F392376

General Info

Members Datasets Scaffolds Average Seq Length
294 217 588 551

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2524023250|2524611639
Length 641
Sequence SPLESFKRATAATVRAMADRRDLTVGFSAEPAGVSGARVRVPLPPRDLNSREVATVRGAADAAALRLRHHDAAIHAHRLPQSDQARQSYEALEQARVEAIGALEMRGVAGNLEASLEEKYRKAGFDRIQDREQVPLADALRLLAREAMTGATPPASAAGAVHLWRDTVEQKLGTALSDLAGLIHDQDAYAKAVRRLLSDMDMDVGADPTDEDEGAEDKASDEAPQDGGEDDSENQGGQQQSGEDDSQQMTEQQRRQVREEEAASADEGEQGEGEMAEGEGSEEPGSPSTQPHHDRRNEPDPAAYRAYTTAFDEVVDAADLCDADELARLRLMLDQQLQHLQGMISKLANRLQRRLLAKQTRSWEFDLEEGMLDAARLARVVINPMTPLSFKRENETDFRDTVVTLLIDNSGSMRGRPISIAAMSADILSRTLERCGVKVEILGFTTRAWKGGQSRERWIADGKPANPGRLNDLRHIIYKAADAPWRRVRRNLGLMLREGILKENIDGEALLWAHNRLVMRPEQRRILMVISDGAPVDDSTLSVNHGSYLEKHLRQAIDWIETRSPVELVAIGIGHDVTRYYRRAVTIVDAEQLGGTVMEKLAELFDEEGPKRQAPYVPPPVPVVSGPAGTPRKPGYGLQAR

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
52 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
61 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
71 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
72 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
77 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
78 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
79 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
117 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
118 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
119 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
120 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
121 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
122 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
123 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
124 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
125 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
126 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
127 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
128 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
131 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
132 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
133 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
134 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
135 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
136 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
137 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
138 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
139 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
140 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
141 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
142 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
143 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
144 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
145 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
146 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
147 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
148 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
149 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
150 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
151 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
152 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
153 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
159 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
160 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
161 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
164 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
165 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
175 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
176 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
177 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
178 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
179 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
180 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
181 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
185 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
186 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
187 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
188 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
189 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
190 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
191 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
192 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
193 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
194 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
195 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
196 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
197 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
198 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
199 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
200 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
201 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
202 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
203 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
204 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
205 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
206 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
207 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
208 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
209 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
210 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
211 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
212 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
213 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
214 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
215 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
216 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
217 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.54
Metatranscriptomes 0.34
Isolates 6.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.86
Nodule 0
Rhizoplane 2.38
Rhizosphere 77.55
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10001313 3300001989 Bacteria 9327
2 JGI24737J22298_10002322 3300001990 Bacteria 6780
3 JGI24735J21928_10002476 3300002067 Bacteria 6411
4 JGI24735J21928_10006363 3300002067 Bacteria 3894
5 JGI25151J46595_10000285 3300003187 Bacteria 57259
6 JGI25153J46596_10000024 3300003215 Bacteria 238285
7 JGI25160J50197_1005608 3300003354 Bacteria 5199
8 Ga0065712_10068456 3300005290 Bacteria 10541
9 Ga0070658_10041092 3300005327 Bacteria 3731
10 Ga0070676_10004906 3300005328 Bacteria 7088
11 Ga0070670_100000014 3300005331 Bacteria 234648
12 Ga0070670_100002608 3300005331 Bacteria 14900
13 Ga0068869_100005934 3300005334 Bacteria 7719
14 Ga0070680_100045810 3300005336 Bacteria 3556
15 Ga0068868_100000201 3300005338 Bacteria 40113
16 Ga0070661_100008513 3300005344 Bacteria 7096
17 Ga0070692_10001970 3300005345 Bacteria 7779
18 Ga0070669_100096822 3300005353 Bacteria 2220
19 Ga0070675_100001714 3300005354 Bacteria 16191
20 Ga0070671_100002144 3300005355 Bacteria 15240
21 Ga0070671_100055758 3300005355 Bacteria 3288
22 Ga0070671_100101493 3300005355 Bacteria 2414
23 Ga0070674_100002427 3300005356 Bacteria 10303
24 Ga0070673_100000015 3300005364 Bacteria 118064
25 Ga0070673_100000809 3300005364 Bacteria 17505
26 Ga0070659_100052757 3300005366 Bacteria 3199
27 Ga0070667_100017955 3300005367 Bacteria 5865
28 Ga0070714_100029897 3300005435 Bacteria 4532
29 Ga0070713_100000842 3300005436 Bacteria 19632
30 Ga0070694_100047258 3300005444 Bacteria 2892
31 Ga0070681_10004353 3300005458 Bacteria 13464
32 Ga0070681_10013645 3300005458 Bacteria 8085
33 Ga0068867_100000236 3300005459 Bacteria 36247
34 Ga0070707_100028494 3300005468 Bacteria 5316
35 Ga0070698_100003527 3300005471 Bacteria 17215
36 Ga0070679_100019586 3300005530 Bacteria 6584
37 Ga0070679_100030412 3300005530 Bacteria 5331
38 Ga0068853_100050903 3300005539 Bacteria 3564
39 Ga0070672_100012775 3300005543 Bacteria 5911
40 Ga0070665_100011545 3300005548 Bacteria 8928
41 Ga0070665_100097409 3300005548 Bacteria 2946
42 Ga0068855_100005189 3300005563 Bacteria 15889
43 Ga0068854_100081850 3300005578 Bacteria 2385
44 Ga0068856_100138313 3300005614 Bacteria 2442
45 Ga0068859_100025761 3300005617 Bacteria 5899
46 Ga0068864_100000021 3300005618 Bacteria 262378
47 Ga0068864_100005950 3300005618 Bacteria 10006
48 Ga0068861_100011882 3300005719 Bacteria 6063
49 Ga0068863_100000009 3300005841 Bacteria 250538
50 Ga0068858_100002166 3300005842 Bacteria 19926
51 Ga0068858_100019373 3300005842 Bacteria 6363
52 Ga0068862_100000017 3300005844 Bacteria 247616
53 Ga0068862_100038379 3300005844 Bacteria 4062
54 Ga0081455_10027094 3300005937 Bacteria 5257
55 Ga0081455_10104860 3300005937 Bacteria 2261
56 Ga0081540_1012668 3300005983 Bacteria 5532
57 Ga0081540_1015141 3300005983 Bacteria 4894
58 Ga0081539_10001607 3300005985 Bacteria 37194
59 Ga0081539_10016367 3300005985 Bacteria 5302
60 Ga0081539_10042325 3300005985 Bacteria 2655
61 Ga0070717_10002226 3300006028 Bacteria 13612
62 Ga0075366_10017887 3300006195 Bacteria 4088
63 Ga0068865_100001212 3300006881 Bacteria 15028
64 Ga0097620_100025761 3300006931 Bacteria 5899
65 Ga0075435_100016513 3300007076 Bacteria 5566
66 Ga0099795_10005026 3300007788 Bacteria 3476
67 Ga0105251_10000079 3300009011 Bacteria 92478
68 Ga0111539_10001408 3300009094 Bacteria 32015
69 Ga0105245_10000502 3300009098 Bacteria 35879
70 Ga0105243_10000445 3300009148 Bacteria 43080
71 Ga0105242_10001769 3300009176 Bacteria 17037
72 Ga0105248_10000030 3300009177 Bacteria 206609
73 Ga0105248_10004882 3300009177 Bacteria 14819
74 Ga0105238_10009977 3300009551 Bacteria 9522
75 Ga0105249_10000625 3300009553 Bacteria 32214
76 Ga0105249_10076471 3300009553 Bacteria 3103
77 Ga0105033_100836 3300009986 Bacteria 2427
78 Ga0099796_10005128 3300010159 Bacteria 3242
79 Ga0105246_10006561 3300011119 Bacteria 7104
80 Ga0157370_10031697 3300013104 Bacteria 5169
81 Ga0157374_10034117 3300013296 Bacteria 4646
82 Ga0157378_10000394 3300013297 Bacteria 43079
83 Ga0163162_10030097 3300013306 Bacteria 5378
84 Ga0157380_10066012 3300014326 Bacteria 2910
85 Ga0157379_10109410 3300014968 Bacteria 2482
86 Ga0157376_10000078 3300014969 Bacteria 72879
87 Ga0213872_10001372 3300021361 Bacteria 16043
88 Ga0213872_10012359 3300021361 Bacteria 4018
89 Ga0213872_10021327 3300021361 Bacteria 2983
90 Ga0213875_10000911 3300021388 Bacteria 21434
91 Ga0213875_10001314 3300021388 Bacteria 16451
92 Ga0213875_10007416 3300021388 Bacteria 5665
93 Ga0209148_1001428 3300025254 Bacteria 12217
94 Ga0209455_1000586 3300025272 Bacteria 23638
95 Ga0209130_1000263 3300025284 Bacteria 65894
96 Ga0209676_1000256 3300025292 Bacteria 112819
97 Ga0209025_1000114 3300025294 Bacteria 218921
98 Ga0209758_1000256 3300025297 Bacteria 106339
99 Ga0209758_1012353 3300025297 Bacteria 4791
100 Ga0207426_1000181 3300025302 Bacteria 158308
101 Ga0209257_1000443 3300025304 Bacteria 78188
102 Ga0207697_10010416 3300025315 Bacteria 3974
103 Ga0207713_1001353 3300025735 Bacteria 19979
104 Ga0207692_10029815 3300025898 Bacteria 2596
105 Ga0207710_10014180 3300025900 Bacteria 3357
106 Ga0207647_10000604 3300025904 Bacteria 27991
107 Ga0207645_10003876 3300025907 Bacteria 11191
108 Ga0207705_10000005 3300025909 Bacteria 673478
109 Ga0207707_10005561 3300025912 Bacteria 11025
110 Ga0207707_10009949 3300025912 Bacteria 8246
111 Ga0207707_10033019 3300025912 Bacteria 4530
112 Ga0207693_10001738 3300025915 Bacteria 19113
113 Ga0207660_10029266 3300025917 Bacteria 3776
114 Ga0207660_10123933 3300025917 Bacteria 1960
115 Ga0207652_10025366 3300025921 Bacteria 4927
116 Ga0207652_10053962 3300025921 Bacteria 3454
117 Ga0207694_10012504 3300025924 Bacteria 6401
118 Ga0207650_10000095 3300025925 Bacteria 116052
119 Ga0207687_10004341 3300025927 Bacteria 9464
120 Ga0207664_10003312 3300025929 Bacteria 10715
121 Ga0207644_10058892 3300025931 Bacteria 2777
122 Ga0207690_10037623 3300025932 Bacteria 3143
123 Ga0207686_10000552 3300025934 Bacteria 24173
124 Ga0207709_10000118 3300025935 Bacteria 122125
125 Ga0207669_10011075 3300025937 Bacteria 4373
126 Ga0207704_10000027 3300025938 Bacteria 122372
127 Ga0207691_10019545 3300025940 Bacteria 6409
128 Ga0207711_10000029 3300025941 Bacteria 206826
129 Ga0207711_10004240 3300025941 Bacteria 12267
130 Ga0207689_10008321 3300025942 Bacteria 9037
131 Ga0207651_10000016 3300025960 Bacteria 122094
132 Ga0207651_10003443 3300025960 Bacteria 7775
133 Ga0207712_10000268 3300025961 Bacteria 50603
134 Ga0207712_10045828 3300025961 Bacteria 3029
135 Ga0207677_10000573 3300026023 Bacteria 22918
136 Ga0207703_10000938 3300026035 Bacteria 28262
137 Ga0207703_10006514 3300026035 Bacteria 9318
138 Ga0207702_10086372 3300026078 Bacteria 2736
139 Ga0207641_10000017 3300026088 Bacteria 299119
140 Ga0207648_10000482 3300026089 Bacteria 44351
141 Ga0207676_10000037 3300026095 Bacteria 180826
142 Ga0207676_10000172 3300026095 Bacteria 56627
143 Ga0207676_10059674 3300026095 Bacteria 3014
144 Ga0207675_100013284 3300026118 Bacteria 7688
145 Ga0207428_10000203 3300027907 Bacteria 82534
146 Ga0268266_10010005 3300028379 Bacteria 8324
147 Ga0268266_10031346 3300028379 Bacteria 4514
148 Ga0268265_10000025 3300028380 Bacteria 250207
149 Ga0268265_10007805 3300028380 Bacteria 7223
150 Ga0265337_1001728 3300028556 Bacteria 10559
151 Ga0265334_10012158 3300028573 Bacteria 3616
152 Ga0265320_10002022 3300031240 Bacteria 14313
153 Ga0265327_10000441 3300031251 Bacteria 75419
154 Ga0265327_10002248 3300031251 Bacteria 20917
155 Ga0265327_10002963 3300031251 Bacteria 16944
156 Ga0265316_10024118 3300031344 Bacteria 5106
157 Ga0265313_10000198 3300031595 Bacteria 64711
158 Ga0265313_10010753 3300031595 Bacteria 5752
159 Ga0316593_10013689 3300032168 Bacteria 2407
160 Ga0307510_10003958 3300033180 Bacteria 17370
161 Ga0373934_0003850 3300035086 Bacteria 5520
162 Ga0373936_0001850 3300035113 Bacteria 7797
163 Ga0373954_0006226 3300035118 Bacteria 5203
164 Ga0373931_0027836 3300035691 Bacteria 2888
165 Ga0373947_0015615 3300035725 Bacteria 4363
166 Ga0373947_0059127 3300035725 Bacteria 2323
167 Ga0373937_0003123 3300036401 Bacteria 13860
168 Ga0373937_0009063 3300036401 Bacteria 8636
169 Ga0373925_0089632 3300037068 Bacteria 2350
170 Ga0395899_0005942 3300037312 Bacteria 9478
171 Ga0395900_0003218 3300037418 Bacteria 17681
172 Ga0395900_0106719 3300037418 Bacteria 2877
173 Ga0395898_0006332 3300037466 Bacteria 12649
174 Ga0436364_0259249 3300037853 Bacteria 81192
175 Ga0436364_0271401 3300037853 Bacteria 70772
176 Ga0436364_0642257 3300037853 Bacteria 36643
177 Ga0436364_0831545 3300037853 Bacteria 29809
178 Ga0395901_0045862 3300038443 Bacteria 4538
179 Ga0436365_1746353 3300039437 Bacteria 5165
180 Ga0436365_1898874 3300039437 Bacteria 1952
181 Ga0436360_0554306 3300039438 Bacteria 3497
182 Ga0436360_1184266 3300039438 Bacteria 3498
183 Ga0436360_1203410 3300039438 Bacteria 10729
184 Ga0436361_0090835 3300039447 Bacteria 2594
185 Ga0436361_0201485 3300039447 Bacteria 12055
186 Ga0436361_0429880 3300039447 Bacteria 88899
187 Ga0436361_0431198 3300039447 Bacteria 2486
188 Ga0436361_1102690 3300039447 Bacteria 2919
189 Ga0436363_1128897 3300039450 Bacteria 1795
190 Ga0436362_0729034 3300039453 Bacteria 4466
191 Ga0451806_492325 3300041462 Bacteria 2605
192 Ga0439431_0007877 3300041997 Bacteria 2382
193 Ga0451577_0017922 3300042876 Bacteria 6534
194 Ga0451577_0079004 3300042876 Bacteria 2933
195 Ga0453683_0035240 3300044673 Bacteria 3154
196 Ga0453684_0000015 3300044712 Bacteria 969198
197 Ga0453684_0000020 3300044712 Bacteria 879938
198 Ga0453684_0051254 3300044712 Bacteria 5415
199 Ga0466970_0080261 3300044765 Bacteria 1763
200 Ga0466957_0021989 3300044842 Bacteria 3761
201 Ga0451576_0000236 3300045051 Bacteria 135064
202 Ga0451576_0000647 3300045051 Bacteria 71894
203 Ga0451576_0091339 3300045051 Bacteria 3167
204 Ga0466967_0108249 3300045976 Bacteria 2550
205 Ga0495648_0038367 3300046524 Bacteria 3065
206 Ga0495625_0018187 3300046660 Bacteria 5492
207 Ga0495669_0003892 3300046684 Bacteria 6142
208 Ga0495686_0000134 3300047472 Bacteria 149997
209 Ga0496109_0035158 3300048912 Bacteria 4518
210 Ga0496110_0013790 3300048913 Bacteria 6695
211 Ga0496111_0009671 3300048914 Bacteria 6444
212 Ga0496112_0010624 3300048915 Bacteria 8362
213 Ga0496113_0073050 3300048916 Bacteria 2612
214 Ga0496118_0000216 3300048921 Bacteria 100502
215 Ga0496118_0025209 3300048921 Bacteria 5107
216 Ga0496119_0008646 3300048922 Bacteria 8911
217 Ga0496120_0018135 3300048923 Bacteria 4544
218 Ga0496121_0002197 3300048924 Bacteria 30505
219 Ga0496121_0041381 3300048924 Bacteria 4027
220 Ga0496125_0021169 3300048928 Bacteria 6076
221 Ga0496126_0153918 3300048929 Bacteria 1969
222 Ga0501032_0000011 3300049569 Bacteria 198158
223 Ga0501032_0002462 3300049569 Bacteria 14467
224 Ga0501032_0057572 3300049569 Bacteria 2611
225 Ga0501033_0001674 3300049570 Bacteria 19374
226 Ga0501034_0000001 3300049571 Bacteria 2184493
227 Ga0501034_0222471 3300049571 Bacteria 1839
228 Ga0501036_0034956 3300049572 Bacteria 4251
229 Ga0501037_0008111 3300049573 Bacteria 7697
230 Ga0501038_0049080 3300049574 Bacteria 3650
231 Ga0501038_0130708 3300049574 Bacteria 2062
232 Ga0501039_0000034 3300049575 Bacteria 126569
233 Ga0501039_0051607 3300049575 Bacteria 3182
234 Ga0501043_0001723 3300049579 Bacteria 18917
235 Ga0501043_0027281 3300049579 Bacteria 4484
236 Ga0501047_0003426 3300049581 Bacteria 14995
237 Ga0501047_0011015 3300049581 Bacteria 8556
238 Ga0501047_0146788 3300049581 Bacteria 2235
239 Ga0501067_0001067 3300049583 Bacteria 14783
240 Ga0501068_0006750 3300049584 Bacteria 6341
241 Ga0501068_0018333 3300049584 Bacteria 4054
242 Ga0501069_0002064 3300049585 Bacteria 10098
243 Ga0501073_0000011 3300049589 Bacteria 161823
244 Ga0501073_0004513 3300049589 Bacteria 10462
245 Ga0501073_0039249 3300049589 Bacteria 3354
246 Ga0501077_0000117 3300049593 Bacteria 42369
247 Ga0501080_0003446 3300049742 Bacteria 13960
248 Ga0501080_0097686 3300049742 Bacteria 2727
249 Ga0501083_0020858 3300049744 Bacteria 4554
250 Ga0501083_0031026 3300049744 Bacteria 3668
251 Ga0501035_0017209 3300049822 Bacteria 6663
252 Ga0501044_0000529 3300049823 Bacteria 46432
253 Ga0501044_0019457 3300049823 Bacteria 7263
254 Ga0501044_0093820 3300049823 Bacteria 3026
255 nmdc:mga08y16_5545_c1 3300050511 Bacteria 13216
256 nmdc:mga08y16_95790_c1 3300050511 Bacteria 3091
257 nmdc:mga0sz30_175_c1 3300050516 Bacteria 23966
258 Ga0495601_0068040 3300053077 Bacteria 2269
259 Ga0495595_0017866 3300053084 Bacteria 3056
260 Ga0500643_005786 3300053087 Bacteria 5276
261 Ga0500644_0025357 3300053088 Bacteria 1823
262 Ga0500651_0018697 3300053093 Bacteria 4293
263 Ga0500555_000925 3300053103 Bacteria 10283
264 Ga0500556_0003115 3300053104 Bacteria 4948
265 Ga0500595_003983 3300053119 Bacteria 6750
266 Ga0500595_004923 3300053119 Bacteria 5903
267 Ga0500595_009213 3300053119 Bacteria 3994
268 Ga0500608_012651 3300053122 Bacteria 3708
269 Ga0500642_0000001 3300053130 Bacteria 1468402
270 Ga0500642_0004970 3300053130 Bacteria 4234
271 Ga0500642_0015224 3300053130 Bacteria 2885
272 Ga0500568_0018816 3300053139 Bacteria 3012
273 Ga0500616_0010622 3300053153 Bacteria 5495
274 Ga0500645_000362 3300053730 Bacteria 32311
275 Ga0590077_003224 3300059426 Bacteria 3396
276 Ga0501082_0009761 3300060353 Bacteria 8269
277 2524611639 2524023250 Bacteria 5457705
278 2512034693 2511231221 Bacteria 6846400
279 2523104288 2522572158 Bacteria 6514390
280 2599105167 2597490356 Bacteria 7030811
281 2600228272 2599185359 Bacteria 4772316
282 2821450524 2821443989 Bacteria 7658172
283 2830079103 2830075706 Bacteria 3855215
284 2842778889 2842775625 Bacteria 5587290
285 2844536067 2844533157 Bacteria 7517899
286 2846955156 2846952575 Bacteria 6587527
287 2848858550 2848858292 Bacteria 7391279
288 2883580892 2883577096 Bacteria 4709178
289 2885431301 2885429604 Bacteria 3642894
290 2897803912 2897803580 Bacteria 7000062
291 2917554414 2917554339 Bacteria 4987857
292 2929204715 2929199973 Bacteria 7260745
293 2939674499 2939669807 Bacteria 5028511
294 8054003858 8054002106 Bacteria 7987183
295 JGI24739J22299_10001313
296 JGI24737J22298_10002322
297 JGI24735J21928_10002476
298 JGI24735J21928_10006363
299 JGI25151J46595_10000285
300 JGI25153J46596_10000024
301 JGI25160J50197_1005608
302 Ga0065712_10068456
303 Ga0070658_10041092
304 Ga0070676_10004906
305 Ga0070670_100000014
306 Ga0070670_100002608
307 Ga0068869_100005934
308 Ga0070680_100045810
309 Ga0068868_100000201
310 Ga0070661_100008513
311 Ga0070692_10001970
312 Ga0070669_100096822
313 Ga0070675_100001714
314 Ga0070671_100002144
315 Ga0070671_100055758
316 Ga0070671_100101493
317 Ga0070674_100002427
318 Ga0070673_100000015
319 Ga0070673_100000809
320 Ga0070659_100052757
321 Ga0070667_100017955
322 Ga0070714_100029897
323 Ga0070713_100000842
324 Ga0070694_100047258
325 Ga0070681_10004353
326 Ga0070681_10013645
327 Ga0068867_100000236
328 Ga0070707_100028494
329 Ga0070698_100003527
330 Ga0070679_100019586
331 Ga0070679_100030412
332 Ga0068853_100050903
333 Ga0070672_100012775
334 Ga0070665_100011545
335 Ga0070665_100097409
336 Ga0068855_100005189
337 Ga0068854_100081850
338 Ga0068856_100138313
339 Ga0068859_100025761
340 Ga0068864_100000021
341 Ga0068864_100005950
342 Ga0068861_100011882
343 Ga0068863_100000009
344 Ga0068858_100002166
345 Ga0068858_100019373
346 Ga0068862_100000017
347 Ga0068862_100038379
348 Ga0081455_10027094
349 Ga0081455_10104860
350 Ga0081540_1012668
351 Ga0081540_1015141
352 Ga0081539_10001607
353 Ga0081539_10016367
354 Ga0081539_10042325
355 Ga0070717_10002226
356 Ga0075366_10017887
357 Ga0068865_100001212
358 Ga0097620_100025761
359 Ga0075435_100016513
360 Ga0099795_10005026
361 Ga0105251_10000079
362 Ga0111539_10001408
363 Ga0105245_10000502
364 Ga0105243_10000445
365 Ga0105242_10001769
366 Ga0105248_10000030
367 Ga0105248_10004882
368 Ga0105238_10009977
369 Ga0105249_10000625
370 Ga0105249_10076471
371 Ga0105033_100836
372 Ga0099796_10005128
373 Ga0105246_10006561
374 Ga0157370_10031697
375 Ga0157374_10034117
376 Ga0157378_10000394
377 Ga0163162_10030097
378 Ga0157380_10066012
379 Ga0157379_10109410
380 Ga0157376_10000078
381 Ga0213872_10001372
382 Ga0213872_10012359
383 Ga0213872_10021327
384 Ga0213875_10000911
385 Ga0213875_10001314
386 Ga0213875_10007416
387 Ga0209148_1001428
388 Ga0209455_1000586
389 Ga0209130_1000263
390 Ga0209676_1000256
391 Ga0209025_1000114
392 Ga0209758_1000256
393 Ga0209758_1012353
394 Ga0207426_1000181
395 Ga0209257_1000443
396 Ga0207697_10010416
397 Ga0207713_1001353
398 Ga0207692_10029815
399 Ga0207710_10014180
400 Ga0207647_10000604
401 Ga0207645_10003876
402 Ga0207705_10000005
403 Ga0207707_10005561
404 Ga0207707_10009949
405 Ga0207707_10033019
406 Ga0207693_10001738
407 Ga0207660_10029266
408 Ga0207660_10123933
409 Ga0207652_10025366
410 Ga0207652_10053962
411 Ga0207694_10012504
412 Ga0207650_10000095
413 Ga0207687_10004341
414 Ga0207664_10003312
415 Ga0207644_10058892
416 Ga0207690_10037623
417 Ga0207686_10000552
418 Ga0207709_10000118
419 Ga0207669_10011075
420 Ga0207704_10000027
421 Ga0207691_10019545
422 Ga0207711_10000029
423 Ga0207711_10004240
424 Ga0207689_10008321
425 Ga0207651_10000016
426 Ga0207651_10003443
427 Ga0207712_10000268
428 Ga0207712_10045828
429 Ga0207677_10000573
430 Ga0207703_10000938
431 Ga0207703_10006514
432 Ga0207702_10086372
433 Ga0207641_10000017
434 Ga0207648_10000482
435 Ga0207676_10000037
436 Ga0207676_10000172
437 Ga0207676_10059674
438 Ga0207675_100013284
439 Ga0207428_10000203
440 Ga0268266_10010005
441 Ga0268266_10031346
442 Ga0268265_10000025
443 Ga0268265_10007805
444 Ga0265337_1001728
445 Ga0265334_10012158
446 Ga0265320_10002022
447 Ga0265327_10000441
448 Ga0265327_10002248
449 Ga0265327_10002963
450 Ga0265316_10024118
451 Ga0265313_10000198
452 Ga0265313_10010753
453 Ga0316593_10013689
454 Ga0307510_10003958
455 Ga0373934_0003850
456 Ga0373936_0001850
457 Ga0373954_0006226
458 Ga0373931_0027836
459 Ga0373947_0015615
460 Ga0373947_0059127
461 Ga0373937_0003123
462 Ga0373937_0009063
463 Ga0373925_0089632
464 Ga0395899_0005942
465 Ga0395900_0003218
466 Ga0395900_0106719
467 Ga0395898_0006332
468 Ga0436364_0259249
469 Ga0436364_0271401
470 Ga0436364_0642257
471 Ga0436364_0831545
472 Ga0395901_0045862
473 Ga0436365_1746353
474 Ga0436365_1898874
475 Ga0436360_0554306
476 Ga0436360_1184266
477 Ga0436360_1203410
478 Ga0436361_0090835
479 Ga0436361_0201485
480 Ga0436361_0429880
481 Ga0436361_0431198
482 Ga0436361_1102690
483 Ga0436363_1128897
484 Ga0436362_0729034
485 Ga0451806_492325
486 Ga0439431_0007877
487 Ga0451577_0017922
488 Ga0451577_0079004
489 Ga0453683_0035240
490 Ga0453684_0000015
491 Ga0453684_0000020
492 Ga0453684_0051254
493 Ga0466970_0080261
494 Ga0466957_0021989
495 Ga0451576_0000236
496 Ga0451576_0000647
497 Ga0451576_0091339
498 Ga0466967_0108249
499 Ga0495648_0038367
500 Ga0495625_0018187
501 Ga0495669_0003892
502 Ga0495686_0000134
503 Ga0496109_0035158
504 Ga0496110_0013790
505 Ga0496111_0009671
506 Ga0496112_0010624
507 Ga0496113_0073050
508 Ga0496118_0000216
509 Ga0496118_0025209
510 Ga0496119_0008646
511 Ga0496120_0018135
512 Ga0496121_0002197
513 Ga0496121_0041381
514 Ga0496125_0021169
515 Ga0496126_0153918
516 Ga0501032_0000011
517 Ga0501032_0002462
518 Ga0501032_0057572
519 Ga0501033_0001674
520 Ga0501034_0000001
521 Ga0501034_0222471
522 Ga0501036_0034956
523 Ga0501037_0008111
524 Ga0501038_0049080
525 Ga0501038_0130708
526 Ga0501039_0000034
527 Ga0501039_0051607
528 Ga0501043_0001723
529 Ga0501043_0027281
530 Ga0501047_0003426
531 Ga0501047_0011015
532 Ga0501047_0146788
533 Ga0501067_0001067
534 Ga0501068_0006750
535 Ga0501068_0018333
536 Ga0501069_0002064
537 Ga0501073_0000011
538 Ga0501073_0004513
539 Ga0501073_0039249
540 Ga0501077_0000117
541 Ga0501080_0003446
542 Ga0501080_0097686
543 Ga0501083_0020858
544 Ga0501083_0031026
545 Ga0501035_0017209
546 Ga0501044_0000529
547 Ga0501044_0019457
548 Ga0501044_0093820
549 nmdc:mga08y16_5545_c1
550 nmdc:mga08y16_95790_c1
551 nmdc:mga0sz30_175_c1
552 Ga0495601_0068040
553 Ga0495595_0017866
554 Ga0500643_005786
555 Ga0500644_0025357
556 Ga0500651_0018697
557 Ga0500555_000925
558 Ga0500556_0003115
559 Ga0500595_003983
560 Ga0500595_004923
561 Ga0500595_009213
562 Ga0500608_012651
563 Ga0500642_0000001
564 Ga0500642_0004970
565 Ga0500642_0015224
566 Ga0500568_0018816
567 Ga0500616_0010622
568 Ga0500645_000362
569 Ga0590077_003224
570 Ga0501082_0009761
571 2524611639
572 2512034693
573 2523104288
574 2599105167
575 2600228272
576 2821450524
577 2830079103
578 2842778889
579 2844536067
580 2846955156
581 2848858550
582 2883580892
583 2885431301
584 2897803912
585 2917554414
586 2929204715
587 2939674499
588 8054003858

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11775

CobT_C

Cobalamin biosynthesis protein CobT VWA domain

389

607

0.99

PF06213

CobT

Cobalamin biosynthesis protein CobT

1

282

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7n1o-assembly1.cif.gz_A the von willebrand factor a domain of human capillary morphogenesis gene ii, flexibly fused to the 1tel crystallization chaperone 0.7088 328 532
8ft6-assembly1.cif.gz_A the von willebrand factor a domain of human capillary morphogenesis gene ii, flexibly fused to the 1tel crystallization chaperone, ala-ala linker variant, sumo tag-free preparation. 0.7068 330 532
8fz4-assembly2.cif.gz_B the von willebrand factor a domain of anthrax toxin receptor 2 0.7035 326 533
4okr-assembly2.cif.gz_B structures of toxoplasma gondii mic2 0.6911 327 531
8fz4-assembly2.cif.gz_B the von willebrand factor a domain of anthrax toxin receptor 2 0.69 326 533
ID Description Score Start End Superfamily
af_Q2G2J9_431_609_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.7871 327 514 3.40.50.410
af_Q2G2J9_431_609_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.7633 327 514 3.40.50.410
af_A0A0R4IGD8_95_248_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.7313 326 501 3.40.50.410
af_A0A2I3BPJ2_67_249_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.7164 330 533 3.40.50.410
af_A6NF34_69_249_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.7039 327 530 3.40.50.410
ID Description Score Start End GO Terms
AF-A0A1B6NPT3-F1-model_v4 Cobalt chelatase, CobT subunit 0.9721 32 115 GO:0009236
AF-A0A436LMH0-F1-model_v4 deleted 0.9697 6 195
AF-A0A2R7K061-F1-model_v4 Cobaltochelatase subunit CobT 0.9666 1 70 GO:0009236
AF-A0A3D2E4Z4-F1-model_v4 deleted 0.9652 1 119
AF-A0A520JNY4-F1-model_v4 Cobaltochelatase subunit CobT 0.9646 1 131 GO:0009236

Map