F409708

General Info

Members Datasets Scaffolds Average Seq Length
329 234 306 535

Family's Representative Sequence

Representative Sequence 3300026118|Ga0207675_100043811|Ga0207675_1000438113
Length 611
Sequence MDRSYGRCRATRKYARPRASTSAHAPRLPEIEIRSPQSPGGWVSPRLGEPAAGGARGWEALRMGLARLMHRRSGMRSTLAFLLLLALTWVIAPVPALADDATFTTVASGLAADDFTAKSEAVIKIAQVRHAGSKPLLAALLDGRVFFRTADKHVFIVKAADDDPLALIEPVTQQSAGTAAQGDFTKVTTNNRLRKTVRGAIAGFDLADPSAAVRGAAVKELLRTLDEDTVTLLRAQLKAEKDPHVRSDIEAGLALADLQSPDAKVRLAAVDALKTSLNPDAYNALASIATPSSDGTYAEQDTAVRGAAAAAILRIERWRSFYSVFETLFFGLSLGSVLVLAAIGLAITFGVMGVINMAHGELMMLGAYSTYVVQLLMPNHIGASVIVAIPVAFVVSGGVGILIERGIVRFLYGRPLETLLATFGVSLILQQVVRDIFSANNRPVETPSWMAGQLEINDAFSITYNRLYVVIFTLAVFALIQLILKKTTLGLKVRAVSQNRPMARAMGVRAEWIDALTFGLGSGIALSQLTNVGPNLGQQYIVDSFMVVVFGGVGSLWGTLIGGMSLGVVNKLLEPYSGAVLAKILVLVFLILFIQRRPRGLFPQKGRAAET

Samples

Sample ID Description Type Environment
1 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
2 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
3 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
4 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
5 2643221582 Rhizobium sp. Root651 Isolate Unclassified
6 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
7 2738543024 Aminobacter sp. AP02 Isolate Unclassified
8 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
9 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
10 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
11 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
12 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
13 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
14 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
15 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
16 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
17 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
18 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
19 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
20 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
21 2952252522 Salinicola sp. DM10 Isolate Unclassified
22 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
23 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
24 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
25 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
26 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
27 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
28 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
29 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
30 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
31 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
32 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
33 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
34 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
35 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
36 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
37 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
38 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
39 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
40 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
41 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
42 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
43 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
44 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
45 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
46 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
47 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
48 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
49 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
50 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
51 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
52 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
53 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
54 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
55 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
56 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
57 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
58 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
59 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
60 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
61 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
62 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
63 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
64 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
65 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
66 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
67 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
68 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
69 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
70 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
71 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
72 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
73 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
74 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
75 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
76 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
77 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
78 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
79 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
80 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
81 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
82 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
83 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
84 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
85 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
86 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
87 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
88 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
89 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
90 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
91 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
92 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
93 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
94 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
95 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
96 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
131 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
132 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
133 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
134 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
135 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
136 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
137 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
138 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
139 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
140 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
141 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
142 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
143 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
144 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
145 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
146 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
147 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
148 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
149 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
150 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
151 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
152 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
153 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
154 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
155 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
156 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
157 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
158 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
159 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
160 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
161 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
162 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
163 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
164 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
165 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
166 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
167 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
168 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
169 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
170 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
171 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
172 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
173 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
174 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
175 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
176 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
177 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
178 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
179 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
180 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
181 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
182 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
183 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
184 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
185 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
186 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
187 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
188 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
189 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
190 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
191 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
192 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
193 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
194 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
195 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
196 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
197 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
198 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
199 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
200 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
201 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
202 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
203 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
204 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
206 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
207 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
208 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
209 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
210 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
211 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
212 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
213 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
214 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
215 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
216 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
217 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
218 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
219 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
220 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
221 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
222 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
223 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
224 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
225 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
226 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
227 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
228 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
229 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
230 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
231 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
232 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
233 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
234 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.4
Metatranscriptomes 0.61
Isolates 6.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.17
Nodule 1.22
Rhizoplane 2.43
Rhizosphere 79.64
Stem 0
Stem Tuber 0
Unclassified 11.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10017593 3300003187 Bacteria 3094
2 rootH1_10089467 3300003323 Bacteria 2904
3 Ga0058692_1007250 3300003856 Bacteria 2959
4 Ga0065707_10082222 3300005295 Bacteria 18804
5 Ga0065707_10083144 3300005295 Bacteria 10234
6 Ga0070658_10038942 3300005327 Bacteria 3834
7 Ga0070690_100007346 3300005330 Bacteria 6306
8 Ga0070670_100015062 3300005331 Bacteria 6636
9 Ga0070670_100079044 3300005331 Bacteria 2826
10 Ga0070677_10003390 3300005333 Bacteria 5135
11 Ga0070666_10002411 3300005335 Bacteria 11309
12 Ga0070682_100013871 3300005337 Bacteria 4646
13 Ga0068868_100002294 3300005338 Bacteria 13229
14 Ga0070661_100062361 3300005344 Bacteria 2737
15 Ga0070661_100079820 3300005344 Bacteria 2415
16 Ga0070675_100051699 3300005354 Bacteria 3377
17 Ga0070671_100012430 3300005355 Bacteria 6855
18 Ga0070674_100012734 3300005356 Bacteria 5174
19 Ga0070673_100032173 3300005364 Bacteria 3945
20 Ga0070673_100092551 3300005364 Bacteria 2474
21 Ga0070667_100005579 3300005367 Bacteria 10502
22 Ga0070703_10007462 3300005406 Bacteria 3071
23 Ga0070713_100013269 3300005436 Bacteria 6076
24 Ga0070713_100039065 3300005436 Bacteria 3849
25 Ga0070708_100090739 3300005445 Bacteria 2781
26 Ga0070708_100141120 3300005445 Bacteria 2234
27 Ga0070663_100035947 3300005455 Bacteria 3440
28 Ga0070681_10014442 3300005458 Bacteria 7860
29 Ga0070706_100125440 3300005467 Bacteria 2394
30 Ga0070707_100027466 3300005468 Bacteria 5415
31 Ga0070698_100106715 3300005471 Bacteria 2769
32 Ga0070698_100131187 3300005471 Bacteria 2461
33 Ga0070699_100132769 3300005518 Bacteria 2195
34 Ga0070684_100121587 3300005535 Bacteria 2349
35 Ga0070672_100017745 3300005543 Bacteria 5129
36 Ga0070672_100071537 3300005543 Bacteria 2759
37 Ga0070672_100088801 3300005543 Bacteria 2489
38 Ga0070686_100005263 3300005544 Bacteria 7149
39 Ga0070686_100089838 3300005544 Bacteria 2053
40 Ga0070665_100006598 3300005548 Bacteria 11793
41 Ga0070665_100009190 3300005548 Bacteria 10010
42 Ga0070664_100008891 3300005564 Bacteria 8137
43 Ga0070664_100154400 3300005564 Bacteria 2028
44 Ga0068857_100058316 3300005577 Bacteria 3428
45 Ga0068856_100018254 3300005614 Bacteria 6801
46 Ga0068859_100113002 3300005617 Bacteria 2779
47 Ga0068864_100012244 3300005618 Bacteria 7089
48 Ga0068870_10003961 3300005840 Bacteria 6326
49 Ga0068863_100133344 3300005841 Bacteria 2372
50 Ga0068863_100165553 3300005841 Bacteria 2120
51 Ga0068858_100049242 3300005842 Bacteria 3902
52 Ga0068858_100075025 3300005842 Bacteria 3141
53 Ga0081455_10000141 3300005937 Bacteria 84891
54 Ga0081540_1000620 3300005983 Bacteria 33727
55 Ga0081540_1009132 3300005983 Bacteria 6843
56 Ga0081540_1020411 3300005983 Bacteria 3986
57 Ga0081539_10000190 3300005985 Bacteria 142511
58 Ga0081539_10016697 3300005985 Bacteria 5217
59 Ga0075368_10010636 3300006042 Bacteria 3330
60 Ga0075368_10011188 3300006042 Bacteria 3260
61 Ga0075364_10002812 3300006051 Bacteria 9793
62 Ga0070715_10020697 3300006163 Bacteria 2541
63 Ga0075362_10010234 3300006177 Bacteria 3656
64 Ga0075367_10057564 3300006178 Bacteria 2311
65 Ga0068871_100026853 3300006358 Bacteria 4497
66 Ga0068871_100145294 3300006358 Bacteria 2019
67 Ga0075430_100028200 3300006846 Bacteria 4770
68 Ga0075433_10002624 3300006852 Bacteria 13714
69 Ga0075433_10113188 3300006852 Bacteria 2407
70 Ga0075434_100039984 3300006871 Bacteria 4645
71 Ga0075434_100061166 3300006871 Bacteria 3746
72 Ga0075434_100090883 3300006871 Bacteria 3054
73 Ga0075436_100004571 3300006914 Bacteria 9473
74 Ga0097620_100063890 3300006931 Bacteria 3713
75 Ga0097620_100113005 3300006931 Bacteria 2779
76 Ga0105250_10000022 3300009092 Bacteria 231610
77 Ga0105240_10001900 3300009093 Bacteria 34677
78 Ga0105240_10002051 3300009093 Bacteria 33088
79 Ga0111539_10019327 3300009094 Bacteria 8412
80 Ga0111539_10021821 3300009094 Bacteria 7874
81 Ga0111539_10035307 3300009094 Bacteria 6054
82 Ga0114129_10093629 3300009147 Bacteria 4162
83 Ga0114129_10098173 3300009147 Bacteria 4054
84 Ga0105248_10007808 3300009177 Bacteria 11747
85 Ga0105248_10129849 3300009177 Bacteria 2843
86 Ga0105237_10111402 3300009545 Bacteria 2729
87 Ga0105238_10104444 3300009551 Bacteria 2814
88 Ga0105239_10080605 3300010375 Bacteria 3582
89 Ga0105239_10243776 3300010375 Bacteria 2017
90 Ga0157373_10057930 3300013100 Bacteria 2748
91 Ga0157371_10000165 3300013102 Bacteria 96321
92 Ga0157370_10000295 3300013104 Bacteria 63297
93 Ga0157370_10013225 3300013104 Bacteria 8507
94 Ga0157370_10063600 3300013104 Bacteria 3495
95 Ga0157369_10004452 3300013105 Bacteria 16503
96 Ga0157374_10160226 3300013296 Bacteria 2192
97 Ga0157372_10043518 3300013307 Bacteria 4972
98 Ga0157375_10256146 3300013308 Bacteria 1911
99 Ga0163163_10065441 3300014325 Bacteria 3609
100 Ga0163163_10202913 3300014325 Bacteria 2031
101 Ga0157380_10002526 3300014326 Bacteria 12348
102 Ga0157379_10000029 3300014968 Bacteria 85625
103 Ga0157376_10019105 3300014969 Bacteria 5273
104 Ga0157376_10066549 3300014969 Bacteria 3046
105 Ga0213872_10057560 3300021361 Bacteria 1760
106 Ga0209025_1000154 3300025294 Bacteria 170288
107 Ga0207696_1000153 3300025711 Bacteria 119213
108 Ga0207682_10002772 3300025893 Bacteria 7760
109 Ga0207682_10006120 3300025893 Bacteria 4862
110 Ga0207688_10010560 3300025901 Bacteria 5023
111 Ga0207680_10023764 3300025903 Bacteria 3352
112 Ga0207643_10004619 3300025908 Bacteria 7396
113 Ga0207705_10015794 3300025909 Bacteria 5421
114 Ga0207684_10012764 3300025910 Bacteria 7286
115 Ga0207684_10101118 3300025910 Bacteria 2464
116 Ga0207707_10010981 3300025912 Bacteria 7879
117 Ga0207695_10003279 3300025913 Bacteria 22995
118 Ga0207695_10013133 3300025913 Bacteria 9886
119 Ga0207693_10065004 3300025915 Bacteria 2857
120 Ga0207646_10040732 3300025922 Bacteria 4177
121 Ga0207646_10094637 3300025922 Bacteria 2676
122 Ga0207681_10086910 3300025923 Bacteria 2223
123 Ga0207650_10023946 3300025925 Bacteria 4335
124 Ga0207659_10038778 3300025926 Bacteria 3317
125 Ga0207659_10047593 3300025926 Bacteria 3034
126 Ga0207687_10025979 3300025927 Bacteria 3920
127 Ga0207700_10036459 3300025928 Bacteria 3552
128 Ga0207686_10017158 3300025934 Bacteria 4075
129 Ga0207669_10039175 3300025937 Bacteria 2736
130 Ga0207691_10004721 3300025940 Bacteria 13170
131 Ga0207691_10010189 3300025940 Bacteria 9016
132 Ga0207691_10044238 3300025940 Bacteria 4099
133 Ga0207691_10155016 3300025940 Bacteria 2012
134 Ga0207711_10085856 3300025941 Bacteria 2758
135 Ga0207711_10097594 3300025941 Bacteria 2594
136 Ga0207679_10006906 3300025945 Bacteria 7192
137 Ga0207679_10070027 3300025945 Bacteria 2642
138 Ga0207667_10002472 3300025949 Bacteria 23049
139 Ga0207667_10021313 3300025949 Bacteria 7181
140 Ga0207658_10009628 3300025986 Bacteria 6558
141 Ga0207677_10051018 3300026023 Bacteria 2802
142 Ga0207703_10060197 3300026035 Bacteria 3104
143 Ga0207641_10207477 3300026088 Bacteria 1810
144 Ga0207648_10027954 3300026089 Bacteria 5003
145 Ga0207648_10082713 3300026089 Bacteria 2800
146 Ga0207676_10036011 3300026095 Bacteria 3761
147 Ga0207674_10044170 3300026116 Bacteria 4591
148 Ga0207675_100043811 3300026118 Bacteria 4179
149 Ga0207683_10025782 3300026121 Bacteria 5071
150 Ga0209371_1000022 3300027312 Bacteria 536342
151 Ga0209371_1001584 3300027312 Bacteria 14844
152 Ga0268266_10025182 3300028379 Bacteria 5064
153 Ga0268266_10103766 3300028379 Bacteria 2509
154 Ga0268265_10104275 3300028380 Bacteria 2298
155 Ga0265334_10021231 3300028573 Bacteria 2652
156 Ga0307515_10004290 3300028794 Bacteria 29601
157 Ga0307515_10081107 3300028794 Bacteria 4219
158 Ga0265338_10008649 3300028800 Bacteria 12315
159 Ga0265338_10053918 3300028800 Bacteria 3591
160 Ga0265338_10074782 3300028800 Bacteria 2879
161 Ga0268256_1000019 3300030500 Bacteria 587949
162 Ga0265331_10059487 3300031250 Bacteria 1807
163 Ga0265327_10000986 3300031251 Bacteria 40541
164 Ga0265316_10002875 3300031344 Bacteria 17630
165 Ga0307513_10135968 3300031456 Bacteria 2393
166 Ga0307513_10156506 3300031456 Bacteria 2178
167 Ga0307509_10000189 3300031507 Bacteria 96946
168 Ga0307408_100000394 3300031548 Bacteria 39710
169 Ga0307408_100058184 3300031548 Bacteria 2809
170 Ga0265313_10004043 3300031595 Bacteria 11436
171 Ga0316579_10002335 3300031691 Bacteria 7166
172 Ga0265314_10000559 3300031711 Bacteria 47507
173 Ga0307413_10108516 3300031824 Bacteria 1853
174 Ga0307406_10001502 3300031901 Bacteria 12882
175 Ga0307416_100103104 3300032002 Bacteria 2490
176 Ga0316588_1003415 3300033528 Bacteria 2897
177 Ga0316596_1004693 3300033541 Bacteria 3083
178 Ga0373936_0007475 3300035113 Bacteria 4109
179 Ga0316574_0009805 3300035398 Bacteria 5384
180 Ga0316574_0070354 3300035398 Bacteria 2210
181 Ga0316582_0005305 3300036647 Bacteria 6620
182 Ga0316584_0016897 3300036712 Bacteria 5236
183 Ga0316584_0020413 3300036712 Bacteria 4803
184 Ga0316584_0036001 3300036712 Bacteria 3673
185 Ga0373925_0006754 3300037068 Bacteria 8414
186 Ga0316581_0008094 3300037588 Bacteria 2846
187 Ga0400484_43474 3300038725 Bacteria 9074
188 Ga0400490_21442 3300038726 Bacteria 17289
189 Ga0400491_18896 3300038727 Bacteria 19509
190 Ga0400488_28383 3300038741 Bacteria 3799
191 Ga0400483_123957 3300039062 Bacteria 5915
192 Ga0400483_147222 3300039062 Bacteria 3696
193 Ga0400483_258468 3300039062 Bacteria 5007
194 Ga0400483_268834 3300039062 Bacteria 7527
195 Ga0400487_50283 3300039110 Bacteria 6187
196 Ga0436361_0020270 3300039447 Bacteria 8618
197 Ga0436361_0381555 3300039447 Bacteria 3981
198 Ga0451807_0039414 3300041486 Bacteria 2375
199 Ga0451807_1188702 3300041486 Bacteria 2824
200 Ga0439432_023214 3300042006 Bacteria 2045
201 Ga0450891_002231 3300042129 Bacteria 1961
202 Ga0450908_003459 3300042184 Bacteria 3068
203 Ga0451577_0000479 3300042876 Bacteria 68148
204 Ga0466966_0013820 3300044684 Bacteria 5342
205 Ga0466961_0012486 3300044693 Bacteria 5436
206 Ga0466964_0037610 3300044706 Bacteria 1944
207 Ga0453684_0088405 3300044712 Bacteria 3837
208 Ga0466971_0000160 3300044719 Bacteria 25173
209 Ga0466970_0008651 3300044765 Bacteria 5129
210 Ga0466959_0009196 3300045049 Bacteria 7018
211 Ga0466959_0044140 3300045049 Bacteria 3285
212 Ga0495638_0001102 3300046460 Bacteria 26299
213 Ga0495638_0039449 3300046460 Bacteria 2998
214 Ga0495664_0076774 3300046477 Bacteria 2000
215 Ga0495594_0043650 3300046499 Bacteria 2458
216 Ga0495628_0108522 3300046516 Bacteria 2137
217 Ga0495632_0033631 3300046519 Bacteria 2630
218 Ga0495643_0008658 3300046522 Bacteria 6419
219 Ga0495644_0016097 3300046523 Bacteria 2864
220 Ga0495652_0048825 3300046529 Bacteria 3625
221 Ga0495621_0000557 3300046539 Bacteria 9281
222 Ga0495667_0000276 3300046559 Bacteria 33595
223 Ga0495625_0003093 3300046660 Bacteria 16995
224 Ga0495657_0010618 3300046675 Bacteria 6923
225 Ga0495599_0047663 3300046678 Bacteria 2686
226 Ga0495613_0012655 3300046689 Bacteria 6272
227 Ga0495613_0086298 3300046689 Bacteria 2276
228 Ga0495672_0024002 3300047320 Bacteria 3935
229 Ga0495672_0069047 3300047320 Bacteria 2007
230 Ga0496104_0008928 3300048907 Bacteria 8909
231 Ga0496113_0123155 3300048916 Bacteria 2029
232 Ga0496115_0024318 3300048918 Bacteria 4707
233 Ga0496117_0000002 3300048920 Bacteria 2483758
234 Ga0496118_0000736 3300048921 Bacteria 52853
235 Ga0496118_0087338 3300048921 Bacteria 2163
236 Ga0496119_0000944 3300048922 Bacteria 37444
237 Ga0496120_0000534 3300048923 Bacteria 58507
238 Ga0496120_0000762 3300048923 Bacteria 46568
239 Ga0496121_0003220 3300048924 Bacteria 23485
240 Ga0496121_0066994 3300048924 Bacteria 2912
241 Ga0496122_0000004 3300048925 Bacteria 645283
242 Ga0496123_0000007 3300048926 Bacteria 645283
243 Ga0496124_0010545 3300048927 Bacteria 9342
244 Ga0501032_0013700 3300049569 Bacteria 5758
245 Ga0501032_0025176 3300049569 Bacteria 4103
246 Ga0501032_0059407 3300049569 Bacteria 2566
247 Ga0501033_0013143 3300049570 Bacteria 6307
248 Ga0501033_0022239 3300049570 Bacteria 4784
249 Ga0501034_0001513 3300049571 Bacteria 30544
250 Ga0501034_0002376 3300049571 Bacteria 22856
251 Ga0501034_0041517 3300049571 Bacteria 4654
252 Ga0501036_0038224 3300049572 Bacteria 4062
253 Ga0501037_0010598 3300049573 Bacteria 6772
254 Ga0501037_0076793 3300049573 Bacteria 2424
255 Ga0501038_0001224 3300049574 Bacteria 23265
256 Ga0501039_0047343 3300049575 Bacteria 3323
257 Ga0501039_0166581 3300049575 Bacteria 1732
258 Ga0501041_0001437 3300049577 Bacteria 13179
259 Ga0501043_0010497 3300049579 Bacteria 7252
260 Ga0501047_0003092 3300049581 Bacteria 15795
261 Ga0501047_0003943 3300049581 Bacteria 13944
262 Ga0501047_0010079 3300049581 Bacteria 8933
263 Ga0501047_0015256 3300049581 Bacteria 7319
264 Ga0501067_0009908 3300049583 Bacteria 5277
265 Ga0501068_0082475 3300049584 Bacteria 1975
266 Ga0501069_0010967 3300049585 Bacteria 4806
267 Ga0501069_0031306 3300049585 Bacteria 2925
268 Ga0501073_0001803 3300049589 Bacteria 15940
269 Ga0501073_0019224 3300049589 Bacteria 4935
270 Ga0501073_0054717 3300049589 Bacteria 2793
271 Ga0501074_0052546 3300049590 Bacteria 2941
272 Ga0501080_0006698 3300049742 Bacteria 10371
273 Ga0501080_0021471 3300049742 Bacteria 5975
274 Ga0501080_0101537 3300049742 Bacteria 2669
275 Ga0501080_0215583 3300049742 Bacteria 1758
276 Ga0501083_0000890 3300049744 Bacteria 19788
277 Ga0501083_0017537 3300049744 Bacteria 4991
278 Ga0501083_0045524 3300049744 Bacteria 2968
279 Ga0501083_0060055 3300049744 Bacteria 2541
280 Ga0501035_0025098 3300049822 Bacteria 5464
281 Ga0501035_0044637 3300049822 Bacteria 3990
282 Ga0501035_0102917 3300049822 Bacteria 2505
283 Ga0501044_0001571 3300049823 Bacteria 26728
284 Ga0501044_0043862 3300049823 Bacteria 4644
285 Ga0501044_0165943 3300049823 Bacteria 2182
286 nmdc:mga00v17_7_c1 3300050491 Bacteria 167228
287 nmdc:mga0yw44_40529_c1 3300050492 Bacteria 2768
288 nmdc:mga0yw44_49725_c1 3300050492 Bacteria 2532
289 nmdc:mga07m45_60785_c1 3300050496 Bacteria 2139
290 nmdc:mga05p37_30384_c1 3300050507 Bacteria 6592
291 nmdc:mga05p37_81069_c1 3300050507 Bacteria 3997
292 nmdc:mga0n895_112229_c1 3300050512 Bacteria 2743
293 nmdc:mga0n895_61966_c1 3300050512 Bacteria 3695
294 nmdc:mga0rr50_17296_c1 3300050513 Bacteria 4810
295 nmdc:mga0a205_47993_c1 3300050515 Bacteria 4121
296 Ga0500583_0015456 3300053092 Bacteria 3020
297 Ga0500641_0021127 3300053096 Bacteria 2477
298 Ga0500561_0000044 3300053137 Bacteria 24949
299 Ga0500588_0011899 3300053146 Bacteria 2143
300 Ga0500616_0000042 3300053153 Bacteria 351293
301 Ga0500622_0003057 3300053156 Bacteria 11559
302 Ga0501084_0001673 3300054114 Bacteria 17626
303 Ga0501084_0129129 3300054114 Bacteria 2127
304 Ga0501082_0028145 3300060353 Bacteria 4843
305 Ga0501082_0095109 3300060353 Bacteria 2574
306 Ga0466962_0003972 3300061719 Bacteria 7081

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005406 Ga0070703_10007462 Ga0070703_100074622 464
2 3300005436 Ga0070713_100013269 Ga0070713_1000132696 464
3 3300005445 Ga0070708_100141120 Ga0070708_1001411201 464
4 3300005518 Ga0070699_100132769 Ga0070699_1001327692 464
5 3300025910 Ga0207684_10012764 Ga0207684_100127648 464
6 3300025915 Ga0207693_10065004 Ga0207693_100650042 464
7 3300025928 Ga0207700_10036459 Ga0207700_100364592 464
8 3300005295 Ga0065707_10082222 Ga0065707_100822224 472
9 3300014326 Ga0157380_10002526 Ga0157380_100025268 472
10 3300045049 Ga0466959_0009196 Ga0466959_0009196_630_2267 472
11 3300006871 Ga0075434_100061166 Ga0075434_1000611662 474
12 3300035398 Ga0316574_0070354 Ga0316574_0070354_268_1986 474
13 3300005985 Ga0081539_10016697 Ga0081539_100166975 477
14 3300041486 Ga0451807_0039414 Ga0451807_0039414_762_2333 477
15 3300039447 Ga0436361_0381555 Ga0436361_0381555_1814_3430 480
16 3300045049 Ga0466959_0044140 Ga0466959_0044140_1202_2824 480
17 3300050492 nmdc:mga0yw44_49725_c1 nmdc:mga0yw44_49725_c1_486_2114 480
18 3300042129 Ga0450891_002231 Ga0450891_002231_72_1751 483
19 3300021361 Ga0213872_10057560 Ga0213872_100575601 484
20 3300039447 Ga0436361_0020270 Ga0436361_0020270_6733_8358 484
21 iso_pu_bacteria 2841859092 2841862502 484
22 iso_pu_bacteria 2842515876 2842519286 484
23 3300005983 Ga0081540_1000620 Ga0081540_100062021 488
24 3300046460 Ga0495638_0001102 Ga0495638_0001102_23576_25222 488
25 3300046529 Ga0495652_0048825 Ga0495652_0048825_971_2512 488
26 3300046660 Ga0495625_0003093 Ga0495625_0003093_9491_11020 488
27 3300048924 Ga0496121_0066994 Ga0496121_0066994_765_2294 488
28 3300005543 Ga0070672_100088801 Ga0070672_1000888012 489
29 3300025893 Ga0207682_10006120 Ga0207682_100061202 489
30 3300025926 Ga0207659_10038778 Ga0207659_100387783 489
31 3300025940 Ga0207691_10004721 Ga0207691_100047212 489
32 3300026121 Ga0207683_10025782 Ga0207683_100257824 489
33 3300036712 Ga0316584_0016897 Ga0316584_0016897_1866_3398 489
34 3300049742 Ga0501080_0215583 Ga0501080_0215583_154_1743 489
35 3300005333 Ga0070677_10003390 Ga0070677_100033903 490
36 3300046523 Ga0495644_0016097 Ga0495644_0016097_481_2061 490
37 3300046539 Ga0495621_0000557 Ga0495621_0000557_603_2183 490
38 3300005840 Ga0068870_10003961 Ga0068870_100039614 491
39 3300025893 Ga0207682_10002772 Ga0207682_100027724 491
40 3300025908 Ga0207643_10004619 Ga0207643_100046194 491
41 3300026089 Ga0207648_10027954 Ga0207648_100279544 491
42 3300028380 Ga0268265_10104275 Ga0268265_101042752 491
43 3300035398 Ga0316574_0009805 Ga0316574_0009805_148_1671 491
44 3300005356 Ga0070674_100012734 Ga0070674_1000127343 492
45 3300005364 Ga0070673_100032173 Ga0070673_1000321733 492
46 3300053096 Ga0500641_0021127 Ga0500641_0021127_738_2369 492
47 3300053146 Ga0500588_0011899 Ga0500588_0011899_102_1733 492
48 3300042184 Ga0450908_003459 Ga0450908_003459_390_2057 493
49 3300047320 Ga0495672_0069047 Ga0495672_0069047_18_1658 493
50 3300048922 Ga0496119_0000944 Ga0496119_0000944_18068_19690 493
51 3300048923 Ga0496120_0000762 Ga0496120_0000762_22103_23725 493
52 3300003323 rootH1_10089467 rootH1_100894672 494
53 3300005937 Ga0081455_10000141 Ga0081455_1000014150 495
54 3300005983 Ga0081540_1009132 Ga0081540_10091322 495
55 3300005983 Ga0081540_1020411 Ga0081540_10204113 495
56 3300025923 Ga0207681_10086910 Ga0207681_100869102 495
57 3300049584 Ga0501068_0082475 Ga0501068_0082475_388_1947 495
58 3300005364 Ga0070673_100092551 Ga0070673_1000925512 496
59 3300006178 Ga0075367_10057564 Ga0075367_100575642 496
60 3300046519 Ga0495632_0033631 Ga0495632_0033631_156_1811 496
61 3300005535 Ga0070684_100121587 Ga0070684_1001215871 498
62 3300009093 Ga0105240_10001900 Ga0105240_100019003 498
63 3300009545 Ga0105237_10111402 Ga0105237_101114022 498
64 3300025913 Ga0207695_10003279 Ga0207695_1000327921 498
65 3300035113 Ga0373936_0007475 Ga0373936_0007475_990_2654 498
66 3300037068 Ga0373925_0006754 Ga0373925_0006754_5755_7416 498
67 3300031548 Ga0307408_100058184 Ga0307408_1000581842 500
68 3300039062 Ga0400483_147222 Ga0400483_147222_1657_3273 500
69 3300048907 Ga0496104_0008928 Ga0496104_0008928_4748_6361 501
70 3300048918 Ga0496115_0024318 Ga0496115_0024318_2048_3661 501
71 3300005471 Ga0070698_100131187 Ga0070698_1001311872 502
72 3300009092 Ga0105250_10000022 Ga0105250_1000002217 502
73 3300025711 Ga0207696_1000153 Ga0207696_100015357 502
74 3300025901 Ga0207688_10010560 Ga0207688_100105602 502
75 3300025937 Ga0207669_10039175 Ga0207669_100391752 502
76 3300025940 Ga0207691_10155016 Ga0207691_101550162 502
77 3300031507 Ga0307509_10000189 Ga0307509_1000018945 502
78 3300048927 Ga0496124_0010545 Ga0496124_0010545_7331_8923 502
79 3300005295 Ga0065707_10083144 Ga0065707_100831444 503
80 3300014968 Ga0157379_10000029 Ga0157379_1000002955 503
81 3300025940 Ga0207691_10044238 Ga0207691_100442382 503
82 3300005355 Ga0070671_100012430 Ga0070671_1000124304 504
83 3300005445 Ga0070708_100090739 Ga0070708_1000907392 505
84 3300005458 Ga0070681_10014442 Ga0070681_100144425 505
85 3300005467 Ga0070706_100125440 Ga0070706_1001254402 505
86 3300005468 Ga0070707_100027466 Ga0070707_1000274665 505
87 3300025910 Ga0207684_10101118 Ga0207684_101011182 505
88 3300025912 Ga0207707_10010981 Ga0207707_100109817 505
89 3300025922 Ga0207646_10040732 Ga0207646_100407322 505
90 3300005842 Ga0068858_100049242 Ga0068858_1000492422 506
91 3300028794 Ga0307515_10081107 Ga0307515_100811074 506
92 3300009551 Ga0105238_10104444 Ga0105238_101044441 507
93 3300010375 Ga0105239_10080605 Ga0105239_100806052 507
94 3300010375 Ga0105239_10243776 Ga0105239_102437762 507
95 3300031691 Ga0316579_10002335 Ga0316579_100023353 507
96 3300033528 Ga0316588_1003415 Ga0316588_10034152 507
97 3300033541 Ga0316596_1004693 Ga0316596_10046932 507
98 3300005327 Ga0070658_10038942 Ga0070658_100389422 508
99 3300005841 Ga0068863_100165553 Ga0068863_1001655532 508
100 3300006358 Ga0068871_100026853 Ga0068871_1000268533 508
101 3300009147 Ga0114129_10098173 Ga0114129_100981732 508
102 3300013104 Ga0157370_10013225 Ga0157370_100132255 508
103 3300014325 Ga0163163_10065441 Ga0163163_100654412 508
104 3300025909 Ga0207705_10015794 Ga0207705_100157942 508
105 3300025913 Ga0207695_10013133 Ga0207695_100131335 508
106 3300025949 Ga0207667_10021313 Ga0207667_100213135 508
107 3300026088 Ga0207641_10207477 Ga0207641_102074771 508
108 3300028800 Ga0265338_10074782 Ga0265338_100747822 508
109 3300031344 Ga0265316_10002875 Ga0265316_1000287514 508
110 3300041486 Ga0451807_1188702 Ga0451807_1188702_562_2169 508
111 3300046516 Ga0495628_0108522 Ga0495628_0108522_498_2111 508
112 3300046678 Ga0495599_0047663 Ga0495599_0047663_665_2278 508
113 3300048921 Ga0496118_0087338 Ga0496118_0087338_433_2046 508
114 3300048924 Ga0496121_0003220 Ga0496121_0003220_1403_3016 508
115 3300050496 nmdc:mga07m45_60785_c1 nmdc:mga07m45_60785_c1_414_2036 508
116 3300005330 Ga0070690_100007346 Ga0070690_1000073465 509
117 3300005331 Ga0070670_100015062 Ga0070670_1000150622 509
118 3300005331 Ga0070670_100079044 Ga0070670_1000790442 509
119 3300005338 Ga0068868_100002294 Ga0068868_10000229411 509
120 3300005344 Ga0070661_100062361 Ga0070661_1000623612 509
121 3300005354 Ga0070675_100051699 Ga0070675_1000516992 509
122 3300005543 Ga0070672_100017745 Ga0070672_1000177452 509
123 3300005544 Ga0070686_100005263 Ga0070686_1000052634 509
124 3300005564 Ga0070664_100008891 Ga0070664_1000088916 509
125 3300005614 Ga0068856_100018254 Ga0068856_1000182544 509
126 3300005618 Ga0068864_100012244 Ga0068864_1000122443 509
127 3300005842 Ga0068858_100075025 Ga0068858_1000750252 509
128 3300005985 Ga0081539_10000190 Ga0081539_1000019040 509
129 3300006358 Ga0068871_100145294 Ga0068871_1001452942 509
130 3300006852 Ga0075433_10002624 Ga0075433_100026248 509
131 3300006871 Ga0075434_100039984 Ga0075434_1000399842 509
132 3300009093 Ga0105240_10002051 Ga0105240_1000205115 509
133 3300009094 Ga0111539_10035307 Ga0111539_100353072 509
134 3300009177 Ga0105248_10007808 Ga0105248_100078083 509
135 3300013104 Ga0157370_10063600 Ga0157370_100636002 509
136 3300013105 Ga0157369_10004452 Ga0157369_1000445212 509
137 3300013296 Ga0157374_10160226 Ga0157374_101602262 509
138 3300013307 Ga0157372_10043518 Ga0157372_100435182 509
139 3300025925 Ga0207650_10023946 Ga0207650_100239463 509
140 3300025926 Ga0207659_10047593 Ga0207659_100475932 509
141 3300025940 Ga0207691_10010189 Ga0207691_100101895 509
142 3300025945 Ga0207679_10006906 Ga0207679_100069065 509
143 3300025949 Ga0207667_10002472 Ga0207667_1000247212 509
144 3300025986 Ga0207658_10009628 Ga0207658_100096284 509
145 3300026035 Ga0207703_10060197 Ga0207703_100601973 509
146 3300026095 Ga0207676_10036011 Ga0207676_100360113 509
147 3300028794 Ga0307515_10004290 Ga0307515_1000429019 509
148 3300031456 Ga0307513_10135968 Ga0307513_101359682 509
149 3300031456 Ga0307513_10156506 Ga0307513_101565062 509
150 3300031595 Ga0265313_10004043 Ga0265313_100040432 509
151 3300031711 Ga0265314_10000559 Ga0265314_1000055919 509
152 3300031824 Ga0307413_10108516 Ga0307413_101085161 509
153 3300046477 Ga0495664_0076774 Ga0495664_0076774_249_1868 509
154 3300046689 Ga0495613_0012655 Ga0495613_0012655_2407_4038 509
155 3300050512 nmdc:mga0n895_61966_c1 nmdc:mga0n895_61966_c1_812_2446 509
156 3300050515 nmdc:mga0a205_47993_c1 nmdc:mga0a205_47993_c1_956_2590 509
157 iso_pu_bacteria 2687453129 2687580458 509
158 3300005335 Ga0070666_10002411 Ga0070666_100024113 510
159 3300005344 Ga0070661_100079820 Ga0070661_1000798201 510
160 3300005367 Ga0070667_100005579 Ga0070667_1000055792 510
161 3300005548 Ga0070665_100009190 Ga0070665_1000091902 510
162 3300005577 Ga0068857_100058316 Ga0068857_1000583162 510
163 3300005841 Ga0068863_100133344 Ga0068863_1001333442 510
164 3300009094 Ga0111539_10019327 Ga0111539_100193273 510
165 3300009094 Ga0111539_10021821 Ga0111539_100218217 510
166 3300009147 Ga0114129_10093629 Ga0114129_100936293 510
167 3300014325 Ga0163163_10202913 Ga0163163_102029132 510
168 3300014969 Ga0157376_10066549 Ga0157376_100665492 510
169 3300025903 Ga0207680_10023764 Ga0207680_100237643 510
170 3300025941 Ga0207711_10097594 Ga0207711_100975942 510
171 3300026023 Ga0207677_10051018 Ga0207677_100510182 510
172 3300026116 Ga0207674_10044170 Ga0207674_100441702 510
173 3300026118 Ga0207675_100043811 Ga0207675_1000438113 510
174 3300028379 Ga0268266_10103766 Ga0268266_101037662 510
175 3300046559 Ga0495667_0000276 Ga0495667_0000276_29131_30798 510
176 3300046675 Ga0495657_0010618 Ga0495657_0010618_2764_4431 510
177 3300046689 Ga0495613_0086298 Ga0495613_0086298_276_1943 510
178 3300049569 Ga0501032_0013700 Ga0501032_0013700_3887_5515 510
179 3300049569 Ga0501032_0025176 Ga0501032_0025176_1360_2988 510
180 3300049569 Ga0501032_0059407 Ga0501032_0059407_701_2329 510
181 3300049570 Ga0501033_0013143 Ga0501033_0013143_3231_4859 510
182 3300049571 Ga0501034_0001513 Ga0501034_0001513_21438_23066 510
183 3300049571 Ga0501034_0041517 Ga0501034_0041517_989_2617 510
184 3300049573 Ga0501037_0076793 Ga0501037_0076793_492_2120 510
185 3300049575 Ga0501039_0047343 Ga0501039_0047343_1005_2633 510
186 3300049575 Ga0501039_0166581 Ga0501039_0166581_61_1689 510
187 3300049581 Ga0501047_0003943 Ga0501047_0003943_345_1973 510
188 3300049581 Ga0501047_0010079 Ga0501047_0010079_5455_7083 510
189 3300049581 Ga0501047_0015256 Ga0501047_0015256_2265_3893 510
190 3300049585 Ga0501069_0010967 Ga0501069_0010967_310_1938 510
191 3300049589 Ga0501073_0054717 Ga0501073_0054717_844_2472 510
192 3300049742 Ga0501080_0006698 Ga0501080_0006698_4359_5987 510
193 3300049744 Ga0501083_0000890 Ga0501083_0000890_1304_2932 510
194 3300049744 Ga0501083_0045524 Ga0501083_0045524_236_1864 510
195 3300049822 Ga0501035_0025098 Ga0501035_0025098_3033_4661 510
196 3300049823 Ga0501044_0043862 Ga0501044_0043862_2547_4175 510
197 3300049823 Ga0501044_0165943 Ga0501044_0165943_492_2120 510
198 3300050507 nmdc:mga05p37_30384_c1 nmdc:mga05p37_30384_c1_1575_3227 510
199 3300050507 nmdc:mga05p37_81069_c1 nmdc:mga05p37_81069_c1_517_2172 510
200 3300053153 Ga0500616_0000042 Ga0500616_0000042_33361_34992 510
201 3300054114 Ga0501084_0001673 Ga0501084_0001673_296_1924 510
202 3300060353 Ga0501082_0028145 Ga0501082_0028145_1910_3538 510
203 3300005471 Ga0070698_100106715 Ga0070698_1001067152 511
204 3300005544 Ga0070686_100089838 Ga0070686_1000898381 511
205 3300005548 Ga0070665_100006598 Ga0070665_1000065982 511
206 3300006914 Ga0075436_100004571 Ga0075436_1000045716 511
207 3300006931 Ga0097620_100063890 Ga0097620_1000638902 511
208 3300009177 Ga0105248_10129849 Ga0105248_101298492 511
209 3300013308 Ga0157375_10256146 Ga0157375_102561462 511
210 3300014969 Ga0157376_10019105 Ga0157376_100191054 511
211 3300025922 Ga0207646_10094637 Ga0207646_100946371 511
212 3300025927 Ga0207687_10025979 Ga0207687_100259792 511
213 3300025934 Ga0207686_10017158 Ga0207686_100171582 511
214 3300025941 Ga0207711_10085856 Ga0207711_100858562 511
215 3300026089 Ga0207648_10082713 Ga0207648_100827132 511
216 3300028379 Ga0268266_10025182 Ga0268266_100251822 511
217 3300028800 Ga0265338_10053918 Ga0265338_100539182 511
218 3300031250 Ga0265331_10059487 Ga0265331_100594872 511
219 3300042006 Ga0439432_023214 Ga0439432_023214_88_1701 511
220 3300046499 Ga0495594_0043650 Ga0495594_0043650_219_1823 511
221 3300047320 Ga0495672_0024002 Ga0495672_0024002_556_2160 511
222 3300049589 Ga0501073_0019224 Ga0501073_0019224_1770_3491 511
223 3300005617 Ga0068859_100113002 Ga0068859_1001130022 512
224 3300006931 Ga0097620_100113005 Ga0097620_1001130052 512
225 3300031548 Ga0307408_100000394 Ga0307408_1000003945 512
226 3300031901 Ga0307406_10001502 Ga0307406_100015022 512
227 3300032002 Ga0307416_100103104 Ga0307416_1001031042 512
228 3300038725 Ga0400484_43474 Ga0400484_43474_2221_3837 512
229 3300046522 Ga0495643_0008658 Ga0495643_0008658_4703_6352 512
230 3300049577 Ga0501041_0001437 Ga0501041_0001437_2799_4514 512
231 3300053092 Ga0500583_0015456 Ga0500583_0015456_488_2131 513
232 3300006163 Ga0070715_10020697 Ga0070715_100206972 514
233 3300038726 Ga0400490_21442 Ga0400490_21442_8237_9859 514
234 3300038727 Ga0400491_18896 Ga0400491_18896_7250_8872 514
235 3300038741 Ga0400488_28383 Ga0400488_28383_671_2293 514
236 3300039062 Ga0400483_268834 Ga0400483_268834_932_2554 514
237 3300039110 Ga0400487_50283 Ga0400487_50283_182_1804 514
238 3300036712 Ga0316584_0036001 Ga0316584_0036001_191_1882 515
239 3300039062 Ga0400483_258468 Ga0400483_258468_2834_4438 515
240 3300005543 Ga0070672_100071537 Ga0070672_1000715372 516
241 3300005564 Ga0070664_100154400 Ga0070664_1001544002 516
242 3300006852 Ga0075433_10113188 Ga0075433_101131882 516
243 3300006871 Ga0075434_100090883 Ga0075434_1000908832 516
244 3300025945 Ga0207679_10070027 Ga0207679_100700272 516
245 3300031251 Ga0265327_10000986 Ga0265327_1000098630 516
246 3300044684 Ga0466966_0013820 Ga0466966_0013820_2314_3945 516
247 3300044693 Ga0466961_0012486 Ga0466961_0012486_553_2184 516
248 3300044706 Ga0466964_0037610 Ga0466964_0037610_200_1831 516
249 3300044719 Ga0466971_0000160 Ga0466971_0000160_22836_24467 516
250 3300044765 Ga0466970_0008651 Ga0466970_0008651_569_2200 516
251 3300049583 Ga0501067_0009908 Ga0501067_0009908_639_2237 516
252 3300049742 Ga0501080_0101537 Ga0501080_0101537_291_1889 516
253 3300050512 nmdc:mga0n895_112229_c1 nmdc:mga0n895_112229_c1_526_2184 516
254 3300050513 nmdc:mga0rr50_17296_c1 nmdc:mga0rr50_17296_c1_383_2041 516
255 3300061719 Ga0466962_0003972 Ga0466962_0003972_1957_3588 516
256 iso_pu_bacteria 2952252522 2952254674 516
257 3300036647 Ga0316582_0005305 Ga0316582_0005305_2371_4050 517
258 3300039062 Ga0400483_123957 Ga0400483_123957_3846_5450 517
259 3300005436 Ga0070713_100039065 Ga0070713_1000390653 518
260 3300036712 Ga0316584_0020413 Ga0316584_0020413_2469_4148 518
261 3300037588 Ga0316581_0008094 Ga0316581_0008094_1134_2813 518
262 3300053156 Ga0500622_0003057 Ga0500622_0003057_1760_3370 518
263 3300005337 Ga0070682_100013871 Ga0070682_1000138713 519
264 3300049570 Ga0501033_0022239 Ga0501033_0022239_1225_2931 520
265 3300049571 Ga0501034_0002376 Ga0501034_0002376_13792_15498 520
266 3300049572 Ga0501036_0038224 Ga0501036_0038224_1979_3685 520
267 3300049573 Ga0501037_0010598 Ga0501037_0010598_2681_4387 520
268 3300049574 Ga0501038_0001224 Ga0501038_0001224_6716_8422 520
269 3300049579 Ga0501043_0010497 Ga0501043_0010497_4405_6111 520
270 3300049581 Ga0501047_0003092 Ga0501047_0003092_452_2158 520
271 3300049589 Ga0501073_0001803 Ga0501073_0001803_5171_6877 520
272 3300049590 Ga0501074_0052546 Ga0501074_0052546_455_2161 520
273 3300049742 Ga0501080_0021471 Ga0501080_0021471_204_1910 520
274 3300049744 Ga0501083_0017537 Ga0501083_0017537_2425_4131 520
275 3300049744 Ga0501083_0060055 Ga0501083_0060055_281_1891 520
276 3300049822 Ga0501035_0102917 Ga0501035_0102917_664_2370 520
277 3300049823 Ga0501044_0001571 Ga0501044_0001571_16617_18323 520
278 3300054114 Ga0501084_0129129 Ga0501084_0129129_262_1968 520
279 3300060353 Ga0501082_0095109 Ga0501082_0095109_484_2190 520
280 3300006042 Ga0075368_10011188 Ga0075368_100111882 521
281 3300044712 Ga0453684_0088405 Ga0453684_0088405_1236_2864 521
282 3300006846 Ga0075430_100028200 Ga0075430_1000282003 522
283 3300005455 Ga0070663_100035947 Ga0070663_1000359473 523
284 3300046460 Ga0495638_0039449 Ga0495638_0039449_640_2277 523
285 3300049822 Ga0501035_0044637 Ga0501035_0044637_1847_3463 523
286 iso_pu_bacteria 2738543024 2739306913 523
287 3300042876 Ga0451577_0000479 Ga0451577_0000479_6429_8162 524
288 iso_pu_bacteria 2765235802 2765464402 525
289 iso_pu_bacteria 2767802442 2770194760 525
290 iso_pu_bacteria 2775506902 2776272449 525
291 iso_pu_bacteria 2775506904 2776284389 525
292 iso_pu_bacteria 2839993093 2839994313 525
293 iso_pu_bacteria 2840764183 2840769274 525
294 iso_pu_bacteria 2894652903 2894655308 525
295 iso_pu_bacteria 2904578770 2904579011 525
296 iso_pu_bacteria 2919119836 2919122162 525
297 iso_pu_bacteria 2996310559 2996314774 525
298 3300028573 Ga0265334_10021231 Ga0265334_100212312 526
299 3300028800 Ga0265338_10008649 Ga0265338_100086497 526
300 3300006051 Ga0075364_10002812 Ga0075364_1000281213 527
301 iso_pu_bacteria 2537561587 2537873915 528
302 iso_pu_bacteria 2599185210 2599601966 528
303 iso_pu_bacteria 2643221582 2643920040 528
304 iso_pu_bacteria 2899792073 2899795815 528
305 iso_pu_bacteria 2933011516 2933014542 528
306 iso_pu_bacteria 2513237351 2514589375 530
307 3300003187 JGI25151J46595_10017593 JGI25151J46595_100175932 532
308 3300003856 Ga0058692_1007250 Ga0058692_10072502 532
309 3300006042 Ga0075368_10010636 Ga0075368_100106362 532
310 3300006177 Ga0075362_10010234 Ga0075362_100102342 532
311 3300013100 Ga0157373_10057930 Ga0157373_100579302 532
312 3300013102 Ga0157371_10000165 Ga0157371_1000016551 532
313 3300013104 Ga0157370_10000295 Ga0157370_1000029515 532
314 3300025294 Ga0209025_1000154 Ga0209025_10001543 532
315 3300027312 Ga0209371_1000022 Ga0209371_1000022379 532
316 3300027312 Ga0209371_1001584 Ga0209371_100158411 532
317 3300030500 Ga0268256_1000019 Ga0268256_1000019141 532
318 3300048916 Ga0496113_0123155 Ga0496113_0123155_293_1906 532
319 3300048920 Ga0496117_0000002 Ga0496117_0000002_166065_167678 532
320 3300048921 Ga0496118_0000736 Ga0496118_0000736_16877_18490 532
321 3300048923 Ga0496120_0000534 Ga0496120_0000534_3207_4820 532
322 3300048925 Ga0496122_0000004 Ga0496122_0000004_477998_479611 532
323 3300048926 Ga0496123_0000007 Ga0496123_0000007_477998_479611 532
324 3300049585 Ga0501069_0031306 Ga0501069_0031306_1130_2830 532
325 3300050491 nmdc:mga00v17_7_c1 nmdc:mga00v17_7_c1_103276_104889 532
326 3300050492 nmdc:mga0yw44_40529_c1 nmdc:mga0yw44_40529_c1_20_1633 532
327 3300053137 Ga0500561_0000044 Ga0500561_0000044_23149_24762 532
328 iso_pu_bacteria 2554235003 2554248553 532
329 iso_pu_bacteria 8003570095 8003571926 532

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02653

BPD_transp_2

Branched-chain amino acid transport system / permease component

327

594

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5d0b-assembly2.cif.gz_B crystal structure of epoxyqueuosine reductase with a trna-tyr epoxyqueuosine-modified trna stem loop 0.7054 117 181
5t8y-assembly2.cif.gz_B structure of epoxyqueuosine reductase from bacillus subtilis with the asp134 catalytic loop swung out of the active site. 0.5614 98 177
8gp6-assembly1.cif.gz_B structure of the vaccinia virus a16/g9 sub-complex from the orthopoxvirus entry-fusion complex 0.5385 155 224
5t8y-assembly1.cif.gz_A structure of epoxyqueuosine reductase from bacillus subtilis with the asp134 catalytic loop swung out of the active site. 0.5323 93 177
5n3u-assembly1.cif.gz_B-2 the structure of the complex of cpce and cpcf of phycocyanin lyase from nostoc sp. pcc7120 0.523 114 234
ID Description Score Start End Superfamily
af_P0AEX7_11_292_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9279 245 516 1.10.3470.10
af_P0AEX7_11_292_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8931 245 516 1.10.3470.10
af_P32720_52_318_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8029 247 514 1.10.3470.10
af_P77672_36_301_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7917 248 516 1.10.3470.10
af_P37772_34_305_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7912 245 514 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A3C0TX35-F1-model_v4 Urea ABC transporter permease subunit UrtB 0.9546 241 528 GO:0005886
GO:0006865
GO:0022857
AF-N6YNY2-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9527 241 528 GO:0005886
GO:0006865
GO:0022857
AF-A0A1B9YHP4-F1-model_v4 Urea ABC transporter permease subunit UrtB 0.9502 241 528 GO:0005886
GO:0006865
GO:0022857
AF-A0A336JSN8-F1-model_v4 Amino acid/amide ABC transporter membrane protein 1 (HAAT family) 0.9493 241 528 GO:0005886
GO:0006865
GO:0022857
AF-A0A368AFQ8-F1-model_v4 deleted 0.9473 241 528

Feature Viewer

pLDDT pTM Quality
80.16 0.64 Medium
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Predicted Structure (AlphaFold2)

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