F400652

General Info

Members Datasets Scaffolds Average Seq Length
310 218 620 282

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10073661|Ga0075364_100736612
Length 325
Sequence VPGADDRLLASAVCFCFDSMLLLLLRLFARLPLRVLHALGRFFGRLIYMLPGRYRTRLQANATQAGYDDPAFWRRAAAETGAMIFETPKVWLHEAACLRVSTVANLDVYEQARATGRGILFLTPHLGCFEVSARTMALHQPMTVMFREPRSALLRPVMEVARSNSVLRAVPATTRGVRDFVRTLRRGEAIGMLPDQVPGQGEGVWADVFGRPAYTVTLPGRLAQQTGVVILMAACERLPKGAGWRIHFERVPDPLPTDPKEQADLINAAMEKLIRRFPEQYLWSYHRYKVPKGARAVPPDDTGAHAGGTPAEALRDHHDHDHHRQ

Samples

Sample ID Description Type Environment
1 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
6 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
7 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
8 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
9 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
36 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
37 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
51 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
54 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
61 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
63 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
89 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
94 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
95 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
96 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
97 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
98 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
101 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
102 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
105 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
108 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
109 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
110 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
115 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
116 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
117 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
118 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
119 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
120 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
121 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
122 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
123 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
124 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
125 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
128 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
129 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
130 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
131 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
132 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
133 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
134 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
135 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
136 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
137 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
138 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
139 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
140 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
141 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
142 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
143 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
144 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
145 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
146 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
147 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
148 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
149 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
150 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
151 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
152 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
153 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
154 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
155 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
156 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
157 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
158 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
159 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
160 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
161 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
162 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
163 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
164 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
165 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
166 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
167 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
168 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
169 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
170 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
171 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
172 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
173 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
174 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
175 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
176 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
177 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
178 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
179 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
185 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
186 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
189 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
190 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
191 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
192 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
193 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
194 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
195 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
196 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
197 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
198 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
199 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
200 2547132374 Acidovorax radicis N35 Isolate Unclassified
201 2643221570 Acidovorax sp. Root568 Isolate Unclassified
202 2643221596 Acidovorax sp. Root70 Isolate Unclassified
203 2643221609 Acidovorax sp. Root217 Isolate Unclassified
204 2643221611 Acidovorax sp. Root219 Isolate Unclassified
205 2643221652 Acidovorax sp. Root402 Isolate Unclassified
206 2643221717 Acidovorax sp. Root267 Isolate Unclassified
207 2738543012 Acidovorax sp. CF301 Isolate Unclassified
208 2816332133 Acidovorax radicis 2721A Isolate Unclassified
209 2818991436 Collimonas arenae 515 Isolate Unclassified
210 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
211 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
212 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
213 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
214 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
215 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
216 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
217 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
218 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.87
Metatranscriptomes 0
Isolates 6.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.32
Nodule 0.97
Rhizoplane 1.61
Rhizosphere 75.81
Stem 0
Stem Tuber 0
Unclassified 0.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075364_10073661 3300006051 Bacteria 2251
2 JGI25162J39368_1000148 3300002737 Bacteria 76611
3 JGI25164J39214_1006220 3300002772 Bacteria 1260
4 JGI25165J46597_1000030 3300003214 Bacteria 305254
5 Ga0055538_1000017 3300003751 Bacteria 305254
6 Ga0055539_1000022 3300003752 Bacteria 305254
7 Ga0055533_1000030 3300003756 Bacteria 305254
8 Ga0055525_1000034 3300003759 Bacteria 305254
9 Ga0055541_1000015 3300003841 Bacteria 305254
10 Ga0070658_10390999 3300005327 Bacteria 1194
11 Ga0070676_10005197 3300005328 Bacteria 6915
12 Ga0070670_100111027 3300005331 Bacteria 2362
13 Ga0068869_100375179 3300005334 Bacteria 1165
14 Ga0068868_100037290 3300005338 Bacteria 3767
15 Ga0068868_100056984 3300005338 Bacteria 3086
16 Ga0068868_100060431 3300005338 Bacteria 3000
17 Ga0070675_100263298 3300005354 Bacteria 1511
18 Ga0070675_100415453 3300005354 Bacteria 1202
19 Ga0070671_100063448 3300005355 Bacteria 3076
20 Ga0070671_100267672 3300005355 Bacteria 1452
21 Ga0070671_100308099 3300005355 Bacteria 1348
22 Ga0070667_100004788 3300005367 Bacteria 11336
23 Ga0070678_100085179 3300005456 Bacteria 2408
24 Ga0070678_100344435 3300005456 Bacteria 1280
25 Ga0068867_100000392 3300005459 Bacteria 29217
26 Ga0068867_100054454 3300005459 Bacteria 2956
27 Ga0068853_100042632 3300005539 Bacteria 3881
28 Ga0068853_100070506 3300005539 Bacteria 3042
29 Ga0068853_100435721 3300005539 Bacteria 1231
30 Ga0070672_100291485 3300005543 Bacteria 1382
31 Ga0070672_100292744 3300005543 Bacteria 1379
32 Ga0068857_100356491 3300005577 Bacteria 1355
33 Ga0068856_100042724 3300005614 Bacteria 4460
34 Ga0068852_100013991 3300005616 Bacteria 6156
35 Ga0068864_100008061 3300005618 Bacteria 8687
36 Ga0068863_100178979 3300005841 Bacteria 2035
37 Ga0075364_10003711 3300006051 Bacteria 8712
38 Ga0075364_10085680 3300006051 Bacteria 2087
39 Ga0070716_100026748 3300006173 Bacteria 3092
40 Ga0075362_10077289 3300006177 Bacteria 1529
41 Ga0075366_10061639 3300006195 Bacteria 2229
42 Ga0075366_10088950 3300006195 Bacteria 1849
43 Ga0075428_100246808 3300006844 Bacteria 1925
44 Ga0075430_100012873 3300006846 Bacteria 7129
45 Ga0075430_100153688 3300006846 Bacteria 1916
46 Ga0075429_100000224 3300006880 Bacteria 38311
47 Ga0075429_100116850 3300006880 Bacteria 2331
48 Ga0068865_100151753 3300006881 Bacteria 1758
49 Ga0075436_100149782 3300006914 Bacteria 1642
50 Ga0075436_100256150 3300006914 Bacteria 1247
51 Ga0079104_1000016 3300006946 Bacteria 313865
52 Ga0099794_10031614 3300007265 Bacteria 2480
53 Ga0105244_10126565 3300009036 Bacteria 1234
54 Ga0105240_10042171 3300009093 Bacteria 5817
55 Ga0105240_10326144 3300009093 Bacteria 1748
56 Ga0105245_10326834 3300009098 Bacteria 1512
57 Ga0105243_10015629 3300009148 Bacteria 5738
58 Ga0105242_10005758 3300009176 Bacteria 9548
59 Ga0105248_10005965 3300009177 Bacteria 13384
60 Ga0105237_10018091 3300009545 Bacteria 7299
61 Ga0105238_10098567 3300009551 Bacteria 2907
62 Ga0105239_10313821 3300010375 Bacteria 1767
63 Ga0157378_10142097 3300013297 Bacteria 2229
64 Ga0157375_10061114 3300013308 Bacteria 3739
65 Ga0157377_10000034 3300014745 Bacteria 117744
66 Ga0157376_10033729 3300014969 Bacteria 4125
67 Ga0182007_10019034 3300015262 Bacteria 2475
68 Ga0182005_1000142 3300015265 Bacteria 50650
69 Ga0163161_10281729 3300017792 Bacteria 1304
70 Ga0213872_10046783 3300021361 Bacteria 1968
71 Ga0209784_100034 3300025224 Bacteria 305504
72 Ga0209566_100038 3300025225 Bacteria 305504
73 Ga0209674_100056 3300025226 Bacteria 305504
74 Ga0209672_105825 3300025228 Bacteria 2072
75 Ga0209563_100057 3300025230 Bacteria 305604
76 Ga0207427_100853 3300025231 Bacteria 13563
77 Ga0209437_100071 3300025233 Bacteria 305604
78 Ga0209677_100035 3300025253 Bacteria 305504
79 Ga0209233_1000094 3300025261 Bacteria 305604
80 Ga0207696_1002531 3300025711 Bacteria 8922
81 Ga0207682_10001172 3300025893 Bacteria 12163
82 Ga0207645_10021350 3300025907 Bacteria 4222
83 Ga0207707_10088650 3300025912 Bacteria 2703
84 Ga0207695_10232247 3300025913 Bacteria 1748
85 Ga0207671_10003773 3300025914 Bacteria 14891
86 Ga0207644_10076448 3300025931 Bacteria 2463
87 Ga0207644_10206033 3300025931 Bacteria 1553
88 Ga0207706_10037247 3300025933 Bacteria 4320
89 Ga0207686_10031224 3300025934 Bacteria 3160
90 Ga0207709_10000117 3300025935 Bacteria 122667
91 Ga0207669_10005731 3300025937 Bacteria 5603
92 Ga0207704_10378430 3300025938 Bacteria 1111
93 Ga0207665_10012383 3300025939 Bacteria 5603
94 Ga0207691_10145753 3300025940 Bacteria 2084
95 Ga0207691_10262932 3300025940 Bacteria 1487
96 Ga0207711_10025563 3300025941 Bacteria 4952
97 Ga0207689_10253297 3300025942 Bacteria 1456
98 Ga0207689_10262499 3300025942 Bacteria 1429
99 Ga0207667_10455411 3300025949 Bacteria 1300
100 Ga0207651_10230332 3300025960 Bacteria 1504
101 Ga0207677_10016092 3300026023 Bacteria 4420
102 Ga0207677_10068822 3300026023 Bacteria 2487
103 Ga0207677_10082035 3300026023 Bacteria 2316
104 Ga0207639_10145487 3300026041 Bacteria 1979
105 Ga0207678_10167797 3300026067 Bacteria 1874
106 Ga0207648_10000106 3300026089 Bacteria 80894
107 Ga0207648_10047535 3300026089 Bacteria 3761
108 Ga0207648_10154871 3300026089 Bacteria 2023
109 Ga0207674_10252116 3300026116 Bacteria 1712
110 Ga0207683_10217617 3300026121 Bacteria 1740
111 Ga0207698_10027890 3300026142 Bacteria 4017
112 Ga0209281_1000017 3300027111 Bacteria 583251
113 Ga0209974_10026622 3300027876 Bacteria 1914
114 Ga0268264_10740539 3300028381 Bacteria 979
115 Ga0307517_10012331 3300028786 Bacteria 11744
116 Ga0307515_10000292 3300028794 Bacteria 123160
117 Ga0307515_10010714 3300028794 Bacteria 17519
118 Ga0307515_10107356 3300028794 Bacteria 3301
119 Ga0307515_10183659 3300028794 Bacteria 2030
120 Ga0265330_10000091 3300031235 Bacteria 76638
121 Ga0265332_10000028 3300031238 Bacteria 184029
122 Ga0265325_10009426 3300031241 Bacteria 5698
123 Ga0265340_10021521 3300031247 Bacteria 3308
124 Ga0307513_10019952 3300031456 Bacteria 7962
125 Ga0307509_10001003 3300031507 Bacteria 48532
126 Ga0307509_10281811 3300031507 Bacteria 1423
127 Ga0307509_10315770 3300031507 Bacteria 1302
128 Ga0307408_100000263 3300031548 Bacteria 53454
129 Ga0307508_10000028 3300031616 Bacteria 168639
130 Ga0307508_10001377 3300031616 Bacteria 27383
131 Ga0307514_10000369 3300031649 Bacteria 102951
132 Ga0316575_10000063 3300031665 Bacteria 26008
133 Ga0265314_10000054 3300031711 Bacteria 184029
134 Ga0307516_10002006 3300031730 Bacteria 27820
135 Ga0307406_10002039 3300031901 Bacteria 11025
136 Ga0307412_10105259 3300031911 Bacteria 2004
137 Ga0307412_10290617 3300031911 Bacteria 1287
138 Ga0307510_10001817 3300033180 Bacteria 23867
139 Ga0373938_0017278 3300034957 Bacteria 1419
140 Ga0373932_0039188 3300035112 Bacteria 1358
141 Ga0373931_0017494 3300035691 Bacteria 3548
142 Ga0373931_0057703 3300035691 Unclassified 2083
143 Ga0373937_0030441 3300036401 Bacteria 4889
144 Ga0395899_0008307 3300037312 Bacteria 7991
145 Ga0395900_0000482 3300037418 Bacteria 56524
146 Ga0395898_0007442 3300037466 Bacteria 11622
147 Ga0395898_0009206 3300037466 Bacteria 10393
148 Ga0395898_0016477 3300037466 Bacteria 7559
149 Ga0395898_0030958 3300037466 Bacteria 5350
150 Ga0395905_0000027 3300037471 Bacteria 297239
151 Ga0395905_0001600 3300037471 Bacteria 26922
152 Ga0395905_0004633 3300037471 Bacteria 14224
153 Ga0395905_0005520 3300037471 Bacteria 12901
154 Ga0395905_0010741 3300037471 Bacteria 8877
155 Ga0395905_0038542 3300037471 Bacteria 4485
156 Ga0395905_0051590 3300037471 Bacteria 3853
157 Ga0395905_0057161 3300037471 Bacteria 3649
158 Ga0395905_0205739 3300037471 Bacteria 1845
159 Ga0395905_0321032 3300037471 Bacteria 1438
160 Ga0395905_0353100 3300037471 Bacteria 1362
161 Ga0395905_0386957 3300037471 Bacteria 1293
162 Ga0395905_0433767 3300037471 Bacteria 1211
163 Ga0395901_0021285 3300038443 Bacteria 6642
164 Ga0395901_0038333 3300038443 Bacteria 4956
165 Ga0395901_0085490 3300038443 Bacteria 3298
166 Ga0395901_0085902 3300038443 Bacteria 3289
167 Ga0395901_0205521 3300038443 Bacteria 2063
168 Ga0395901_0258549 3300038443 Bacteria 1812
169 Ga0395901_0329826 3300038443 Bacteria 1578
170 Ga0436365_0020950 3300039437 Bacteria 926
171 Ga0436361_1149592 3300039447 Bacteria 17234
172 Ga0439461_0014587 3300041410 Bacteria 1497
173 Ga0451853_3891783 3300041512 Bacteria 1105
174 Ga0450923_031057 3300042125 Bacteria 1089
175 Ga0450898_007972 3300042134 Bacteria 1661
176 Ga0439459_0021475 3300042438 Bacteria 1240
177 Ga0439464_0038990 3300042439 Bacteria 1350
178 Ga0439460_0113696 3300042461 Bacteria 880
179 Ga0451577_0007365 3300042876 Bacteria 10803
180 Ga0451577_0007943 3300042876 Bacteria 10364
181 Ga0466969_0000018 3300044656 Bacteria 102911
182 Ga0466969_0015783 3300044656 Bacteria 3958
183 Ga0466969_0024502 3300044656 Bacteria 3103
184 Ga0466969_0045750 3300044656 Bacteria 2171
185 Ga0466972_0005822 3300044658 Bacteria 6180
186 Ga0453683_0003537 3300044673 Bacteria 11484
187 Ga0453683_0008354 3300044673 Bacteria 6950
188 Ga0466965_0038605 3300044683 Bacteria 2346
189 Ga0466965_0059282 3300044683 Bacteria 1910
190 Ga0466966_0001948 3300044684 Bacteria 13354
191 Ga0466966_0006064 3300044684 Bacteria 7981
192 Ga0466966_0028624 3300044684 Bacteria 3627
193 Ga0466966_0058096 3300044684 Bacteria 2445
194 Ga0466966_0258808 3300044684 Bacteria 1048
195 Ga0466961_0053828 3300044693 Bacteria 2567
196 Ga0466961_0055150 3300044693 Bacteria 2534
197 Ga0466961_0063601 3300044693 Bacteria 2344
198 Ga0466961_0072968 3300044693 Bacteria 2176
199 Ga0466963_0021472 3300044694 Bacteria 4073
200 Ga0466963_0389640 3300044694 Bacteria 982
201 Ga0466964_0058546 3300044706 Bacteria 1597
202 Ga0453684_0027068 3300044712 Bacteria 8243
203 Ga0453684_0032472 3300044712 Bacteria 7305
204 Ga0466970_0139695 3300044765 Bacteria 1334
205 Ga0466970_0153681 3300044765 Bacteria 1271
206 Ga0466957_0137314 3300044842 Bacteria 1572
207 Ga0466960_0037789 3300044901 Bacteria 2266
208 Ga0466960_0112406 3300044901 Bacteria 1417
209 Ga0466960_0158448 3300044901 Bacteria 1214
210 Ga0466959_0007310 3300045049 Bacteria 7741
211 Ga0466959_0056937 3300045049 Bacteria 2851
212 Ga0466959_0110540 3300045049 Bacteria 1961
213 Ga0466959_0430524 3300045049 Bacteria 895
214 Ga0451576_0096410 3300045051 Bacteria 3077
215 Ga0451576_0143037 3300045051 Bacteria 2494
216 Ga0451576_0252064 3300045051 Bacteria 1845
217 Ga0451576_0876246 3300045051 Bacteria 942
218 Ga0466958_0088041 3300045836 Bacteria 1918
219 Ga0466967_0075978 3300045976 Bacteria 3020
220 Ga0466967_0816958 3300045976 Bacteria 926
221 Ga0495592_0007024 3300046454 Bacteria 8418
222 Ga0495638_0121364 3300046460 Bacteria 1544
223 Ga0495653_0094560 3300046463 Bacteria 2177
224 Ga0495608_0061935 3300046511 Bacteria 2459
225 Ga0495628_0017800 3300046516 Bacteria 5900
226 Ga0495628_0125867 3300046516 Bacteria 1963
227 Ga0495632_0059231 3300046519 Bacteria 1864
228 Ga0495637_0012509 3300046520 Bacteria 4057
229 Ga0495644_0058261 3300046523 Bacteria 1452
230 Ga0495652_0034109 3300046529 Bacteria 4437
231 Ga0495652_0122282 3300046529 Bacteria 2073
232 Ga0495597_0000542 3300046542 Bacteria 31279
233 Ga0495645_0000366 3300046543 Bacteria 31440
234 Ga0495645_0023435 3300046543 Bacteria 4470
235 Ga0495645_0206420 3300046543 Bacteria 1329
236 Ga0495661_0007498 3300046665 Bacteria 7608
237 Ga0495657_0034510 3300046675 Bacteria 3513
238 Ga0495599_0001911 3300046678 Bacteria 12058
239 Ga0495599_0010729 3300046678 Bacteria 5611
240 Ga0495646_0031624 3300046680 Bacteria 3297
241 Ga0495658_0086126 3300046683 Bacteria 1853
242 Ga0495624_0030572 3300046690 Bacteria 3507
243 Ga0495670_0028964 3300046691 Bacteria 2747
244 Ga0495600_0022063 3300046809 Bacteria 4085
245 Ga0495604_0064142 3300047317 Bacteria 2800
246 Ga0495636_0034156 3300047318 Bacteria 2092
247 Ga0495676_0050045 3300047321 Bacteria 3354
248 Ga0495687_045386 3300047443 Bacteria 1903
249 Ga0495686_0004536 3300047472 Bacteria 11381
250 Ga0495593_0137068 3300047673 Bacteria 1240
251 Ga0495615_0012798 3300048090 Bacteria 1738
252 Ga0496103_0101879 3300048906 Bacteria 1818
253 Ga0496105_0178869 3300048908 Bacteria 1737
254 Ga0496108_0245913 3300048911 Bacteria 1556
255 Ga0496109_0348259 3300048912 Bacteria 1399
256 Ga0496112_0046123 3300048915 Bacteria 4273
257 Ga0496122_0098743 3300048925 Bacteria 1960
258 Ga0496122_0139654 3300048925 Bacteria 1518
259 Ga0496123_0041299 3300048926 Bacteria 3200
260 Ga0496124_0000007 3300048927 Bacteria 883534
261 Ga0496125_0002451 3300048928 Bacteria 24101
262 Ga0496126_0011130 3300048929 Bacteria 9343
263 Ga0501031_0005150 3300049568 Bacteria 8519
264 Ga0501031_0270665 3300049568 Bacteria 1103
265 Ga0501034_0480507 3300049571 Bacteria 1158
266 Ga0501037_0038148 3300049573 Bacteria 3541
267 Ga0501037_0457503 3300049573 Bacteria 870
268 Ga0501043_0118773 3300049579 Bacteria 2074
269 Ga0501047_0123568 3300049581 Bacteria 2469
270 Ga0501217_109177 3300049661 Bacteria 794
271 Ga0501279_009623 3300049775 Bacteria 1296
272 Ga0501035_0233973 3300049822 Bacteria 1565
273 Ga0501044_0097319 3300049823 Bacteria 2964
274 nmdc:mga00v17_18019_c1 3300050491 Bacteria 4007
275 nmdc:mga00v17_61946_c1 3300050491 Bacteria 2300
276 nmdc:mga00v17_85140_c1 3300050491 Bacteria 1979
277 nmdc:mga0k408_111069_c1 3300050493 Bacteria 1620
278 nmdc:mga0k408_2752_c1 3300050493 Bacteria 9345
279 nmdc:mga09592_127127_c1 3300050508 Bacteria 2191
280 nmdc:mga09592_5011_c1 3300050508 Bacteria 10737
281 nmdc:mga0qj67_153170_c1 3300050509 Bacteria 1870
282 nmdc:mga0qj67_182845_c1 3300050509 Bacteria 1703
283 nmdc:mga06r32_623317_c1 3300050510 Bacteria 1048
284 nmdc:mga0a205_591682_c1 3300050515 Bacteria 963
285 Ga0495601_0014369 3300053077 Bacteria 4769
286 Ga0495601_0024437 3300053077 Bacteria 3721
287 Ga0500578_0057599 3300053086 Bacteria 2484
288 Ga0500595_029792 3300053119 Bacteria 1847
289 Ga0500619_001748 3300053154 Bacteria 3960
290 Ga0500645_034027 3300053730 Bacteria 1522
291 Ga0466962_0041537 3300061719 Bacteria 2200
292 2548499114 2547132374 Bacteria 5530232
293 2643867683 2643221570 Bacteria 5103772
294 2643991545 2643221596 Bacteria 5006805
295 2644062289 2643221609 Bacteria 6756331
296 2644071476 2643221611 Bacteria 6820941
297 2644293278 2643221652 Bacteria 5140275
298 2644648570 2643221717 Bacteria 5676132
299 2739245898 2738543012 Bacteria 7115078
300 2816470594 2816332133 Bacteria 7249298
301 2819542331 2818991436 Bacteria 5376622
302 2839144811 2839138175 Bacteria 6549354
303 2842721592 2842718218 Bacteria 4560148
304 2857543932 2857542790 Bacteria 5326616
305 2894024127 2894023352 Bacteria 5167372
306 2904481612 2904479285 Bacteria 5073931
307 2939634087 2939631187 Bacteria 6118131
308 2974322323 2974320154 Bacteria 4571377
309 2990714009 2990710928 Bacteria 5002431
310 8002392747 8002392321 Bacteria 4159911
311 Ga0075364_10073661
312 JGI25162J39368_1000148
313 JGI25164J39214_1006220
314 JGI25165J46597_1000030
315 Ga0055538_1000017
316 Ga0055539_1000022
317 Ga0055533_1000030
318 Ga0055525_1000034
319 Ga0055541_1000015
320 Ga0070658_10390999
321 Ga0070676_10005197
322 Ga0070670_100111027
323 Ga0068869_100375179
324 Ga0068868_100037290
325 Ga0068868_100056984
326 Ga0068868_100060431
327 Ga0070675_100263298
328 Ga0070675_100415453
329 Ga0070671_100063448
330 Ga0070671_100267672
331 Ga0070671_100308099
332 Ga0070667_100004788
333 Ga0070678_100085179
334 Ga0070678_100344435
335 Ga0068867_100000392
336 Ga0068867_100054454
337 Ga0068853_100042632
338 Ga0068853_100070506
339 Ga0068853_100435721
340 Ga0070672_100291485
341 Ga0070672_100292744
342 Ga0068857_100356491
343 Ga0068856_100042724
344 Ga0068852_100013991
345 Ga0068864_100008061
346 Ga0068863_100178979
347 Ga0075364_10003711
348 Ga0075364_10085680
349 Ga0070716_100026748
350 Ga0075362_10077289
351 Ga0075366_10061639
352 Ga0075366_10088950
353 Ga0075428_100246808
354 Ga0075430_100012873
355 Ga0075430_100153688
356 Ga0075429_100000224
357 Ga0075429_100116850
358 Ga0068865_100151753
359 Ga0075436_100149782
360 Ga0075436_100256150
361 Ga0079104_1000016
362 Ga0099794_10031614
363 Ga0105244_10126565
364 Ga0105240_10042171
365 Ga0105240_10326144
366 Ga0105245_10326834
367 Ga0105243_10015629
368 Ga0105242_10005758
369 Ga0105248_10005965
370 Ga0105237_10018091
371 Ga0105238_10098567
372 Ga0105239_10313821
373 Ga0157378_10142097
374 Ga0157375_10061114
375 Ga0157377_10000034
376 Ga0157376_10033729
377 Ga0182007_10019034
378 Ga0182005_1000142
379 Ga0163161_10281729
380 Ga0213872_10046783
381 Ga0209784_100034
382 Ga0209566_100038
383 Ga0209674_100056
384 Ga0209672_105825
385 Ga0209563_100057
386 Ga0207427_100853
387 Ga0209437_100071
388 Ga0209677_100035
389 Ga0209233_1000094
390 Ga0207696_1002531
391 Ga0207682_10001172
392 Ga0207645_10021350
393 Ga0207707_10088650
394 Ga0207695_10232247
395 Ga0207671_10003773
396 Ga0207644_10076448
397 Ga0207644_10206033
398 Ga0207706_10037247
399 Ga0207686_10031224
400 Ga0207709_10000117
401 Ga0207669_10005731
402 Ga0207704_10378430
403 Ga0207665_10012383
404 Ga0207691_10145753
405 Ga0207691_10262932
406 Ga0207711_10025563
407 Ga0207689_10253297
408 Ga0207689_10262499
409 Ga0207667_10455411
410 Ga0207651_10230332
411 Ga0207677_10016092
412 Ga0207677_10068822
413 Ga0207677_10082035
414 Ga0207639_10145487
415 Ga0207678_10167797
416 Ga0207648_10000106
417 Ga0207648_10047535
418 Ga0207648_10154871
419 Ga0207674_10252116
420 Ga0207683_10217617
421 Ga0207698_10027890
422 Ga0209281_1000017
423 Ga0209974_10026622
424 Ga0268264_10740539
425 Ga0307517_10012331
426 Ga0307515_10000292
427 Ga0307515_10010714
428 Ga0307515_10107356
429 Ga0307515_10183659
430 Ga0265330_10000091
431 Ga0265332_10000028
432 Ga0265325_10009426
433 Ga0265340_10021521
434 Ga0307513_10019952
435 Ga0307509_10001003
436 Ga0307509_10281811
437 Ga0307509_10315770
438 Ga0307408_100000263
439 Ga0307508_10000028
440 Ga0307508_10001377
441 Ga0307514_10000369
442 Ga0316575_10000063
443 Ga0265314_10000054
444 Ga0307516_10002006
445 Ga0307406_10002039
446 Ga0307412_10105259
447 Ga0307412_10290617
448 Ga0307510_10001817
449 Ga0373938_0017278
450 Ga0373932_0039188
451 Ga0373931_0017494
452 Ga0373931_0057703
453 Ga0373937_0030441
454 Ga0395899_0008307
455 Ga0395900_0000482
456 Ga0395898_0007442
457 Ga0395898_0009206
458 Ga0395898_0016477
459 Ga0395898_0030958
460 Ga0395905_0000027
461 Ga0395905_0001600
462 Ga0395905_0004633
463 Ga0395905_0005520
464 Ga0395905_0010741
465 Ga0395905_0038542
466 Ga0395905_0051590
467 Ga0395905_0057161
468 Ga0395905_0205739
469 Ga0395905_0321032
470 Ga0395905_0353100
471 Ga0395905_0386957
472 Ga0395905_0433767
473 Ga0395901_0021285
474 Ga0395901_0038333
475 Ga0395901_0085490
476 Ga0395901_0085902
477 Ga0395901_0205521
478 Ga0395901_0258549
479 Ga0395901_0329826
480 Ga0436365_0020950
481 Ga0436361_1149592
482 Ga0439461_0014587
483 Ga0451853_3891783
484 Ga0450923_031057
485 Ga0450898_007972
486 Ga0439459_0021475
487 Ga0439464_0038990
488 Ga0439460_0113696
489 Ga0451577_0007365
490 Ga0451577_0007943
491 Ga0466969_0000018
492 Ga0466969_0015783
493 Ga0466969_0024502
494 Ga0466969_0045750
495 Ga0466972_0005822
496 Ga0453683_0003537
497 Ga0453683_0008354
498 Ga0466965_0038605
499 Ga0466965_0059282
500 Ga0466966_0001948
501 Ga0466966_0006064
502 Ga0466966_0028624
503 Ga0466966_0058096
504 Ga0466966_0258808
505 Ga0466961_0053828
506 Ga0466961_0055150
507 Ga0466961_0063601
508 Ga0466961_0072968
509 Ga0466963_0021472
510 Ga0466963_0389640
511 Ga0466964_0058546
512 Ga0453684_0027068
513 Ga0453684_0032472
514 Ga0466970_0139695
515 Ga0466970_0153681
516 Ga0466957_0137314
517 Ga0466960_0037789
518 Ga0466960_0112406
519 Ga0466960_0158448
520 Ga0466959_0007310
521 Ga0466959_0056937
522 Ga0466959_0110540
523 Ga0466959_0430524
524 Ga0451576_0096410
525 Ga0451576_0143037
526 Ga0451576_0252064
527 Ga0451576_0876246
528 Ga0466958_0088041
529 Ga0466967_0075978
530 Ga0466967_0816958
531 Ga0495592_0007024
532 Ga0495638_0121364
533 Ga0495653_0094560
534 Ga0495608_0061935
535 Ga0495628_0017800
536 Ga0495628_0125867
537 Ga0495632_0059231
538 Ga0495637_0012509
539 Ga0495644_0058261
540 Ga0495652_0034109
541 Ga0495652_0122282
542 Ga0495597_0000542
543 Ga0495645_0000366
544 Ga0495645_0023435
545 Ga0495645_0206420
546 Ga0495661_0007498
547 Ga0495657_0034510
548 Ga0495599_0001911
549 Ga0495599_0010729
550 Ga0495646_0031624
551 Ga0495658_0086126
552 Ga0495624_0030572
553 Ga0495670_0028964
554 Ga0495600_0022063
555 Ga0495604_0064142
556 Ga0495636_0034156
557 Ga0495676_0050045
558 Ga0495687_045386
559 Ga0495686_0004536
560 Ga0495593_0137068
561 Ga0495615_0012798
562 Ga0496103_0101879
563 Ga0496105_0178869
564 Ga0496108_0245913
565 Ga0496109_0348259
566 Ga0496112_0046123
567 Ga0496122_0098743
568 Ga0496122_0139654
569 Ga0496123_0041299
570 Ga0496124_0000007
571 Ga0496125_0002451
572 Ga0496126_0011130
573 Ga0501031_0005150
574 Ga0501031_0270665
575 Ga0501034_0480507
576 Ga0501037_0038148
577 Ga0501037_0457503
578 Ga0501043_0118773
579 Ga0501047_0123568
580 Ga0501217_109177
581 Ga0501279_009623
582 Ga0501035_0233973
583 Ga0501044_0097319
584 nmdc:mga00v17_18019_c1
585 nmdc:mga00v17_61946_c1
586 nmdc:mga00v17_85140_c1
587 nmdc:mga0k408_111069_c1
588 nmdc:mga0k408_2752_c1
589 nmdc:mga09592_127127_c1
590 nmdc:mga09592_5011_c1
591 nmdc:mga0qj67_153170_c1
592 nmdc:mga0qj67_182845_c1
593 nmdc:mga06r32_623317_c1
594 nmdc:mga0a205_591682_c1
595 Ga0495601_0014369
596 Ga0495601_0024437
597 Ga0500578_0057599
598 Ga0500595_029792
599 Ga0500619_001748
600 Ga0500645_034027
601 Ga0466962_0041537
602 2548499114
603 2643867683
604 2643991545
605 2644062289
606 2644071476
607 2644293278
608 2644648570
609 2739245898
610 2816470594
611 2819542331
612 2839144811
613 2842721592
614 2857543932
615 2894024127
616 2904481612
617 2939634087
618 2974322323
619 2990714009
620 8002392747

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03279

Lip_A_acyltrans

Bacterial lipid A biosynthesis acyltransferase

9

290

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5knk-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii with catalytic residue substitution (e127a) 0.9011 23 272
5f34-assembly1.cif.gz_A crystal structure of membrane associated pata from mycobacterium smegmatis in complex with s-hexadecyl coenzyme a - p21 space group 0.8682 38 261
5kn7-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii 0.831 1 268
5knk-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii with catalytic residue substitution (e127a) 0.7873 23 272
5kn7-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii 0.7757 1 268
ID Description Score Start End Superfamily
af_P31119_15_138_3.40.1010.10 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.6528 92 212 3.40.1010.10
af_O07809_23_150_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.6265 98 212 3.40.50.2000
af_O53516_20_152_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.6212 98 212 3.40.50.2000
af_Q2FXJ7_19_144_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.6147 96 212 3.40.50.2000
af_Q8GXU8_180_307_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.6023 82 212 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A2G8T8C4-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9852 1 283 GO:0005886
GO:0009247
GO:0016746
AF-A0A6L6Q2B0-F1-model_v4 Lysophospholipid acyltransferase family protein 0.9848 1 279 GO:0005886
GO:0009247
GO:0016746
AF-A0A2G8T8C4-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9818 1 283 GO:0005886
GO:0009247
GO:0016746
AF-A0A6L6Q2B0-F1-model_v4 Lysophospholipid acyltransferase family protein 0.9813 1 279 GO:0005886
GO:0009247
GO:0016746
AF-A0A5C9D075-F1-model_v4 Lipid A biosynthesis lauroyl acyltransferase 0.9776 109 271 GO:0005886
GO:0009247
GO:0016746

Map