F396280

General Info

Members Datasets Scaffolds Average Seq Length
302 183 604 425

Family's Representative Sequence

Representative Sequence 3300005295|Ga0065707_10004522|Ga0065707_100045222
Length 459
Sequence MRRFDVLESDAAYRSAGNESASGIMPASLFHYSYPGVPVSFLYQLLICIAAPLVFLATCLRGVRDRSYRDRLWERFGFTQLKFSQSPIWLHAVSVGEVQAATPLIRRLLLNSAQRPVLITTSTPTGAARVKALFGEQLSHAYLPYDTAAAVRRFLRRVEPYGVIIMETELWPNLLSECAQQHLPIVLGSARISSRTAARYQQLRALFARSMPAVKVGAQTAADAERLLGLGALPEHVRVTGNIKFDIEISDSVRATGVAIRKHWAQRLAWIAGSTHDGEEQQVLTAHQVVLATQPDALLVLAPRHPQRFAQVAALLKAHNIEFVTRSSQQPVLPQHSVLLLDTLGDLTSFYAASDVAFVGGSLVPVGGHNLLEPAALGLPVITGPHTFNAPDVADQFAERGALRYVYSGKELGEVVLELLNSPTERNRQAMLAQAFVQENRGALARLLELINEAGIKAS

Samples

Sample ID Description Type Environment
1 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
58 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
114 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
115 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
116 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
117 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
118 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
119 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
120 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
121 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
122 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
123 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
124 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
125 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
126 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
127 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
128 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
129 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
130 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
131 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
132 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
133 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
134 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
135 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
136 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
137 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
139 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
140 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
141 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
142 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
143 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
144 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
145 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
146 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
147 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
148 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
149 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
150 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
151 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
152 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
153 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
154 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
155 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
156 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
161 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
162 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
163 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
164 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
168 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
169 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
170 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
171 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
172 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
173 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
174 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
177 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
178 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
179 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
180 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
181 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
182 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
183 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.67
Metatranscriptomes 0.33
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.99
Nodule 0
Rhizoplane 4.3
Rhizosphere 93.05
Stem 0
Stem Tuber 0
Unclassified 3.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10004522 3300005295 Bacteria 4381
2 Ga0065704_10008994 3300005289 Bacteria 2882
3 Ga0065712_10069626 3300005290 Bacteria 6955
4 Ga0065715_10147589 3300005293 Bacteria 1745
5 Ga0070676_10070345 3300005328 Bacteria 2099
6 Ga0070676_10190439 3300005328 Bacteria 1339
7 Ga0070683_100006754 3300005329 Bacteria 9636
8 Ga0070690_100003674 3300005330 Bacteria 8447
9 Ga0070670_100079518 3300005331 Unclassified 2818
10 Ga0070677_10047321 3300005333 Bacteria 1724
11 Ga0068869_100014781 3300005334 Bacteria 5222
12 Ga0070666_10004230 3300005335 Bacteria 8715
13 Ga0070680_100010762 3300005336 Bacteria 7061
14 Ga0068868_100003468 3300005338 Bacteria 10984
15 Ga0070687_100023076 3300005343 Bacteria 2952
16 Ga0070661_100009477 3300005344 Bacteria 6743
17 Ga0070661_100029518 3300005344 Bacteria 3959
18 Ga0070668_100014184 3300005347 Bacteria 5952
19 Ga0070669_100178875 3300005353 Bacteria 1658
20 Ga0070669_100183866 3300005353 Bacteria 1636
21 Ga0070671_100074641 3300005355 Bacteria 2833
22 Ga0070673_100000485 3300005364 Bacteria 21135
23 Ga0070673_100159280 3300005364 Bacteria 1918
24 Ga0070688_100021203 3300005365 Bacteria 3792
25 Ga0070667_100017559 3300005367 Bacteria 5930
26 Ga0070667_100045642 3300005367 Bacteria 3685
27 Ga0070713_100018030 3300005436 Bacteria 5360
28 Ga0070701_10020246 3300005438 Bacteria 3157
29 Ga0070705_100006176 3300005440 Bacteria 5865
30 Ga0070700_100026643 3300005441 Bacteria 3417
31 Ga0070663_100169224 3300005455 Bacteria 1688
32 Ga0070662_100010465 3300005457 Bacteria 6089
33 Ga0070662_100011131 3300005457 Bacteria 5925
34 Ga0070662_100219713 3300005457 Bacteria 1516
35 Ga0070681_10147404 3300005458 Bacteria 2282
36 Ga0068867_100156702 3300005459 Bacteria 1793
37 Ga0070685_10131762 3300005466 Bacteria 1564
38 Ga0070684_100008917 3300005535 Bacteria 7872
39 Ga0070672_100021716 3300005543 Bacteria 4701
40 Ga0070672_100099058 3300005543 Bacteria 2362
41 Ga0070672_100254026 3300005543 Bacteria 1481
42 Ga0070686_100009227 3300005544 Bacteria 5537
43 Ga0070686_100014641 3300005544 Bacteria 4525
44 Ga0070696_100030071 3300005546 Bacteria 3717
45 Ga0070665_100004688 3300005548 Bacteria 14273
46 Ga0070665_100012682 3300005548 Bacteria 8488
47 Ga0070665_100020640 3300005548 Bacteria 6619
48 Ga0070665_100049580 3300005548 Bacteria 4212
49 Ga0068855_100001687 3300005563 Bacteria 27651
50 Ga0068855_100003295 3300005563 Bacteria 19776
51 Ga0070664_100000115 3300005564 Bacteria 53033
52 Ga0068857_100014533 3300005577 Bacteria 6866
53 Ga0068857_100051783 3300005577 Unclassified 3643
54 Ga0070702_100006881 3300005615 Bacteria 5412
55 Ga0070702_100008944 3300005615 Bacteria 4876
56 Ga0068859_100000621 3300005617 Bacteria 35451
57 Ga0068859_100015386 3300005617 Bacteria 7685
58 Ga0068859_100035756 3300005617 Bacteria 4985
59 Ga0068859_100060017 3300005617 Bacteria 3832
60 Ga0068864_100025608 3300005618 Bacteria 4971
61 Ga0068866_10071027 3300005718 Unclassified 1840
62 Ga0068861_100009408 3300005719 Bacteria 6744
63 Ga0068861_100014955 3300005719 Bacteria 5457
64 Ga0068861_100016954 3300005719 Bacteria 5165
65 Ga0068861_100074259 3300005719 Bacteria 2644
66 Ga0068861_100093736 3300005719 Bacteria 2375
67 Ga0068861_100279662 3300005719 Bacteria 1436
68 Ga0068861_100307037 3300005719 Bacteria 1376
69 Ga0068870_10064787 3300005840 Bacteria 1975
70 Ga0068863_100005879 3300005841 Bacteria 12023
71 Ga0068863_100039231 3300005841 Bacteria 4507
72 Ga0068863_100051730 3300005841 Bacteria 3892
73 Ga0068863_100056808 3300005841 Bacteria 3705
74 Ga0068858_100010907 3300005842 Bacteria 8590
75 Ga0068858_100044773 3300005842 Bacteria 4102
76 Ga0068860_100015557 3300005843 Bacteria 7430
77 Ga0068860_100019912 3300005843 Bacteria 6507
78 Ga0068862_100001008 3300005844 Bacteria 27023
79 Ga0068862_100014699 3300005844 Bacteria 6502
80 Ga0068862_100052560 3300005844 Bacteria 3486
81 Ga0097621_100009429 3300006237 Bacteria 7082
82 Ga0097621_100009768 3300006237 Bacteria 6985
83 Ga0097621_100111857 3300006237 Bacteria 2308
84 Ga0097621_100162741 3300006237 Bacteria 1919
85 Ga0068871_100003676 3300006358 Bacteria 10541
86 Ga0075428_100000513 3300006844 Bacteria 39370
87 Ga0075428_100002895 3300006844 Bacteria 18673
88 Ga0075428_100090008 3300006844 Unclassified 3347
89 Ga0075428_100169734 3300006844 Bacteria 2365
90 Ga0075428_100179931 3300006844 Bacteria 2289
91 Ga0075428_100332997 3300006844 Bacteria 1631
92 Ga0075430_100000531 3300006846 Bacteria 28688
93 Ga0075430_100008062 3300006846 Bacteria 8902
94 Ga0075430_100008233 3300006846 Bacteria 8807
95 Ga0075431_100002120 3300006847 Bacteria 18954
96 Ga0075431_100043162 3300006847 Unclassified 4653
97 Ga0075431_100091128 3300006847 Bacteria 3146
98 Ga0075431_100107853 3300006847 Bacteria 2874
99 Ga0075429_100001206 3300006880 Bacteria 20964
100 Ga0075429_100011223 3300006880 Bacteria 7755
101 Ga0075429_100052784 3300006880 Bacteria 3537
102 Ga0068865_100017044 3300006881 Bacteria 4663
103 Ga0068865_100096164 3300006881 Bacteria 2159
104 Ga0068865_100180602 3300006881 Bacteria 1625
105 Ga0097620_100000621 3300006931 Bacteria 35451
106 Ga0097620_100015386 3300006931 Bacteria 7685
107 Ga0097620_100035757 3300006931 Bacteria 4985
108 Ga0097620_100060014 3300006931 Bacteria 3832
109 Ga0099795_10000018 3300007788 Bacteria 61029
110 Ga0105250_10000010 3300009092 Bacteria 298384
111 Ga0105240_10002376 3300009093 Bacteria 30348
112 Ga0105240_10160359 3300009093 Bacteria 2672
113 Ga0105240_10179559 3300009093 Bacteria 2499
114 Ga0111539_10002511 3300009094 Bacteria 24312
115 Ga0111539_10177451 3300009094 Bacteria 2489
116 Ga0111539_10385306 3300009094 Bacteria 1632
117 Ga0114129_10000367 3300009147 Bacteria 52338
118 Ga0114129_10019254 3300009147 Bacteria 9723
119 Ga0105248_10011409 3300009177 Bacteria 9793
120 Ga0105237_10107470 3300009545 Bacteria 2782
121 Ga0105238_10026414 3300009551 Bacteria 5920
122 Ga0105238_10098695 3300009551 Bacteria 2904
123 Ga0105249_10012908 3300009553 Bacteria 7370
124 Ga0099796_10000081 3300010159 Bacteria 15981
125 Ga0105239_10033174 3300010375 Bacteria 5670
126 Ga0157369_10057712 3300013105 Unclassified 4186
127 Ga0163162_10024122 3300013306 Bacteria 6003
128 Ga0157375_10025643 3300013308 Bacteria 5482
129 Ga0163163_10000485 3300014325 Bacteria 35984
130 Ga0163163_10065746 3300014325 Bacteria 3601
131 Ga0157380_10130575 3300014326 Bacteria 2142
132 Ga0157377_10027967 3300014745 Bacteria 3031
133 Ga0157379_10000022 3300014968 Bacteria 90949
134 Ga0157379_10057092 3300014968 Bacteria 3489
135 Ga0207696_1000133 3300025711 Bacteria 131987
136 Ga0207642_10047540 3300025899 Bacteria 1918
137 Ga0207680_10019577 3300025903 Bacteria 3622
138 Ga0207645_10001743 3300025907 Bacteria 17646
139 Ga0207643_10003509 3300025908 Bacteria 8433
140 Ga0207707_10046027 3300025912 Bacteria 3800
141 Ga0207695_10011760 3300025913 Bacteria 10573
142 Ga0207695_10114453 3300025913 Bacteria 2672
143 Ga0207662_10018503 3300025918 Bacteria 3954
144 Ga0207694_10031376 3300025924 Bacteria 4058
145 Ga0207694_10163684 3300025924 Bacteria 1798
146 Ga0207650_10018216 3300025925 Unclassified 4926
147 Ga0207659_10043147 3300025926 Bacteria 3166
148 Ga0207644_10080204 3300025931 Bacteria 2410
149 Ga0207706_10002830 3300025933 Bacteria 16828
150 Ga0207706_10003859 3300025933 Bacteria 14275
151 Ga0207706_10190028 3300025933 Bacteria 1803
152 Ga0207709_10041374 3300025935 Bacteria 2765
153 Ga0207691_10002444 3300025940 Bacteria 18164
154 Ga0207691_10004232 3300025940 Bacteria 13942
155 Ga0207691_10017701 3300025940 Bacteria 6754
156 Ga0207691_10026639 3300025940 Bacteria 5424
157 Ga0207711_10005584 3300025941 Bacteria 10632
158 Ga0207689_10005007 3300025942 Bacteria 11934
159 Ga0207689_10032612 3300025942 Bacteria 4331
160 Ga0207679_10001126 3300025945 Bacteria 17023
161 Ga0207679_10033466 3300025945 Bacteria 3617
162 Ga0207679_10255781 3300025945 Bacteria 1491
163 Ga0207667_10003028 3300025949 Bacteria 20860
164 Ga0207667_10004006 3300025949 Bacteria 18099
165 Ga0207712_10224934 3300025961 Bacteria 1502
166 Ga0207658_10009442 3300025986 Bacteria 6616
167 Ga0207677_10032449 3300026023 Bacteria 3357
168 Ga0207703_10019057 3300026035 Bacteria 5360
169 Ga0207708_10006962 3300026075 Bacteria 8361
170 Ga0207708_10036117 3300026075 Bacteria 3761
171 Ga0207708_10058266 3300026075 Bacteria 2947
172 Ga0207708_10091937 3300026075 Bacteria 2340
173 Ga0207641_10030640 3300026088 Bacteria 4456
174 Ga0207648_10082922 3300026089 Bacteria 2796
175 Ga0207676_10008395 3300026095 Bacteria 7341
176 Ga0207676_10348732 3300026095 Bacteria 1368
177 Ga0207674_10041192 3300026116 Bacteria 4778
178 Ga0207674_10072463 3300026116 Bacteria 3461
179 Ga0207675_100000136 3300026118 Bacteria 62435
180 Ga0207675_100000712 3300026118 Bacteria 32952
181 Ga0207675_100001810 3300026118 Bacteria 21423
182 Ga0207675_100128117 3300026118 Bacteria 2405
183 Ga0207675_100141292 3300026118 Bacteria 2287
184 Ga0207683_10017418 3300026121 Bacteria 6123
185 Ga0209179_1000042 3300027512 Bacteria 26020
186 Ga0209970_1002985 3300027614 Bacteria 2855
187 Ga0209983_1004472 3300027665 Bacteria 2937
188 Ga0209998_10000241 3300027717 Bacteria 18179
189 Ga0209974_10000483 3300027876 Bacteria 13279
190 Ga0207428_10001638 3300027907 Bacteria 23290
191 Ga0207428_10013666 3300027907 Bacteria 7081
192 Ga0268266_10000228 3300028379 Bacteria 97214
193 Ga0268266_10012817 3300028379 Bacteria 7240
194 Ga0268266_10014585 3300028379 Bacteria 6753
195 Ga0268266_10047472 3300028379 Bacteria 3679
196 Ga0268265_10005636 3300028380 Bacteria 8555
197 Ga0268265_10005860 3300028380 Bacteria 8376
198 Ga0268265_10035532 3300028380 Bacteria 3642
199 Ga0265334_10000132 3300028573 Bacteria 46945
200 Ga0265318_10002352 3300028577 Bacteria 10135
201 Ga0265338_10021323 3300028800 Bacteria 6762
202 Ga0265328_10007048 3300031239 Bacteria 4713
203 Ga0265328_10018649 3300031239 Bacteria 2672
204 Ga0265325_10003287 3300031241 Bacteria 10628
205 Ga0265340_10046743 3300031247 Bacteria 2110
206 Ga0265339_10012351 3300031249 Bacteria 5218
207 Ga0265331_10001014 3300031250 Bacteria 21947
208 Ga0265316_10054009 3300031344 Bacteria 3146
209 Ga0307513_10013928 3300031456 Bacteria 9854
210 Ga0307513_10056554 3300031456 Bacteria 4187
211 Ga0307509_10000554 3300031507 Bacteria 63868
212 Ga0307408_100028748 3300031548 Bacteria 3845
213 Ga0307408_100072525 3300031548 Bacteria 2549
214 Ga0307408_100201431 3300031548 Unclassified 1611
215 Ga0265313_10002442 3300031595 Bacteria 16038
216 Ga0316575_10038201 3300031665 Bacteria 1893
217 Ga0265314_10012937 3300031711 Bacteria 6776
218 Ga0265342_10018098 3300031712 Bacteria 4571
219 Ga0307405_10011482 3300031731 Bacteria 4646
220 Ga0307405_10118633 3300031731 Bacteria 1806
221 Ga0307405_10143040 3300031731 Bacteria 1671
222 Ga0307406_10015685 3300031901 Bacteria 4391
223 Ga0307407_10067422 3300031903 Bacteria 2115
224 Ga0307412_10198618 3300031911 Bacteria 1521
225 Ga0307409_100001824 3300031995 Bacteria 10814
226 Ga0307416_100247217 3300032002 Unclassified 1733
227 Ga0307414_10090156 3300032004 Bacteria 2275
228 Ga0307411_10143581 3300032005 Bacteria 1763
229 Ga0316593_10003933 3300032168 Bacteria 3752
230 Ga0316574_0001208 3300035398 Bacteria 11997
231 Ga0316574_0004406 3300035398 Bacteria 7368
232 Ga0316574_0012809 3300035398 Bacteria 4806
233 Ga0316574_0085712 3300035398 Bacteria 2004
234 Ga0373937_0232721 3300036401 Bacteria 1735
235 Ga0316582_0002071 3300036647 Bacteria 9250
236 Ga0316582_0005265 3300036647 Bacteria 6637
237 Ga0316584_0025657 3300036712 Bacteria 4324
238 Ga0451807_1234734 3300041486 Bacteria 4555
239 Ga0451853_3010685 3300041512 Bacteria 2961
240 Ga0439442_008217 3300042002 Bacteria 2106
241 Ga0451577_0049574 3300042876 Bacteria 3749
242 Ga0466969_0002477 3300044656 Bacteria 9857
243 Ga0453684_0059848 3300044712 Bacteria 4905
244 Ga0453684_0097306 3300044712 Bacteria 3612
245 Ga0466959_0018605 3300045049 Bacteria 5102
246 Ga0466959_0025456 3300045049 Bacteria 4385
247 Ga0466959_0049084 3300045049 Bacteria 3101
248 Ga0451576_0014745 3300045051 Bacteria 8687
249 Ga0451576_0101265 3300045051 Bacteria 2996
250 Ga0451576_0112259 3300045051 Bacteria 2837
251 Ga0451576_0166986 3300045051 Bacteria 2297
252 Ga0466958_0038914 3300045836 Bacteria 2855
253 Ga0495590_0007735 3300046457 Bacteria 4128
254 Ga0495638_0002365 3300046460 Bacteria 15446
255 Ga0495638_0071208 3300046460 Bacteria 2127
256 Ga0495630_0091331 3300046517 Bacteria 2301
257 Ga0495649_0006699 3300046694 Bacteria 7146
258 Ga0496104_0015312 3300048907 Bacteria 6944
259 Ga0496104_0114542 3300048907 Bacteria 2586
260 Ga0496105_0002438 3300048908 Bacteria 13463
261 Ga0496106_0066158 3300048909 Bacteria 2752
262 Ga0496106_0077672 3300048909 Bacteria 2546
263 Ga0496108_0018129 3300048911 Bacteria 5759
264 Ga0496108_0152114 3300048911 Bacteria 1997
265 Ga0496109_0003552 3300048912 Bacteria 13011
266 Ga0496109_0057645 3300048912 Bacteria 3546
267 Ga0496111_0025018 3300048914 Bacteria 4211
268 Ga0496114_0033053 3300048917 Bacteria 4261
269 Ga0496114_0047094 3300048917 Bacteria 3585
270 Ga0496126_0003544 3300048929 Bacteria 19629
271 Ga0501299_001737 3300049522 Unclassified 2890
272 Ga0501036_0119911 3300049572 Bacteria 2222
273 Ga0501068_0000568 3300049584 Bacteria 18814
274 Ga0501070_0004068 3300049586 Bacteria 12570
275 Ga0501071_0000386 3300049587 Bacteria 21675
276 Ga0501072_0109714 3300049588 Bacteria 2196
277 Ga0501073_0001940 3300049589 Bacteria 15409
278 Ga0501074_0001023 3300049590 Bacteria 18214
279 Ga0501076_0239551 3300049592 Bacteria 1484
280 Ga0501079_0000548 3300049741 Bacteria 24527
281 Ga0501080_0001036 3300049742 Bacteria 22876
282 Ga0501081_0011861 3300049743 Bacteria 5709
283 nmdc:mga05p37_16896_c1 3300050507 Bacteria 8798
284 nmdc:mga05p37_21981_c1 3300050507 Bacteria 7728
285 nmdc:mga09592_128_c1 3300050508 Bacteria 49025
286 nmdc:mga09592_179554_c1 3300050508 Bacteria 1831
287 nmdc:mga09592_20178_c1 3300050508 Bacteria 5477
288 nmdc:mga09592_382_c1 3300050508 Bacteria 30145
289 nmdc:mga09592_43171_c1 3300050508 Bacteria 3794
290 nmdc:mga0qj67_335613_c1 3300050509 Bacteria 1223
291 nmdc:mga0qj67_3892_c1 3300050509 Bacteria 10783
292 nmdc:mga0qj67_66749_c1 3300050509 Bacteria 2866
293 nmdc:mga06r32_1283_c1 3300050510 Bacteria 22612
294 nmdc:mga06r32_195170_c1 3300050510 Bacteria 2012
295 nmdc:mga06r32_2703_c1 3300050510 Bacteria 15866
296 nmdc:mga06r32_345_c1 3300050510 Bacteria 38669
297 nmdc:mga08y16_2119_c1 3300050511 Bacteria 20346
298 nmdc:mga08y16_54355_c1 3300050511 Bacteria 4184
299 Ga0500658_0033160 3300053134 Bacteria 2029
300 Ga0500568_0014500 3300053139 Bacteria 3557
301 Ga0500622_0003268 3300053156 Bacteria 10991
302 Ga0501082_0007435 3300060353 Bacteria 9452
303 Ga0065707_10004522
304 Ga0065704_10008994
305 Ga0065712_10069626
306 Ga0065715_10147589
307 Ga0070676_10070345
308 Ga0070676_10190439
309 Ga0070683_100006754
310 Ga0070690_100003674
311 Ga0070670_100079518
312 Ga0070677_10047321
313 Ga0068869_100014781
314 Ga0070666_10004230
315 Ga0070680_100010762
316 Ga0068868_100003468
317 Ga0070687_100023076
318 Ga0070661_100009477
319 Ga0070661_100029518
320 Ga0070668_100014184
321 Ga0070669_100178875
322 Ga0070669_100183866
323 Ga0070671_100074641
324 Ga0070673_100000485
325 Ga0070673_100159280
326 Ga0070688_100021203
327 Ga0070667_100017559
328 Ga0070667_100045642
329 Ga0070713_100018030
330 Ga0070701_10020246
331 Ga0070705_100006176
332 Ga0070700_100026643
333 Ga0070663_100169224
334 Ga0070662_100010465
335 Ga0070662_100011131
336 Ga0070662_100219713
337 Ga0070681_10147404
338 Ga0068867_100156702
339 Ga0070685_10131762
340 Ga0070684_100008917
341 Ga0070672_100021716
342 Ga0070672_100099058
343 Ga0070672_100254026
344 Ga0070686_100009227
345 Ga0070686_100014641
346 Ga0070696_100030071
347 Ga0070665_100004688
348 Ga0070665_100012682
349 Ga0070665_100020640
350 Ga0070665_100049580
351 Ga0068855_100001687
352 Ga0068855_100003295
353 Ga0070664_100000115
354 Ga0068857_100014533
355 Ga0068857_100051783
356 Ga0070702_100006881
357 Ga0070702_100008944
358 Ga0068859_100000621
359 Ga0068859_100015386
360 Ga0068859_100035756
361 Ga0068859_100060017
362 Ga0068864_100025608
363 Ga0068866_10071027
364 Ga0068861_100009408
365 Ga0068861_100014955
366 Ga0068861_100016954
367 Ga0068861_100074259
368 Ga0068861_100093736
369 Ga0068861_100279662
370 Ga0068861_100307037
371 Ga0068870_10064787
372 Ga0068863_100005879
373 Ga0068863_100039231
374 Ga0068863_100051730
375 Ga0068863_100056808
376 Ga0068858_100010907
377 Ga0068858_100044773
378 Ga0068860_100015557
379 Ga0068860_100019912
380 Ga0068862_100001008
381 Ga0068862_100014699
382 Ga0068862_100052560
383 Ga0097621_100009429
384 Ga0097621_100009768
385 Ga0097621_100111857
386 Ga0097621_100162741
387 Ga0068871_100003676
388 Ga0075428_100000513
389 Ga0075428_100002895
390 Ga0075428_100090008
391 Ga0075428_100169734
392 Ga0075428_100179931
393 Ga0075428_100332997
394 Ga0075430_100000531
395 Ga0075430_100008062
396 Ga0075430_100008233
397 Ga0075431_100002120
398 Ga0075431_100043162
399 Ga0075431_100091128
400 Ga0075431_100107853
401 Ga0075429_100001206
402 Ga0075429_100011223
403 Ga0075429_100052784
404 Ga0068865_100017044
405 Ga0068865_100096164
406 Ga0068865_100180602
407 Ga0097620_100000621
408 Ga0097620_100015386
409 Ga0097620_100035757
410 Ga0097620_100060014
411 Ga0099795_10000018
412 Ga0105250_10000010
413 Ga0105240_10002376
414 Ga0105240_10160359
415 Ga0105240_10179559
416 Ga0111539_10002511
417 Ga0111539_10177451
418 Ga0111539_10385306
419 Ga0114129_10000367
420 Ga0114129_10019254
421 Ga0105248_10011409
422 Ga0105237_10107470
423 Ga0105238_10026414
424 Ga0105238_10098695
425 Ga0105249_10012908
426 Ga0099796_10000081
427 Ga0105239_10033174
428 Ga0157369_10057712
429 Ga0163162_10024122
430 Ga0157375_10025643
431 Ga0163163_10000485
432 Ga0163163_10065746
433 Ga0157380_10130575
434 Ga0157377_10027967
435 Ga0157379_10000022
436 Ga0157379_10057092
437 Ga0207696_1000133
438 Ga0207642_10047540
439 Ga0207680_10019577
440 Ga0207645_10001743
441 Ga0207643_10003509
442 Ga0207707_10046027
443 Ga0207695_10011760
444 Ga0207695_10114453
445 Ga0207662_10018503
446 Ga0207694_10031376
447 Ga0207694_10163684
448 Ga0207650_10018216
449 Ga0207659_10043147
450 Ga0207644_10080204
451 Ga0207706_10002830
452 Ga0207706_10003859
453 Ga0207706_10190028
454 Ga0207709_10041374
455 Ga0207691_10002444
456 Ga0207691_10004232
457 Ga0207691_10017701
458 Ga0207691_10026639
459 Ga0207711_10005584
460 Ga0207689_10005007
461 Ga0207689_10032612
462 Ga0207679_10001126
463 Ga0207679_10033466
464 Ga0207679_10255781
465 Ga0207667_10003028
466 Ga0207667_10004006
467 Ga0207712_10224934
468 Ga0207658_10009442
469 Ga0207677_10032449
470 Ga0207703_10019057
471 Ga0207708_10006962
472 Ga0207708_10036117
473 Ga0207708_10058266
474 Ga0207708_10091937
475 Ga0207641_10030640
476 Ga0207648_10082922
477 Ga0207676_10008395
478 Ga0207676_10348732
479 Ga0207674_10041192
480 Ga0207674_10072463
481 Ga0207675_100000136
482 Ga0207675_100000712
483 Ga0207675_100001810
484 Ga0207675_100128117
485 Ga0207675_100141292
486 Ga0207683_10017418
487 Ga0209179_1000042
488 Ga0209970_1002985
489 Ga0209983_1004472
490 Ga0209998_10000241
491 Ga0209974_10000483
492 Ga0207428_10001638
493 Ga0207428_10013666
494 Ga0268266_10000228
495 Ga0268266_10012817
496 Ga0268266_10014585
497 Ga0268266_10047472
498 Ga0268265_10005636
499 Ga0268265_10005860
500 Ga0268265_10035532
501 Ga0265334_10000132
502 Ga0265318_10002352
503 Ga0265338_10021323
504 Ga0265328_10007048
505 Ga0265328_10018649
506 Ga0265325_10003287
507 Ga0265340_10046743
508 Ga0265339_10012351
509 Ga0265331_10001014
510 Ga0265316_10054009
511 Ga0307513_10013928
512 Ga0307513_10056554
513 Ga0307509_10000554
514 Ga0307408_100028748
515 Ga0307408_100072525
516 Ga0307408_100201431
517 Ga0265313_10002442
518 Ga0316575_10038201
519 Ga0265314_10012937
520 Ga0265342_10018098
521 Ga0307405_10011482
522 Ga0307405_10118633
523 Ga0307405_10143040
524 Ga0307406_10015685
525 Ga0307407_10067422
526 Ga0307412_10198618
527 Ga0307409_100001824
528 Ga0307416_100247217
529 Ga0307414_10090156
530 Ga0307411_10143581
531 Ga0316593_10003933
532 Ga0316574_0001208
533 Ga0316574_0004406
534 Ga0316574_0012809
535 Ga0316574_0085712
536 Ga0373937_0232721
537 Ga0316582_0002071
538 Ga0316582_0005265
539 Ga0316584_0025657
540 Ga0451807_1234734
541 Ga0451853_3010685
542 Ga0439442_008217
543 Ga0451577_0049574
544 Ga0466969_0002477
545 Ga0453684_0059848
546 Ga0453684_0097306
547 Ga0466959_0018605
548 Ga0466959_0025456
549 Ga0466959_0049084
550 Ga0451576_0014745
551 Ga0451576_0101265
552 Ga0451576_0112259
553 Ga0451576_0166986
554 Ga0466958_0038914
555 Ga0495590_0007735
556 Ga0495638_0002365
557 Ga0495638_0071208
558 Ga0495630_0091331
559 Ga0495649_0006699
560 Ga0496104_0015312
561 Ga0496104_0114542
562 Ga0496105_0002438
563 Ga0496106_0066158
564 Ga0496106_0077672
565 Ga0496108_0018129
566 Ga0496108_0152114
567 Ga0496109_0003552
568 Ga0496109_0057645
569 Ga0496111_0025018
570 Ga0496114_0033053
571 Ga0496114_0047094
572 Ga0496126_0003544
573 Ga0501299_001737
574 Ga0501036_0119911
575 Ga0501068_0000568
576 Ga0501070_0004068
577 Ga0501071_0000386
578 Ga0501072_0109714
579 Ga0501073_0001940
580 Ga0501074_0001023
581 Ga0501076_0239551
582 Ga0501079_0000548
583 Ga0501080_0001036
584 Ga0501081_0011861
585 nmdc:mga05p37_16896_c1
586 nmdc:mga05p37_21981_c1
587 nmdc:mga09592_128_c1
588 nmdc:mga09592_179554_c1
589 nmdc:mga09592_20178_c1
590 nmdc:mga09592_382_c1
591 nmdc:mga09592_43171_c1
592 nmdc:mga0qj67_335613_c1
593 nmdc:mga0qj67_3892_c1
594 nmdc:mga0qj67_66749_c1
595 nmdc:mga06r32_1283_c1
596 nmdc:mga06r32_195170_c1
597 nmdc:mga06r32_2703_c1
598 nmdc:mga06r32_345_c1
599 nmdc:mga08y16_2119_c1
600 nmdc:mga08y16_54355_c1
601 Ga0500658_0033160
602 Ga0500568_0014500
603 Ga0500622_0003268
604 Ga0501082_0007435

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04413

Glycos_transf_N

3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)

70

247

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bfc-assembly1.cif.gz_A crystal structure of the c-terminal cmp-kdo binding domain of waaa from acinetobacter baumannii 0.8149 213 421
4bfc-assembly1.cif.gz_A crystal structure of the c-terminal cmp-kdo binding domain of waaa from acinetobacter baumannii 0.8109 213 421
2xci-assembly1.cif.gz_A membrane-embedded monofunctional glycosyltransferase waaa of aquifex aeolicus, substrate-free form 0.7637 47 416
1zct-assembly1.cif.gz_A structure of glycogenin truncated at residue 270 in a complex with udp 0.7283 45 106
2xci-assembly1.cif.gz_A membrane-embedded monofunctional glycosyltransferase waaa of aquifex aeolicus, substrate-free form 0.7225 47 416
ID Description Score Start End Superfamily
af_P0AC75_216_403_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9755 216 401 3.40.50.2000
af_P0AC75_216_403_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9603 216 401 3.40.50.2000
af_P0AC75_41_209_3.40.50.11720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain 0.9573 40 207 3.40.50.11720
af_P0AC75_41_209_3.40.50.11720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain 0.9463 40 207 3.40.50.11720
af_A0A1D6N6V1_228_387_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9426 246 400 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A5E6N6T4-F1-model_v4 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) 0.9831 306 399 GO:0005886
GO:0009244
GO:0009245
GO:0043842
AF-A0A352KRL0-F1-model_v4 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) 0.9773 261 399 GO:0005886
GO:0009244
GO:0009245
GO:0043842
AF-A0A3N5FEA3-F1-model_v4 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) 0.9764 187 419 GO:0005886
GO:0009244
GO:0009245
GO:0043842
AF-A0A3B0ZQE2-F1-model_v4 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) 0.9736 238 419 GO:0005886
GO:0009245
GO:0043842
AF-A0A5R8QSA4-F1-model_v4 deleted 0.9699 125 421

Map