F399136

General Info

Members Datasets Scaffolds Average Seq Length
307 223 614 300

Family's Representative Sequence

Representative Sequence 3300006195|Ga0075366_10012012|Ga0075366_100120122
Length 343
Sequence MARRERPAFWAMISAPFTATGPAISLFLLKRFATFVATLLAASLVVFAVLDLLPGNAAEVMLGESASREAVAALTHQLGLDRPAWQRYGHWMTGLATLNLGDSYSYNTPIVDLIAERVVVTVPLALIAMAMTTAIALVLGVYAASRHNRLGDVGVMAASQIGIAIPNFWFAILLVLLFAVELQWFSAGGFPGWTEAQGGGLWDGLTALLLPAVSLAVVQSAILARITRSAVLDVLREDFVRTARAKGLGQRAVLWRHVLRNAFVPVLTVMGLQFATLVTGTIVVEQVFSLPGLGRLIFQAISNRDVVLVQNIVMLLAAVVIAINFVVDVLYAVIDPRLKLHAA

Samples

Sample ID Description Type Environment
1 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
69 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
71 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
74 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
76 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
110 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
111 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
112 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
113 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
114 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
115 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
116 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
117 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
118 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
119 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
120 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
121 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
122 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
123 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
124 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
130 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
131 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
132 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
133 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
134 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
135 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
136 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
137 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
138 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
139 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
140 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
141 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
142 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
143 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
144 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
145 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
146 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
147 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
148 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
149 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
150 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
151 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
152 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
153 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
154 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
155 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
156 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
157 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
158 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
159 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
160 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
163 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
164 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
167 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
168 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
169 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
184 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
185 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
186 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
187 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
188 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
189 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
190 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
191 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
192 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
193 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
194 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
195 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
198 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
199 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
200 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
201 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
202 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
203 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
204 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
205 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
206 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
207 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
208 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
209 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
210 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
211 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
212 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
213 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
214 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
215 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
216 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
217 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
218 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
219 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
220 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
221 2878774303 Mesorhizobium sp. M7A.F.Ca.CA.002.15.1.1 Isolate Nodule
222 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
223 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.74
Metatranscriptomes 0
Isolates 3.26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.75
Nodule 0.65
Rhizoplane 1.63
Rhizosphere 75.9
Stem 0
Stem Tuber 0
Unclassified 0.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075366_10012012 3300006195 Bacteria 4905
2 JGI25153J46596_10000010 3300003215 Bacteria 337769
3 JGI25153J46596_10012078 3300003215 Bacteria 3764
4 rootL2_10014686 3300003322 Bacteria 3114
5 rootL2_10134133 3300003322 Bacteria 8321
6 Ga0055526_1002664 3300003771 Bacteria 11917
7 Ga0065165_1004839 3300005262 Bacteria 8007
8 Ga0065707_10090756 3300005295 Bacteria 4073
9 Ga0070658_10082860 3300005327 Bacteria 2636
10 Ga0070676_10039641 3300005328 Bacteria 2725
11 Ga0070683_100035035 3300005329 Bacteria 4588
12 Ga0070680_100134947 3300005336 Bacteria 2067
13 Ga0070682_100078071 3300005337 Bacteria 2135
14 Ga0070660_100068077 3300005339 Bacteria 2774
15 Ga0070661_100005299 3300005344 Bacteria 8891
16 Ga0070668_100118282 3300005347 Bacteria 2115
17 Ga0070668_100129077 3300005347 Bacteria 2027
18 Ga0070674_100094319 3300005356 Bacteria 2167
19 Ga0070673_100051695 3300005364 Bacteria 3220
20 Ga0070667_100179287 3300005367 Bacteria 1873
21 Ga0070709_10342653 3300005434 Bacteria 1102
22 Ga0070714_100076120 3300005435 Bacteria 2913
23 Ga0070713_100032384 3300005436 Bacteria 4175
24 Ga0070713_100164332 3300005436 Bacteria 1984
25 Ga0070711_100058162 3300005439 Bacteria 2679
26 Ga0070700_100171487 3300005441 Bacteria 1503
27 Ga0070708_100118814 3300005445 Bacteria 2436
28 Ga0070662_100314933 3300005457 Bacteria 1275
29 Ga0070681_10084033 3300005458 Bacteria 3136
30 Ga0070699_100023257 3300005518 Bacteria 5338
31 Ga0070679_100151443 3300005530 Bacteria 2296
32 Ga0070684_100017790 3300005535 Bacteria 5841
33 Ga0068853_100129620 3300005539 Bacteria 2257
34 Ga0070672_100199793 3300005543 Bacteria 1672
35 Ga0070672_100280132 3300005543 Bacteria 1409
36 Ga0070665_100059434 3300005548 Bacteria 3832
37 Ga0068855_100025089 3300005563 Bacteria 7137
38 Ga0068855_100049400 3300005563 Bacteria 4962
39 Ga0070664_100004661 3300005564 Bacteria 11007
40 Ga0070664_100242693 3300005564 Bacteria 1617
41 Ga0068857_100006011 3300005577 Bacteria 10366
42 Ga0068854_100002443 3300005578 Bacteria 11494
43 Ga0068856_100002686 3300005614 Bacteria 18230
44 Ga0068852_100055970 3300005616 Bacteria 3406
45 Ga0068852_100118658 3300005616 Bacteria 2418
46 Ga0068866_10028634 3300005718 Bacteria 2656
47 Ga0068861_100000609 3300005719 Bacteria 21192
48 Ga0068863_100336214 3300005841 Bacteria 1468
49 Ga0068858_100035212 3300005842 Bacteria 4643
50 Ga0068860_100000505 3300005843 Bacteria 48380
51 Ga0068860_100214659 3300005843 Bacteria 1867
52 Ga0068862_100011650 3300005844 Bacteria 7255
53 Ga0068862_100073037 3300005844 Bacteria 2965
54 Ga0081455_10125230 3300005937 Bacteria 2018
55 Ga0075363_100182354 3300006048 Bacteria 1195
56 Ga0075366_10019424 3300006195 Bacteria 3931
57 Ga0075366_10054821 3300006195 Bacteria 2368
58 Ga0068865_100000137 3300006881 Bacteria 38361
59 Ga0105240_10007512 3300009093 Bacteria 15818
60 Ga0105240_10009244 3300009093 Bacteria 13982
61 Ga0105240_10021994 3300009093 Bacteria 8471
62 Ga0105247_10022728 3300009101 Bacteria 3776
63 Ga0114129_10093023 3300009147 Bacteria 4177
64 Ga0105243_10051509 3300009148 Bacteria 3256
65 Ga0105243_10083733 3300009148 Bacteria 2610
66 Ga0105243_10214753 3300009148 Bacteria 1696
67 Ga0105241_10029316 3300009174 Bacteria 4105
68 Ga0105237_10000076 3300009545 Bacteria 131773
69 Ga0105237_10025171 3300009545 Bacteria 6088
70 Ga0105238_10002335 3300009551 Bacteria 19082
71 Ga0105238_10002978 3300009551 Bacteria 16913
72 Ga0105238_10026070 3300009551 Bacteria 5957
73 Ga0105249_10172127 3300009553 Bacteria 2101
74 Ga0105239_10001865 3300010375 Bacteria 27579
75 Ga0105239_10053938 3300010375 Bacteria 4409
76 Ga0157373_10012408 3300013100 Bacteria 6265
77 Ga0157373_10128029 3300013100 Bacteria 1785
78 Ga0157371_10040690 3300013102 Bacteria 3318
79 Ga0157371_10131521 3300013102 Bacteria 1781
80 Ga0157370_10013532 3300013104 Bacteria 8400
81 Ga0157370_10018708 3300013104 Bacteria 6965
82 Ga0157369_10038109 3300013105 Bacteria 5258
83 Ga0157378_10027156 3300013297 Bacteria 5051
84 Ga0163162_10001024 3300013306 Bacteria 25970
85 Ga0163162_10736901 3300013306 Bacteria 1105
86 Ga0157372_10006257 3300013307 Bacteria 12662
87 Ga0157372_10030821 3300013307 Bacteria 5868
88 Ga0157380_10114206 3300014326 Bacteria 2275
89 Ga0157379_10101362 3300014968 Bacteria 2584
90 Ga0163161_10144451 3300017792 Bacteria 1804
91 Ga0163161_10192359 3300017792 Bacteria 1569
92 Ga0213874_10002594 3300021377 Bacteria 3911
93 Ga0213876_10006823 3300021384 Bacteria 6231
94 Ga0213875_10002854 3300021388 Bacteria 10121
95 Ga0209566_103881 3300025225 Bacteria 2154
96 Ga0209129_1000035 3300025258 Bacteria 329303
97 Ga0209673_1017254 3300025273 Bacteria 2666
98 Ga0209675_1005495 3300025291 Bacteria 5294
99 Ga0209025_1003611 3300025294 Bacteria 14406
100 Ga0209564_1000024 3300025295 Bacteria 535041
101 Ga0209758_1000033 3300025297 Bacteria 469998
102 Ga0209758_1000558 3300025297 Bacteria 58712
103 Ga0209051_1019331 3300025303 Bacteria 2977
104 Ga0207642_10003038 3300025899 Bacteria 5258
105 Ga0207710_10071948 3300025900 Bacteria 1587
106 Ga0207699_10021146 3300025906 Bacteria 3501
107 Ga0207643_10124427 3300025908 Bacteria 1530
108 Ga0207705_10070714 3300025909 Bacteria 2529
109 Ga0207654_10024700 3300025911 Bacteria 3234
110 Ga0207695_10010511 3300025913 Bacteria 11321
111 Ga0207695_10158336 3300025913 Bacteria 2198
112 Ga0207671_10011009 3300025914 Bacteria 7405
113 Ga0207671_10048803 3300025914 Bacteria 3133
114 Ga0207657_10003223 3300025919 Bacteria 17482
115 Ga0207649_10072288 3300025920 Bacteria 2206
116 Ga0207649_10096018 3300025920 Bacteria 1952
117 Ga0207649_10133634 3300025920 Bacteria 1689
118 Ga0207652_10035918 3300025921 Bacteria 4187
119 Ga0207694_10014006 3300025924 Bacteria 6048
120 Ga0207694_10378311 3300025924 Bacteria 1175
121 Ga0207664_10082243 3300025929 Bacteria 2622
122 Ga0207706_10216310 3300025933 Bacteria 1679
123 Ga0207709_10040260 3300025935 Bacteria 2797
124 Ga0207691_10116692 3300025940 Bacteria 2369
125 Ga0207661_10050061 3300025944 Bacteria 3327
126 Ga0207679_10361943 3300025945 Bacteria 1267
127 Ga0207667_10018417 3300025949 Bacteria 7831
128 Ga0207667_10184707 3300025949 Bacteria 2141
129 Ga0207667_10440349 3300025949 Bacteria 1325
130 Ga0207668_10076522 3300025972 Bacteria 2410
131 Ga0207658_10135429 3300025986 Bacteria 1985
132 Ga0207703_10071762 3300026035 Bacteria 2861
133 Ga0207703_10378674 3300026035 Bacteria 1309
134 Ga0207639_10094727 3300026041 Bacteria 2398
135 Ga0207708_10233481 3300026075 Bacteria 1477
136 Ga0207702_10023607 3300026078 Bacteria 5102
137 Ga0207648_10000435 3300026089 Bacteria 46125
138 Ga0207648_10016859 3300026089 Bacteria 6661
139 Ga0207674_10000014 3300026116 Bacteria 183605
140 Ga0207675_100000369 3300026118 Bacteria 43072
141 Ga0207683_10179332 3300026121 Bacteria 1920
142 Ga0207683_10218235 3300026121 Bacteria 1737
143 Ga0207698_10172906 3300026142 Bacteria 1904
144 Ga0268265_10065622 3300028380 Bacteria 2802
145 Ga0268265_10112647 3300028380 Bacteria 2224
146 Ga0268264_10066991 3300028381 Bacteria 3030
147 Ga0268264_10067829 3300028381 Bacteria 3012
148 Ga0268264_10284625 3300028381 Bacteria 1550
149 Ga0307517_10096968 3300028786 Bacteria 2358
150 Ga0307515_10000013 3300028794 Bacteria 568456
151 Ga0307515_10000037 3300028794 Bacteria 331970
152 Ga0307515_10000123 3300028794 Bacteria 186601
153 Ga0307515_10007984 3300028794 Bacteria 20764
154 Ga0307515_10264038 3300028794 Bacteria 1453
155 Ga0265330_10000046 3300031235 Bacteria 108853
156 Ga0265332_10000028 3300031238 Bacteria 184029
157 Ga0265320_10051234 3300031240 Bacteria 2004
158 Ga0265325_10001397 3300031241 Bacteria 17039
159 Ga0307513_10006025 3300031456 Bacteria 15914
160 Ga0307509_10067177 3300031507 Bacteria 3757
161 Ga0307508_10000003 3300031616 Bacteria 321602
162 Ga0307508_10002534 3300031616 Bacteria 19233
163 Ga0265314_10000054 3300031711 Bacteria 184029
164 Ga0307516_10001867 3300031730 Bacteria 28877
165 Ga0307516_10013339 3300031730 Bacteria 8768
166 Ga0307507_10089225 3300033179 Bacteria 2654
167 Ga0307510_10123852 3300033180 Bacteria 2281
168 Ga0316574_0189891 3300035398 Unclassified 1321
169 Ga0373924_0050259 3300035410 Bacteria 1727
170 Ga0373925_0030604 3300037068 Bacteria 3951
171 Ga0395900_0036136 3300037418 Bacteria 5091
172 Ga0395900_0202819 3300037418 Bacteria 2006
173 Ga0395898_0023156 3300037466 Bacteria 6278
174 Ga0395905_0000212 3300037471 Bacteria 89838
175 Ga0395905_0005819 3300037471 Bacteria 12530
176 Ga0395905_0083056 3300037471 Bacteria 3001
177 Ga0395905_0110143 3300037471 Bacteria 2585
178 Ga0395905_0129381 3300037471 Bacteria 2374
179 Ga0395901_0038490 3300038443 Bacteria 4947
180 Ga0395901_0099233 3300038443 Bacteria 3053
181 Ga0395901_0534372 3300038443 Bacteria 1190
182 Ga0436365_0250167 3300039437 Bacteria 6561
183 Ga0436360_0629464 3300039438 Bacteria 2702
184 Ga0436361_0730730 3300039447 Bacteria 2518
185 Ga0436363_0265265 3300039450 Bacteria 1402
186 Ga0436363_1271176 3300039450 Bacteria 3084
187 Ga0436362_1154171 3300039453 Bacteria 4473
188 Ga0451807_2539323 3300041486 Bacteria 3216
189 Ga0451851_0855256 3300041507 Bacteria 3082
190 Ga0451853_1389880 3300041512 Bacteria 2115
191 Ga0439455_0030947 3300042012 Bacteria 1330
192 Ga0451577_0006556 3300042876 Bacteria 11575
193 Ga0466969_0017993 3300044656 Bacteria 3686
194 Ga0466972_0040081 3300044658 Bacteria 2283
195 Ga0466966_0018603 3300044684 Bacteria 4578
196 Ga0466966_0164185 3300044684 Bacteria 1351
197 Ga0466961_0009868 3300044693 Bacteria 6082
198 Ga0466961_0014170 3300044693 Bacteria 5116
199 Ga0466964_0132433 3300044706 Bacteria 1137
200 Ga0453684_0016842 3300044712 Bacteria 11379
201 Ga0453684_0090699 3300044712 Bacteria 3776
202 Ga0466971_0062971 3300044719 Bacteria 1678
203 Ga0466971_0222283 3300044719 Bacteria 895
204 Ga0466968_0099440 3300044735 Bacteria 1297
205 Ga0466970_0041266 3300044765 Bacteria 2451
206 Ga0466959_0039236 3300045049 Bacteria 3499
207 Ga0466959_0138365 3300045049 Bacteria 1722
208 Ga0451576_0052593 3300045051 Bacteria 4268
209 Ga0466967_0303866 3300045976 Bacteria 1536
210 Ga0495638_0001457 3300046460 Bacteria 21379
211 Ga0495638_0067775 3300046460 Bacteria 2190
212 Ga0495650_0003599 3300046471 Bacteria 11173
213 Ga0495632_0005894 3300046519 Bacteria 7998
214 Ga0495644_0079605 3300046523 Bacteria 1235
215 Ga0495656_0002859 3300046615 Bacteria 5785
216 Ga0495625_0000644 3300046660 Bacteria 50280
217 Ga0495669_0048166 3300046684 Bacteria 1906
218 Ga0495674_0046508 3300047319 Bacteria 3851
219 Ga0496101_0279731 3300048904 Bacteria 1304
220 Ga0496106_0001072 3300048909 Bacteria 20176
221 Ga0496112_0416355 3300048915 Bacteria 1283
222 Ga0496114_0226257 3300048917 Bacteria 1643
223 Ga0496117_0046037 3300048920 Bacteria 3143
224 Ga0496118_0002820 3300048921 Bacteria 22739
225 Ga0496121_0002189 3300048924 Bacteria 30586
226 Ga0496124_0000916 3300048927 Bacteria 47613
227 Ga0496125_0001189 3300048928 Bacteria 39370
228 Ga0496125_0009687 3300048928 Bacteria 9839
229 Ga0496126_0005239 3300048929 Bacteria 14926
230 Ga0501031_0058426 3300049568 Bacteria 2513
231 Ga0501032_0006064 3300049569 Bacteria 8909
232 Ga0501032_0074339 3300049569 Bacteria 2264
233 Ga0501033_0116876 3300049570 Bacteria 1937
234 Ga0501034_0055541 3300049571 Bacteria 3984
235 Ga0501034_0128067 3300049571 Bacteria 2523
236 Ga0501036_0027036 3300049572 Bacteria 4848
237 Ga0501037_0010302 3300049573 Bacteria 6859
238 Ga0501037_0217359 3300049573 Bacteria 1346
239 Ga0501038_0012581 3300049574 Bacteria 7733
240 Ga0501038_0033351 3300049574 Bacteria 4536
241 Ga0501039_0001182 3300049575 Bacteria 19129
242 Ga0501040_0075850 3300049576 Bacteria 2324
243 Ga0501042_0092154 3300049578 Bacteria 2175
244 Ga0501043_0008182 3300049579 Bacteria 8245
245 Ga0501046_0001892 3300049580 Bacteria 19894
246 Ga0501046_0012048 3300049580 Bacteria 7372
247 Ga0501047_0000066 3300049581 Bacteria 132744
248 Ga0501047_0101182 3300049581 Bacteria 2761
249 Ga0501047_0215806 3300049581 Bacteria 1775
250 Ga0501048_0039968 3300049582 Bacteria 3362
251 Ga0501048_0114265 3300049582 Bacteria 1907
252 Ga0501067_0024538 3300049583 Bacteria 3345
253 Ga0501068_0010163 3300049584 Bacteria 5281
254 Ga0501068_0045239 3300049584 Bacteria 2652
255 Ga0501069_0022951 3300049585 Bacteria 3397
256 Ga0501069_0123172 3300049585 Bacteria 1481
257 Ga0501070_0022624 3300049586 Bacteria 5263
258 Ga0501070_0089698 3300049586 Bacteria 2544
259 Ga0501070_0307651 3300049586 Bacteria 1290
260 Ga0501071_0037519 3300049587 Bacteria 3461
261 Ga0501072_0054681 3300049588 Bacteria 3146
262 Ga0501072_0119750 3300049588 Bacteria 2097
263 Ga0501073_0002041 3300049589 Bacteria 15077
264 Ga0501073_0011386 3300049589 Bacteria 6508
265 Ga0501073_0082164 3300049589 Bacteria 2241
266 Ga0501074_0015505 3300049590 Bacteria 5539
267 Ga0501079_0056001 3300049741 Bacteria 3043
268 Ga0501079_0258734 3300049741 Bacteria 1360
269 Ga0501080_0010404 3300049742 Bacteria 8514
270 Ga0501080_0032107 3300049742 Bacteria 4895
271 Ga0501080_0054910 3300049742 Bacteria 3709
272 Ga0501083_0004635 3300049744 Bacteria 9707
273 Ga0501083_0019415 3300049744 Bacteria 4736
274 Ga0501266_001695 3300049763 Bacteria 2803
275 Ga0501035_0003143 3300049822 Bacteria 15862
276 Ga0501044_0020879 3300049823 Bacteria 6991
277 Ga0501044_0090655 3300049823 Bacteria 3084
278 Ga0501045_0081736 3300049824 Bacteria 2382
279 nmdc:mga0k408_23266_c1 3300050493 Bacteria 3494
280 nmdc:mga0k408_40267_c2 3300050493 Bacteria 2435
281 nmdc:mga0k408_91304_c1 3300050493 Bacteria 1789
282 nmdc:mga05p37_135629_c1 3300050507 Bacteria 3018
283 Ga0500578_0000057 3300053086 Bacteria 120178
284 Ga0500646_0052689 3300053090 Bacteria 1178
285 Ga0500651_0004099 3300053093 Bacteria 8115
286 Ga0500651_0039580 3300053093 Bacteria 2968
287 Ga0500595_001729 3300053119 Bacteria 11391
288 Ga0500652_003984 3300053131 Bacteria 4517
289 Ga0500658_0027308 3300053134 Bacteria 2206
290 Ga0500559_0006805 3300053136 Bacteria 5128
291 Ga0500568_0010782 3300053139 Bacteria 4263
292 Ga0500577_0056843 3300053142 Bacteria 1491
293 Ga0500588_0007536 3300053146 Bacteria 2512
294 Ga0500622_0000390 3300053156 Bacteria 42468
295 Ga0500596_005248 3300053735 Bacteria 2304
296 Ga0501082_0005528 3300060353 Bacteria 10969
297 Ga0466962_0049064 3300061719 Bacteria 2017
298 2587726068 2585428057 Bacteria 6737412
299 2587735798 2585428058 Bacteria 6853932
300 2587758136 2585428062 Bacteria 6842168
301 2588290395 2588253510 Bacteria 6901809
302 2643967704 2643221592 Bacteria 6608788
303 2644140526 2643221625 Bacteria 6512927
304 2644273493 2643221648 Bacteria 6521465
305 2878780373 2878774303 Bacteria 6108671
306 2894024389 2894023352 Bacteria 5167372
307 3000020286 3000017691 Bacteria 3772574
308 Ga0075366_10012012
309 JGI25153J46596_10000010
310 JGI25153J46596_10012078
311 rootL2_10014686
312 rootL2_10134133
313 Ga0055526_1002664
314 Ga0065165_1004839
315 Ga0065707_10090756
316 Ga0070658_10082860
317 Ga0070676_10039641
318 Ga0070683_100035035
319 Ga0070680_100134947
320 Ga0070682_100078071
321 Ga0070660_100068077
322 Ga0070661_100005299
323 Ga0070668_100118282
324 Ga0070668_100129077
325 Ga0070674_100094319
326 Ga0070673_100051695
327 Ga0070667_100179287
328 Ga0070709_10342653
329 Ga0070714_100076120
330 Ga0070713_100032384
331 Ga0070713_100164332
332 Ga0070711_100058162
333 Ga0070700_100171487
334 Ga0070708_100118814
335 Ga0070662_100314933
336 Ga0070681_10084033
337 Ga0070699_100023257
338 Ga0070679_100151443
339 Ga0070684_100017790
340 Ga0068853_100129620
341 Ga0070672_100199793
342 Ga0070672_100280132
343 Ga0070665_100059434
344 Ga0068855_100025089
345 Ga0068855_100049400
346 Ga0070664_100004661
347 Ga0070664_100242693
348 Ga0068857_100006011
349 Ga0068854_100002443
350 Ga0068856_100002686
351 Ga0068852_100055970
352 Ga0068852_100118658
353 Ga0068866_10028634
354 Ga0068861_100000609
355 Ga0068863_100336214
356 Ga0068858_100035212
357 Ga0068860_100000505
358 Ga0068860_100214659
359 Ga0068862_100011650
360 Ga0068862_100073037
361 Ga0081455_10125230
362 Ga0075363_100182354
363 Ga0075366_10019424
364 Ga0075366_10054821
365 Ga0068865_100000137
366 Ga0105240_10007512
367 Ga0105240_10009244
368 Ga0105240_10021994
369 Ga0105247_10022728
370 Ga0114129_10093023
371 Ga0105243_10051509
372 Ga0105243_10083733
373 Ga0105243_10214753
374 Ga0105241_10029316
375 Ga0105237_10000076
376 Ga0105237_10025171
377 Ga0105238_10002335
378 Ga0105238_10002978
379 Ga0105238_10026070
380 Ga0105249_10172127
381 Ga0105239_10001865
382 Ga0105239_10053938
383 Ga0157373_10012408
384 Ga0157373_10128029
385 Ga0157371_10040690
386 Ga0157371_10131521
387 Ga0157370_10013532
388 Ga0157370_10018708
389 Ga0157369_10038109
390 Ga0157378_10027156
391 Ga0163162_10001024
392 Ga0163162_10736901
393 Ga0157372_10006257
394 Ga0157372_10030821
395 Ga0157380_10114206
396 Ga0157379_10101362
397 Ga0163161_10144451
398 Ga0163161_10192359
399 Ga0213874_10002594
400 Ga0213876_10006823
401 Ga0213875_10002854
402 Ga0209566_103881
403 Ga0209129_1000035
404 Ga0209673_1017254
405 Ga0209675_1005495
406 Ga0209025_1003611
407 Ga0209564_1000024
408 Ga0209758_1000033
409 Ga0209758_1000558
410 Ga0209051_1019331
411 Ga0207642_10003038
412 Ga0207710_10071948
413 Ga0207699_10021146
414 Ga0207643_10124427
415 Ga0207705_10070714
416 Ga0207654_10024700
417 Ga0207695_10010511
418 Ga0207695_10158336
419 Ga0207671_10011009
420 Ga0207671_10048803
421 Ga0207657_10003223
422 Ga0207649_10072288
423 Ga0207649_10096018
424 Ga0207649_10133634
425 Ga0207652_10035918
426 Ga0207694_10014006
427 Ga0207694_10378311
428 Ga0207664_10082243
429 Ga0207706_10216310
430 Ga0207709_10040260
431 Ga0207691_10116692
432 Ga0207661_10050061
433 Ga0207679_10361943
434 Ga0207667_10018417
435 Ga0207667_10184707
436 Ga0207667_10440349
437 Ga0207668_10076522
438 Ga0207658_10135429
439 Ga0207703_10071762
440 Ga0207703_10378674
441 Ga0207639_10094727
442 Ga0207708_10233481
443 Ga0207702_10023607
444 Ga0207648_10000435
445 Ga0207648_10016859
446 Ga0207674_10000014
447 Ga0207675_100000369
448 Ga0207683_10179332
449 Ga0207683_10218235
450 Ga0207698_10172906
451 Ga0268265_10065622
452 Ga0268265_10112647
453 Ga0268264_10066991
454 Ga0268264_10067829
455 Ga0268264_10284625
456 Ga0307517_10096968
457 Ga0307515_10000013
458 Ga0307515_10000037
459 Ga0307515_10000123
460 Ga0307515_10007984
461 Ga0307515_10264038
462 Ga0265330_10000046
463 Ga0265332_10000028
464 Ga0265320_10051234
465 Ga0265325_10001397
466 Ga0307513_10006025
467 Ga0307509_10067177
468 Ga0307508_10000003
469 Ga0307508_10002534
470 Ga0265314_10000054
471 Ga0307516_10001867
472 Ga0307516_10013339
473 Ga0307507_10089225
474 Ga0307510_10123852
475 Ga0316574_0189891
476 Ga0373924_0050259
477 Ga0373925_0030604
478 Ga0395900_0036136
479 Ga0395900_0202819
480 Ga0395898_0023156
481 Ga0395905_0000212
482 Ga0395905_0005819
483 Ga0395905_0083056
484 Ga0395905_0110143
485 Ga0395905_0129381
486 Ga0395901_0038490
487 Ga0395901_0099233
488 Ga0395901_0534372
489 Ga0436365_0250167
490 Ga0436360_0629464
491 Ga0436361_0730730
492 Ga0436363_0265265
493 Ga0436363_1271176
494 Ga0436362_1154171
495 Ga0451807_2539323
496 Ga0451851_0855256
497 Ga0451853_1389880
498 Ga0439455_0030947
499 Ga0451577_0006556
500 Ga0466969_0017993
501 Ga0466972_0040081
502 Ga0466966_0018603
503 Ga0466966_0164185
504 Ga0466961_0009868
505 Ga0466961_0014170
506 Ga0466964_0132433
507 Ga0453684_0016842
508 Ga0453684_0090699
509 Ga0466971_0062971
510 Ga0466971_0222283
511 Ga0466968_0099440
512 Ga0466970_0041266
513 Ga0466959_0039236
514 Ga0466959_0138365
515 Ga0451576_0052593
516 Ga0466967_0303866
517 Ga0495638_0001457
518 Ga0495638_0067775
519 Ga0495650_0003599
520 Ga0495632_0005894
521 Ga0495644_0079605
522 Ga0495656_0002859
523 Ga0495625_0000644
524 Ga0495669_0048166
525 Ga0495674_0046508
526 Ga0496101_0279731
527 Ga0496106_0001072
528 Ga0496112_0416355
529 Ga0496114_0226257
530 Ga0496117_0046037
531 Ga0496118_0002820
532 Ga0496121_0002189
533 Ga0496124_0000916
534 Ga0496125_0001189
535 Ga0496125_0009687
536 Ga0496126_0005239
537 Ga0501031_0058426
538 Ga0501032_0006064
539 Ga0501032_0074339
540 Ga0501033_0116876
541 Ga0501034_0055541
542 Ga0501034_0128067
543 Ga0501036_0027036
544 Ga0501037_0010302
545 Ga0501037_0217359
546 Ga0501038_0012581
547 Ga0501038_0033351
548 Ga0501039_0001182
549 Ga0501040_0075850
550 Ga0501042_0092154
551 Ga0501043_0008182
552 Ga0501046_0001892
553 Ga0501046_0012048
554 Ga0501047_0000066
555 Ga0501047_0101182
556 Ga0501047_0215806
557 Ga0501048_0039968
558 Ga0501048_0114265
559 Ga0501067_0024538
560 Ga0501068_0010163
561 Ga0501068_0045239
562 Ga0501069_0022951
563 Ga0501069_0123172
564 Ga0501070_0022624
565 Ga0501070_0089698
566 Ga0501070_0307651
567 Ga0501071_0037519
568 Ga0501072_0054681
569 Ga0501072_0119750
570 Ga0501073_0002041
571 Ga0501073_0011386
572 Ga0501073_0082164
573 Ga0501074_0015505
574 Ga0501079_0056001
575 Ga0501079_0258734
576 Ga0501080_0010404
577 Ga0501080_0032107
578 Ga0501080_0054910
579 Ga0501083_0004635
580 Ga0501083_0019415
581 Ga0501266_001695
582 Ga0501035_0003143
583 Ga0501044_0020879
584 Ga0501044_0090655
585 Ga0501045_0081736
586 nmdc:mga0k408_23266_c1
587 nmdc:mga0k408_40267_c2
588 nmdc:mga0k408_91304_c1
589 nmdc:mga05p37_135629_c1
590 Ga0500578_0000057
591 Ga0500646_0052689
592 Ga0500651_0004099
593 Ga0500651_0039580
594 Ga0500595_001729
595 Ga0500652_003984
596 Ga0500658_0027308
597 Ga0500559_0006805
598 Ga0500568_0010782
599 Ga0500577_0056843
600 Ga0500588_0007536
601 Ga0500622_0000390
602 Ga0500596_005248
603 Ga0501082_0005528
604 Ga0466962_0049064
605 2587726068
606 2587735798
607 2587758136
608 2588290395
609 2643967704
610 2644140526
611 2644273493
612 2878780373
613 2894024389
614 3000020286

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

136

340

0.99

PF19300

BPD_transp_1_N

Binding-prot-dependent transport system membrane comp, N-term

24

125

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ymu-assembly1.cif.gz_C crystal structure of an amino acid abc transporter complex with arginines and atps 0.735 91 313
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.7046 89 310
4ymu-assembly1.cif.gz_C crystal structure of an amino acid abc transporter complex with arginines and atps 0.6967 91 313
8ja7-assembly1.cif.gz_A cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.6925 92 311
3dhw-assembly2.cif.gz_E crystal structure of methionine importer metni 0.6854 92 302
ID Description Score Start End Superfamily
af_P33591_90_303_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9523 91 310 1.10.3720.10
af_Q2FYQ5_85_305_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.952 88 312 1.10.3720.10
af_Q2FZR7_83_297_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9448 88 308 1.10.3720.10
af_P33591_90_303_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9394 91 310 1.10.3720.10
af_I6YGV9_86_302_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9393 88 310 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A431Q4N2-F1-model_v4 ABC transporter permease 0.9714 87 312 GO:0005886
GO:0055085
AF-A0A529HUQ5-F1-model_v4 ABC transporter permease 0.964 73 295 GO:0005886
GO:0055085
AF-A0A6A7SEL2-F1-model_v4 Glutathione transport system permease protein GsiC 0.9607 4 312 GO:0005886
GO:0055085
AF-A0A7R7T3T1-F1-model_v4 ABC transporter permease 0.9592 4 317 GO:0005886
GO:0071916
AF-A0A847Y2J3-F1-model_v4 ABC transporter permease 0.9584 4 313 GO:0005886
GO:0055085

Map