F398259

General Info

Members Datasets Scaffolds Average Seq Length
305 192 610 232

Family's Representative Sequence

Representative Sequence 3300044842|Ga0466957_0401691|Ga0466957_0401691_91_837
Length 248
Sequence MLGARGTGWFCLALEYKMLNEHKAVVLLSGGLDSTTVLAIAKEQGYQLYAMSFRYGQRHVIELTSAQRVASAMGVRKHVIVDINLRQFGGSALTDDISVPKGRDVHAMSEGIPVTYVPARNTVFLSFALAWAETLGSQDIFIGVNALDYSGYPDCRPQYIEAYENMANLATRAGVEGTQRLKIHTPLIHLTKAEIIRKGLALGVNYGLTSSCYDPGPDGRPCGECDSCILRAKGFAEAGATDPLIAPI

Samples

Sample ID Description Type Environment
1 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
49 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
85 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
90 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
91 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
92 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
93 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
94 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
95 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
99 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
102 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
103 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
104 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
105 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
113 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
114 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
118 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
121 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
122 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
123 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
126 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
133 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
136 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
139 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
140 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
141 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
144 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
160 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
161 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
166 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
167 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
168 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
180 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
181 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
182 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
183 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
184 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
185 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
186 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
187 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
188 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
189 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
190 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
191 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
192 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.72
Metatranscriptomes 0.98
Isolates 2.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.64
Nodule 0.98
Rhizoplane 2.95
Rhizosphere 84.26
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466957_0401691 3300044842 Bacteria 937
2 LJQas_1000003 3300000549 Bacteria 39479
3 JGI25406J46586_10022674 3300003203 Bacteria 2496
4 rootL2_10027059 3300003322 Bacteria 5673
5 Ga0065704_10208460 3300005289 Bacteria 1115
6 Ga0065712_10072223 3300005290 Bacteria 4851
7 Ga0070683_100096723 3300005329 Bacteria 2777
8 Ga0070690_100062936 3300005330 Bacteria 2393
9 Ga0070666_10064006 3300005335 Bacteria 2494
10 Ga0070680_100234163 3300005336 Bacteria 1551
11 Ga0070691_10309747 3300005341 Bacteria 865
12 Ga0070671_100243287 3300005355 Bacteria 1528
13 Ga0070674_100571616 3300005356 Bacteria 951
14 Ga0070667_100002366 3300005367 Bacteria 16513
15 Ga0070703_10000069 3300005406 Bacteria 52235
16 Ga0070703_10002009 3300005406 Bacteria 5949
17 Ga0070709_10003232 3300005434 Bacteria 8745
18 Ga0070713_100421959 3300005436 Bacteria 1249
19 Ga0070711_100000098 3300005439 Bacteria 46357
20 Ga0070705_100000012 3300005440 Bacteria 101160
21 Ga0070694_100003833 3300005444 Bacteria 8982
22 Ga0070708_100089303 3300005445 Bacteria 2804
23 Ga0070708_100194060 3300005445 Bacteria 1900
24 Ga0070708_100469282 3300005445 Bacteria 1187
25 Ga0070708_100666914 3300005445 Bacteria 979
26 Ga0070663_100223674 3300005455 Bacteria 1479
27 Ga0070663_100715387 3300005455 Bacteria 852
28 Ga0070681_10022788 3300005458 Bacteria 6294
29 Ga0070706_100002151 3300005467 Bacteria 20076
30 Ga0070706_100070213 3300005467 Bacteria 3239
31 Ga0070706_100186471 3300005467 Bacteria 1938
32 Ga0070699_100001417 3300005518 Bacteria 22018
33 Ga0070699_100166344 3300005518 Bacteria 1953
34 Ga0070697_100013511 3300005536 Bacteria 6405
35 Ga0070697_100026683 3300005536 Bacteria 4618
36 Ga0070697_100137404 3300005536 Bacteria 2053
37 Ga0068853_100109730 3300005539 Bacteria 2449
38 Ga0070695_100151428 3300005545 Bacteria 1619
39 Ga0070695_100248948 3300005545 Bacteria 1292
40 Ga0070695_100457760 3300005545 Bacteria 979
41 Ga0070696_100000901 3300005546 Bacteria 19290
42 Ga0070665_100017884 3300005548 Bacteria 7117
43 Ga0070665_100019860 3300005548 Bacteria 6747
44 Ga0070665_100084965 3300005548 Bacteria 3170
45 Ga0070665_100159171 3300005548 Bacteria 2260
46 Ga0070704_100067287 3300005549 Bacteria 2586
47 Ga0068856_100526260 3300005614 Bacteria 1203
48 Ga0068852_100073398 3300005616 Bacteria 3010
49 Ga0068851_10328905 3300005834 Bacteria 885
50 Ga0068863_100090981 3300005841 Bacteria 2893
51 Ga0068860_100004430 3300005843 Bacteria 14338
52 Ga0068862_100018226 3300005844 Bacteria 5845
53 Ga0081539_10000951 3300005985 Bacteria 54311
54 Ga0070717_10300830 3300006028 Bacteria 1426
55 Ga0075428_100226718 3300006844 Bacteria 2017
56 Ga0075430_100000270 3300006846 Bacteria 36699
57 Ga0075430_100031513 3300006846 Bacteria 4501
58 Ga0075430_100040118 3300006846 Bacteria 3963
59 Ga0075431_100000092 3300006847 Bacteria 55387
60 Ga0075431_100001948 3300006847 Bacteria 19700
61 Ga0075433_10202219 3300006852 Bacteria 1766
62 Ga0075433_10308711 3300006852 Bacteria 1400
63 Ga0075434_100061829 3300006871 Bacteria 3726
64 Ga0075434_100314803 3300006871 Bacteria 1586
65 Ga0075429_100000123 3300006880 Bacteria 45462
66 Ga0075429_100003363 3300006880 Bacteria 13630
67 Ga0075429_100094050 3300006880 Bacteria 2614
68 Ga0079104_1007391 3300006946 Bacteria 3994
69 Ga0079104_1020957 3300006946 Bacteria 1789
70 Ga0075435_100010165 3300007076 Bacteria 6872
71 Ga0075435_100177925 3300007076 Bacteria 1797
72 Ga0075435_100476678 3300007076 Bacteria 1077
73 Ga0075435_100777087 3300007076 Bacteria 833
74 Ga0099794_10007900 3300007265 Bacteria 4396
75 Ga0099794_10171641 3300007265 Bacteria 1105
76 Ga0099795_10116087 3300007788 Bacteria 1066
77 Ga0105240_10396433 3300009093 Bacteria 1556
78 Ga0111539_10742488 3300009094 Bacteria 1142
79 Ga0114129_10017876 3300009147 Bacteria 10096
80 Ga0114129_10052863 3300009147 Bacteria 5700
81 Ga0114129_10156707 3300009147 Bacteria 3113
82 Ga0114129_10167748 3300009147 Bacteria 2995
83 Ga0114129_10318509 3300009147 Bacteria 2068
84 Ga0114129_10357025 3300009147 Bacteria 1935
85 Ga0114129_10390852 3300009147 Bacteria 1835
86 Ga0105248_10245879 3300009177 Bacteria 2014
87 Ga0105237_10252844 3300009545 Bacteria 1764
88 Ga0105238_10149106 3300009551 Bacteria 2315
89 Ga0105238_10535047 3300009551 Bacteria 1175
90 Ga0105249_10041840 3300009553 Bacteria 4166
91 Ga0105239_10002366 3300010375 Bacteria 24043
92 Ga0105239_10029595 3300010375 Bacteria 6022
93 Ga0171462_1005 3300013250 Bacteria 598379
94 Ga0157374_10311731 3300013296 Bacteria 1558
95 Ga0157378_10521901 3300013297 Bacteria 1189
96 Ga0163162_10176046 3300013306 Bacteria 2265
97 Ga0157375_10821356 3300013308 Bacteria 1077
98 Ga0163163_10009584 3300014325 Bacteria 8655
99 Ga0207653_10000137 3300025885 Bacteria 52413
100 Ga0207653_10002549 3300025885 Bacteria 5789
101 Ga0207680_10144629 3300025903 Bacteria 1579
102 Ga0207699_10008181 3300025906 Bacteria 5150
103 Ga0207684_10002174 3300025910 Bacteria 20062
104 Ga0207684_10034911 3300025910 Bacteria 4271
105 Ga0207707_10016952 3300025912 Bacteria 6347
106 Ga0207695_10315589 3300025913 Bacteria 1453
107 Ga0207663_10000080 3300025916 Bacteria 46340
108 Ga0207646_10010144 3300025922 Bacteria 9230
109 Ga0207646_10366161 3300025922 Bacteria 1302
110 Ga0207681_10035991 3300025923 Bacteria 3264
111 Ga0207694_10433146 3300025924 Bacteria 1096
112 Ga0207694_10515957 3300025924 Bacteria 1001
113 Ga0207659_10765231 3300025926 Bacteria 829
114 Ga0207664_10301956 3300025929 Bacteria 1409
115 Ga0207670_10449656 3300025936 Bacteria 1038
116 Ga0207711_10377666 3300025941 Bacteria 1315
117 Ga0207711_10642372 3300025941 Bacteria 990
118 Ga0207712_10142707 3300025961 Bacteria 1840
119 Ga0207712_10596681 3300025961 Bacteria 955
120 Ga0207668_10604743 3300025972 Bacteria 955
121 Ga0207703_10000284 3300026035 Bacteria 56248
122 Ga0207639_10350447 3300026041 Bacteria 1318
123 Ga0207678_10096812 3300026067 Bacteria 2522
124 Ga0207678_10165180 3300026067 Bacteria 1890
125 Ga0207641_10000470 3300026088 Bacteria 45563
126 Ga0207641_10022673 3300026088 Bacteria 5168
127 Ga0207641_10538058 3300026088 Bacteria 1138
128 Ga0209281_1016553 3300027111 Bacteria 1513
129 Ga0209971_1020855 3300027682 Bacteria 1559
130 Ga0268266_10008978 3300028379 Bacteria 8848
131 Ga0268266_10013961 3300028379 Bacteria 6916
132 Ga0268266_10175661 3300028379 Bacteria 1947
133 Ga0268266_10202003 3300028379 Bacteria 1819
134 Ga0268265_10012285 3300028380 Bacteria 5804
135 Ga0268264_10000708 3300028381 Bacteria 38439
136 Ga0307515_10343573 3300028794 Bacteria 1143
137 Ga0307511_10053551 3300030521 Bacteria 3196
138 Ga0316579_10241491 3300031691 Bacteria 874
139 Ga0316576_10004941 3300031727 Bacteria 8071
140 Ga0316576_10009287 3300031727 Bacteria 6339
141 Ga0316576_10378876 3300031727 Bacteria 1050
142 Ga0316578_10000965 3300031728 Bacteria 10917
143 Ga0316577_10029659 3300031733 Bacteria 3052
144 Ga0316577_10052636 3300031733 Bacteria 2272
145 Ga0307413_10249377 3300031824 Bacteria 1316
146 Ga0307409_100070860 3300031995 Bacteria 2769
147 Ga0307416_100694812 3300032002 Bacteria 1106
148 Ga0307416_100984043 3300032002 Bacteria 946
149 Ga0316585_10124606 3300032137 Bacteria 848
150 Ga0316593_10030286 3300032168 Bacteria 1756
151 Ga0307510_10000018 3300033180 Bacteria 192986
152 Ga0307510_10031234 3300033180 Bacteria 6022
153 Ga0316586_1008563 3300033527 Bacteria 1519
154 Ga0316588_1018698 3300033528 Bacteria 1554
155 Ga0373926_0291496 3300035083 Bacteria 636
156 Ga0373936_0005721 3300035113 Bacteria 4691
157 Ga0373936_0051615 3300035113 Bacteria 1664
158 Ga0373954_0066093 3300035118 Bacteria 1712
159 Ga0373937_0054646 3300036401 Bacteria 3665
160 Ga0316582_0367231 3300036647 Bacteria 990
161 Ga0395901_0138892 3300038443 Bacteria 2554
162 Ga0400483_101148 3300039062 Bacteria 1417
163 Ga0436365_1876799 3300039437 Bacteria 3966
164 Ga0451577_0000110 3300042876 Bacteria 181039
165 Ga0453683_0019548 3300044673 Bacteria 4337
166 Ga0453683_0024257 3300044673 Bacteria 3861
167 Ga0453683_0188368 3300044673 Bacteria 1309
168 Ga0466961_0112062 3300044693 Bacteria 1716
169 Ga0453684_0000027 3300044712 Bacteria 778857
170 Ga0453684_0000152 3300044712 Bacteria 305949
171 Ga0466957_0187235 3300044842 Bacteria 1354
172 Ga0466957_0340212 3300044842 Bacteria 1016
173 Ga0466959_0028122 3300045049 Bacteria 4170
174 Ga0451576_0093871 3300045051 Bacteria 3119
175 Ga0495641_0130243 3300046461 Bacteria 1123
176 Ga0495596_0002646 3300046500 Bacteria 9477
177 Ga0495606_0010947 3300046507 Bacteria 7458
178 Ga0495611_0246597 3300046648 Bacteria 828
179 Ga0495599_0397872 3300046678 Bacteria 821
180 Ga0495670_0053080 3300046691 Bacteria 2030
181 Ga0495687_083751 3300047443 Bacteria 1241
182 Ga0495687_146499 3300047443 Bacteria 813
183 Ga0495686_0434093 3300047472 Bacteria 700
184 Ga0495626_0000459 3300048091 Bacteria 41540
185 Ga0496101_0015997 3300048904 Bacteria 5063
186 Ga0496101_0067051 3300048904 Bacteria 2619
187 Ga0496102_0011734 3300048905 Bacteria 7562
188 Ga0496102_0024383 3300048905 Bacteria 5378
189 Ga0496102_0108155 3300048905 Bacteria 2590
190 Ga0496104_0384512 3300048907 Bacteria 1316
191 Ga0496105_0002057 3300048908 Bacteria 14541
192 Ga0496113_0001181 3300048916 Bacteria 14270
193 Ga0496114_0234488 3300048917 Bacteria 1613
194 Ga0496116_0000045 3300048919 Bacteria 324307
195 Ga0496116_0009505 3300048919 Bacteria 8279
196 Ga0496117_0001025 3300048920 Bacteria 42677
197 Ga0496118_0000419 3300048921 Bacteria 70630
198 Ga0496118_0027047 3300048921 Bacteria 4865
199 Ga0496119_0010201 3300048922 Bacteria 7929
200 Ga0496120_0000014 3300048923 Bacteria 323163
201 Ga0496121_0005907 3300048924 Bacteria 15492
202 Ga0496121_0034386 3300048924 Bacteria 4562
203 Ga0496122_0010475 3300048925 Bacteria 9547
204 Ga0496123_0002684 3300048926 Bacteria 21413
205 Ga0496124_0029446 3300048927 Bacteria 4892
206 Ga0496124_0033030 3300048927 Bacteria 4558
207 Ga0496124_0035436 3300048927 Bacteria 4366
208 Ga0496125_0008726 3300048928 Bacteria 10547
209 Ga0496125_0008859 3300048928 Bacteria 10457
210 Ga0496126_0000568 3300048929 Bacteria 70707
211 Ga0496126_0042371 3300048929 Bacteria 4205
212 Ga0495682_0084120 3300049460 Bacteria 1144
213 Ga0501031_0132057 3300049568 Bacteria 1631
214 Ga0501032_0003270 3300049569 Bacteria 12476
215 Ga0501032_0016916 3300049569 Bacteria 5126
216 Ga0501032_0022815 3300049569 Bacteria 4334
217 Ga0501033_0050215 3300049570 Bacteria 3095
218 Ga0501034_0039333 3300049571 Bacteria 4790
219 Ga0501034_0045021 3300049571 Bacteria 4460
220 Ga0501034_0154913 3300049571 Bacteria 2266
221 Ga0501036_0011057 3300049572 Bacteria 7463
222 Ga0501036_0046373 3300049572 Bacteria 3680
223 Ga0501036_0142204 3300049572 Bacteria 2024
224 Ga0501037_0028937 3300049573 Bacteria 4092
225 Ga0501038_0026454 3300049574 Bacteria 5167
226 Ga0501038_0242209 3300049574 Bacteria 1431
227 Ga0501039_0007193 3300049575 Bacteria 8480
228 Ga0501039_0034940 3300049575 Bacteria 3879
229 Ga0501040_0005328 3300049576 Bacteria 8319
230 Ga0501040_0586849 3300049576 Bacteria 805
231 Ga0501041_0238360 3300049577 Bacteria 1143
232 Ga0501042_0039838 3300049578 Bacteria 3341
233 Ga0501043_0003776 3300049579 Bacteria 12447
234 Ga0501043_0049835 3300049579 Bacteria 3292
235 Ga0501043_0225521 3300049579 Bacteria 1448
236 Ga0501043_0476918 3300049579 Bacteria 935
237 Ga0501046_0005320 3300049580 Bacteria 11510
238 Ga0501046_0011536 3300049580 Bacteria 7556
239 Ga0501046_0078111 3300049580 Bacteria 2561
240 Ga0501046_0322253 3300049580 Bacteria 1126
241 Ga0501047_0001473 3300049581 Bacteria 22948
242 Ga0501047_0041824 3300049581 Bacteria 4427
243 Ga0501047_0071863 3300049581 Bacteria 3330
244 Ga0501048_0001983 3300049582 Bacteria 15559
245 Ga0501048_0064134 3300049582 Bacteria 2598
246 Ga0501067_0047524 3300049583 Bacteria 2380
247 Ga0501067_0067097 3300049583 Bacteria 1986
248 Ga0501068_0048244 3300049584 Bacteria 2570
249 Ga0501068_0182547 3300049584 Bacteria 1327
250 Ga0501069_0042503 3300049585 Bacteria 2514
251 Ga0501069_0079180 3300049585 Bacteria 1849
252 Ga0501072_0063755 3300049588 Bacteria 2907
253 Ga0501073_0019716 3300049589 Bacteria 4867
254 Ga0501073_0022011 3300049589 Bacteria 4594
255 Ga0501073_0061871 3300049589 Bacteria 2611
256 Ga0501073_0274388 3300049589 Bacteria 1164
257 Ga0501074_0383430 3300049590 Bacteria 997
258 Ga0501077_0044577 3300049593 Bacteria 2817
259 Ga0501077_0444532 3300049593 Bacteria 830
260 Ga0501079_0152998 3300049741 Bacteria 1798
261 Ga0501080_0023406 3300049742 Bacteria 5725
262 Ga0501080_0095686 3300049742 Bacteria 2757
263 Ga0501080_0587520 3300049742 Bacteria 989
264 Ga0501083_0012875 3300049744 Bacteria 5850
265 Ga0501035_0161719 3300049822 Bacteria 1937
266 Ga0501044_0023129 3300049823 Bacteria 6615
267 Ga0501044_0811163 3300049823 Bacteria 814
268 nmdc:mga05p37_147118_c1 3300050507 Bacteria 2883
269 nmdc:mga05p37_162125_c1 3300050507 Bacteria 2730
270 nmdc:mga05p37_632673_c1 3300050507 Bacteria 1202
271 nmdc:mga09592_137786_c1 3300050508 Bacteria 2103
272 nmdc:mga09592_16194_c1 3300050508 Bacteria 6094
273 nmdc:mga09592_2606_c1 3300050508 Bacteria 14594
274 nmdc:mga09592_4370_c1 3300050508 Bacteria 11429
275 nmdc:mga0qj67_145_c1 3300050509 Bacteria 41305
276 nmdc:mga0qj67_25115_c1 3300050509 Bacteria 4600
277 nmdc:mga0qj67_470517_c1 3300050509 Bacteria 1012
278 nmdc:mga06r32_111_c1 3300050510 Bacteria 58129
279 nmdc:mga06r32_62705_c1 3300050510 Bacteria 3582
280 nmdc:mga0n895_314476_c1 3300050512 Bacteria 1587
281 nmdc:mga0n895_5853_c1 3300050512 Bacteria 10335
282 nmdc:mga0rr50_281537_c1 3300050513 Bacteria 1388
283 nmdc:mga08x19_188919_c1 3300050514 Bacteria 1409
284 nmdc:mga08x19_23031_c1 3300050514 Bacteria 3862
285 nmdc:mga0a205_248413_c1 3300050515 Bacteria 1659
286 nmdc:mga0a205_326707_c1 3300050515 Bacteria 1404
287 Ga0500583_0156114 3300053092 Bacteria 1136
288 Ga0500583_0280921 3300053092 Bacteria 817
289 Ga0500559_0087958 3300053136 Bacteria 1420
290 Ga0500559_0111277 3300053136 Bacteria 1269
291 Ga0500637_0116088 3300053178 Bacteria 1552
292 Ga0501084_0006584 3300054114 Bacteria 9545
293 Ga0501084_0096480 3300054114 Bacteria 2483
294 Ga0590071_001595 3300059421 Bacteria 5940
295 Ga0501082_0039604 3300060353 Bacteria 4065
296 Ga0501082_0101496 3300060353 Bacteria 2489
297 Ga0466962_0024144 3300061719 Bacteria 2921
298 Ga0466962_0114452 3300061719 Bacteria 1299
299 2819551298 2818991438 Bacteria 5793701
300 2856747210 2856741275 Bacteria 8096094
301 2869051037 2869048445 Bacteria 6875584
302 2895663188 2895660088 Bacteria 3782833
303 2897804105 2897803580 Bacteria 7000062
304 2996222525 2996221748 Bacteria 6799777
305 8054005954 8054002106 Bacteria 7987183
306 Ga0466957_0401691
307 LJQas_1000003
308 JGI25406J46586_10022674
309 rootL2_10027059
310 Ga0065704_10208460
311 Ga0065712_10072223
312 Ga0070683_100096723
313 Ga0070690_100062936
314 Ga0070666_10064006
315 Ga0070680_100234163
316 Ga0070691_10309747
317 Ga0070671_100243287
318 Ga0070674_100571616
319 Ga0070667_100002366
320 Ga0070703_10000069
321 Ga0070703_10002009
322 Ga0070709_10003232
323 Ga0070713_100421959
324 Ga0070711_100000098
325 Ga0070705_100000012
326 Ga0070694_100003833
327 Ga0070708_100089303
328 Ga0070708_100194060
329 Ga0070708_100469282
330 Ga0070708_100666914
331 Ga0070663_100223674
332 Ga0070663_100715387
333 Ga0070681_10022788
334 Ga0070706_100002151
335 Ga0070706_100070213
336 Ga0070706_100186471
337 Ga0070699_100001417
338 Ga0070699_100166344
339 Ga0070697_100013511
340 Ga0070697_100026683
341 Ga0070697_100137404
342 Ga0068853_100109730
343 Ga0070695_100151428
344 Ga0070695_100248948
345 Ga0070695_100457760
346 Ga0070696_100000901
347 Ga0070665_100017884
348 Ga0070665_100019860
349 Ga0070665_100084965
350 Ga0070665_100159171
351 Ga0070704_100067287
352 Ga0068856_100526260
353 Ga0068852_100073398
354 Ga0068851_10328905
355 Ga0068863_100090981
356 Ga0068860_100004430
357 Ga0068862_100018226
358 Ga0081539_10000951
359 Ga0070717_10300830
360 Ga0075428_100226718
361 Ga0075430_100000270
362 Ga0075430_100031513
363 Ga0075430_100040118
364 Ga0075431_100000092
365 Ga0075431_100001948
366 Ga0075433_10202219
367 Ga0075433_10308711
368 Ga0075434_100061829
369 Ga0075434_100314803
370 Ga0075429_100000123
371 Ga0075429_100003363
372 Ga0075429_100094050
373 Ga0079104_1007391
374 Ga0079104_1020957
375 Ga0075435_100010165
376 Ga0075435_100177925
377 Ga0075435_100476678
378 Ga0075435_100777087
379 Ga0099794_10007900
380 Ga0099794_10171641
381 Ga0099795_10116087
382 Ga0105240_10396433
383 Ga0111539_10742488
384 Ga0114129_10017876
385 Ga0114129_10052863
386 Ga0114129_10156707
387 Ga0114129_10167748
388 Ga0114129_10318509
389 Ga0114129_10357025
390 Ga0114129_10390852
391 Ga0105248_10245879
392 Ga0105237_10252844
393 Ga0105238_10149106
394 Ga0105238_10535047
395 Ga0105249_10041840
396 Ga0105239_10002366
397 Ga0105239_10029595
398 Ga0171462_1005
399 Ga0157374_10311731
400 Ga0157378_10521901
401 Ga0163162_10176046
402 Ga0157375_10821356
403 Ga0163163_10009584
404 Ga0207653_10000137
405 Ga0207653_10002549
406 Ga0207680_10144629
407 Ga0207699_10008181
408 Ga0207684_10002174
409 Ga0207684_10034911
410 Ga0207707_10016952
411 Ga0207695_10315589
412 Ga0207663_10000080
413 Ga0207646_10010144
414 Ga0207646_10366161
415 Ga0207681_10035991
416 Ga0207694_10433146
417 Ga0207694_10515957
418 Ga0207659_10765231
419 Ga0207664_10301956
420 Ga0207670_10449656
421 Ga0207711_10377666
422 Ga0207711_10642372
423 Ga0207712_10142707
424 Ga0207712_10596681
425 Ga0207668_10604743
426 Ga0207703_10000284
427 Ga0207639_10350447
428 Ga0207678_10096812
429 Ga0207678_10165180
430 Ga0207641_10000470
431 Ga0207641_10022673
432 Ga0207641_10538058
433 Ga0209281_1016553
434 Ga0209971_1020855
435 Ga0268266_10008978
436 Ga0268266_10013961
437 Ga0268266_10175661
438 Ga0268266_10202003
439 Ga0268265_10012285
440 Ga0268264_10000708
441 Ga0307515_10343573
442 Ga0307511_10053551
443 Ga0316579_10241491
444 Ga0316576_10004941
445 Ga0316576_10009287
446 Ga0316576_10378876
447 Ga0316578_10000965
448 Ga0316577_10029659
449 Ga0316577_10052636
450 Ga0307413_10249377
451 Ga0307409_100070860
452 Ga0307416_100694812
453 Ga0307416_100984043
454 Ga0316585_10124606
455 Ga0316593_10030286
456 Ga0307510_10000018
457 Ga0307510_10031234
458 Ga0316586_1008563
459 Ga0316588_1018698
460 Ga0373926_0291496
461 Ga0373936_0005721
462 Ga0373936_0051615
463 Ga0373954_0066093
464 Ga0373937_0054646
465 Ga0316582_0367231
466 Ga0395901_0138892
467 Ga0400483_101148
468 Ga0436365_1876799
469 Ga0451577_0000110
470 Ga0453683_0019548
471 Ga0453683_0024257
472 Ga0453683_0188368
473 Ga0466961_0112062
474 Ga0453684_0000027
475 Ga0453684_0000152
476 Ga0466957_0187235
477 Ga0466957_0340212
478 Ga0466959_0028122
479 Ga0451576_0093871
480 Ga0495641_0130243
481 Ga0495596_0002646
482 Ga0495606_0010947
483 Ga0495611_0246597
484 Ga0495599_0397872
485 Ga0495670_0053080
486 Ga0495687_083751
487 Ga0495687_146499
488 Ga0495686_0434093
489 Ga0495626_0000459
490 Ga0496101_0015997
491 Ga0496101_0067051
492 Ga0496102_0011734
493 Ga0496102_0024383
494 Ga0496102_0108155
495 Ga0496104_0384512
496 Ga0496105_0002057
497 Ga0496113_0001181
498 Ga0496114_0234488
499 Ga0496116_0000045
500 Ga0496116_0009505
501 Ga0496117_0001025
502 Ga0496118_0000419
503 Ga0496118_0027047
504 Ga0496119_0010201
505 Ga0496120_0000014
506 Ga0496121_0005907
507 Ga0496121_0034386
508 Ga0496122_0010475
509 Ga0496123_0002684
510 Ga0496124_0029446
511 Ga0496124_0033030
512 Ga0496124_0035436
513 Ga0496125_0008726
514 Ga0496125_0008859
515 Ga0496126_0000568
516 Ga0496126_0042371
517 Ga0495682_0084120
518 Ga0501031_0132057
519 Ga0501032_0003270
520 Ga0501032_0016916
521 Ga0501032_0022815
522 Ga0501033_0050215
523 Ga0501034_0039333
524 Ga0501034_0045021
525 Ga0501034_0154913
526 Ga0501036_0011057
527 Ga0501036_0046373
528 Ga0501036_0142204
529 Ga0501037_0028937
530 Ga0501038_0026454
531 Ga0501038_0242209
532 Ga0501039_0007193
533 Ga0501039_0034940
534 Ga0501040_0005328
535 Ga0501040_0586849
536 Ga0501041_0238360
537 Ga0501042_0039838
538 Ga0501043_0003776
539 Ga0501043_0049835
540 Ga0501043_0225521
541 Ga0501043_0476918
542 Ga0501046_0005320
543 Ga0501046_0011536
544 Ga0501046_0078111
545 Ga0501046_0322253
546 Ga0501047_0001473
547 Ga0501047_0041824
548 Ga0501047_0071863
549 Ga0501048_0001983
550 Ga0501048_0064134
551 Ga0501067_0047524
552 Ga0501067_0067097
553 Ga0501068_0048244
554 Ga0501068_0182547
555 Ga0501069_0042503
556 Ga0501069_0079180
557 Ga0501072_0063755
558 Ga0501073_0019716
559 Ga0501073_0022011
560 Ga0501073_0061871
561 Ga0501073_0274388
562 Ga0501074_0383430
563 Ga0501077_0044577
564 Ga0501077_0444532
565 Ga0501079_0152998
566 Ga0501080_0023406
567 Ga0501080_0095686
568 Ga0501080_0587520
569 Ga0501083_0012875
570 Ga0501035_0161719
571 Ga0501044_0023129
572 Ga0501044_0811163
573 nmdc:mga05p37_147118_c1
574 nmdc:mga05p37_162125_c1
575 nmdc:mga05p37_632673_c1
576 nmdc:mga09592_137786_c1
577 nmdc:mga09592_16194_c1
578 nmdc:mga09592_2606_c1
579 nmdc:mga09592_4370_c1
580 nmdc:mga0qj67_145_c1
581 nmdc:mga0qj67_25115_c1
582 nmdc:mga0qj67_470517_c1
583 nmdc:mga06r32_111_c1
584 nmdc:mga06r32_62705_c1
585 nmdc:mga0n895_314476_c1
586 nmdc:mga0n895_5853_c1
587 nmdc:mga0rr50_281537_c1
588 nmdc:mga08x19_188919_c1
589 nmdc:mga08x19_23031_c1
590 nmdc:mga0a205_248413_c1
591 nmdc:mga0a205_326707_c1
592 Ga0500583_0156114
593 Ga0500583_0280921
594 Ga0500559_0087958
595 Ga0500559_0111277
596 Ga0500637_0116088
597 Ga0501084_0006584
598 Ga0501084_0096480
599 Ga0590071_001595
600 Ga0501082_0039604
601 Ga0501082_0101496
602 Ga0466962_0024144
603 Ga0466962_0114452
604 2819551298
605 2856747210
606 2869051037
607 2895663188
608 2897804105
609 2996222525
610 8054005954

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06508

QueC

Queuosine biosynthesis protein QueC

23

239

0.97

PF00733

Asn_synthase

Asparagine synthase

11

88

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pg3-assembly1.cif.gz_A-2 crystal structure of a queuosine biosynthesis protein quec (eca1155) from erwinia carotovora subsp. atroseptica scri1043 at 2.40 a resolution 0.8172 3 219
3bl5-assembly1.cif.gz_A crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8136 3 219
3bl5-assembly6.cif.gz_F crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8132 3 219
3bl5-assembly1.cif.gz_A crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.7941 3 219
3bl5-assembly6.cif.gz_F crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.7939 3 219
ID Description Score Start End Superfamily
af_Q58742_1_231_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9203 4 226 3.40.50.620
af_Q58742_1_231_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8931 4 226 3.40.50.620
af_Q2G1X6_7_221_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8798 3 218 3.40.50.620
af_Q2G1X6_7_221_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8486 3 218 3.40.50.620
1korA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7479 4 185 3.40.50.620
ID Description Score Start End GO Terms
AF-A6WGA4-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.9918 1 229 GO:0005524
GO:0008270
GO:0008616
GO:0016879
AF-A0A518GF15-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.9918 1 223 GO:0005524
GO:0008270
GO:0008616
GO:0016879
AF-A0A7W7PUU2-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.9893 1 229 GO:0005524
GO:0008270
GO:0008616
GO:0016879
AF-A0A2E4E1W9-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.9889 1 226 GO:0005524
GO:0008270
GO:0008616
GO:0016879
AF-Q9ZCM9-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.9872 3 226 GO:0005524
GO:0008270
GO:0008616
GO:0016879

Map