F401737

General Info

Members Datasets Scaffolds Average Seq Length
312 206 624 184

Family's Representative Sequence

Representative Sequence 3300025916|Ga0207663_10599409|Ga0207663_105994091
Length 216
Sequence MDHIDIERVAGFIVRDYGLPLRVASVSFDQPGRYIVEFCNSTSRAKAVSVANETLASVRTGRATPSMFNRIHVDYYGSPTPLNQMASITVPEARMAVVKPYDASQLNAIEKAIRDSDLGVNPGNDGTVIRVVIPQLSEERRRDMVKVAKQKGEDARVSVRGVRRKAKEEIDKLVKDGEVGEDDGARGEKELDALTHKYTAQVDELVKHKEAELLEV

Samples

Sample ID Description Type Environment
1 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300000531 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNB_Illumina_Assembled Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
30 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
40 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
48 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
49 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
50 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
81 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
82 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
83 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
84 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
88 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
89 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
90 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
91 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
92 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
96 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
98 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
99 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
100 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
101 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
102 3300036457 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
103 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
104 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
111 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
112 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
115 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
116 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
117 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
118 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
119 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
120 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
121 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
122 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
123 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
124 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
125 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
126 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
127 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
128 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
129 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
130 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
131 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
132 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
133 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
134 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
137 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
138 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
139 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
140 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
143 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
144 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
145 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
146 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
151 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
156 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
161 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
162 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
163 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
164 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
167 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
168 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
169 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
170 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
171 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
172 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
173 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
176 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
177 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
180 3300059625 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 151R_CD_T3_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
181 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
184 2547132424 Nocardia nova SH22a Isolate Unclassified
185 2558860280 Kutzneria sp. 744 Isolate Unclassified
186 2582580736 Prauserella sp. Am3 Isolate Unclassified
187 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
188 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
189 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
190 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
191 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
192 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
193 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
194 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
195 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
196 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
197 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
198 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
199 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
200 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
201 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
202 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
203 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
204 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
205 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
206 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.69
Metatranscriptomes 9.94
Isolates 7.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.32
Nodule 0
Rhizoplane 10.26
Rhizosphere 75.32
Stem 0
Stem Tuber 0.32
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207663_10599409 3300025916 Bacteria 865
2 CNBas_1005384 3300000531 Bacteria 732
3 JGI24739J22299_10123591 3300001989 Bacteria 772
4 JGI24735J21928_10084602 3300002067 Bacteria 909
5 Ga0070658_10234608 3300005327 Bacteria 1554
6 Ga0070658_10555478 3300005327 Bacteria 994
7 Ga0070683_100152774 3300005329 Bacteria 2189
8 Ga0070666_10373211 3300005335 Bacteria 1023
9 Ga0070680_100659112 3300005336 Bacteria 900
10 Ga0070668_100166048 3300005347 Bacteria 1794
11 Ga0070668_100217430 3300005347 Bacteria 1574
12 Ga0070668_100304275 3300005347 Bacteria 1338
13 Ga0070671_100046130 3300005355 Bacteria 3624
14 Ga0070674_100252073 3300005356 Bacteria 1387
15 Ga0070667_100431522 3300005367 Bacteria 1202
16 Ga0070714_100011545 3300005435 Bacteria 7011
17 Ga0070713_100059495 3300005436 Bacteria 3191
18 Ga0070710_10002585 3300005437 Bacteria 8598
19 Ga0070685_10481870 3300005466 Bacteria 874
20 Ga0070699_100417548 3300005518 Bacteria 1214
21 Ga0070665_100008100 3300005548 Bacteria 10637
22 Ga0068855_100416169 3300005563 Bacteria 1471
23 Ga0068863_100004003 3300005841 Bacteria 14547
24 Ga0068863_100071402 3300005841 Bacteria 3284
25 Ga0068858_100001367 3300005842 Bacteria 25142
26 Ga0068860_100000124 3300005843 Bacteria 124227
27 Ga0068860_100017208 3300005843 Bacteria 7047
28 Ga0081455_10001024 3300005937 Bacteria 35221
29 Ga0081455_10042944 3300005937 Bacteria 3960
30 Ga0081538_10137516 3300005981 Bacteria 1134
31 Ga0081539_10054333 3300005985 Bacteria 2236
32 Ga0070717_10402414 3300006028 Bacteria 1230
33 Ga0075429_100186793 3300006880 Bacteria 1816
34 Ga0097620_100019694 3300006931 Bacteria 6777
35 Ga0105251_10099258 3300009011 Bacteria 1331
36 Ga0105247_10042151 3300009101 Bacteria 2794
37 Ga0105247_10195041 3300009101 Bacteria 1358
38 Ga0105247_10257081 3300009101 Bacteria 1196
39 Ga0105247_10273213 3300009101 Bacteria 1163
40 Ga0114129_11696196 3300009147 Bacteria 771
41 Ga0105243_10363294 3300009148 Bacteria 1333
42 Ga0105242_10438333 3300009176 Bacteria 1228
43 Ga0157374_10360120 3300013296 Bacteria 1446
44 Ga0157378_11745327 3300013297 Bacteria 670
45 Ga0157372_10000044 3300013307 Bacteria 152637
46 Ga0157375_10365912 3300013308 Bacteria 1608
47 Ga0157379_10124626 3300014968 Bacteria 2318
48 Ga0157379_10257650 3300014968 Bacteria 1585
49 Ga0163161_10378408 3300017792 Bacteria 1131
50 Ga0197907_10612147 3300020069 Bacteria 3538
51 Ga0197907_11438634 3300020069 Bacteria 1035
52 Ga0206356_10306179 3300020070 Bacteria 1625
53 Ga0206356_11065743 3300020070 Bacteria 897
54 Ga0206356_11844548 3300020070 Bacteria 961
55 Ga0206349_1697418 3300020075 Bacteria 1953
56 Ga0206352_10095744 3300020078 Bacteria 771
57 Ga0206352_11235241 3300020078 Bacteria 947
58 Ga0206350_10345732 3300020080 Bacteria 2620
59 Ga0206350_10898709 3300020080 Bacteria 858
60 Ga0206354_10593073 3300020081 Bacteria 691
61 Ga0206354_10857348 3300020081 Bacteria 1064
62 Ga0206353_10183636 3300020082 Bacteria 4601
63 Ga0206353_10255053 3300020082 Bacteria 1801
64 Ga0206353_10488111 3300020082 Bacteria 825
65 Ga0206353_11353908 3300020082 Bacteria 851
66 Ga0206353_11831659 3300020082 Bacteria 4395
67 Ga0213873_10000089 3300021358 Bacteria 18091
68 Ga0213876_10003994 3300021384 Bacteria 8309
69 Ga0213875_10000035 3300021388 Bacteria 167011
70 Ga0213875_10180513 3300021388 Bacteria 991
71 Ga0224712_10002926 3300022467 Bacteria 4324
72 Ga0224712_10058478 3300022467 Bacteria 1527
73 Ga0224712_10101937 3300022467 Bacteria 1219
74 Ga0224712_10123549 3300022467 Bacteria 1123
75 Ga0224712_10184943 3300022467 Bacteria 941
76 Ga0224712_10299203 3300022467 Bacteria 752
77 Ga0207692_10000124 3300025898 Bacteria 23176
78 Ga0207692_10250282 3300025898 Bacteria 1061
79 Ga0207710_10018571 3300025900 Bacteria 2959
80 Ga0207710_10186923 3300025900 Bacteria 1019
81 Ga0207680_10245789 3300025903 Bacteria 1234
82 Ga0207705_10143265 3300025909 Bacteria 1786
83 Ga0207705_10382662 3300025909 Bacteria 1087
84 Ga0207705_10457399 3300025909 Bacteria 990
85 Ga0207707_10517915 3300025912 Bacteria 1016
86 Ga0207707_11033954 3300025912 Bacteria 673
87 Ga0207660_10333574 3300025917 Bacteria 1213
88 Ga0207662_10103415 3300025918 Bacteria 1767
89 Ga0207694_10526868 3300025924 Bacteria 990
90 Ga0207650_10514820 3300025925 Bacteria 1001
91 Ga0207700_10106216 3300025928 Bacteria 2250
92 Ga0207664_10004886 3300025929 Bacteria 9113
93 Ga0207664_10317762 3300025929 Bacteria 1373
94 Ga0207664_11386649 3300025929 Bacteria 623
95 Ga0207644_10013463 3300025931 Bacteria 5454
96 Ga0207686_10157178 3300025934 Bacteria 1590
97 Ga0207686_10394136 3300025934 Bacteria 1053
98 Ga0207691_10433995 3300025940 Bacteria 1119
99 Ga0207689_10247810 3300025942 Bacteria 1473
100 Ga0207667_10046308 3300025949 Bacteria 4605
101 Ga0207668_10017988 3300025972 Bacteria 4438
102 Ga0207668_10043342 3300025972 Bacteria 3053
103 Ga0207668_10089035 3300025972 Bacteria 2262
104 Ga0207668_10358234 3300025972 Bacteria 1222
105 Ga0207668_10560735 3300025972 Bacteria 991
106 Ga0207658_10119129 3300025986 Bacteria 2101
107 Ga0207658_10404580 3300025986 Bacteria 1200
108 Ga0207677_10362675 3300026023 Bacteria 1218
109 Ga0207703_10006123 3300026035 Bacteria 9628
110 Ga0207703_10286911 3300026035 Bacteria 1497
111 Ga0207678_10026789 3300026067 Bacteria 5028
112 Ga0207678_10121403 3300026067 Bacteria 2230
113 Ga0207708_10067757 3300026075 Bacteria 2731
114 Ga0207641_10003107 3300026088 Bacteria 14933
115 Ga0207641_10074781 3300026088 Bacteria 2923
116 Ga0207641_10224219 3300026088 Bacteria 1745
117 Ga0207641_10270754 3300026088 Bacteria 1594
118 Ga0207676_11183890 3300026095 Bacteria 757
119 Ga0207674_10072990 3300026116 Bacteria 3446
120 Ga0207683_10161494 3300026121 Bacteria 2026
121 Ga0268266_10001408 3300028379 Bacteria 28707
122 Ga0268266_10010227 3300028379 Bacteria 8217
123 Ga0268265_10955850 3300028380 Bacteria 844
124 Ga0268264_10000027 3300028381 Bacteria 440852
125 Ga0268264_10013248 3300028381 Bacteria 6788
126 Ga0268264_11323758 3300028381 Bacteria 731
127 Ga0307511_10000158 3300030521 Bacteria 65261
128 Ga0316176_1131355 3300030732 Bacteria 5379
129 Ga0314311_1259225 3300030733 Bacteria 2369
130 Ga0316178_1177353 3300030735 Bacteria 1113
131 Ga0316180_1099062 3300030736 Bacteria 1261
132 Ga0316180_1154171 3300030736 Bacteria 670
133 Ga0265327_10000041 3300031251 Bacteria 288506
134 Ga0307513_10012950 3300031456 Bacteria 10255
135 Ga0307513_10096033 3300031456 Bacteria 3003
136 Ga0307513_10607836 3300031456 Bacteria 802
137 Ga0316576_10021656 3300031727 Bacteria 4450
138 Ga0316578_10010505 3300031728 Bacteria 4808
139 Ga0316577_10071882 3300031733 Bacteria 1931
140 Ga0307413_10001759 3300031824 Bacteria 8476
141 Ga0307413_10103917 3300031824 Bacteria 1885
142 Ga0307518_10002075 3300031838 Bacteria 14723
143 Ga0307518_10021843 3300031838 Bacteria 4604
144 Ga0326468_10003407 3300031889 Bacteria 1346
145 Ga0307406_10408988 3300031901 Bacteria 1078
146 Ga0307406_10415627 3300031901 Bacteria 1070
147 Ga0307411_10004155 3300032005 Bacteria 6881
148 Ga0316583_10182192 3300032133 Bacteria 730
149 Ga0316593_10008756 3300032168 Bacteria 2835
150 Ga0307507_10002977 3300033179 Bacteria 33984
151 Ga0307507_10052678 3300033179 Bacteria 3897
152 Ga0307507_10078077 3300033179 Bacteria 2938
153 Ga0307510_10135581 3300033180 Bacteria 2120
154 Ga0316596_1015517 3300033541 Bacteria 1899
155 Ga0373956_0007282 3300035119 Bacteria 4455
156 Ga0316574_0015003 3300035398 Bacteria 4488
157 Ga0265778_000352 3300036457 Bacteria 3496
158 Ga0316582_0211165 3300036647 Bacteria 1326
159 Ga0316584_0017606 3300036712 Bacteria 5143
160 Ga0395900_0310794 3300037418 Bacteria 1559
161 Ga0395900_0342495 3300037418 Bacteria 1470
162 Ga0395898_0078592 3300037466 Bacteria 3183
163 Ga0395898_0337088 3300037466 Bacteria 1438
164 Ga0436364_0551636 3300037853 Bacteria 24078
165 Ga0436364_0644430 3300037853 Bacteria 897
166 Ga0436364_0836397 3300037853 Bacteria 10865
167 Ga0395901_0011901 3300038443 Bacteria 8824
168 Ga0395901_0927356 3300038443 Bacteria 851
169 Ga0436365_0872748 3300039437 Bacteria 5020
170 Ga0436365_1716384 3300039437 Bacteria 2584
171 Ga0436362_0543778 3300039453 Bacteria 67112
172 Ga0451800_1207784 3300041459 Bacteria 756
173 Ga0466969_0016038 3300044656 Bacteria 3926
174 Ga0466972_0003686 3300044658 Bacteria 7622
175 Ga0466965_0003581 3300044683 Bacteria 6837
176 Ga0466965_0007919 3300044683 Bacteria 4899
177 Ga0466965_0023659 3300044683 Bacteria 2967
178 Ga0466966_0004119 3300044684 Bacteria 9605
179 Ga0466966_0092834 3300044684 Bacteria 1872
180 Ga0466966_0227264 3300044684 Bacteria 1126
181 Ga0466961_0007426 3300044693 Bacteria 6977
182 Ga0466961_0118158 3300044693 Bacteria 1666
183 Ga0466963_0025158 3300044694 Bacteria 3795
184 Ga0466963_0378564 3300044694 Bacteria 998
185 Ga0466964_0038779 3300044706 Bacteria 1917
186 Ga0466971_0003927 3300044719 Bacteria 6381
187 Ga0466971_0131545 3300044719 Bacteria 1162
188 Ga0466968_0006318 3300044735 Bacteria 4462
189 Ga0466968_0062069 3300044735 Bacteria 1613
190 Ga0466968_0086853 3300044735 Bacteria 1381
191 Ga0466970_0001868 3300044765 Bacteria 10183
192 Ga0466970_0068508 3300044765 Bacteria 1906
193 Ga0466957_0000788 3300044842 Bacteria 16194
194 Ga0466957_0132463 3300044842 Bacteria 1599
195 Ga0466960_0002591 3300044901 Bacteria 6800
196 Ga0466960_0002941 3300044901 Bacteria 6489
197 Ga0466960_0090731 3300044901 Bacteria 1557
198 Ga0466960_0130742 3300044901 Bacteria 1324
199 Ga0466960_0165195 3300044901 Bacteria 1191
200 Ga0466959_0064222 3300045049 Bacteria 2665
201 Ga0466959_0365397 3300045049 Bacteria 983
202 Ga0466958_0000335 3300045836 Bacteria 18707
203 Ga0466967_0026211 3300045976 Bacteria 4823
204 Ga0466967_0068122 3300045976 Bacteria 3177
205 Ga0466967_0075587 3300045976 Bacteria 3028
206 Ga0466967_0076602 3300045976 Bacteria 3009
207 Ga0466967_0745027 3300045976 Bacteria 971
208 Ga0466967_1175609 3300045976 Bacteria 764
209 Ga0495603_0207661 3300046455 Bacteria 1131
210 Ga0495629_0055661 3300046459 Bacteria 2766
211 Ga0495641_0061622 3300046461 Bacteria 1693
212 Ga0495641_0070010 3300046461 Bacteria 1576
213 Ga0495651_0322360 3300046462 Bacteria 1030
214 Ga0495639_0379367 3300046475 Bacteria 712
215 Ga0495664_0245476 3300046477 Bacteria 1083
216 Ga0495608_0112833 3300046511 Bacteria 1747
217 Ga0495628_0401792 3300046516 Bacteria 1001
218 Ga0495645_0572981 3300046543 Bacteria 697
219 Ga0495635_0360957 3300046663 Bacteria 968
220 Ga0495635_0469822 3300046663 Bacteria 830
221 Ga0495647_0111055 3300046681 Bacteria 1144
222 Ga0495658_0177672 3300046683 Bacteria 1320
223 Ga0495613_0257841 3300046689 Bacteria 1216
224 Ga0495600_0304739 3300046809 Bacteria 1004
225 Ga0495674_0189922 3300047319 Bacteria 1708
226 Ga0495593_0290105 3300047673 Bacteria 818
227 Ga0495602_0085553 3300048088 Bacteria 2635
228 Ga0495602_0207786 3300048088 Bacteria 1489
229 Ga0495614_0185636 3300048089 Bacteria 937
230 Ga0496100_0100585 3300048903 Bacteria 1992
231 Ga0496101_0011477 3300048904 Bacteria 5880
232 Ga0496102_0000042 3300048905 Bacteria 196538
233 Ga0496102_0000639 3300048905 Bacteria 35597
234 Ga0496102_0001496 3300048905 Bacteria 20647
235 Ga0496102_0026358 3300048905 Bacteria 5184
236 Ga0496103_0000194 3300048906 Bacteria 60666
237 Ga0496103_0299255 3300048906 Bacteria 1035
238 Ga0496103_0362290 3300048906 Bacteria 932
239 Ga0496104_0003077 3300048907 Bacteria 14373
240 Ga0496104_0231633 3300048907 Bacteria 1759
241 Ga0496104_0506650 3300048907 Bacteria 1118
242 Ga0496105_0190649 3300048908 Bacteria 1676
243 Ga0496105_0205531 3300048908 Bacteria 1606
244 Ga0496105_0233438 3300048908 Bacteria 1494
245 Ga0496106_0656631 3300048909 Bacteria 838
246 Ga0496108_0004898 3300048911 Bacteria 10808
247 Ga0496109_0003951 3300048912 Bacteria 12387
248 Ga0496109_0055508 3300048912 Bacteria 3614
249 Ga0496110_0060247 3300048913 Bacteria 3346
250 Ga0496110_0642828 3300048913 Bacteria 960
251 Ga0496111_0007745 3300048914 Bacteria 7067
252 Ga0496112_0265115 3300048915 Bacteria 1667
253 Ga0496113_0014883 3300048916 Bacteria 5324
254 Ga0496114_0007036 3300048917 Bacteria 8877
255 Ga0496114_0013660 3300048917 Bacteria 6510
256 Ga0496114_0020759 3300048917 Bacteria 5333
257 Ga0496114_0146316 3300048917 Bacteria 2048
258 Ga0496114_0153797 3300048917 Bacteria 1996
259 Ga0496114_0174267 3300048917 Bacteria 1876
260 Ga0496115_0891473 3300048918 Bacteria 686
261 Ga0496116_0000464 3300048919 Bacteria 56167
262 Ga0496117_0000339 3300048920 Bacteria 82597
263 Ga0496118_0000241 3300048921 Bacteria 96484
264 Ga0496119_0008061 3300048922 Bacteria 9350
265 Ga0496119_0040227 3300048922 Bacteria 2993
266 Ga0496120_0011730 3300048923 Bacteria 6007
267 Ga0496120_0020475 3300048923 Bacteria 4202
268 Ga0496121_0213766 3300048924 Bacteria 1364
269 Ga0496124_0016592 3300048927 Bacteria 6989
270 Ga0496125_0012164 3300048928 Bacteria 8563
271 Ga0496126_0000006 3300048929 Bacteria 798804
272 Ga0496126_0001408 3300048929 Bacteria 38053
273 Ga0501317_022708 3300049533 Bacteria 861
274 Ga0501318_005441 3300049534 Bacteria 1263
275 Ga0501068_0643575 3300049584 Bacteria 692
276 Ga0501077_0110352 3300049593 Bacteria 1743
277 Ga0501035_0249319 3300049822 Bacteria 1508
278 nmdc:mga09592_99069_c1 3300050508 Bacteria 2495
279 nmdc:mga06r32_86_c10 3300050510 Bacteria 8352
280 Ga0495595_0289616 3300053084 Bacteria 823
281 Ga0495619_0825380 3300053085 Bacteria 626
282 Ga0500559_0195038 3300053136 Bacteria 954
283 Ga0587073_0113915 3300059492 Bacteria 721
284 Ga0587113_018975 3300059625 Bacteria 709
285 Ga0587076_075927 3300059645 Bacteria 707
286 Ga0501082_0088395 3300060353 Bacteria 2674
287 Ga0466962_0000237 3300061719 Bacteria 23010
288 Ga0466962_0067386 3300061719 Bacteria 1709
289 Ga0466962_0109161 3300061719 Bacteria 1332
290 2548697844 2547132424 Bacteria 8348532
291 2559429653 2558860280 Bacteria 11429938
292 2583150456 2582580736 Bacteria 5325865
293 2586059326 2585427649 Bacteria 9053857
294 2623502041 2622736605 Bacteria 4992138
295 2753070766 2751185734 Bacteria 8863695
296 2791915400 2791354901 Bacteria 8322202
297 2795783464 2795385470 Bacteria 8317180
298 2795795833 2795385472 Bacteria 6627535
299 2809591916 2808606522 Bacteria 9488490
300 2816504629 2816332139 Bacteria 9138787
301 2866616866 2866612099 Bacteria 7543886
302 2870726665 2870721527 Bacteria 9689237
303 2891327607 2891326441 Bacteria 6439512
304 2899373324 2899370129 Bacteria 6781179
305 2915361700 2915358134 Bacteria 6050864
306 2915773352 2915768154 Bacteria 8424322
307 2917738951 2917736166 Bacteria 9690793
308 2919715982 2919713450 Bacteria 7431245
309 8003322489 8003314358 Bacteria 10575343
310 8047718050 8047710418 Bacteria 11023148
311 8054472731 8054472261 Bacteria 7464355
312 8056212021 8056207758 Bacteria 8639239
313 Ga0207663_10599409
314 CNBas_1005384
315 JGI24739J22299_10123591
316 JGI24735J21928_10084602
317 Ga0070658_10234608
318 Ga0070658_10555478
319 Ga0070683_100152774
320 Ga0070666_10373211
321 Ga0070680_100659112
322 Ga0070668_100166048
323 Ga0070668_100217430
324 Ga0070668_100304275
325 Ga0070671_100046130
326 Ga0070674_100252073
327 Ga0070667_100431522
328 Ga0070714_100011545
329 Ga0070713_100059495
330 Ga0070710_10002585
331 Ga0070685_10481870
332 Ga0070699_100417548
333 Ga0070665_100008100
334 Ga0068855_100416169
335 Ga0068863_100004003
336 Ga0068863_100071402
337 Ga0068858_100001367
338 Ga0068860_100000124
339 Ga0068860_100017208
340 Ga0081455_10001024
341 Ga0081455_10042944
342 Ga0081538_10137516
343 Ga0081539_10054333
344 Ga0070717_10402414
345 Ga0075429_100186793
346 Ga0097620_100019694
347 Ga0105251_10099258
348 Ga0105247_10042151
349 Ga0105247_10195041
350 Ga0105247_10257081
351 Ga0105247_10273213
352 Ga0114129_11696196
353 Ga0105243_10363294
354 Ga0105242_10438333
355 Ga0157374_10360120
356 Ga0157378_11745327
357 Ga0157372_10000044
358 Ga0157375_10365912
359 Ga0157379_10124626
360 Ga0157379_10257650
361 Ga0163161_10378408
362 Ga0197907_10612147
363 Ga0197907_11438634
364 Ga0206356_10306179
365 Ga0206356_11065743
366 Ga0206356_11844548
367 Ga0206349_1697418
368 Ga0206352_10095744
369 Ga0206352_11235241
370 Ga0206350_10345732
371 Ga0206350_10898709
372 Ga0206354_10593073
373 Ga0206354_10857348
374 Ga0206353_10183636
375 Ga0206353_10255053
376 Ga0206353_10488111
377 Ga0206353_11353908
378 Ga0206353_11831659
379 Ga0213873_10000089
380 Ga0213876_10003994
381 Ga0213875_10000035
382 Ga0213875_10180513
383 Ga0224712_10002926
384 Ga0224712_10058478
385 Ga0224712_10101937
386 Ga0224712_10123549
387 Ga0224712_10184943
388 Ga0224712_10299203
389 Ga0207692_10000124
390 Ga0207692_10250282
391 Ga0207710_10018571
392 Ga0207710_10186923
393 Ga0207680_10245789
394 Ga0207705_10143265
395 Ga0207705_10382662
396 Ga0207705_10457399
397 Ga0207707_10517915
398 Ga0207707_11033954
399 Ga0207660_10333574
400 Ga0207662_10103415
401 Ga0207694_10526868
402 Ga0207650_10514820
403 Ga0207700_10106216
404 Ga0207664_10004886
405 Ga0207664_10317762
406 Ga0207664_11386649
407 Ga0207644_10013463
408 Ga0207686_10157178
409 Ga0207686_10394136
410 Ga0207691_10433995
411 Ga0207689_10247810
412 Ga0207667_10046308
413 Ga0207668_10017988
414 Ga0207668_10043342
415 Ga0207668_10089035
416 Ga0207668_10358234
417 Ga0207668_10560735
418 Ga0207658_10119129
419 Ga0207658_10404580
420 Ga0207677_10362675
421 Ga0207703_10006123
422 Ga0207703_10286911
423 Ga0207678_10026789
424 Ga0207678_10121403
425 Ga0207708_10067757
426 Ga0207641_10003107
427 Ga0207641_10074781
428 Ga0207641_10224219
429 Ga0207641_10270754
430 Ga0207676_11183890
431 Ga0207674_10072990
432 Ga0207683_10161494
433 Ga0268266_10001408
434 Ga0268266_10010227
435 Ga0268265_10955850
436 Ga0268264_10000027
437 Ga0268264_10013248
438 Ga0268264_11323758
439 Ga0307511_10000158
440 Ga0316176_1131355
441 Ga0314311_1259225
442 Ga0316178_1177353
443 Ga0316180_1099062
444 Ga0316180_1154171
445 Ga0265327_10000041
446 Ga0307513_10012950
447 Ga0307513_10096033
448 Ga0307513_10607836
449 Ga0316576_10021656
450 Ga0316578_10010505
451 Ga0316577_10071882
452 Ga0307413_10001759
453 Ga0307413_10103917
454 Ga0307518_10002075
455 Ga0307518_10021843
456 Ga0326468_10003407
457 Ga0307406_10408988
458 Ga0307406_10415627
459 Ga0307411_10004155
460 Ga0316583_10182192
461 Ga0316593_10008756
462 Ga0307507_10002977
463 Ga0307507_10052678
464 Ga0307507_10078077
465 Ga0307510_10135581
466 Ga0316596_1015517
467 Ga0373956_0007282
468 Ga0316574_0015003
469 Ga0265778_000352
470 Ga0316582_0211165
471 Ga0316584_0017606
472 Ga0395900_0310794
473 Ga0395900_0342495
474 Ga0395898_0078592
475 Ga0395898_0337088
476 Ga0436364_0551636
477 Ga0436364_0644430
478 Ga0436364_0836397
479 Ga0395901_0011901
480 Ga0395901_0927356
481 Ga0436365_0872748
482 Ga0436365_1716384
483 Ga0436362_0543778
484 Ga0451800_1207784
485 Ga0466969_0016038
486 Ga0466972_0003686
487 Ga0466965_0003581
488 Ga0466965_0007919
489 Ga0466965_0023659
490 Ga0466966_0004119
491 Ga0466966_0092834
492 Ga0466966_0227264
493 Ga0466961_0007426
494 Ga0466961_0118158
495 Ga0466963_0025158
496 Ga0466963_0378564
497 Ga0466964_0038779
498 Ga0466971_0003927
499 Ga0466971_0131545
500 Ga0466968_0006318
501 Ga0466968_0062069
502 Ga0466968_0086853
503 Ga0466970_0001868
504 Ga0466970_0068508
505 Ga0466957_0000788
506 Ga0466957_0132463
507 Ga0466960_0002591
508 Ga0466960_0002941
509 Ga0466960_0090731
510 Ga0466960_0130742
511 Ga0466960_0165195
512 Ga0466959_0064222
513 Ga0466959_0365397
514 Ga0466958_0000335
515 Ga0466967_0026211
516 Ga0466967_0068122
517 Ga0466967_0075587
518 Ga0466967_0076602
519 Ga0466967_0745027
520 Ga0466967_1175609
521 Ga0495603_0207661
522 Ga0495629_0055661
523 Ga0495641_0061622
524 Ga0495641_0070010
525 Ga0495651_0322360
526 Ga0495639_0379367
527 Ga0495664_0245476
528 Ga0495608_0112833
529 Ga0495628_0401792
530 Ga0495645_0572981
531 Ga0495635_0360957
532 Ga0495635_0469822
533 Ga0495647_0111055
534 Ga0495658_0177672
535 Ga0495613_0257841
536 Ga0495600_0304739
537 Ga0495674_0189922
538 Ga0495593_0290105
539 Ga0495602_0085553
540 Ga0495602_0207786
541 Ga0495614_0185636
542 Ga0496100_0100585
543 Ga0496101_0011477
544 Ga0496102_0000042
545 Ga0496102_0000639
546 Ga0496102_0001496
547 Ga0496102_0026358
548 Ga0496103_0000194
549 Ga0496103_0299255
550 Ga0496103_0362290
551 Ga0496104_0003077
552 Ga0496104_0231633
553 Ga0496104_0506650
554 Ga0496105_0190649
555 Ga0496105_0205531
556 Ga0496105_0233438
557 Ga0496106_0656631
558 Ga0496108_0004898
559 Ga0496109_0003951
560 Ga0496109_0055508
561 Ga0496110_0060247
562 Ga0496110_0642828
563 Ga0496111_0007745
564 Ga0496112_0265115
565 Ga0496113_0014883
566 Ga0496114_0007036
567 Ga0496114_0013660
568 Ga0496114_0020759
569 Ga0496114_0146316
570 Ga0496114_0153797
571 Ga0496114_0174267
572 Ga0496115_0891473
573 Ga0496116_0000464
574 Ga0496117_0000339
575 Ga0496118_0000241
576 Ga0496119_0008061
577 Ga0496119_0040227
578 Ga0496120_0011730
579 Ga0496120_0020475
580 Ga0496121_0213766
581 Ga0496124_0016592
582 Ga0496125_0012164
583 Ga0496126_0000006
584 Ga0496126_0001408
585 Ga0501317_022708
586 Ga0501318_005441
587 Ga0501068_0643575
588 Ga0501077_0110352
589 Ga0501035_0249319
590 nmdc:mga09592_99069_c1
591 nmdc:mga06r32_86_c10
592 Ga0495595_0289616
593 Ga0495619_0825380
594 Ga0500559_0195038
595 Ga0587073_0113915
596 Ga0587113_018975
597 Ga0587076_075927
598 Ga0501082_0088395
599 Ga0466962_0000237
600 Ga0466962_0067386
601 Ga0466962_0109161
602 2548697844
603 2559429653
604 2583150456
605 2586059326
606 2623502041
607 2753070766
608 2791915400
609 2795783464
610 2795795833
611 2809591916
612 2816504629
613 2866616866
614 2870726665
615 2891327607
616 2899373324
617 2915361700
618 2915773352
619 2917738951
620 2919715982
621 8003322489
622 8047718050
623 8054472731
624 8056212021

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01765

RRF

Ribosome recycling factor

51

214

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ise-assembly1.cif.gz_A crystal structure of a mutant of ribosome recycling factor from escherichia coli, arg132gly 0.9657 3 185
4v9d-assembly1.cif.gz_AY structures of the bacterial ribosome in classical and hybrid states of trna binding 0.9587 1 183
1is1-assembly1.cif.gz_A crystal structure of ribosome recycling factor from vibrio parahaemolyticus 0.9586 1 185
1ise-assembly1.cif.gz_A crystal structure of a mutant of ribosome recycling factor from escherichia coli, arg132gly 0.9556 3 185
3lf9-assembly1.cif.gz_A crystal structure of hiv epitope-scaffold 4e10_d0_1is1a_001_c 0.9549 1 185
ID Description Score Start End Superfamily
af_P9WGY1_31_105_3.30.1360.40 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2; 1.003 31 105 3.30.1360.40
1wqhA01 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4;Ribosome-recycling factor 0.9917 3 183 1.10.132.20
af_P9WGY1_31_105_3.30.1360.40 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2; 0.9896 31 105 3.30.1360.40
4kawX01 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4;Ribosome-recycling factor 0.9891 3 183 1.10.132.20
4kb2A01 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4;Ribosome-recycling factor 0.9876 1 183 1.10.132.20
ID Description Score Start End GO Terms
AF-A0A7C9LDS9-F1-model_v4 Ribosome-recycling factor (RRF) (Ribosome-releasing factor) 0.9846 1 185 GO:0002184
GO:0005829
GO:0043023
AF-A0A089PX43-F1-model_v4 Ribosome-recycling factor (RRF) (Ribosome-releasing factor) 0.9831 1 185 GO:0002184
GO:0005829
GO:0043023
AF-A0A0J5P4C9-F1-model_v4 Ribosome-recycling factor (RRF) (Ribosome-releasing factor) 0.9799 1 185 GO:0002184
GO:0005829
GO:0043023
AF-A0A0A3AUM4-F1-model_v4 Ribosome-recycling factor (RRF) (Ribosome-releasing factor) 0.9798 1 185 GO:0002184
GO:0005829
GO:0043023
AF-A0A1Y4DDG2-F1-model_v4 Ribosome-recycling factor (RRF) (Ribosome-releasing factor) 0.9788 3 185 GO:0005737
GO:0006415
GO:0043023

Map