria 2156
284 Ga0501292_000545 3300049515 Bacteria 4666
285 Ga0501294_000153 3300049517 Bacteria 8220
286 Ga0501032_0011625 3300049569 Bacteria 6312
287 Ga0501043_0147398 3300049579 Bacteria 1842
288 Ga0501047_0009249 3300049581 Bacteria 9305
289 Ga0501202_004646 3300049652 Bacteria 2407
290 Ga0501206_000949 3300049653 Bacteria 3589
291 Ga0501222_000934 3300049662 Bacteria 4204
292 Ga0501223_006338 3300049663 Bacteria 2449
293 Ga0501227_001938 3300049665 Bacteria 4598
294 Ga0501235_002297 3300049669 Bacteria 4113
295 Ga0501257_000040 3300049686 Bacteria 36614
296 Ga0501259_001110 3300049688 Bacteria 4492
297 Ga0501261_000579 3300049690 Bacteria 4647
298 Ga0501279_000030 3300049775 Bacteria 37693
299 Ga0501280_000040 3300049776 Bacteria 38251
300 Ga0501281_00057 3300049777 Bacteria 13168
301 Ga0501282_000214 3300049778 Bacteria 7167
302 Ga0501044_0062937 3300049823 Bacteria 3791
303 Ga0500643_000113 3300053087 Bacteria 84494
304 Ga0500643_001256 3300053087 Bacteria 15014
305 Ga0500643_008947 3300053087 Bacteria 3875
306 Ga0500651_0055391 3300053093 Bacteria 2484
307 Ga0500651_0158433 3300053093 Bacteria 1355
308 Ga0500566_0016727 3300053094 Bacteria 4305
309 Ga0500655_002259 3300053133 Bacteria 3538
310 Ga0500658_0000967 3300053134 Bacteria 11730
311 Ga0500573_0000045 3300053140 Bacteria 98878
312 Ga0500590_002600 3300053148 Bacteria 8083
313 Ga0500604_0041921 3300053151 Bacteria 1386
314 Ga0500616_0003989 3300053153 Bacteria 10781
315 Ga0500624_000043 3300053157 Bacteria 90095
316 Ga0500627_0000005 3300053158 Bacteria 167950
317 Ga0500627_0000209 3300053158 Bacteria 16882
318 Ga0500637_0001605 3300053178 Bacteria 9695
319 Ga0500570_000021 3300053724 Bacteria 41025
320 Ga0466962_0002546 3300061719 Bacteria 8651

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028379 Ga0268266_10000002 Ga0268266_100000021920 322
2 3300053140 Ga0500573_0000045 Ga0500573_0000045_86998_88080 322
3 3300053157 Ga0500624_000043 Ga0500624_000043_82919_83974 322
4 3300053178 Ga0500637_0001605 Ga0500637_0001605_3407_4462 322
5 3300005262 Ga0065165_1001406 Ga0065165_100140611 323
6 3300009177 Ga0105248_10014837 Ga0105248_100148371 323
7 3300046616 Ga0495668_0032457 Ga0495668_0032457_779_1837 323
8 3300053087 Ga0500643_008947 Ga0500643_008947_383_1441 323
9 3300003781 Ga0055536_1001142 Ga0055536_10011422 324
10 3300003791 Ga0055530_10000095 Ga0055530_100000951 324
11 3300005617 Ga0068859_100411413 Ga0068859_1004114132 324
12 3300005719 Ga0068861_100057535 Ga0068861_1000575351 324
13 3300005842 Ga0068858_100004181 Ga0068858_10000418116 324
14 3300005843 Ga0068860_100000068 Ga0068860_10000006828 324
15 3300006931 Ga0097620_100411413 Ga0097620_1004114132 324
16 3300009177 Ga0105248_10000406 Ga0105248_1000040639 324
17 3300012513 Ga0157326_1000284 Ga0157326_10002845 324
18 3300014326 Ga0157380_10000031 Ga0157380_1000003157 324
19 3300025298 Ga0209050_1004469 Ga0209050_10044691 324
20 3300025304 Ga0209257_1000487 Ga0209257_100048769 324
21 3300025925 Ga0207650_10002940 Ga0207650_1000294013 324
22 3300025931 Ga0207644_10000124 Ga0207644_1000012448 324
23 3300025972 Ga0207668_10000026 Ga0207668_1000002614 324
24 3300025986 Ga0207658_10000002 Ga0207658_100000021058 324
25 3300026035 Ga0207703_10020274 Ga0207703_100202742 324
26 3300028380 Ga0268265_10001260 Ga0268265_100012605 324
27 3300028381 Ga0268264_10000103 Ga0268264_1000010374 324
28 3300031548 Ga0307408_100020671 Ga0307408_1000206712 324
29 3300049127 Ga0501306_004690 Ga0501306_004690_291_1352 324
30 3300049161 Ga0501305_003099 Ga0501305_003099_190_1251 324
31 3300049162 Ga0501307_002104 Ga0501307_002104_602_1663 324
32 3300049569 Ga0501032_0011625 Ga0501032_0011625_4587_5651 324
33 3300049579 Ga0501043_0147398 Ga0501043_0147398_271_1335 324
34 3300049581 Ga0501047_0009249 Ga0501047_0009249_394_1458 324
35 3300053093 Ga0500651_0055391 Ga0500651_0055391_686_1747 324
36 3300053133 Ga0500655_002259 Ga0500655_002259_853_1914 324
37 3300053148 Ga0500590_002600 Ga0500590_002600_3616_4677 324
38 3300053158 Ga0500627_0000209 Ga0500627_0000209_1523_2584 324
39 3300053724 Ga0500570_000021 Ga0500570_000021_39865_40926 324
40 3300041460 Ga0451802_0237599 Ga0451802_0237599_690_1775 332
41 3300048924 Ga0496121_0094005 Ga0496121_0094005_926_2026 337
42 3300049686 Ga0501257_000040 Ga0501257_000040_27242_28390 353
43 3300026067 Ga0207678_10085349 Ga0207678_100853492 355
44 3300049690 Ga0501261_000579 Ga0501261_000579_683_1903 356
45 3300037853 Ga0436364_0024756 Ga0436364_0024756_120501_121673 361
46 iso_pu_bacteria 2582581305 2585260434 363
47 iso_pu_bacteria 2643221541 2643731537 363
48 iso_pu_bacteria 2643221560 2643821639 363
49 iso_pu_bacteria 2643221563 2643835793 363
50 iso_pu_bacteria 2643221605 2644036714 363
51 iso_pu_bacteria 2643221606 2644042135 363
52 iso_pu_bacteria 2643221608 2644056719 363
53 iso_pu_bacteria 2643221671 2644394222 363
54 iso_pu_bacteria 2852653556 2852655400 363
55 iso_pu_bacteria 2852680915 2852681758 363
56 3300009098 Ga0105245_10108397 Ga0105245_101083972 365
57 3300049513 Ga0501290_002972 Ga0501290_002972_578_1825 365
58 3300049515 Ga0501292_000545 Ga0501292_000545_670_1917 365
59 3300049517 Ga0501294_000153 Ga0501294_000153_6696_7943 365
60 3300049652 Ga0501202_004646 Ga0501202_004646_265_1512 365
61 3300049653 Ga0501206_000949 Ga0501206_000949_397_1644 365
62 3300049662 Ga0501222_000934 Ga0501222_000934_559_1806 365
63 3300049663 Ga0501223_006338 Ga0501223_006338_559_1806 365
64 3300049665 Ga0501227_001938 Ga0501227_001938_2839_4086 365
65 3300049669 Ga0501235_002297 Ga0501235_002297_468_1715 365
66 3300049688 Ga0501259_001110 Ga0501259_001110_588_1835 365
67 3300049775 Ga0501279_000030 Ga0501279_000030_533_1780 365
68 3300049776 Ga0501280_000040 Ga0501280_000040_610_1857 365
69 3300049777 Ga0501281_00057 Ga0501281_00057_537_1784 365
70 3300049778 Ga0501282_000214 Ga0501282_000214_5395_6642 365
71 3300025941 Ga0207711_10060512 Ga0207711_100605121 366
72 3300025972 Ga0207668_10031012 Ga0207668_100310124 366
73 3300032004 Ga0307414_10001763 Ga0307414_100017638 366
74 3300032004 Ga0307414_10105121 Ga0307414_101051212 366
75 3300037471 Ga0395905_0260229 Ga0395905_0260229_308_1495 366
76 3300046684 Ga0495669_0053965 Ga0495669_0053965_155_1342 366
77 3300002076 JGI24749J21850_1000162 JGI24749J21850_100016213 367
78 3300005295 Ga0065707_10084020 Ga0065707_1008402010 367
79 3300005331 Ga0070670_100000005 Ga0070670_100000005200 367
80 3300005339 Ga0070660_100140390 Ga0070660_1001403902 367
81 3300005347 Ga0070668_100000006 Ga0070668_10000000676 367
82 3300005353 Ga0070669_100000057 Ga0070669_10000005752 367
83 3300005367 Ga0070667_100000003 Ga0070667_100000003156 367
84 3300005367 Ga0070667_100000098 Ga0070667_10000009815 367
85 3300005367 Ga0070667_100002262 Ga0070667_10000226217 367
86 3300005563 Ga0068855_100009507 Ga0068855_1000095073 367
87 3300005578 Ga0068854_100066954 Ga0068854_1000669542 367
88 3300005617 Ga0068859_100039937 Ga0068859_1000399372 367
89 3300005618 Ga0068864_100000011 Ga0068864_100000011198 367
90 3300005618 Ga0068864_100095406 Ga0068864_1000954062 367
91 3300005719 Ga0068861_100059732 Ga0068861_1000597323 367
92 3300005841 Ga0068863_100049511 Ga0068863_1000495113 367
93 3300005841 Ga0068863_100162718 Ga0068863_1001627182 367
94 3300005843 Ga0068860_100000164 Ga0068860_10000016415 367
95 3300005843 Ga0068860_100005064 Ga0068860_1000050643 367
96 3300005844 Ga0068862_100000011 Ga0068862_10000001137 367
97 3300005844 Ga0068862_100000160 Ga0068862_1000001603 367
98 3300005844 Ga0068862_100000179 Ga0068862_10000017955 367
99 3300006931 Ga0097620_100039937 Ga0097620_1000399372 367
100 3300009093 Ga0105240_10054637 Ga0105240_100546377 367
101 3300009101 Ga0105247_10030504 Ga0105247_100305042 367
102 3300009177 Ga0105248_10010191 Ga0105248_100101915 367
103 3300009545 Ga0105237_10074575 Ga0105237_100745753 367
104 3300009553 Ga0105249_10000004 Ga0105249_1000000453 367
105 3300010375 Ga0105239_10000742 Ga0105239_1000074211 367
106 3300025292 Ga0209676_1000362 Ga0209676_10003621 367
107 3300025298 Ga0209050_1000728 Ga0209050_100072843 367
108 3300025304 Ga0209257_1000695 Ga0209257_100069516 367
109 3300025900 Ga0207710_10026858 Ga0207710_100268582 367
110 3300025903 Ga0207680_10057412 Ga0207680_100574122 367
111 3300025913 Ga0207695_10063114 Ga0207695_100631142 367
112 3300025914 Ga0207671_10002043 Ga0207671_1000204322 367
113 3300025917 Ga0207660_10227128 Ga0207660_102271281 367
114 3300025923 Ga0207681_10000001 Ga0207681_10000001461 367
115 3300025925 Ga0207650_10000018 Ga0207650_10000018198 367
116 3300025933 Ga0207706_10354390 Ga0207706_103543901 367
117 3300025941 Ga0207711_10000382 Ga0207711_1000038228 367
118 3300025941 Ga0207711_10005635 Ga0207711_100056355 367
119 3300025949 Ga0207667_10004593 Ga0207667_100045933 367
120 3300025961 Ga0207712_10000008 Ga0207712_10000008183 367
121 3300025981 Ga0207640_10004245 Ga0207640_100042455 367
122 3300025986 Ga0207658_10000196 Ga0207658_1000019615 367
123 3300025986 Ga0207658_10001654 Ga0207658_100016544 367
124 3300026088 Ga0207641_10000607 Ga0207641_100006073 367
125 3300026088 Ga0207641_10008306 Ga0207641_100083065 367
126 3300026088 Ga0207641_10159695 Ga0207641_101596952 367
127 3300026095 Ga0207676_10000004 Ga0207676_10000004591 367
128 3300026118 Ga0207675_100094084 Ga0207675_1000940843 367
129 3300027876 Ga0209974_10013576 Ga0209974_100135762 367
130 3300028380 Ga0268265_10000002 Ga0268265_10000002478 367
131 3300028380 Ga0268265_10000199 Ga0268265_1000019954 367
132 3300028381 Ga0268264_10000228 Ga0268264_1000022899 367
133 3300028381 Ga0268264_10000936 Ga0268264_1000093632 367
134 3300031456 Ga0307513_10057153 Ga0307513_100571533 367
135 3300032004 Ga0307414_10001394 Ga0307414_100013949 367
136 3300044735 Ga0466968_0042287 Ga0466968_0042287_578_1768 367
137 3300046616 Ga0495668_0000001 Ga0495668_0000001_796891_798084 367
138 3300046660 Ga0495625_0005243 Ga0495625_0005243_6183_7376 367
139 3300047472 Ga0495686_0004398 Ga0495686_0004398_9578_10768 367
140 3300048924 Ga0496121_0004304 Ga0496121_0004304_6504_7694 367
141 3300048929 Ga0496126_0075599 Ga0496126_0075599_1424_2614 367
142 3300049823 Ga0501044_0062937 Ga0501044_0062937_1020_2210 367
143 3300053087 Ga0500643_000113 Ga0500643_000113_5790_6980 367
144 3300053151 Ga0500604_0041921 Ga0500604_0041921_45_1235 367
145 3300053158 Ga0500627_0000005 Ga0500627_0000005_128660_129853 367
146 3300048919 Ga0496116_0101017 Ga0496116_0101017_432_1631 370
147 iso_pu_bacteria 2599185354 2600202481 373
148 iso_pu_bacteria 2751185897 2753764274 373
149 iso_pu_bacteria 8057101203 8057103146 373
150 3300053093 Ga0500651_0158433 Ga0500651_0158433_114_1325 374
151 iso_pu_bacteria 2879163058 2879166482 374
152 3300013100 Ga0157373_10003233 Ga0157373_100032334 375
153 3300025921 Ga0207652_10052640 Ga0207652_100526402 375
154 3300025933 Ga0207706_10002192 Ga0207706_100021926 375
155 iso_pu_bacteria 2599185359 2600227790 375
156 iso_pu_bacteria 2818991466 2819714222 375
157 iso_pu_bacteria 2928526807 2928530438 375
158 iso_pu_bacteria 2928968154 2928968234 375
159 3300017792 Ga0163161_10214987 Ga0163161_102149871 376
160 3300031548 Ga0307408_100119627 Ga0307408_1001196272 376
161 3300032002 Ga0307416_100137528 Ga0307416_1001375282 376
162 3300032004 Ga0307414_10300611 Ga0307414_103006111 376
163 3300032126 Ga0307415_100013397 Ga0307415_1000133975 376
164 3300037418 Ga0395900_0058520 Ga0395900_0058520_1062_2279 376
165 3300038443 Ga0395901_0214304 Ga0395901_0214304_710_1927 376
166 3300048920 Ga0496117_0133946 Ga0496117_0133946_157_1395 376
167 3300048921 Ga0496118_0002976 Ga0496118_0002976_20113_21351 376
168 3300048924 Ga0496121_0000296 Ga0496121_0000296_9765_10982 376
169 3300048927 Ga0496124_0179126 Ga0496124_0179126_300_1538 376
170 3300003214 JGI25165J46597_1000012 JGI25165J46597_1000012406 377
171 3300005329 Ga0070683_100063507 Ga0070683_1000635074 377
172 3300005336 Ga0070680_100115466 Ga0070680_1001154662 377
173 3300005339 Ga0070660_100011555 Ga0070660_1000115553 377
174 3300005842 Ga0068858_100002855 Ga0068858_10000285514 377
175 3300009098 Ga0105245_10003985 Ga0105245_1000398510 377
176 3300009177 Ga0105248_10005723 Ga0105248_100057235 377
177 3300009551 Ga0105238_10273158 Ga0105238_102731581 377
178 3300013297 Ga0157378_10056713 Ga0157378_100567132 377
179 3300013306 Ga0163162_10020509 Ga0163162_100205092 377
180 3300021388 Ga0213875_10000077 Ga0213875_1000007786 377
181 3300025261 Ga0209233_1000058 Ga0209233_100005812 377
182 3300025919 Ga0207657_10016340 Ga0207657_100163404 377
183 3300025927 Ga0207687_10004882 Ga0207687_100048822 377
184 3300025941 Ga0207711_10026316 Ga0207711_100263165 377
185 3300025944 Ga0207661_10025550 Ga0207661_100255504 377
186 3300026035 Ga0207703_10001489 Ga0207703_1000148910 377
187 3300026035 Ga0207703_10002076 Ga0207703_100020766 377
188 3300026067 Ga0207678_10012180 Ga0207678_100121805 377
189 3300026095 Ga0207676_10000971 Ga0207676_1000097125 377
190 3300031616 Ga0307508_10025727 Ga0307508_100257274 377
191 3300033180 Ga0307510_10004800 Ga0307510_100048004 377
192 3300037312 Ga0395899_0042812 Ga0395899_0042812_1203_2423 377
193 3300037312 Ga0395899_0046341 Ga0395899_0046341_820_2040 377
194 3300037418 Ga0395900_0020859 Ga0395900_0020859_4484_5704 377
195 3300037418 Ga0395900_0127719 Ga0395900_0127719_477_1697 377
196 3300037466 Ga0395898_0069633 Ga0395898_0069633_967_2187 377
197 3300037471 Ga0395905_0025603 Ga0395905_0025603_1431_2651 377
198 3300046460 Ga0495638_0006452 Ga0495638_0006452_431_1651 377
199 3300046506 Ga0495583_0009903 Ga0495583_0009903_447_1667 377
200 3300046660 Ga0495625_0028506 Ga0495625_0028506_2448_3668 377
201 3300046691 Ga0495670_0023583 Ga0495670_0023583_1098_2321 377
202 3300047472 Ga0495686_0046813 Ga0495686_0046813_928_2148 377
203 3300053087 Ga0500643_001256 Ga0500643_001256_265_1485 377
204 3300005347 Ga0070668_100009210 Ga0070668_10000921010 378
205 3300009177 Ga0105248_10041678 Ga0105248_100416787 378
206 3300025923 Ga0207681_10042167 Ga0207681_100421672 378
207 3300031731 Ga0307405_10082944 Ga0307405_100829442 378
208 3300031995 Ga0307409_100205522 Ga0307409_1002055221 378
209 3300032004 Ga0307414_10051430 Ga0307414_100514303 378
210 3300032005 Ga0307411_10020951 Ga0307411_100209514 378
211 3300042157 Ga0439458_0005558 Ga0439458_0005558_266_1492 378
212 3300047470 Ga0495681_0033688 Ga0495681_0033688_1179_2402 378
213 3300048920 Ga0496117_0066255 Ga0496117_0066255_1108_2331 378
214 3300048924 Ga0496121_0186580 Ga0496121_0186580_10_1248 378
215 3300053134 Ga0500658_0000967 Ga0500658_0000967_10032_11255 378
216 3300001989 JGI24739J22299_10010399 JGI24739J22299_100103992 379
217 3300001990 JGI24737J22298_10003561 JGI24737J22298_100035612 379
218 3300002067 JGI24735J21928_10008209 JGI24735J21928_100082092 379
219 3300002075 JGI24738J21930_10000173 JGI24738J21930_100001733 379
220 3300002239 JGI24034J26672_10005535 JGI24034J26672_100055352 379
221 3300003214 JGI25165J46597_1000216 JGI25165J46597_100021612 379
222 3300003775 Ga0055524_1000180 Ga0055524_10001803 379
223 3300003791 Ga0055530_10000080 Ga0055530_1000008013 379
224 3300003794 Ga0055531_10000028 Ga0055531_10000028116 379
225 3300005262 Ga0065165_1001188 Ga0065165_100118811 379
226 3300005327 Ga0070658_10000428 Ga0070658_1000042831 379
227 3300005328 Ga0070676_10000021 Ga0070676_1000002127 379
228 3300005334 Ga0068869_100000913 Ga0068869_1000009138 379
229 3300005338 Ga0068868_100000098 Ga0068868_10000009834 379
230 3300005339 Ga0070660_100004789 Ga0070660_1000047892 379
231 3300005354 Ga0070675_100009493 Ga0070675_1000094932 379
232 3300005364 Ga0070673_100000003 Ga0070673_100000003122 379
233 3300005455 Ga0070663_100042764 Ga0070663_1000427642 379
234 3300005457 Ga0070662_100048213 Ga0070662_1000482132 379
235 3300005459 Ga0068867_100000001 Ga0068867_100000001148 379
236 3300005563 Ga0068855_100000253 Ga0068855_10000025358 379
237 3300005577 Ga0068857_100145559 Ga0068857_1001455592 379
238 3300005578 Ga0068854_100034791 Ga0068854_1000347913 379
239 3300005578 Ga0068854_100051383 Ga0068854_1000513833 379
240 3300005578 Ga0068854_100079838 Ga0068854_1000798381 379
241 3300005614 Ga0068856_100044712 Ga0068856_1000447122 379
242 3300005616 Ga0068852_100000432 Ga0068852_1000004326 379
243 3300005616 Ga0068852_100231703 Ga0068852_1002317032 379
244 3300006881 Ga0068865_100000011 Ga0068865_100000011100 379
245 3300009093 Ga0105240_10306572 Ga0105240_103065721 379
246 3300009098 Ga0105245_10000157 Ga0105245_1000015733 379
247 3300009148 Ga0105243_10000042 Ga0105243_10000042152 379
248 3300009176 Ga0105242_10000294 Ga0105242_1000029427 379
249 3300009545 Ga0105237_10094950 Ga0105237_100949502 379
250 3300009551 Ga0105238_10017223 Ga0105238_100172233 379
251 3300009553 Ga0105249_10238508 Ga0105249_102385082 379
252 3300011119 Ga0105246_10000049 Ga0105246_1000004916 379
253 3300013100 Ga0157373_10062283 Ga0157373_100622832 379
254 3300013104 Ga0157370_10000008 Ga0157370_10000008192 379
255 3300013105 Ga0157369_10050393 Ga0157369_100503933 379
256 3300013297 Ga0157378_10000425 Ga0157378_100004259 379
257 3300013307 Ga0157372_10082203 Ga0157372_100822033 379
258 3300013307 Ga0157372_10192923 Ga0157372_101929232 379
259 3300013308 Ga0157375_10001834 Ga0157375_100018347 379
260 3300014969 Ga0157376_10000072 Ga0157376_1000007289 379
261 3300025250 Ga0209026_1002235 Ga0209026_10022355 379
262 3300025254 Ga0209148_1000117 Ga0209148_1000117158 379
263 3300025261 Ga0209233_1000079 Ga0209233_1000079328 379
264 3300025263 Ga0209565_1000012 Ga0209565_1000012246 379
265 3300025272 Ga0209455_1004088 Ga0209455_10040883 379
266 3300025273 Ga0209673_1004195 Ga0209673_10041953 379
267 3300025291 Ga0209675_1015227 Ga0209675_10152271 379
268 3300025297 Ga0209758_1003924 Ga0209758_100392410 379
269 3300025298 Ga0209050_1000010 Ga0209050_1000010320 379
270 3300025298 Ga0209050_1011814 Ga0209050_10118144 379
271 3300025299 Ga0209256_1000012 Ga0209256_1000012437 379
272 3300025304 Ga0209257_1000009 Ga0209257_1000009794 379
273 3300025904 Ga0207647_10000200 Ga0207647_1000020014 379
274 3300025907 Ga0207645_10000395 Ga0207645_1000039524 379
275 3300025909 Ga0207705_10000144 Ga0207705_1000014413 379
276 3300025909 Ga0207705_10000911 Ga0207705_1000091111 379
277 3300025909 Ga0207705_10004361 Ga0207705_1000436110 379
278 3300025914 Ga0207671_10147269 Ga0207671_101472692 379
279 3300025919 Ga0207657_10003388 Ga0207657_100033889 379
280 3300025926 Ga0207659_10066601 Ga0207659_100666012 379
281 3300025927 Ga0207687_10000354 Ga0207687_100003549 379
282 3300025933 Ga0207706_10006864 Ga0207706_100068647 379
283 3300025933 Ga0207706_10015824 Ga0207706_100158243 379
284 3300025933 Ga0207706_10052807 Ga0207706_100528072 379
285 3300025934 Ga0207686_10000312 Ga0207686_1000031225 379
286 3300025935 Ga0207709_10000119 Ga0207709_1000011933 379
287 3300025938 Ga0207704_10000001 Ga0207704_10000001632 379
288 3300025940 Ga0207691_10101397 Ga0207691_101013971 379
289 3300025940 Ga0207691_10147040 Ga0207691_101470401 379
290 3300025942 Ga0207689_10002518 Ga0207689_1000251810 379
291 3300025949 Ga0207667_10000035 Ga0207667_10000035233 379
292 3300025960 Ga0207651_10000002 Ga0207651_10000002301 379
293 3300025961 Ga0207712_10187109 Ga0207712_101871091 379
294 3300025981 Ga0207640_10001078 Ga0207640_100010787 379
295 3300025981 Ga0207640_10056808 Ga0207640_100568083 379
296 3300025981 Ga0207640_10058601 Ga0207640_100586012 379
297 3300026023 Ga0207677_10000042 Ga0207677_1000004232 379
298 3300026067 Ga0207678_10019712 Ga0207678_100197122 379
299 3300026078 Ga0207702_10004463 Ga0207702_1000446311 379
300 3300026078 Ga0207702_10109660 Ga0207702_101096602 379
301 3300026089 Ga0207648_10000001 Ga0207648_10000001301 379
302 3300026116 Ga0207674_10037978 Ga0207674_100379782 379
303 3300026142 Ga0207698_10000173 Ga0207698_1000017313 379
304 3300037312 Ga0395899_0002039 Ga0395899_0002039_2693_3919 379
305 3300037471 Ga0395905_0029082 Ga0395905_0029082_3056_4282 379
306 3300037471 Ga0395905_0088789 Ga0395905_0088789_84_1310 379
307 3300037471 Ga0395905_0220007 Ga0395905_0220007_26_1252 379
308 3300038443 Ga0395901_0239643 Ga0395901_0239643_401_1627 379
309 3300041413 Ga0439465_0009320 Ga0439465_0009320_359_1585 379
310 3300041462 Ga0451806_469611 Ga0451806_469611_516_1742 379
311 3300041997 Ga0439431_0008050 Ga0439431_0008050_861_2087 379
312 3300042006 Ga0439432_010322 Ga0439432_010322_378_1604 379
313 3300042012 Ga0439455_0005335 Ga0439455_0005335_1338_2564 379
314 3300042156 Ga0439446_0016515 Ga0439446_0016515_330_1556 379
315 3300044693 Ga0466961_0120497 Ga0466961_0120497_184_1464 379
316 3300044694 Ga0466963_0052306 Ga0466963_0052306_944_2170 379
317 3300044901 Ga0466960_0012813 Ga0466960_0012813_1891_3171 379
318 3300045049 Ga0466959_0080427 Ga0466959_0080427_786_2066 379
319 3300046507 Ga0495606_0111170 Ga0495606_0111170_166_1392 379
320 3300047472 Ga0495686_0011193 Ga0495686_0011193_459_1685 379
321 3300048905 Ga0496102_0000120 Ga0496102_0000120_79268_80494 379
322 3300048906 Ga0496103_0035948 Ga0496103_0035948_1017_2243 379
323 3300048920 Ga0496117_0000317 Ga0496117_0000317_4242_5468 379
324 3300048921 Ga0496118_0000303 Ga0496118_0000303_4246_5472 379
325 3300048921 Ga0496118_0045984 Ga0496118_0045984_1651_2877 379
326 3300048921 Ga0496118_0068316 Ga0496118_0068316_713_1939 379
327 3300048922 Ga0496119_0066055 Ga0496119_0066055_616_1842 379
328 3300048923 Ga0496120_0031207 Ga0496120_0031207_179_1405 379
329 3300048925 Ga0496122_0002027 Ga0496122_0002027_16397_17623 379
330 3300048925 Ga0496122_0037607 Ga0496122_0037607_2519_3745 379
331 3300048926 Ga0496123_0007923 Ga0496123_0007923_1047_2273 379
332 3300048927 Ga0496124_0000214 Ga0496124_0000214_31939_33165 379
333 3300048927 Ga0496124_0000684 Ga0496124_0000684_7055_8281 379
334 3300048927 Ga0496124_0028052 Ga0496124_0028052_788_2014 379
335 3300048928 Ga0496125_0020684 Ga0496125_0020684_826_2052 379
336 3300053094 Ga0500566_0016727 Ga0500566_0016727_398_1624 379
337 3300053153 Ga0500616_0003989 Ga0500616_0003989_4298_5536 379
338 3300061719 Ga0466962_0002546 Ga0466962_0002546_395_1621 379

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02784

Orn_Arg_deC_N

Pyridoxal-dependent decarboxylase, pyridoxal binding domain

1

219

0.89

PF00278

Orn_DAP_Arg_deC

Pyridoxal-dependent decarboxylase, C-terminal sheet domain

59

308

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bhy-assembly1.cif.gz_A structure of alanine racemase from aeromonas hydrophila 0.6314 30 148
1wdw-assembly3.cif.gz_K structural basis of mutual activation of the tryptophan synthase a2b2 complex from a hyperthermophile, pyrococcus furiosus 0.626 46 149
7b3y-assembly1.cif.gz_B-9 structure of a nanoparticle for a covid-19 vaccine candidate 0.6246 34 149
6n2a-assembly1.cif.gz_A meso-diaminopimelate decarboxylase from arabidopsis thaliana (isoform 1) 0.6212 21 333
7ygf-assembly3.cif.gz_C crystal structure of yggs from fusobacterium nucleatum 0.609 39 195
ID Description Score Start End Superfamily
af_A0A0P0W6G1_66_221_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.8268 47 149 3.20.20.10
af_E9AGB5_265_500_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.755 43 237 3.20.20.10
af_P9WIU7_308_444_2.40.37.10 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.7523 248 339 2.40.37.10
af_Q75JL7_282_429_2.40.37.10 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.7503 239 335 2.40.37.10
3vabA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.7498 38 237 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A2A2M5E1-F1-model_v4 Orn/DAP/Arg decarboxylase 2 N-terminal domain-containing protein 0.9374 57 148 GO:0004586
GO:0005737
GO:0033387
AF-A0A2A2M5E1-F1-model_v4 Orn/DAP/Arg decarboxylase 2 N-terminal domain-containing protein 0.8402 57 148 GO:0004586
GO:0005737
GO:0033387
AF-A0A3D3SKR3-F1-model_v4 deleted 0.835 37 149
AF-J3AMS1-F1-model_v4 ornithine decarboxylase (EC 4.1.1.17) 0.8256 43 134 GO:0004586
GO:0005737
GO:0033387
AF-A0A2W5FGR0-F1-model_v4 ornithine decarboxylase (EC 4.1.1.17) 0.8253 36 149 GO:0004586
GO:0005737
GO:0033387

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pLDDT pTM Quality
66.4 0.67 Medium
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