F391954

General Info

Members Datasets Scaffolds Average Seq Length
294 202 284 448

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100062402|Ga0070706_1000624023
Length 522
Sequence MQVTETIAEGLKREFRVVVPAVELEEKVTSRLGEIGRTANLPGFRPGKVPIQILRRRFGPSVLGEVLESTVQGSSAEAIREHNLRPALPPKVDIVSFSEGNDLEYKMSLELLPEIPELRFADLDIERLVVEVPDEDIDRAVERIAEQQRKSEVVERPAENGDIIVVDVEGRVDDREIPGASGKDRQIALGSGNFIPGFEDQLIGATAGEHRTVRVTFPDDYGVPDFSGKEAVFAVDVKEVRNRLPVVIDDELGKAVGLETLAELRDEVRQQMQRDYDAASRLRLKRALLDRLAEAYDFPVPPGMVDLEFENIWRQYQTEKERESAAQSDAAASDPQVDAAEPGLATETAGDVATEGGSAQAAANQTEPPPETTAGVHLDQMAGPDPQAAADAAQAVEVPPVTDEASKAEYRRIAERRVRLGLLLAEVGRGNNITVTQEELNQAITREARRHPGYERQVLEFYRQNPEAVGNLRAPIFEDKVIDFIVELAKVEERKITPKELLSTPDPDEEETLAASGSTGAT

Samples

Sample ID Description Type Environment
1 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
2 2643221580 Devosia sp. Root635 Isolate Unclassified
3 2643221591 Devosia sp. Root685 Isolate Unclassified
4 2643221629 Devosia sp. Root105 Isolate Unclassified
5 2643221662 Devosia sp. Root413D1 Isolate Unclassified
6 2643221674 Devosia sp. Root436 Isolate Unclassified
7 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
8 2842694124 Methylopila sp. R-72369 Isolate Unclassified
9 2932401849 Devosia sp. 2618 Isolate Rhizosphere
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
46 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
47 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
48 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
49 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
50 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
71 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
106 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
107 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
108 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
109 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
110 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
111 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
112 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
113 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
114 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
115 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
116 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
117 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
118 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
119 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
120 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
121 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
122 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
123 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
124 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
125 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
126 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
127 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
128 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
129 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
130 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
131 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
132 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
133 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
134 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
135 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
136 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
137 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
138 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
139 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
140 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
141 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
142 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
143 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
144 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
145 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
152 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
161 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
162 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
165 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
171 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
172 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
173 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
174 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
175 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
176 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
177 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
178 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
179 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
182 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
183 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
184 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
185 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
186 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
187 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
188 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
189 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
190 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
191 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
192 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
193 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
194 3300059623 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 66R_SW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
195 3300059624 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 146R_CW_T3_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
196 3300059626 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 173R_CD_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
197 3300059639 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
198 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
199 3300059652 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 72R_SD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
200 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
201 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
202 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.52
Metatranscriptomes 4.08
Isolates 3.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.12
Nodule 0.34
Rhizoplane 0.68
Rhizosphere 81.97
Stem 0
Stem Tuber 0
Unclassified 10.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10030232 3300003320 Bacteria 5941
2 Ga0070658_10027391 3300005327 Bacteria 4573
3 Ga0070658_10091054 3300005327 Bacteria 2513
4 Ga0070680_100000110 3300005336 Bacteria 47139
5 Ga0070660_100007572 3300005339 Bacteria 7567
6 Ga0070691_10010527 3300005341 Bacteria 4222
7 Ga0070691_10011113 3300005341 Bacteria 4109
8 Ga0070691_10022103 3300005341 Bacteria 2949
9 Ga0070661_100002238 3300005344 Bacteria 13273
10 Ga0070669_100011692 3300005353 Bacteria 6227
11 Ga0070671_100023508 3300005355 Bacteria 5044
12 Ga0070674_100004336 3300005356 Bacteria 8086
13 Ga0070659_100019552 3300005366 Bacteria 5135
14 Ga0070709_10129597 3300005434 Bacteria 1720
15 Ga0070714_100018938 3300005435 Bacteria 5600
16 Ga0070710_10001488 3300005437 Bacteria 11021
17 Ga0070711_100024946 3300005439 Bacteria 3908
18 Ga0070700_100027451 3300005441 Bacteria 3375
19 Ga0070694_100056711 3300005444 Bacteria 2661
20 Ga0070663_100041298 3300005455 Bacteria 3234
21 Ga0070681_10025916 3300005458 Bacteria 5895
22 Ga0070706_100033492 3300005467 Bacteria 4742
23 Ga0070706_100062402 3300005467 Bacteria 3444
24 Ga0070707_100319156 3300005468 Bacteria 1510
25 Ga0070698_100002489 3300005471 Bacteria 20297
26 Ga0070699_100177790 3300005518 Bacteria 1888
27 Ga0070679_100023162 3300005530 Bacteria 6076
28 Ga0070679_100167695 3300005530 Bacteria 2169
29 Ga0070697_100211279 3300005536 Bacteria 1652
30 Ga0070697_100223614 3300005536 Bacteria 1604
31 Ga0068853_100002602 3300005539 Bacteria 13568
32 Ga0068853_100263562 3300005539 Bacteria 1585
33 Ga0070695_100005234 3300005545 Bacteria 7649
34 Ga0070695_100166371 3300005545 Bacteria 1552
35 Ga0070696_100106501 3300005546 Bacteria 2015
36 Ga0070665_100025414 3300005548 Bacteria 5968
37 Ga0070665_100200178 3300005548 Bacteria 1998
38 Ga0068855_100000111 3300005563 Bacteria 102282
39 Ga0068855_100024301 3300005563 Bacteria 7254
40 Ga0068855_100028699 3300005563 Bacteria 6658
41 Ga0068855_100110535 3300005563 Bacteria 3155
42 Ga0068857_100000605 3300005577 Bacteria 26414
43 Ga0068856_100001640 3300005614 Bacteria 23457
44 Ga0068852_100097205 3300005616 Bacteria 2648
45 Ga0068866_10021586 3300005718 Bacteria 2968
46 Ga0068861_100050723 3300005719 Bacteria 3147
47 Ga0081455_10001025 3300005937 Bacteria 35218
48 Ga0081455_10030605 3300005937 Bacteria 4887
49 Ga0081538_10000854 3300005981 Bacteria 32885
50 Ga0081540_1000205 3300005983 Bacteria 61689
51 Ga0070717_10000258 3300006028 Bacteria 36170
52 Ga0070717_10089767 3300006028 Bacteria 2593
53 Ga0075363_100014398 3300006048 Bacteria 3863
54 Ga0075364_10068587 3300006051 Bacteria 2332
55 Ga0075366_10032810 3300006195 Bacteria 3057
56 Ga0075366_10055396 3300006195 Bacteria 2355
57 Ga0075430_100070818 3300006846 Bacteria 2925
58 Ga0075431_100040716 3300006847 Bacteria 4788
59 Ga0075434_100078659 3300006871 Bacteria 3293
60 Ga0075434_100284538 3300006871 Bacteria 1673
61 Ga0075429_100035924 3300006880 Bacteria 4309
62 Ga0068865_100062398 3300006881 Bacteria 2616
63 Ga0105240_10000122 3300009093 Bacteria 162728
64 Ga0105240_10098559 3300009093 Bacteria 3559
65 Ga0111539_10000445 3300009094 Bacteria 52233
66 Ga0105242_10043035 3300009176 Bacteria 3651
67 Ga0105248_10000005 3300009177 Bacteria 673111
68 Ga0105237_10004738 3300009545 Bacteria 15644
69 Ga0105237_10011815 3300009545 Bacteria 9236
70 Ga0105238_10003077 3300009551 Bacteria 16636
71 Ga0105238_10023495 3300009551 Bacteria 6283
72 Ga0105238_10027906 3300009551 Bacteria 5753
73 Ga0105239_10001240 3300010375 Bacteria 34755
74 Ga0105239_10001582 3300010375 Bacteria 30053
75 Ga0105239_10002091 3300010375 Bacteria 25893
76 Ga0105239_10019729 3300010375 Bacteria 7440
77 Ga0105239_10027585 3300010375 Bacteria 6250
78 Ga0157373_10030921 3300013100 Bacteria 3853
79 Ga0157370_10004736 3300013104 Bacteria 15511
80 Ga0157370_10114749 3300013104 Bacteria 2516
81 Ga0157369_10002084 3300013105 Bacteria 24180
82 Ga0157369_10004064 3300013105 Bacteria 17329
83 Ga0157369_10008046 3300013105 Bacteria 12092
84 Ga0157369_10155076 3300013105 Bacteria 2419
85 Ga0157369_10256544 3300013105 Bacteria 1824
86 Ga0157372_10006651 3300013307 Bacteria 12303
87 Ga0157379_10021167 3300014968 Bacteria 5755
88 Ga0157379_10062917 3300014968 Bacteria 3317
89 Ga0157379_10187135 3300014968 Bacteria 1871
90 Ga0213872_10024355 3300021361 Bacteria 2784
91 Ga0213876_10000201 3300021384 Bacteria 61091
92 Ga0213875_10000673 3300021388 Bacteria 26870
93 Ga0213875_10001472 3300021388 Bacteria 15207
94 Ga0213875_10002765 3300021388 Bacteria 10357
95 Ga0213875_10015392 3300021388 Bacteria 3723
96 Ga0207642_10017369 3300025899 Bacteria 2735
97 Ga0207699_10034826 3300025906 Bacteria 2860
98 Ga0207699_10044108 3300025906 Bacteria 2594
99 Ga0207705_10000954 3300025909 Bacteria 23637
100 Ga0207705_10003317 3300025909 Bacteria 12242
101 Ga0207684_10112718 3300025910 Bacteria 2328
102 Ga0207707_10006557 3300025912 Bacteria 10158
103 Ga0207707_10036624 3300025912 Bacteria 4289
104 Ga0207695_10000173 3300025913 Bacteria 189050
105 Ga0207695_10039786 3300025913 Bacteria 5050
106 Ga0207671_10003123 3300025914 Bacteria 16824
107 Ga0207671_10123717 3300025914 Bacteria 1979
108 Ga0207671_10183873 3300025914 Bacteria 1628
109 Ga0207693_10000965 3300025915 Bacteria 25813
110 Ga0207693_10035247 3300025915 Bacteria 3945
111 Ga0207663_10033081 3300025916 Bacteria 3076
112 Ga0207660_10042770 3300025917 Bacteria 3181
113 Ga0207657_10000951 3300025919 Bacteria 30704
114 Ga0207657_10003633 3300025919 Bacteria 16422
115 Ga0207649_10000077 3300025920 Bacteria 83350
116 Ga0207652_10017179 3300025921 Bacteria 5918
117 Ga0207652_10089100 3300025921 Bacteria 2709
118 Ga0207652_10090168 3300025921 Bacteria 2693
119 Ga0207681_10003995 3300025923 Bacteria 9153
120 Ga0207694_10000005 3300025924 Bacteria 823704
121 Ga0207694_10056715 3300025924 Bacteria 3043
122 Ga0207694_10093399 3300025924 Bacteria 2376
123 Ga0207664_10131639 3300025929 Bacteria 2106
124 Ga0207644_10006666 3300025931 Bacteria 7525
125 Ga0207686_10024758 3300025934 Bacteria 3483
126 Ga0207669_10015427 3300025937 Bacteria 3852
127 Ga0207665_10024538 3300025939 Bacteria 3976
128 Ga0207711_10000002 3300025941 Bacteria 1228676
129 Ga0207689_10060743 3300025942 Bacteria 3108
130 Ga0207667_10000011 3300025949 Bacteria 447785
131 Ga0207667_10014415 3300025949 Bacteria 9016
132 Ga0207667_10027676 3300025949 Bacteria 6166
133 Ga0207667_10133535 3300025949 Bacteria 2556
134 Ga0207668_10046486 3300025972 Bacteria 2966
135 Ga0207639_10032753 3300026041 Bacteria 3829
136 Ga0207639_10164540 3300026041 Bacteria 1872
137 Ga0207639_10214650 3300026041 Bacteria 1658
138 Ga0207678_10020753 3300026067 Bacteria 5759
139 Ga0207708_10082878 3300026075 Bacteria 2465
140 Ga0207702_10002298 3300026078 Bacteria 18309
141 Ga0207674_10000330 3300026116 Bacteria 60515
142 Ga0207698_10015262 3300026142 Bacteria 5141
143 Ga0207698_10156135 3300026142 Bacteria 1988
144 Ga0207698_10197160 3300026142 Bacteria 1800
145 Ga0209974_10015450 3300027876 Bacteria 2535
146 Ga0207428_10000242 3300027907 Bacteria 74839
147 Ga0268266_10000265 3300028379 Bacteria 87871
148 Ga0268265_10074451 3300028380 Bacteria 2656
149 Ga0265318_10000015 3300028577 Bacteria 187234
150 Ga0265338_10000005 3300028800 Bacteria 571137
151 Ga0265338_10038536 3300028800 Bacteria 4526
152 Ga0265325_10000005 3300031241 Bacteria 321343
153 Ga0265339_10003263 3300031249 Bacteria 11359
154 Ga0265331_10000003 3300031250 Bacteria 499358
155 Ga0265331_10001097 3300031250 Bacteria 20842
156 Ga0265331_10002006 3300031250 Bacteria 14162
157 Ga0265327_10000187 3300031251 Bacteria 131135
158 Ga0307513_10000261 3300031456 Bacteria 76045
159 Ga0307513_10013311 3300031456 Bacteria 10101
160 Ga0265313_10001803 3300031595 Bacteria 19581
161 Ga0265313_10004848 3300031595 Bacteria 10112
162 Ga0265314_10004226 3300031711 Bacteria 13464
163 Ga0265314_10028976 3300031711 Bacteria 4120
164 Ga0316576_10086835 3300031727 Bacteria 2327
165 Ga0307516_10078615 3300031730 Bacteria 3145
166 Ga0307410_10090715 3300031852 Bacteria 2168
167 Ga0307409_100006223 3300031995 Bacteria 6989
168 Ga0373923_0043627 3300035111 Bacteria 1857
169 Ga0373939_0009993 3300035114 Bacteria 2362
170 Ga0373953_0004482 3300035117 Bacteria 4456
171 Ga0373955_0023810 3300035172 Bacteria 3124
172 Ga0373962_0002784 3300035242 Bacteria 4170
173 Ga0373931_0086307 3300035691 Bacteria 1741
174 Ga0373933_0024182 3300035724 Bacteria 3477
175 Ga0373947_0090425 3300035725 Bacteria 1908
176 Ga0373937_0049240 3300036401 Bacteria 3859
177 Ga0373937_0142325 3300036401 Bacteria 2244
178 Ga0373937_0212568 3300036401 Bacteria 1820
179 Ga0316584_0004750 3300036712 Bacteria 9009
180 Ga0316584_0015826 3300036712 Bacteria 5401
181 Ga0395899_0020901 3300037312 Bacteria 4964
182 Ga0395900_0012113 3300037418 Bacteria 8811
183 Ga0395900_0037301 3300037418 Bacteria 5012
184 Ga0395898_0029741 3300037466 Bacteria 5467
185 Ga0436364_0169648 3300037853 Bacteria 67675
186 Ga0436364_0630944 3300037853 Bacteria 60832
187 Ga0436364_0692364 3300037853 Bacteria 1485
188 Ga0436364_0723260 3300037853 Bacteria 46751
189 Ga0436364_1081327 3300037853 Bacteria 4550
190 Ga0395901_0012064 3300038443 Bacteria 8767
191 Ga0400486_00284 3300038742 Bacteria 1617
192 Ga0436365_0004708 3300039437 Bacteria 4588
193 Ga0436365_1073490 3300039437 Bacteria 73987
194 Ga0436360_0447311 3300039438 Bacteria 2041
195 Ga0436361_0004694 3300039447 Bacteria 6163
196 Ga0436361_0692362 3300039447 Bacteria 2158
197 Ga0436361_0958487 3300039447 Bacteria 12806
198 Ga0436363_0638174 3300039450 Bacteria 2415
199 Ga0436363_1150390 3300039450 Bacteria 5572
200 Ga0451797_0693308 3300041453 Bacteria 2007
201 Ga0453684_0353587 3300044712 Bacteria 1656
202 Ga0451576_0220467 3300045051 Bacteria 1980
203 Ga0466967_0268678 3300045976 Bacteria 1634
204 Ga0495645_0124509 3300046543 Bacteria 1812
205 Ga0495680_0071425 3300047322 Bacteria 2643
206 Ga0495684_0102796 3300047471 Bacteria 2160
207 Ga0495686_0060392 3300047472 Bacteria 2356
208 Ga0496111_0036642 3300048914 Bacteria 3508
209 Ga0496121_0044683 3300048924 Bacteria 3817
210 Ga0496121_0211529 3300048924 Bacteria 1373
211 Ga0496124_0060850 3300048927 Bacteria 3167
212 Ga0496125_0001140 3300048928 Bacteria 40434
213 Ga0496126_0137383 3300048929 Bacteria 2107
214 Ga0495682_0004528 3300049460 Bacteria 5927
215 Ga0501031_0123577 3300049568 Bacteria 1691
216 Ga0501033_0019204 3300049570 Bacteria 5168
217 Ga0501033_0085060 3300049570 Bacteria 2317
218 Ga0501034_0013299 3300049571 Bacteria 8481
219 Ga0501034_0122923 3300049571 Bacteria 2581
220 Ga0501034_0294902 3300049571 Bacteria 1559
221 Ga0501036_0099956 3300049572 Bacteria 2453
222 Ga0501038_0143928 3300049574 Bacteria 1948
223 Ga0501043_0032712 3300049579 Bacteria 4089
224 Ga0501046_0012909 3300049580 Bacteria 7103
225 Ga0501046_0022586 3300049580 Bacteria 5182
226 Ga0501047_0016176 3300049581 Bacteria 7117
227 Ga0501047_0091415 3300049581 Bacteria 2921
228 Ga0501047_0121651 3300049581 Bacteria 2492
229 Ga0501067_0001633 3300049583 Bacteria 12313
230 Ga0501069_0051105 3300049585 Bacteria 2300
231 Ga0501070_0000002 3300049586 Bacteria 347524
232 Ga0501070_0031764 3300049586 Bacteria 4423
233 Ga0501070_0049622 3300049586 Bacteria 3485
234 Ga0501070_0072392 3300049586 Bacteria 2853
235 Ga0501070_0161696 3300049586 Bacteria 1846
236 Ga0501073_0019245 3300049589 Bacteria 4932
237 Ga0501073_0061558 3300049589 Bacteria 2619
238 Ga0501075_0115812 3300049591 Bacteria 2038
239 Ga0501079_0020558 3300049741 Bacteria 5048
240 Ga0501080_0082562 3300049742 Bacteria 2985
241 Ga0501083_0020315 3300049744 Bacteria 4621
242 Ga0501035_0001505 3300049822 Bacteria 23839
243 Ga0501035_0088554 3300049822 Bacteria 2727
244 Ga0501044_0000378 3300049823 Bacteria 55508
245 Ga0501044_0252325 3300049823 Bacteria 1705
246 nmdc:mga03683_30809_c1 3300050489 Bacteria 2148
247 nmdc:mga00v17_101066_c1 3300050491 Bacteria 1820
248 nmdc:mga0yw44_100794_c1 3300050492 Bacteria 1839
249 nmdc:mga0yw44_98209_c1 3300050492 Bacteria 1861
250 nmdc:mga0k408_51732_c1 3300050493 Bacteria 2380
251 nmdc:mga0k408_9622_c1 3300050493 Bacteria 5216
252 nmdc:mga06z11_31794_c1 3300050494 Bacteria 2568
253 nmdc:mga09592_38155_c1 3300050508 Bacteria 4031
254 nmdc:mga06r32_19601_c1 3300050510 Bacteria 6212
255 nmdc:mga08y16_138811_c1 3300050511 Bacteria 2527
256 nmdc:mga08y16_35_c1 3300050511 Bacteria 157578
257 nmdc:mga0n895_20432_c1 3300050512 Bacteria 6177
258 nmdc:mga0n895_87584_c1 3300050512 Bacteria 3112
259 nmdc:mga08x19_55328_c1 3300050514 Bacteria 2557
260 nmdc:mga0a205_1216_c1 3300050515 Bacteria 21267
261 Ga0495619_0031293 3300053085 Bacteria 3448
262 Ga0500562_010618 3300053108 Bacteria 2335
263 Ga0500595_012135 3300053119 Bacteria 3341
264 Ga0500608_064170 3300053122 Bacteria 1753
265 Ga0500655_001994 3300053133 Bacteria 3792
266 Ga0500568_0016664 3300053139 Bacteria 3260
267 Ga0500604_0001633 3300053151 Bacteria 6302
268 Ga0500634_0000071 3300053161 Bacteria 40285
269 Ga0501084_0000017 3300054114 Bacteria 148659
270 Ga0501084_0015692 3300054114 Bacteria 6283
271 Ga0590071_002146 3300059421 Bacteria 5020
272 Ga0587077_005922 3300059493 Bacteria 1703
273 Ga0587077_008189 3300059493 Bacteria 1549
274 Ga0587082_005294 3300059504 Bacteria 1672
275 Ga0587091_007971 3300059511 Bacteria 1547
276 Ga0587101_004005 3300059623 Bacteria 1545
277 Ga0587101_004020 3300059623 Bacteria 1543
278 Ga0587109_009875 3300059624 Bacteria 1510
279 Ga0587115_004762 3300059626 Bacteria 1498
280 Ga0587062_003875 3300059639 Bacteria 1548
281 Ga0587076_005707 3300059645 Bacteria 1624
282 Ga0587107_002963 3300059652 Bacteria 1596
283 Ga0587111_0011448 3300060346 Bacteria 1547
284 Ga0501082_0126306 3300060353 Bacteria 2218

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048924 Ga0496121_0211529 Ga0496121_0211529_28_1257 309
2 3300005344 Ga0070661_100002238 Ga0070661_1000022388 337
3 3300025920 Ga0207649_10000077 Ga0207649_1000007768 337
4 3300027876 Ga0209974_10015450 Ga0209974_100154503 337
5 3300049580 Ga0501046_0012909 Ga0501046_0012909_740_2149 337
6 3300039447 Ga0436361_0004694 Ga0436361_0004694_3718_5307 344
7 3300028800 Ga0265338_10038536 Ga0265338_100385362 345
8 3300049571 Ga0501034_0294902 Ga0501034_0294902_302_1543 346
9 3300044712 Ga0453684_0353587 Ga0453684_0353587_231_1619 347
10 3300031250 Ga0265331_10000003 Ga0265331_10000003123 348
11 3300031711 Ga0265314_10004226 Ga0265314_100042269 348
12 3300048929 Ga0496126_0137383 Ga0496126_0137383_592_1971 348
13 3300021388 Ga0213875_10001472 Ga0213875_100014724 351
14 3300037853 Ga0436364_0723260 Ga0436364_0723260_17737_19407 351
15 3300053122 Ga0500608_064170 Ga0500608_064170_140_1519 351
16 3300005548 Ga0070665_100200178 Ga0070665_1002001782 356
17 3300025929 Ga0207664_10131639 Ga0207664_101316391 356
18 3300045051 Ga0451576_0220467 Ga0451576_0220467_365_1750 356
19 3300049823 Ga0501044_0252325 Ga0501044_0252325_161_1540 357
20 3300049570 Ga0501033_0085060 Ga0501033_0085060_768_2171 358
21 3300049572 Ga0501036_0099956 Ga0501036_0099956_452_1855 358
22 3300049581 Ga0501047_0091415 Ga0501047_0091415_695_2098 358
23 3300049822 Ga0501035_0088554 Ga0501035_0088554_535_1938 358
24 3300047472 Ga0495686_0060392 Ga0495686_0060392_435_1814 359
25 3300053119 Ga0500595_012135 Ga0500595_012135_1330_2709 359
26 3300005327 Ga0070658_10027391 Ga0070658_100273912 360
27 3300005455 Ga0070663_100041298 Ga0070663_1000412984 360
28 3300005530 Ga0070679_100167695 Ga0070679_1001676951 360
29 3300005563 Ga0068855_100028699 Ga0068855_1000286996 360
30 3300013105 Ga0157369_10155076 Ga0157369_101550763 360
31 3300025909 Ga0207705_10003317 Ga0207705_100033175 360
32 3300025919 Ga0207657_10003633 Ga0207657_100036335 360
33 3300025949 Ga0207667_10027676 Ga0207667_100276765 360
34 3300026067 Ga0207678_10020753 Ga0207678_100207534 360
35 3300037312 Ga0395899_0020901 Ga0395899_0020901_87_1526 360
36 3300037418 Ga0395900_0037301 Ga0395900_0037301_3375_4820 360
37 3300037466 Ga0395898_0029741 Ga0395898_0029741_1163_2602 360
38 3300038443 Ga0395901_0012064 Ga0395901_0012064_6102_7541 360
39 3300059493 Ga0587077_005922 Ga0587077_005922_91_1470 360
40 3300059504 Ga0587082_005294 Ga0587082_005294_180_1559 360
41 3300059623 Ga0587101_004020 Ga0587101_004020_13_1392 360
42 3300059639 Ga0587062_003875 Ga0587062_003875_155_1534 360
43 3300059645 Ga0587076_005707 Ga0587076_005707_155_1534 360
44 3300039450 Ga0436363_1150390 Ga0436363_1150390_472_2007 361
45 3300041453 Ga0451797_0693308 Ga0451797_0693308_512_1891 361
46 3300059493 Ga0587077_008189 Ga0587077_008189_19_1398 361
47 3300059623 Ga0587101_004005 Ga0587101_004005_16_1395 361
48 3300059652 Ga0587107_002963 Ga0587107_002963_12_1391 361
49 3300006051 Ga0075364_10068587 Ga0075364_100685873 362
50 3300006195 Ga0075366_10032810 Ga0075366_100328103 362
51 3300049585 Ga0501069_0051105 Ga0501069_0051105_523_1857 362
52 3300049744 Ga0501083_0020315 Ga0501083_0020315_104_1438 362
53 3300050491 nmdc:mga00v17_101066_c1 nmdc:mga00v17_101066_c1_407_1795 362
54 3300050492 nmdc:mga0yw44_100794_c1 nmdc:mga0yw44_100794_c1_328_1716 362
55 3300050493 nmdc:mga0k408_9622_c1 nmdc:mga0k408_9622_c1_804_2192 362
56 3300050494 nmdc:mga06z11_31794_c1 nmdc:mga06z11_31794_c1_378_1766 362
57 3300060353 Ga0501082_0126306 Ga0501082_0126306_50_1384 362
58 3300005548 Ga0070665_100025414 Ga0070665_1000254143 363
59 3300009545 Ga0105237_10011815 Ga0105237_100118154 363
60 3300010375 Ga0105239_10001582 Ga0105239_1000158221 363
61 3300025914 Ga0207671_10003123 Ga0207671_1000312311 363
62 3300025915 Ga0207693_10000965 Ga0207693_1000096520 363
63 3300028379 Ga0268266_10000265 Ga0268266_1000026528 363
64 3300031250 Ga0265331_10001097 Ga0265331_1000109712 363
65 3300031251 Ga0265327_10000187 Ga0265327_1000018780 363
66 3300049568 Ga0501031_0123577 Ga0501031_0123577_209_1618 363
67 3300049570 Ga0501033_0019204 Ga0501033_0019204_696_2105 363
68 3300049574 Ga0501038_0143928 Ga0501038_0143928_125_1555 363
69 3300049579 Ga0501043_0032712 Ga0501043_0032712_2163_3572 363
70 3300049581 Ga0501047_0016176 Ga0501047_0016176_711_2120 363
71 3300049586 Ga0501070_0031764 Ga0501070_0031764_2305_3714 363
72 3300049589 Ga0501073_0061558 Ga0501073_0061558_218_1627 363
73 3300049580 Ga0501046_0022586 Ga0501046_0022586_3680_5110 364
74 3300049581 Ga0501047_0121651 Ga0501047_0121651_29_1324 364
75 3300049586 Ga0501070_0049622 Ga0501070_0049622_1082_2527 364
76 3300049591 Ga0501075_0115812 Ga0501075_0115812_44_1561 364
77 3300005435 Ga0070714_100018938 Ga0070714_1000189383 365
78 3300005437 Ga0070710_10001488 Ga0070710_100014887 365
79 3300005439 Ga0070711_100024946 Ga0070711_1000249461 365
80 3300005536 Ga0070697_100223614 Ga0070697_1002236141 365
81 3300006028 Ga0070717_10089767 Ga0070717_100897672 365
82 3300048914 Ga0496111_0036642 Ga0496111_0036642_592_1971 365
83 3300048928 Ga0496125_0001140 Ga0496125_0001140_22322_23701 365
84 3300025939 Ga0207665_10024538 Ga0207665_100245383 366
85 3300039437 Ga0436365_0004708 Ga0436365_0004708_1884_3245 366
86 3300049586 Ga0501070_0072392 Ga0501070_0072392_467_1873 366
87 3300053108 Ga0500562_010618 Ga0500562_010618_175_1554 366
88 3300006871 Ga0075434_100284538 Ga0075434_1002845382 367
89 3300031711 Ga0265314_10028976 Ga0265314_100289763 367
90 3300014968 Ga0157379_10062917 Ga0157379_100629172 369
91 3300039438 Ga0436360_0447311 Ga0436360_0447311_20_1597 370
92 3300005336 Ga0070680_100000110 Ga0070680_1000001105 371
93 3300010375 Ga0105239_10019729 Ga0105239_100197293 371
94 3300013105 Ga0157369_10256544 Ga0157369_102565442 371
95 3300021388 Ga0213875_10002765 Ga0213875_1000276510 372
96 3300021388 Ga0213875_10015392 Ga0213875_100153922 372
97 3300031595 Ga0265313_10001803 Ga0265313_1000180315 372
98 3300035242 Ga0373962_0002784 Ga0373962_0002784_734_2257 372
99 3300037853 Ga0436364_0169648 Ga0436364_0169648_61649_63109 372
100 3300037853 Ga0436364_1081327 Ga0436364_1081327_232_1737 372
101 3300039450 Ga0436363_0638174 Ga0436363_0638174_310_1818 372
102 3300049586 Ga0501070_0000002 Ga0501070_0000002_191578_192984 372
103 3300049822 Ga0501035_0001505 Ga0501035_0001505_17322_18728 372
104 3300049823 Ga0501044_0000378 Ga0501044_0000378_45910_47316 372
105 3300009177 Ga0105248_10000005 Ga0105248_10000005506 373
106 3300025941 Ga0207711_10000002 Ga0207711_10000002503 373
107 3300035111 Ga0373923_0043627 Ga0373923_0043627_159_1772 373
108 3300035117 Ga0373953_0004482 Ga0373953_0004482_1257_2870 373
109 3300035172 Ga0373955_0023810 Ga0373955_0023810_20_1618 373
110 3300035724 Ga0373933_0024182 Ga0373933_0024182_1241_2854 373
111 3300047322 Ga0495680_0071425 Ga0495680_0071425_537_2135 373
112 3300047471 Ga0495684_0102796 Ga0495684_0102796_129_1727 373
113 3300053085 Ga0495619_0031293 Ga0495619_0031293_1077_2690 373
114 3300005355 Ga0070671_100023508 Ga0070671_1000235083 374
115 3300025931 Ga0207644_10006666 Ga0207644_100066663 374
116 3300036712 Ga0316584_0015826 Ga0316584_0015826_2176_3516 374
117 3300050512 nmdc:mga0n895_87584_c1 nmdc:mga0n895_87584_c1_22_1563 374
118 3300050515 nmdc:mga0a205_1216_c1 nmdc:mga0a205_1216_c1_1063_2604 374
119 iso_pu_bacteria 2842333319 2842334896 374
120 3300053151 Ga0500604_0001633 Ga0500604_0001633_2313_3692 375
121 3300053161 Ga0500634_0000071 Ga0500634_0000071_25880_27259 375
122 iso_pu_bacteria 2524023250 2524612795 375
123 3300005467 Ga0070706_100062402 Ga0070706_1000624023 377
124 3300005471 Ga0070698_100002489 Ga0070698_10000248914 377
125 3300006028 Ga0070717_10000258 Ga0070717_1000025810 377
126 3300013105 Ga0157369_10002084 Ga0157369_100020843 377
127 3300021388 Ga0213875_10000673 Ga0213875_1000067314 377
128 3300025910 Ga0207684_10112718 Ga0207684_101127182 377
129 3300025921 Ga0207652_10090168 Ga0207652_100901682 377
130 3300031595 Ga0265313_10004848 Ga0265313_1000484811 377
131 3300035725 Ga0373947_0090425 Ga0373947_0090425_378_1736 377
132 3300037853 Ga0436364_0630944 Ga0436364_0630944_40597_42141 377
133 3300045976 Ga0466967_0268678 Ga0466967_0268678_34_1407 377
134 3300005353 Ga0070669_100011692 Ga0070669_1000116923 378
135 3300005356 Ga0070674_100004336 Ga0070674_1000043365 378
136 3300005458 Ga0070681_10025916 Ga0070681_100259167 378
137 3300005467 Ga0070706_100033492 Ga0070706_1000334922 378
138 3300005468 Ga0070707_100319156 Ga0070707_1003191561 378
139 3300005518 Ga0070699_100177790 Ga0070699_1001777901 378
140 3300005530 Ga0070679_100023162 Ga0070679_1000231622 378
141 3300005536 Ga0070697_100211279 Ga0070697_1002112792 378
142 3300005718 Ga0068866_10021586 Ga0068866_100215863 378
143 3300005719 Ga0068861_100050723 Ga0068861_1000507233 378
144 3300005981 Ga0081538_10000854 Ga0081538_1000085411 378
145 3300006195 Ga0075366_10055396 Ga0075366_100553963 378
146 3300006881 Ga0068865_100062398 Ga0068865_1000623982 378
147 3300009094 Ga0111539_10000445 Ga0111539_1000044519 378
148 3300009551 Ga0105238_10023495 Ga0105238_100234954 378
149 3300014968 Ga0157379_10187135 Ga0157379_101871352 378
150 3300021361 Ga0213872_10024355 Ga0213872_100243552 378
151 3300025899 Ga0207642_10017369 Ga0207642_100173692 378
152 3300025906 Ga0207699_10034826 Ga0207699_100348262 378
153 3300025912 Ga0207707_10036624 Ga0207707_100366243 378
154 3300025916 Ga0207663_10033081 Ga0207663_100330814 378
155 3300025921 Ga0207652_10089100 Ga0207652_100891002 378
156 3300025923 Ga0207681_10003995 Ga0207681_100039953 378
157 3300025924 Ga0207694_10056715 Ga0207694_100567153 378
158 3300025937 Ga0207669_10015427 Ga0207669_100154273 378
159 3300027907 Ga0207428_10000242 Ga0207428_1000024252 378
160 3300028380 Ga0268265_10074451 Ga0268265_100744512 378
161 3300028800 Ga0265338_10000005 Ga0265338_10000005401 378
162 3300031241 Ga0265325_10000005 Ga0265325_10000005116 378
163 3300031249 Ga0265339_10003263 Ga0265339_100032637 378
164 3300031250 Ga0265331_10002006 Ga0265331_100020063 378
165 3300031852 Ga0307410_10090715 Ga0307410_100907153 378
166 3300031995 Ga0307409_100006223 Ga0307409_1000062233 378
167 3300036401 Ga0373937_0049240 Ga0373937_0049240_1117_2451 378
168 3300036401 Ga0373937_0142325 Ga0373937_0142325_416_1747 378
169 3300037853 Ga0436364_0692364 Ga0436364_0692364_10_1353 378
170 3300039447 Ga0436361_0692362 Ga0436361_0692362_45_1400 378
171 3300039447 Ga0436361_0958487 Ga0436361_0958487_7627_8985 378
172 3300049742 Ga0501080_0082562 Ga0501080_0082562_1188_2537 378
173 3300050493 nmdc:mga0k408_51732_c1 nmdc:mga0k408_51732_c1_542_1867 378
174 3300050511 nmdc:mga08y16_35_c1 nmdc:mga08y16_35_c1_18525_19850 378
175 3300059421 Ga0590071_002146 Ga0590071_002146_1984_3312 378
176 iso_pu_bacteria 8054563764 8054565212 379
177 3300048924 Ga0496121_0044683 Ga0496121_0044683_2198_3577 381
178 3300009176 Ga0105242_10043035 Ga0105242_100430353 382
179 3300021384 Ga0213876_10000201 Ga0213876_1000020152 382
180 3300025934 Ga0207686_10024758 Ga0207686_100247583 382
181 3300028577 Ga0265318_10000015 Ga0265318_10000015163 382
182 3300039437 Ga0436365_1073490 Ga0436365_1073490_66064_67419 382
183 3300053139 Ga0500568_0016664 Ga0500568_0016664_434_1789 382
184 3300054114 Ga0501084_0000017 Ga0501084_0000017_66225_67580 382
185 3300031456 Ga0307513_10000261 Ga0307513_1000026139 383
186 3300031456 Ga0307513_10013311 Ga0307513_100133116 383
187 iso_pu_bacteria 2643221580 2643912300 383
188 iso_pu_bacteria 2643221591 2643963493 383
189 iso_pu_bacteria 2643221629 2644167621 383
190 iso_pu_bacteria 2643221662 2644349082 383
191 iso_pu_bacteria 2643221674 2644410612 383
192 iso_pu_bacteria 2842694124 2842696021 383
193 iso_pu_bacteria 2932401849 2932403271 383
194 3300005327 Ga0070658_10091054 Ga0070658_100910544 384
195 3300005339 Ga0070660_100007572 Ga0070660_1000075722 384
196 3300005341 Ga0070691_10010527 Ga0070691_100105274 384
197 3300005341 Ga0070691_10022103 Ga0070691_100221034 384
198 3300005366 Ga0070659_100019552 Ga0070659_1000195524 384
199 3300005434 Ga0070709_10129597 Ga0070709_101295972 384
200 3300005539 Ga0068853_100002602 Ga0068853_10000260212 384
201 3300005539 Ga0068853_100263562 Ga0068853_1002635621 384
202 3300005545 Ga0070695_100166371 Ga0070695_1001663712 384
203 3300005546 Ga0070696_100106501 Ga0070696_1001065012 384
204 3300005563 Ga0068855_100000111 Ga0068855_10000011172 384
205 3300005563 Ga0068855_100024301 Ga0068855_1000243014 384
206 3300005563 Ga0068855_100110535 Ga0068855_1001105352 384
207 3300005577 Ga0068857_100000605 Ga0068857_1000006053 384
208 3300005614 Ga0068856_100001640 Ga0068856_10000164018 384
209 3300005616 Ga0068852_100097205 Ga0068852_1000972053 384
210 3300006871 Ga0075434_100078659 Ga0075434_1000786592 384
211 3300009093 Ga0105240_10000122 Ga0105240_10000122112 384
212 3300009093 Ga0105240_10098559 Ga0105240_100985591 384
213 3300009545 Ga0105237_10004738 Ga0105237_1000473818 384
214 3300009551 Ga0105238_10003077 Ga0105238_100030779 384
215 3300009551 Ga0105238_10027906 Ga0105238_100279062 384
216 3300010375 Ga0105239_10001240 Ga0105239_1000124034 384
217 3300010375 Ga0105239_10002091 Ga0105239_1000209121 384
218 3300010375 Ga0105239_10027585 Ga0105239_100275854 384
219 3300013100 Ga0157373_10030921 Ga0157373_100309213 384
220 3300013104 Ga0157370_10004736 Ga0157370_100047364 384
221 3300013104 Ga0157370_10114749 Ga0157370_101147491 384
222 3300013105 Ga0157369_10004064 Ga0157369_1000406413 384
223 3300013105 Ga0157369_10008046 Ga0157369_100080463 384
224 3300013307 Ga0157372_10006651 Ga0157372_100066516 384
225 3300014968 Ga0157379_10021167 Ga0157379_100211672 384
226 3300025906 Ga0207699_10044108 Ga0207699_100441082 384
227 3300025909 Ga0207705_10000954 Ga0207705_1000095413 384
228 3300025912 Ga0207707_10006557 Ga0207707_1000655711 384
229 3300025913 Ga0207695_10000173 Ga0207695_10000173113 384
230 3300025913 Ga0207695_10039786 Ga0207695_100397863 384
231 3300025914 Ga0207671_10123717 Ga0207671_101237171 384
232 3300025914 Ga0207671_10183873 Ga0207671_101838732 384
233 3300025917 Ga0207660_10042770 Ga0207660_100427704 384
234 3300025919 Ga0207657_10000951 Ga0207657_100009517 384
235 3300025921 Ga0207652_10017179 Ga0207652_100171798 384
236 3300025924 Ga0207694_10000005 Ga0207694_10000005372 384
237 3300025924 Ga0207694_10093399 Ga0207694_100933993 384
238 3300025949 Ga0207667_10000011 Ga0207667_10000011216 384
239 3300025949 Ga0207667_10014415 Ga0207667_100144153 384
240 3300025949 Ga0207667_10133535 Ga0207667_101335351 384
241 3300026041 Ga0207639_10032753 Ga0207639_100327535 384
242 3300026041 Ga0207639_10164540 Ga0207639_101645403 384
243 3300026041 Ga0207639_10214650 Ga0207639_102146501 384
244 3300026078 Ga0207702_10002298 Ga0207702_1000229810 384
245 3300026116 Ga0207674_10000330 Ga0207674_1000033037 384
246 3300026142 Ga0207698_10015262 Ga0207698_100152622 384
247 3300026142 Ga0207698_10156135 Ga0207698_101561352 384
248 3300026142 Ga0207698_10197160 Ga0207698_101971601 384
249 3300031730 Ga0307516_10078615 Ga0307516_100786152 384
250 3300036401 Ga0373937_0212568 Ga0373937_0212568_13_1374 384
251 3300046543 Ga0495645_0124509 Ga0495645_0124509_26_1387 384
252 3300049460 Ga0495682_0004528 Ga0495682_0004528_41_1402 384
253 3300049583 Ga0501067_0001633 Ga0501067_0001633_5418_6773 384
254 3300049589 Ga0501073_0019245 Ga0501073_0019245_1714_3069 384
255 3300049741 Ga0501079_0020558 Ga0501079_0020558_2796_4151 384
256 3300050512 nmdc:mga0n895_20432_c1 nmdc:mga0n895_20432_c1_548_1909 384
257 3300050514 nmdc:mga08x19_55328_c1 nmdc:mga08x19_55328_c1_484_1845 384
258 3300053133 Ga0500655_001994 Ga0500655_001994_708_2069 384
259 3300054114 Ga0501084_0015692 Ga0501084_0015692_1460_2815 384
260 3300005937 Ga0081455_10030605 Ga0081455_100306055 385
261 3300025915 Ga0207693_10035247 Ga0207693_100352471 385
262 3300025942 Ga0207689_10060743 Ga0207689_100607432 385
263 3300031727 Ga0316576_10086835 Ga0316576_100868352 385
264 3300036712 Ga0316584_0004750 Ga0316584_0004750_334_1731 385
265 3300037418 Ga0395900_0012113 Ga0395900_0012113_4017_5471 385
266 3300038742 Ga0400486_00284 Ga0400486_00284_197_1561 385
267 3300005341 Ga0070691_10011113 Ga0070691_100111133 386
268 3300005441 Ga0070700_100027451 Ga0070700_1000274511 386
269 3300005444 Ga0070694_100056711 Ga0070694_1000567112 386
270 3300005545 Ga0070695_100005234 Ga0070695_1000052344 386
271 3300005937 Ga0081455_10001025 Ga0081455_1000102530 386
272 3300005983 Ga0081540_1000205 Ga0081540_100020551 386
273 3300006846 Ga0075430_100070818 Ga0075430_1000708183 386
274 3300006847 Ga0075431_100040716 Ga0075431_1000407162 386
275 3300006880 Ga0075429_100035924 Ga0075429_1000359243 386
276 3300026075 Ga0207708_10082878 Ga0207708_100828782 386
277 3300035114 Ga0373939_0009993 Ga0373939_0009993_40_1569 386
278 3300035691 Ga0373931_0086307 Ga0373931_0086307_151_1680 386
279 3300050508 nmdc:mga09592_38155_c1 nmdc:mga09592_38155_c1_1440_2933 386
280 3300050510 nmdc:mga06r32_19601_c1 nmdc:mga06r32_19601_c1_3351_4844 386
281 3300050511 nmdc:mga08y16_138811_c1 nmdc:mga08y16_138811_c1_48_1568 386
282 3300003320 rootH2_10030232 rootH2_100302323 387
283 3300006048 Ga0075363_100014398 Ga0075363_1000143983 387
284 3300025972 Ga0207668_10046486 Ga0207668_100464862 387
285 3300048927 Ga0496124_0060850 Ga0496124_0060850_1406_2785 387
286 3300049571 Ga0501034_0013299 Ga0501034_0013299_5848_7227 387
287 3300049571 Ga0501034_0122923 Ga0501034_0122923_437_1816 387
288 3300049586 Ga0501070_0161696 Ga0501070_0161696_331_1761 387
289 3300050489 nmdc:mga03683_30809_c1 nmdc:mga03683_30809_c1_552_1931 387
290 3300050492 nmdc:mga0yw44_98209_c1 nmdc:mga0yw44_98209_c1_72_1451 387
291 3300059511 Ga0587091_007971 Ga0587091_007971_19_1398 387
292 3300059624 Ga0587109_009875 Ga0587109_009875_113_1492 387
293 3300059626 Ga0587115_004762 Ga0587115_004762_17_1396 387
294 3300060346 Ga0587111_0011448 Ga0587111_0011448_19_1398 387

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05697

Trigger_N

Bacterial trigger factor protein (TF)

1

144

0.98

PF05698

Trigger_C

Bacterial trigger factor protein (TF) C-terminus

386

487

0.94

PF00254

FKBP_C

FKBP-type peptidyl-prolyl cis-trans isomerase

154

238

0.93

PF05698

Trigger_C

Bacterial trigger factor protein (TF) C-terminus

260

342

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1p9y-assembly2.cif.gz_B ribosome binding of e. coli trigger factor mutant f44l. 0.8699 1 125
1p9y-assembly2.cif.gz_B ribosome binding of e. coli trigger factor mutant f44l. 0.8632 1 125
1hxv-assembly1.cif.gz_A ppiase domain of the mycoplasma genitalium trigger factor 0.8491 170 249
4dip-assembly8.cif.gz_H crystal structure of human peptidyl-prolyl cis-trans isomerase fkbp14 0.8351 165 252
1hxv-assembly1.cif.gz_A ppiase domain of the mycoplasma genitalium trigger factor 0.7974 170 249
ID Description Score Start End Superfamily
2mlzA03 Alpha Beta;Roll;Chitinase A; domain 3; 0.887 158 256 3.10.50.40
2mlzA03 Alpha Beta;Roll;Chitinase A; domain 3; 0.8788 158 256 3.10.50.40
af_Q5Z4M6_246_353_1.10.3120.10 Mainly Alpha;Orthogonal Bundle;Trigger factor, domain 2;Trigger factor, C-terminal domain 0.8783 164 256 1.10.3120.10
af_P9WG55_151_243_1.10.3120.10 Mainly Alpha;Orthogonal Bundle;Trigger factor, domain 2;Trigger factor, C-terminal domain 0.8757 158 256 1.10.3120.10
1p9yA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Trigger factor ribosome-binding domain 0.873 1 125 3.30.70.1050
ID Description Score Start End GO Terms
AF-A0A833LNG8-F1-model_v4 Trigger factor 0.9428 1 102 GO:0006457
GO:0015031
AF-A0A800C5K1-F1-model_v4 peptidylprolyl isomerase (EC 5.2.1.8) 0.9397 167 246 GO:0003755
GO:0005829
GO:0031419
GO:0046872
GO:0051539
AF-A0A848SH35-F1-model_v4 Trigger factor 0.9316 1 124 GO:0006457
GO:0015031
AF-A0A833LNG8-F1-model_v4 Trigger factor 0.9251 1 102 GO:0006457
GO:0015031
AF-A0A435LUD1-F1-model_v4 deleted 0.9207 253 386

Feature Viewer

pLDDT pTM Quality
87.46 0.64 Medium
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Predicted Structure (AlphaFold2)

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Map