F390605

General Info

Members Datasets Scaffolds Average Seq Length
291 175 582 200

Family's Representative Sequence

Representative Sequence 3300050510|nmdc:mga06r32_217265_c1|nmdc:mga06r32_217265_c1_337_990
Length 217
Sequence MFTGIVTAVGQVRSVEPVDGGLDIQITASYRGLTEGESIAVAGACLTVVAVGEGWFQVHCVATTLERTRFAELKNGARVNLERPVTAGTALGGHLVQGHVDAMGTIVSVRQQSDARLLDIEVPEEVERVTIPLGSITVDGVSLTINAMPRHGIIQVSLVPYTVAETTLGSLAEGNRVHLEGDVIGKYVSAFLSRGSQGAGESGSQPAAPRPPGSLGP

Samples

Sample ID Description Type Environment
1 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
79 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
80 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
81 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
82 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
83 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
84 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
85 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
86 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
87 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
88 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
89 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
90 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
91 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
92 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
93 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
99 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
100 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
101 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
102 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
103 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
104 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
105 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
111 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
127 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
133 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
134 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
135 3300049659 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control Metagenome Rhizosphere
136 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
137 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
138 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
139 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
140 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
141 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
142 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
143 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
144 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
145 3300049680 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought Metagenome Rhizosphere
146 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
147 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
148 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
149 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
153 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
154 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
155 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
156 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
157 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
158 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
159 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
165 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
166 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
167 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
168 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
171 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
172 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
173 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
174 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
175 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 12.71
Rhizosphere 87.29
Stem 0
Stem Tuber 0
Unclassified 2.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga06r32_217265_c1 3300050510 Bacteria 1899
2 MBSR1b_contig_2631385 2162886012 Bacteria 1466
3 Ga0065707_10268555 3300005295 Bacteria 1077
4 Ga0070690_100145882 3300005330 Bacteria 1610
5 Ga0070670_100183720 3300005331 Bacteria 1816
6 Ga0070687_100207977 3300005343 Bacteria 1190
7 Ga0070661_100273255 3300005344 Bacteria 1309
8 Ga0070668_100023479 3300005347 Bacteria 4664
9 Ga0070675_100017517 3300005354 Bacteria 5693
10 Ga0070671_100005236 3300005355 Bacteria 10335
11 Ga0070673_100121864 3300005364 Bacteria 2177
12 Ga0070659_100173334 3300005366 Bacteria 1768
13 Ga0070667_100240390 3300005367 Bacteria 1617
14 Ga0070667_100393282 3300005367 Bacteria 1261
15 Ga0070694_100069483 3300005444 Bacteria 2423
16 Ga0070708_100027440 3300005445 Bacteria 4886
17 Ga0070708_100126697 3300005445 Bacteria 2361
18 Ga0070708_100165444 3300005445 Bacteria 2063
19 Ga0070708_100327055 3300005445 Bacteria 1444
20 Ga0070662_100274542 3300005457 Bacteria 1362
21 Ga0070706_100132740 3300005467 Bacteria 2324
22 Ga0070707_100790323 3300005468 Bacteria 913
23 Ga0070698_100003812 3300005471 Bacteria 16562
24 Ga0070698_100182465 3300005471 Bacteria 2037
25 Ga0070699_100000092 3300005518 Bacteria 86686
26 Ga0070699_100001718 3300005518 Bacteria 19974
27 Ga0070699_100004226 3300005518 Bacteria 12700
28 Ga0070699_100562850 3300005518 Bacteria 1038
29 Ga0070679_101031136 3300005530 Bacteria 767
30 Ga0070697_100032607 3300005536 Bacteria 4193
31 Ga0070697_100131041 3300005536 Bacteria 2103
32 Ga0070697_100387636 3300005536 Bacteria 1211
33 Ga0070672_100078606 3300005543 Bacteria 2640
34 Ga0070672_100450390 3300005543 Bacteria 1109
35 Ga0070696_100044160 3300005546 Bacteria 3086
36 Ga0070665_100049907 3300005548 Bacteria 4199
37 Ga0070704_100247467 3300005549 Bacteria 1462
38 Ga0070664_100094444 3300005564 Bacteria 2593
39 Ga0068859_100082491 3300005617 Bacteria 3258
40 Ga0068859_100280204 3300005617 Bacteria 1760
41 Ga0068864_100009694 3300005618 Bacteria 7945
42 Ga0068861_100156275 3300005719 Bacteria 1877
43 Ga0068870_10281849 3300005840 Bacteria 1042
44 Ga0068863_100075341 3300005841 Bacteria 3193
45 Ga0068863_100145348 3300005841 Bacteria 2267
46 Ga0068860_101162524 3300005843 Bacteria 792
47 Ga0068862_100318998 3300005844 Bacteria 1434
48 Ga0075428_100090560 3300006844 Bacteria 3337
49 Ga0075430_100109757 3300006846 Bacteria 2301
50 Ga0075430_100192936 3300006846 Bacteria 1693
51 Ga0075430_100237461 3300006846 Bacteria 1511
52 Ga0075431_100044517 3300006847 Bacteria 4578
53 Ga0075431_100224369 3300006847 Bacteria 1916
54 Ga0075433_10024734 3300006852 Bacteria 5071
55 Ga0075433_10070546 3300006852 Bacteria 3071
56 Ga0075433_10831695 3300006852 Bacteria 806
57 Ga0075434_100013061 3300006871 Bacteria 7887
58 Ga0075429_100415538 3300006880 Unclassified 1178
59 Ga0068865_100041164 3300006881 Bacteria 3143
60 Ga0097620_100082489 3300006931 Bacteria 3258
61 Ga0097620_100280208 3300006931 Bacteria 1760
62 Ga0075435_100182648 3300007076 Bacteria 1773
63 Ga0075435_100584688 3300007076 Bacteria 968
64 Ga0111539_10122783 3300009094 Bacteria 3044
65 Ga0105247_10531378 3300009101 Bacteria 862
66 Ga0114129_10005047 3300009147 Bacteria 18576
67 Ga0114129_10420053 3300009147 Bacteria 1759
68 Ga0114129_10424704 3300009147 Bacteria 1748
69 Ga0105248_10448320 3300009177 Bacteria 1454
70 Ga0105248_10524995 3300009177 Bacteria 1335
71 Ga0105249_11315466 3300009553 Bacteria 794
72 Ga0105239_10003670 3300010375 Bacteria 18744
73 Ga0105246_10256649 3300011119 Bacteria 1390
74 Ga0105246_10704797 3300011119 Bacteria 885
75 Ga0157373_10872896 3300013100 Bacteria 666
76 Ga0157375_10481813 3300013308 Bacteria 1406
77 Ga0157375_11178032 3300013308 Bacteria 898
78 Ga0163163_10006214 3300014325 Bacteria 10419
79 Ga0163163_10022061 3300014325 Bacteria 6021
80 Ga0157380_10207435 3300014326 Bacteria 1744
81 Ga0157379_10015682 3300014968 Bacteria 6658
82 Ga0207682_10056576 3300025893 Bacteria 1633
83 Ga0207707_10167212 3300025912 Bacteria 1922
84 Ga0207646_10381218 3300025922 Bacteria 1274
85 Ga0207650_10439451 3300025925 Bacteria 1084
86 Ga0207659_10011324 3300025926 Bacteria 5634
87 Ga0207687_11072767 3300025927 Bacteria 691
88 Ga0207644_10012336 3300025931 Bacteria 5675
89 Ga0207706_10624679 3300025933 Bacteria 924
90 Ga0207691_10034706 3300025940 Bacteria 4689
91 Ga0207691_10139603 3300025940 Bacteria 2136
92 Ga0207711_10991664 3300025941 Bacteria 779
93 Ga0207711_11234727 3300025941 Bacteria 689
94 Ga0207679_10079668 3300025945 Bacteria 2499
95 Ga0207651_10021736 3300025960 Bacteria 3907
96 Ga0207668_10005727 3300025972 Bacteria 7322
97 Ga0207658_10361318 3300025986 Bacteria 1267
98 Ga0207639_10482838 3300026041 Bacteria 1130
99 Ga0207641_10068968 3300026088 Bacteria 3034
100 Ga0207641_10099574 3300026088 Bacteria 2558
101 Ga0207641_10813466 3300026088 Bacteria 925
102 Ga0207676_10021516 3300026095 Bacteria 4731
103 Ga0207676_10312197 3300026095 Bacteria 1440
104 Ga0207676_10518632 3300026095 Bacteria 1134
105 Ga0207674_10004982 3300026116 Bacteria 15877
106 Ga0207675_100249753 3300026118 Bacteria 1717
107 Ga0207683_10117608 3300026121 Bacteria 2384
108 Ga0268266_10017792 3300028379 Bacteria 6057
109 Ga0268266_11428345 3300028379 Bacteria 667
110 Ga0268265_10379581 3300028380 Bacteria 1300
111 Ga0307408_100043986 3300031548 Bacteria 3180
112 Ga0307408_100137197 3300031548 Bacteria 1915
113 Ga0307408_100161038 3300031548 Bacteria 1782
114 Ga0307408_100248158 3300031548 Bacteria 1467
115 Ga0307408_100388683 3300031548 Bacteria 1195
116 Ga0307408_100737233 3300031548 Bacteria 889
117 Ga0307405_10026413 3300031731 Bacteria 3349
118 Ga0307405_10040961 3300031731 Bacteria 2809
119 Ga0307405_10226784 3300031731 Bacteria 1374
120 Ga0307413_10002474 3300031824 Bacteria 7520
121 Ga0307413_10004111 3300031824 Bacteria 6268
122 Ga0307413_10014424 3300031824 Bacteria 4013
123 Ga0307413_10108112 3300031824 Bacteria 1855
124 Ga0307413_10110002 3300031824 Bacteria 1842
125 Ga0307410_10000656 3300031852 Bacteria 14282
126 Ga0307410_10001510 3300031852 Bacteria 10569
127 Ga0307410_10002604 3300031852 Bacteria 8771
128 Ga0307410_10044904 3300031852 Bacteria 2938
129 Ga0307406_10007120 3300031901 Bacteria 6191
130 Ga0307406_10010174 3300031901 Bacteria 5300
131 Ga0307406_10079598 3300031901 Bacteria 2173
132 Ga0307407_10002124 3300031903 Bacteria 7619
133 Ga0307407_10006506 3300031903 Bacteria 5202
134 Ga0307407_10022021 3300031903 Bacteria 3298
135 Ga0307407_10159989 3300031903 Bacteria 1473
136 Ga0307407_10214685 3300031903 Bacteria 1297
137 Ga0307412_10153825 3300031911 Bacteria 1700
138 Ga0307412_10236079 3300031911 Bacteria 1411
139 Ga0307409_100003582 3300031995 Bacteria 8481
140 Ga0307409_100050968 3300031995 Bacteria 3165
141 Ga0307409_100086641 3300031995 Bacteria 2550
142 Ga0307409_100107683 3300031995 Bacteria 2329
143 Ga0307409_100232450 3300031995 Bacteria 1672
144 Ga0307409_100563852 3300031995 Bacteria 1120
145 Ga0307416_100002676 3300032002 Bacteria 10311
146 Ga0307416_100007187 3300032002 Bacteria 7049
147 Ga0307416_100009660 3300032002 Bacteria 6329
148 Ga0307416_100056143 3300032002 Bacteria 3176
149 Ga0307416_100180854 3300032002 Bacteria 1976
150 Ga0307416_100215782 3300032002 Bacteria 1835
151 Ga0307414_10010839 3300032004 Bacteria 5316
152 Ga0307414_10021287 3300032004 Bacteria 4065
153 Ga0307414_10086350 3300032004 Bacteria 2315
154 Ga0307414_10086750 3300032004 Bacteria 2310
155 Ga0307414_10153019 3300032004 Bacteria 1822
156 Ga0307414_10234368 3300032004 Bacteria 1516
157 Ga0307414_10266754 3300032004 Bacteria 1432
158 Ga0307411_10051420 3300032005 Bacteria 2688
159 Ga0307411_10075510 3300032005 Bacteria 2301
160 Ga0307411_10282339 3300032005 Bacteria 1322
161 Ga0307411_10456192 3300032005 Bacteria 1070
162 Ga0307415_100069234 3300032126 Bacteria 2473
163 Ga0307415_100081867 3300032126 Bacteria 2307
164 Ga0307415_100102214 3300032126 Bacteria 2105
165 Ga0373928_0016002 3300035084 Bacteria 1531
166 Ga0373940_0044404 3300035088 Bacteria 1231
167 Ga0373940_0050673 3300035088 Bacteria 1165
168 Ga0373960_0037073 3300035121 Bacteria 1392
169 Ga0373931_0042452 3300035691 Bacteria 2391
170 Ga0395900_0504321 3300037418 Bacteria 1160
171 Ga0395898_0496531 3300037466 Bacteria 1161
172 Ga0395905_0035120 3300037471 Bacteria 4707
173 Ga0395901_0133703 3300038443 Bacteria 2607
174 Ga0242420_002496 3300038996 Bacteria 2626
175 Ga0450896_014127 3300042133 Bacteria 1139
176 Ga0439446_0053486 3300042156 Bacteria 1209
177 Ga0439446_0068867 3300042156 Bacteria 1080
178 Ga0439446_0082595 3300042156 Bacteria 997
179 Ga0451577_0006182 3300042876 Bacteria 12031
180 Ga0451577_0210756 3300042876 Bacteria 1755
181 Ga0451577_0215708 3300042876 Bacteria 1734
182 Ga0453683_0079250 3300044673 Bacteria 2057
183 Ga0453683_0091948 3300044673 Bacteria 1902
184 Ga0453683_0154652 3300044673 Bacteria 1450
185 Ga0453684_0881969 3300044712 Bacteria 959
186 Ga0496100_0451289 3300048903 Bacteria 986
187 Ga0496101_0024589 3300048904 Bacteria 4170
188 Ga0496102_0079291 3300048905 Bacteria 3024
189 Ga0496102_0226797 3300048905 Bacteria 1761
190 Ga0496103_0009400 3300048906 Bacteria 5791
191 Ga0496103_0029361 3300048906 Bacteria 3342
192 Ga0496104_0004117 3300048907 Bacteria 12628
193 Ga0496104_0047575 3300048907 Bacteria 4042
194 Ga0496104_0055128 3300048907 Bacteria 3758
195 Ga0496104_0227048 3300048907 Bacteria 1779
196 Ga0496105_0044843 3300048908 Bacteria 3648
197 Ga0496105_0158375 3300048908 Bacteria 1859
198 Ga0496105_0243340 3300048908 Bacteria 1459
199 Ga0496106_0030609 3300048909 Bacteria 4012
200 Ga0496106_0172440 3300048909 Bacteria 1715
201 Ga0496106_0253300 3300048909 Bacteria 1408
202 Ga0496107_0156270 3300048910 Bacteria 1689
203 Ga0496108_0001855 3300048911 Bacteria 16893
204 Ga0496108_0005399 3300048911 Bacteria 10331
205 Ga0496108_0015552 3300048911 Bacteria 6205
206 Ga0496109_0002332 3300048912 Bacteria 15815
207 Ga0496109_0024075 3300048912 Bacteria 5409
208 Ga0496109_0049322 3300048912 Bacteria 3832
209 Ga0496109_0051921 3300048912 Bacteria 3735
210 Ga0496110_0007426 3300048913 Bacteria 8755
211 Ga0496110_0007735 3300048913 Bacteria 8603
212 Ga0496110_0122353 3300048913 Bacteria 2345
213 Ga0496111_0117529 3300048914 Bacteria 1962
214 Ga0496111_0151097 3300048914 Bacteria 1722
215 Ga0496112_0003064 3300048915 Bacteria 13691
216 Ga0496112_0006942 3300048915 Bacteria 9994
217 Ga0496112_0021827 3300048915 Bacteria 6092
218 Ga0496113_0002060 3300048916 Bacteria 11555
219 Ga0496113_0017841 3300048916 Bacteria 4934
220 Ga0496113_0216573 3300048916 Bacteria 1525
221 Ga0496114_0203898 3300048917 Bacteria 1733
222 Ga0496115_0224662 3300048918 Bacteria 1549
223 Ga0501036_0011105 3300049572 Bacteria 7448
224 Ga0501039_0069137 3300049575 Bacteria 2742
225 Ga0501040_0407290 3300049576 Bacteria 977
226 Ga0501040_0484632 3300049576 Bacteria 891
227 Ga0501041_0067851 3300049577 Bacteria 2186
228 Ga0501042_0057482 3300049578 Bacteria 2776
229 Ga0501046_0090013 3300049580 Bacteria 2361
230 Ga0501067_0095491 3300049583 Bacteria 1651
231 Ga0501067_0193533 3300049583 Bacteria 1133
232 Ga0501069_0484650 3300049585 Bacteria 737
233 Ga0501071_0022340 3300049587 Bacteria 4411
234 Ga0501072_0081966 3300049588 Bacteria 2557
235 Ga0501075_0005515 3300049591 Bacteria 8656
236 Ga0501076_0008061 3300049592 Bacteria 7697
237 Ga0501076_0012968 3300049592 Bacteria 6239
238 Ga0501202_010385 3300049652 Bacteria 1727
239 Ga0501206_011284 3300049653 Bacteria 1205
240 Ga0501209_005652 3300049656 Bacteria 2274
241 Ga0501214_007211 3300049659 Bacteria 1131
242 Ga0501217_004122 3300049661 Bacteria 2978
243 Ga0501223_041762 3300049663 Bacteria 890
244 Ga0501224_024929 3300049664 Bacteria 894
245 Ga0501233_010678 3300049668 Bacteria 1814
246 Ga0501235_010299 3300049669 Bacteria 2044
247 Ga0501236_019434 3300049670 Bacteria 991
248 Ga0501238_049826 3300049671 Unclassified 627
249 Ga0501247_010962 3300049677 Bacteria 1087
250 Ga0501249_002577 3300049679 Bacteria 3653
251 Ga0501250_009802 3300049680 Bacteria 1086
252 Ga0501252_016926 3300049682 Bacteria 922
253 Ga0501257_032660 3300049686 Unclassified 1260
254 Ga0501221_036400 3300049704 Bacteria 1054
255 Ga0501225_0008022 3300049705 Bacteria 3042
256 Ga0501225_0098006 3300049705 Unclassified 854
257 Ga0501225_0159981 3300049705 Bacteria 692
258 Ga0501079_0062091 3300049741 Bacteria 2882
259 Ga0501080_0097076 3300049742 Bacteria 2736
260 Ga0501081_0014966 3300049743 Bacteria 5118
261 Ga0501083_0108668 3300049744 Bacteria 1824
262 Ga0501263_002592 3300049760 Bacteria 1861
263 Ga0501265_009713 3300049762 Bacteria 1167
264 Ga0501268_000725 3300049765 Bacteria 3764
265 Ga0501270_069988 3300049767 Unclassified 676
266 Ga0501275_006606 3300049772 Bacteria 1144
267 Ga0501283_019032 3300049779 Bacteria 1085
268 Ga0501035_0406594 3300049822 Unclassified 1132
269 Ga0501044_0701062 3300049823 Bacteria 898
270 Ga0501045_0011095 3300049824 Bacteria 6315
271 nmdc:mga05p37_1446688_c1 3300050507 Bacteria 688
272 nmdc:mga05p37_3878_c1 3300050507 Bacteria 17485
273 nmdc:mga09592_116562_c1 3300050508 Bacteria 2292
274 nmdc:mga09592_24507_c1 3300050508 Bacteria 4990
275 nmdc:mga0qj67_222618_c1 3300050509 Bacteria 1532
276 nmdc:mga0qj67_323021_c1 3300050509 Bacteria 1249
277 nmdc:mga06r32_150371_c1 3300050510 Bacteria 2306
278 nmdc:mga06r32_170668_c1 3300050510 Bacteria 2159
279 nmdc:mga0n895_11475_c1 3300050512 Bacteria 7906
280 nmdc:mga0rr50_72697_c1 3300050513 Bacteria 2627
281 nmdc:mga08x19_534291_c1 3300050514 Bacteria 829
282 nmdc:mga0a205_11804_c1 3300050515 Bacteria 5708
283 nmdc:mga0a205_41588_c1 3300050515 Bacteria 4426
284 Ga0501084_0024798 3300054114 Bacteria 5005
285 Ga0501084_0047217 3300054114 Bacteria 3606
286 Ga0590071_000089 3300059421 Bacteria 25178
287 Ga0590075_003940 3300059424 Bacteria 3517
288 Ga0590077_006683 3300059426 Bacteria 2361
289 Ga0501082_0072707 3300060353 Bacteria 2962
290 Ga0501082_0110423 3300060353 Bacteria 2380
291 Ga0530510_0025550 3300061734 Bacteria 4224
292 nmdc:mga06r32_217265_c1
293 MBSR1b_contig_2631385
294 Ga0065707_10268555
295 Ga0070690_100145882
296 Ga0070670_100183720
297 Ga0070687_100207977
298 Ga0070661_100273255
299 Ga0070668_100023479
300 Ga0070675_100017517
301 Ga0070671_100005236
302 Ga0070673_100121864
303 Ga0070659_100173334
304 Ga0070667_100240390
305 Ga0070667_100393282
306 Ga0070694_100069483
307 Ga0070708_100027440
308 Ga0070708_100126697
309 Ga0070708_100165444
310 Ga0070708_100327055
311 Ga0070662_100274542
312 Ga0070706_100132740
313 Ga0070707_100790323
314 Ga0070698_100003812
315 Ga0070698_100182465
316 Ga0070699_100000092
317 Ga0070699_100001718
318 Ga0070699_100004226
319 Ga0070699_100562850
320 Ga0070679_101031136
321 Ga0070697_100032607
322 Ga0070697_100131041
323 Ga0070697_100387636
324 Ga0070672_100078606
325 Ga0070672_100450390
326 Ga0070696_100044160
327 Ga0070665_100049907
328 Ga0070704_100247467
329 Ga0070664_100094444
330 Ga0068859_100082491
331 Ga0068859_100280204
332 Ga0068864_100009694
333 Ga0068861_100156275
334 Ga0068870_10281849
335 Ga0068863_100075341
336 Ga0068863_100145348
337 Ga0068860_101162524
338 Ga0068862_100318998
339 Ga0075428_100090560
340 Ga0075430_100109757
341 Ga0075430_100192936
342 Ga0075430_100237461
343 Ga0075431_100044517
344 Ga0075431_100224369
345 Ga0075433_10024734
346 Ga0075433_10070546
347 Ga0075433_10831695
348 Ga0075434_100013061
349 Ga0075429_100415538
350 Ga0068865_100041164
351 Ga0097620_100082489
352 Ga0097620_100280208
353 Ga0075435_100182648
354 Ga0075435_100584688
355 Ga0111539_10122783
356 Ga0105247_10531378
357 Ga0114129_10005047
358 Ga0114129_10420053
359 Ga0114129_10424704
360 Ga0105248_10448320
361 Ga0105248_10524995
362 Ga0105249_11315466
363 Ga0105239_10003670
364 Ga0105246_10256649
365 Ga0105246_10704797
366 Ga0157373_10872896
367 Ga0157375_10481813
368 Ga0157375_11178032
369 Ga0163163_10006214
370 Ga0163163_10022061
371 Ga0157380_10207435
372 Ga0157379_10015682
373 Ga0207682_10056576
374 Ga0207707_10167212
375 Ga0207646_10381218
376 Ga0207650_10439451
377 Ga0207659_10011324
378 Ga0207687_11072767
379 Ga0207644_10012336
380 Ga0207706_10624679
381 Ga0207691_10034706
382 Ga0207691_10139603
383 Ga0207711_10991664
384 Ga0207711_11234727
385 Ga0207679_10079668
386 Ga0207651_10021736
387 Ga0207668_10005727
388 Ga0207658_10361318
389 Ga0207639_10482838
390 Ga0207641_10068968
391 Ga0207641_10099574
392 Ga0207641_10813466
393 Ga0207676_10021516
394 Ga0207676_10312197
395 Ga0207676_10518632
396 Ga0207674_10004982
397 Ga0207675_100249753
398 Ga0207683_10117608
399 Ga0268266_10017792
400 Ga0268266_11428345
401 Ga0268265_10379581
402 Ga0307408_100043986
403 Ga0307408_100137197
404 Ga0307408_100161038
405 Ga0307408_100248158
406 Ga0307408_100388683
407 Ga0307408_100737233
408 Ga0307405_10026413
409 Ga0307405_10040961
410 Ga0307405_10226784
411 Ga0307413_10002474
412 Ga0307413_10004111
413 Ga0307413_10014424
414 Ga0307413_10108112
415 Ga0307413_10110002
416 Ga0307410_10000656
417 Ga0307410_10001510
418 Ga0307410_10002604
419 Ga0307410_10044904
420 Ga0307406_10007120
421 Ga0307406_10010174
422 Ga0307406_10079598
423 Ga0307407_10002124
424 Ga0307407_10006506
425 Ga0307407_10022021
426 Ga0307407_10159989
427 Ga0307407_10214685
428 Ga0307412_10153825
429 Ga0307412_10236079
430 Ga0307409_100003582
431 Ga0307409_100050968
432 Ga0307409_100086641
433 Ga0307409_100107683
434 Ga0307409_100232450
435 Ga0307409_100563852
436 Ga0307416_100002676
437 Ga0307416_100007187
438 Ga0307416_100009660
439 Ga0307416_100056143
440 Ga0307416_100180854
441 Ga0307416_100215782
442 Ga0307414_10010839
443 Ga0307414_10021287
444 Ga0307414_10086350
445 Ga0307414_10086750
446 Ga0307414_10153019
447 Ga0307414_10234368
448 Ga0307414_10266754
449 Ga0307411_10051420
450 Ga0307411_10075510
451 Ga0307411_10282339
452 Ga0307411_10456192
453 Ga0307415_100069234
454 Ga0307415_100081867
455 Ga0307415_100102214
456 Ga0373928_0016002
457 Ga0373940_0044404
458 Ga0373940_0050673
459 Ga0373960_0037073
460 Ga0373931_0042452
461 Ga0395900_0504321
462 Ga0395898_0496531
463 Ga0395905_0035120
464 Ga0395901_0133703
465 Ga0242420_002496
466 Ga0450896_014127
467 Ga0439446_0053486
468 Ga0439446_0068867
469 Ga0439446_0082595
470 Ga0451577_0006182
471 Ga0451577_0210756
472 Ga0451577_0215708
473 Ga0453683_0079250
474 Ga0453683_0091948
475 Ga0453683_0154652
476 Ga0453684_0881969
477 Ga0496100_0451289
478 Ga0496101_0024589
479 Ga0496102_0079291
480 Ga0496102_0226797
481 Ga0496103_0009400
482 Ga0496103_0029361
483 Ga0496104_0004117
484 Ga0496104_0047575
485 Ga0496104_0055128
486 Ga0496104_0227048
487 Ga0496105_0044843
488 Ga0496105_0158375
489 Ga0496105_0243340
490 Ga0496106_0030609
491 Ga0496106_0172440
492 Ga0496106_0253300
493 Ga0496107_0156270
494 Ga0496108_0001855
495 Ga0496108_0005399
496 Ga0496108_0015552
497 Ga0496109_0002332
498 Ga0496109_0024075
499 Ga0496109_0049322
500 Ga0496109_0051921
501 Ga0496110_0007426
502 Ga0496110_0007735
503 Ga0496110_0122353
504 Ga0496111_0117529
505 Ga0496111_0151097
506 Ga0496112_0003064
507 Ga0496112_0006942
508 Ga0496112_0021827
509 Ga0496113_0002060
510 Ga0496113_0017841
511 Ga0496113_0216573
512 Ga0496114_0203898
513 Ga0496115_0224662
514 Ga0501036_0011105
515 Ga0501039_0069137
516 Ga0501040_0407290
517 Ga0501040_0484632
518 Ga0501041_0067851
519 Ga0501042_0057482
520 Ga0501046_0090013
521 Ga0501067_0095491
522 Ga0501067_0193533
523 Ga0501069_0484650
524 Ga0501071_0022340
525 Ga0501072_0081966
526 Ga0501075_0005515
527 Ga0501076_0008061
528 Ga0501076_0012968
529 Ga0501202_010385
530 Ga0501206_011284
531 Ga0501209_005652
532 Ga0501214_007211
533 Ga0501217_004122
534 Ga0501223_041762
535 Ga0501224_024929
536 Ga0501233_010678
537 Ga0501235_010299
538 Ga0501236_019434
539 Ga0501238_049826
540 Ga0501247_010962
541 Ga0501249_002577
542 Ga0501250_009802
543 Ga0501252_016926
544 Ga0501257_032660
545 Ga0501221_036400
546 Ga0501225_0008022
547 Ga0501225_0098006
548 Ga0501225_0159981
549 Ga0501079_0062091
550 Ga0501080_0097076
551 Ga0501081_0014966
552 Ga0501083_0108668
553 Ga0501263_002592
554 Ga0501265_009713
555 Ga0501268_000725
556 Ga0501270_069988
557 Ga0501275_006606
558 Ga0501283_019032
559 Ga0501035_0406594
560 Ga0501044_0701062
561 Ga0501045_0011095
562 nmdc:mga05p37_1446688_c1
563 nmdc:mga05p37_3878_c1
564 nmdc:mga09592_116562_c1
565 nmdc:mga09592_24507_c1
566 nmdc:mga0qj67_222618_c1
567 nmdc:mga0qj67_323021_c1
568 nmdc:mga06r32_150371_c1
569 nmdc:mga06r32_170668_c1
570 nmdc:mga0n895_11475_c1
571 nmdc:mga0rr50_72697_c1
572 nmdc:mga08x19_534291_c1
573 nmdc:mga0a205_11804_c1
574 nmdc:mga0a205_41588_c1
575 Ga0501084_0024798
576 Ga0501084_0047217
577 Ga0590071_000089
578 Ga0590075_003940
579 Ga0590077_006683
580 Ga0501082_0072707
581 Ga0501082_0110423
582 Ga0530510_0025550

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00677

Lum_binding

Lumazine binding domain

97

182

0.95

PF00677

Lum_binding

Lumazine binding domain

3

84

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1pkv-assembly1.cif.gz_B the n-terminal domain of riboflavin synthase in complex with riboflavin 0.9681 1 84
4g6i-assembly1.cif.gz_B crystallographic structure of trimeric riboflavin synthase from brucella abortus in complex with roseoflavin 0.9678 1 194
4fxu-assembly1.cif.gz_A crystallographic structure of trimeric riboflavin synthase from brucella abortus 0.9665 1 193
4gqn-assembly1.cif.gz_C crystallographic structure of trimeric riboflavin synthase from brucella abortus in complex with 5-nitro-6-(d-ribitylamino)-2,4(1h,3h) pyrimidinedione 0.9654 1 193
4fxu-assembly1.cif.gz_A crystallographic structure of trimeric riboflavin synthase from brucella abortus 0.9568 1 193
ID Description Score Start End Superfamily
af_Q2FXG0_1_88_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9638 1 86 2.40.30.20
af_Q2FXG0_101_204_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9622 99 196 2.40.30.20
4fxuA01 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9611 1 86 2.40.30.20
4fxuC02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9573 99 188 2.40.30.20
af_P9WK35_1_88_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9571 1 85 2.40.30.20
ID Description Score Start End GO Terms
AF-A0A7W0JXI9-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.992 1 197 GO:0004746
GO:0009231
AF-A0A7W1KLA5-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9914 1 196 GO:0004746
GO:0009231
AF-A0A7W0WLM6-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9898 1 154 GO:0004746
GO:0009231
AF-A0A2V7RBB7-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9884 1 195 GO:0004746
GO:0009231
AF-A0A1Q7E8S8-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9874 27 195 GO:0004746
GO:0009231

Map