F390144

General Info

Members Datasets Scaffolds Average Seq Length
291 193 276 515

Family's Representative Sequence

Representative Sequence 3300005290|Ga0065712_10101421|Ga0065712_101014212
Length 555
Sequence MRKGKARRIEVMDTTLRDGEQAEGISMMPEEKRTIAQRLLETVKVDRIEVASARVSEGERRAVKAIVDYADTKGWTDRIEILGFVDGNQSVDWARSVGARVINLLTKGSLHHCREQLRKSHAQHIDDIRRTIEYGAKNGITFNVYLEDWSGGMIGGVGYVDEHIEALLGMPVRRIMLPDTLGLLSPPQVREFVGRLVSMFPDRHFDFHGHNDYGLGTANTLEAAIAGAHGVHVTVNGMGERAGNVTLDEVVVALRDHAGVATRVDERALSEVSRLVEVFSGRRVPANKPIVGENVFTQTAGIHADGDMKGNLYESRLTPARFGQHRTYAMGKLMGKASLDFNLERLNITLSPEQKQQLVARIVELGDQKKSVTQSDLPFLISEVLQTRDLRVFEVKDFSVVSNRGLRPTATILVRFRDREFHATGFGDGGYDAFMQALKSIERQLGFELPKLLDYEVRIPPGGKTDALVETTIKWEGGMKTRGVHSDQLAAAIQATEHALNMIALRSAPNHTKGRERRGKGQSTVIAHPSPLTPMSKQRSHGPTRHKKVVNARRG

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
3 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
4 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
5 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
6 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
7 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
8 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
9 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
10 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
11 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
12 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
13 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
16 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
17 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
18 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
19 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
20 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
21 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
23 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
28 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
29 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
30 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
31 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
32 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
33 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
34 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
35 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
36 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
37 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
44 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
51 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
75 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
76 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
79 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
81 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
82 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
107 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
108 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
109 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
110 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
111 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
112 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
113 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
114 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
117 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
118 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
119 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
120 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
121 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
122 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
123 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
124 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
126 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
127 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
128 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
129 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
130 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
131 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
132 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
133 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
134 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
135 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
136 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
137 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
138 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
139 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
140 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
141 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
142 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
143 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
144 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
145 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
146 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
147 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
159 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
160 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
161 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
162 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
163 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
164 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
165 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
166 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
167 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
168 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
169 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
170 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
171 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
172 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
173 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
174 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
175 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
179 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
180 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
181 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
182 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
183 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
184 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
185 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
186 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
187 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
188 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
189 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
190 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
191 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
192 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified
193 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.07
Metatranscriptomes 3.78
Isolates 5.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.87
Nodule 0
Rhizoplane 0
Rhizosphere 84.19
Stem 0
Stem Tuber 0
Unclassified 8.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10088319 3300003320 Bacteria 2113
2 rootH1_10029236 3300003323 Bacteria 5684
3 JGI25160J50197_1001164 3300003354 Bacteria 13428
4 Ga0055535_1002708 3300003761 Bacteria 5742
5 Ga0055542_1004171 3300003762 Bacteria 3622
6 Ga0065714_10100989 3300005288 Bacteria 1653
7 Ga0065712_10101421 3300005290 Unclassified 2025
8 Ga0065715_10148866 3300005293 Bacteria 1753
9 Ga0065707_10084360 3300005295 Bacteria 7300
10 Ga0065707_10093626 3300005295 Unclassified 3601
11 Ga0070658_10053679 3300005327 Bacteria 3271
12 Ga0070670_100147229 3300005331 Bacteria 2038
13 Ga0068869_100111519 3300005334 Bacteria 2082
14 Ga0070680_100003849 3300005336 Bacteria 11216
15 Ga0070682_100030575 3300005337 Bacteria 3252
16 Ga0068868_100012494 3300005338 Bacteria 6210
17 Ga0070660_100000519 3300005339 Bacteria 25704
18 Ga0070668_100088051 3300005347 Bacteria 2444
19 Ga0070669_100074791 3300005353 Bacteria 2511
20 Ga0070669_100115951 3300005353 Bacteria 2038
21 Ga0070671_100037583 3300005355 Bacteria 4015
22 Ga0070674_100017195 3300005356 Bacteria 4544
23 Ga0070673_100123196 3300005364 Bacteria 2166
24 Ga0070673_100198119 3300005364 Bacteria 1728
25 Ga0070688_100010290 3300005365 Bacteria 5152
26 Ga0070700_100034596 3300005441 Bacteria 3053
27 Ga0070678_100027843 3300005456 Bacteria 3843
28 Ga0070662_100000138 3300005457 Bacteria 41256
29 Ga0070681_10006021 3300005458 Bacteria 11752
30 Ga0068867_100017749 3300005459 Bacteria 5052
31 Ga0070679_100011061 3300005530 Bacteria 8584
32 Ga0070679_100016584 3300005530 Bacteria 7112
33 Ga0070684_100034081 3300005535 Bacteria 4352
34 Ga0070672_100002657 3300005543 Bacteria 11418
35 Ga0070665_100134483 3300005548 Bacteria 2474
36 Ga0068855_100150011 3300005563 Bacteria 2651
37 Ga0068857_100127187 3300005577 Bacteria 2297
38 Ga0068857_100165215 3300005577 Bacteria 2010
39 Ga0068856_100163141 3300005614 Bacteria 2240
40 Ga0068852_100007671 3300005616 Bacteria 7894
41 Ga0068859_100012199 3300005617 Bacteria 8639
42 Ga0068859_100029810 3300005617 Bacteria 5474
43 Ga0068866_10023029 3300005718 Bacteria 2892
44 Ga0068866_10044078 3300005718 Bacteria 2230
45 Ga0068861_100101720 3300005719 Bacteria 2286
46 Ga0068861_100112449 3300005719 Bacteria 2183
47 Ga0068860_100059226 3300005843 Bacteria 3642
48 Ga0068860_100081334 3300005843 Bacteria 3081
49 Ga0068862_100016024 3300005844 Bacteria 6233
50 Ga0097621_100008959 3300006237 Bacteria 7238
51 Ga0068871_100018128 3300006358 Bacteria 5345
52 Ga0075428_100000004 3300006844 Bacteria 326694
53 Ga0068865_100089018 3300006881 Bacteria 2235
54 Ga0097620_100012199 3300006931 Bacteria 8639
55 Ga0097620_100029812 3300006931 Bacteria 5474
56 Ga0105240_10254061 3300009093 Bacteria 2031
57 Ga0111539_10000005 3300009094 Bacteria 467342
58 Ga0111539_10009641 3300009094 Bacteria 12188
59 Ga0114129_10037618 3300009147 Bacteria 6832
60 Ga0105241_10000266 3300009174 Bacteria 38895
61 Ga0105241_10085937 3300009174 Bacteria 2473
62 Ga0105241_10104690 3300009174 Bacteria 2255
63 Ga0105242_10025603 3300009176 Bacteria 4671
64 Ga0105242_10032858 3300009176 Bacteria 4151
65 Ga0105242_10063807 3300009176 Bacteria 3034
66 Ga0105237_10000247 3300009545 Bacteria 76464
67 Ga0105237_10000713 3300009545 Bacteria 45969
68 Ga0105237_10015242 3300009545 Bacteria 8008
69 Ga0105249_10018570 3300009553 Bacteria 6189
70 Ga0105249_10074226 3300009553 Bacteria 3148
71 Ga0157373_10000990 3300013100 Bacteria 21976
72 Ga0157371_10061184 3300013102 Bacteria 2670
73 Ga0157371_10080717 3300013102 Bacteria 2303
74 Ga0157370_10001900 3300013104 Bacteria 25710
75 Ga0157370_10002424 3300013104 Bacteria 22485
76 Ga0157370_10023852 3300013104 Bacteria 6068
77 Ga0157370_10082453 3300013104 Bacteria 3025
78 Ga0157370_10148667 3300013104 Bacteria 2181
79 Ga0157374_10000103 3300013296 Bacteria 78532
80 Ga0157378_10033371 3300013297 Bacteria 4549
81 Ga0163162_10027688 3300013306 Bacteria 5606
82 Ga0157372_10001665 3300013307 Bacteria 24081
83 Ga0157372_10004334 3300013307 Bacteria 15167
84 Ga0157372_10049611 3300013307 Bacteria 4668
85 Ga0157372_10060140 3300013307 Bacteria 4251
86 Ga0157380_10069403 3300014326 Bacteria 2843
87 Ga0182008_10000358 3300014497 Bacteria 35490
88 Ga0163161_10005739 3300017792 Bacteria 8601
89 Ga0209258_100068 3300025242 Bacteria 286288
90 Ga0209148_1000259 3300025254 Bacteria 82912
91 Ga0209130_1008318 3300025284 Bacteria 3074
92 Ga0209564_1009209 3300025295 Bacteria 4737
93 Ga0209758_1037505 3300025297 Bacteria 1872
94 Ga0207426_1000135 3300025302 Bacteria 202216
95 Ga0207426_1000192 3300025302 Bacteria 151680
96 Ga0207642_10032124 3300025899 Bacteria 2207
97 Ga0207647_10000058 3300025904 Bacteria 84631
98 Ga0207654_10000537 3300025911 Bacteria 21711
99 Ga0207707_10008874 3300025912 Bacteria 8731
100 Ga0207695_10005568 3300025913 Bacteria 16636
101 Ga0207671_10002550 3300025914 Bacteria 19358
102 Ga0207671_10011232 3300025914 Bacteria 7306
103 Ga0207660_10076970 3300025917 Bacteria 2441
104 Ga0207657_10002923 3300025919 Bacteria 18338
105 Ga0207657_10022197 3300025919 Bacteria 5952
106 Ga0207652_10011611 3300025921 Bacteria 7106
107 Ga0207652_10024391 3300025921 Bacteria 5018
108 Ga0207652_10046318 3300025921 Bacteria 3710
109 Ga0207690_10090869 3300025932 Bacteria 2157
110 Ga0207706_10000147 3300025933 Bacteria 76792
111 Ga0207706_10073912 3300025933 Bacteria 2998
112 Ga0207706_10109519 3300025933 Bacteria 2430
113 Ga0207706_10120091 3300025933 Bacteria 2311
114 Ga0207686_10033371 3300025934 Bacteria 3073
115 Ga0207669_10010692 3300025937 Bacteria 4429
116 Ga0207704_10011130 3300025938 Bacteria 4416
117 Ga0207704_10082003 3300025938 Bacteria 2088
118 Ga0207689_10005654 3300025942 Bacteria 11129
119 Ga0207689_10019455 3300025942 Bacteria 5722
120 Ga0207689_10026124 3300025942 Bacteria 4890
121 Ga0207689_10151210 3300025942 Bacteria 1913
122 Ga0207667_10001061 3300025949 Bacteria 34836
123 Ga0207702_10138157 3300026078 Bacteria 2201
124 Ga0207648_10003786 3300026089 Bacteria 15802
125 Ga0207648_10012188 3300026089 Bacteria 8053
126 Ga0207674_10000813 3300026116 Bacteria 40546
127 Ga0207674_10004651 3300026116 Bacteria 16474
128 Ga0207675_100001094 3300026118 Bacteria 26845
129 Ga0207675_100028922 3300026118 Bacteria 5163
130 Ga0207675_100035473 3300026118 Bacteria 4652
131 Ga0207683_10027991 3300026121 Bacteria 4872
132 Ga0207698_10026147 3300026142 Bacteria 4125
133 Ga0207428_10000024 3300027907 Bacteria 265587
134 Ga0268266_10026091 3300028379 Bacteria 4971
135 Ga0265327_10004854 3300031251 Bacteria 11638
136 Ga0307509_10026121 3300031507 Bacteria 6515
137 Ga0307508_10016147 3300031616 Bacteria 6799
138 Ga0316575_10001755 3300031665 Bacteria 7098
139 Ga0316579_10003795 3300031691 Bacteria 5948
140 Ga0316579_10005446 3300031691 Bacteria 5139
141 Ga0316576_10000011 3300031727 Bacteria 51505
142 Ga0316576_10003359 3300031727 Bacteria 9360
143 Ga0316576_10018992 3300031727 Bacteria 4703
144 Ga0316576_10021852 3300031727 Bacteria 4433
145 Ga0316576_10030109 3300031727 Bacteria 3841
146 Ga0316576_10082401 3300031727 Bacteria 2388
147 Ga0316578_10000039 3300031728 Bacteria 26902
148 Ga0316578_10000787 3300031728 Bacteria 11719
149 Ga0316578_10000986 3300031728 Bacteria 10856
150 Ga0316578_10001439 3300031728 Bacteria 9657
151 Ga0316578_10026631 3300031728 Bacteria 3262
152 Ga0316578_10028865 3300031728 Bacteria 3144
153 Ga0316578_10040513 3300031728 Bacteria 2693
154 Ga0316578_10063110 3300031728 Bacteria 2185
155 Ga0307405_10055738 3300031731 Bacteria 2475
156 Ga0316577_10000002 3300031733 Bacteria 69178
157 Ga0316577_10006862 3300031733 Bacteria 6046
158 Ga0316577_10024124 3300031733 Bacteria 3380
159 Ga0316577_10055041 3300031733 Bacteria 2220
160 Ga0307410_10005134 3300031852 Bacteria 6883
161 Ga0307414_10000133 3300032004 Bacteria 51805
162 Ga0307414_10065218 3300032004 Bacteria 2597
163 Ga0307411_10000003 3300032005 Bacteria 477556
164 Ga0316583_10009006 3300032133 Bacteria 3598
165 Ga0316583_10019796 3300032133 Bacteria 2413
166 Ga0316585_10000786 3300032137 Bacteria 8006
167 Ga0316585_10010836 3300032137 Bacteria 2679
168 Ga0316580_10000015 3300032139 Bacteria 26419
169 Ga0316580_10003248 3300032139 Bacteria 4591
170 Ga0316580_10004642 3300032139 Bacteria 3989
171 Ga0316580_10010140 3300032139 Bacteria 2839
172 Ga0316593_10003712 3300032168 Bacteria 3830
173 Ga0316593_10006143 3300032168 Bacteria 3226
174 Ga0316593_10013361 3300032168 Bacteria 2430
175 Ga0316592_1000229 3300033524 Bacteria 6870
176 Ga0316592_1000492 3300033524 Bacteria 5511
177 Ga0316588_1000486 3300033528 Bacteria 5402
178 Ga0316588_1000582 3300033528 Bacteria 5169
179 Ga0316588_1002614 3300033528 Bacteria 3158
180 Ga0316587_1001435 3300033529 Bacteria 2935
181 Ga0316596_1000900 3300033541 Bacteria 5614
182 Ga0316596_1002635 3300033541 Bacteria 3848
183 Ga0316574_0000015 3300035398 Bacteria 41741
184 Ga0316574_0000285 3300035398 Bacteria 18994
185 Ga0316574_0007321 3300035398 Bacteria 6044
186 Ga0316582_0000010 3300036647 Bacteria 42857
187 Ga0316582_0026283 3300036647 Bacteria 3503
188 Ga0316584_0000074 3300036712 Bacteria 39825
189 Ga0316584_0013756 3300036712 Bacteria 5736
190 Ga0316584_0014701 3300036712 Bacteria 5583
191 Ga0316584_0018014 3300036712 Bacteria 5089
192 Ga0316584_0026142 3300036712 Bacteria 4288
193 Ga0316584_0040206 3300036712 Bacteria 3484
194 Ga0395899_0000888 3300037312 Bacteria 28385
195 Ga0395900_0000226 3300037418 Bacteria 88588
196 Ga0395898_0037363 3300037466 Bacteria 4818
197 Ga0395905_0000068 3300037471 Bacteria 177163
198 Ga0395905_0000380 3300037471 Bacteria 63103
199 Ga0395905_0015085 3300037471 Bacteria 7355
200 Ga0395901_0000136 3300038443 Bacteria 95382
201 Ga0395901_0002155 3300038443 Bacteria 20107
202 Ga0400490_07322 3300038726 Bacteria 19085
203 Ga0400490_41039 3300038726 Bacteria 20890
204 Ga0400488_02059 3300038741 Bacteria 6536
205 Ga0400488_12462 3300038741 Bacteria 5011
206 Ga0400483_007842 3300039062 Bacteria 6178
207 Ga0400483_067607 3300039062 Bacteria 5346
208 Ga0400483_091932 3300039062 Bacteria 2628
209 Ga0400483_207491 3300039062 Bacteria 2174
210 Ga0400483_212739 3300039062 Bacteria 2462
211 Ga0400483_264462 3300039062 Bacteria 7145
212 Ga0400483_271297 3300039062 Bacteria 3478
213 Ga0400489_76532 3300039093 Bacteria 9027
214 Ga0400487_19366 3300039110 Bacteria 2185
215 Ga0400487_48192 3300039110 Bacteria 5042
216 Ga0451837_0984329 3300041494 Bacteria 1901
217 Ga0451577_0000196 3300042876 Bacteria 126516
218 Ga0451577_0000584 3300042876 Bacteria 58655
219 Ga0453684_0000549 3300044712 Bacteria 141927
220 Ga0453684_0000821 3300044712 Bacteria 105082
221 Ga0453684_0257373 3300044712 Bacteria 2001
222 Ga0466968_0025540 3300044735 Bacteria 2419
223 Ga0451576_0235818 3300045051 Bacteria 1911
224 Ga0495687_001458 3300047443 Bacteria 21705
225 Ga0495686_0032744 3300047472 Bacteria 3362
226 Ga0501298_004369 3300049521 Bacteria 2225
227 Ga0501033_0104858 3300049570 Unclassified 2061
228 Ga0501034_0006964 3300049571 Bacteria 12076
229 Ga0501036_0023555 3300049572 Bacteria 5188
230 Ga0501036_0112341 3300049572 Unclassified 2302
231 Ga0501039_0096448 3300049575 Bacteria 2305
232 Ga0501040_0013419 3300049576 Bacteria 5384
233 Ga0501041_0010001 3300049577 Bacteria 5589
234 Ga0501043_0027430 3300049579 Unclassified 4471
235 Ga0501043_0037420 3300049579 Bacteria 3817
236 Ga0501046_0012460 3300049580 Bacteria 7238
237 Ga0501048_0045600 3300049582 Unclassified 3131
238 Ga0501068_0067882 3300049584 Unclassified 2173
239 Ga0501072_0052888 3300049588 Unclassified 3197
240 Ga0501075_0012700 3300049591 Bacteria 5991
241 Ga0501075_0031667 3300049591 Bacteria 3927
242 Ga0501076_0011281 3300049592 Bacteria 6650
243 Ga0501077_0011992 3300049593 Bacteria 5424
244 Ga0501201_000845 3300049651 Bacteria 2879
245 Ga0501202_000061 3300049652 Bacteria 11286
246 Ga0501207_002242 3300049654 Bacteria 2483
247 Ga0501217_000093 3300049661 Bacteria 11107
248 Ga0501223_000324 3300049663 Bacteria 11920
249 Ga0501233_001018 3300049668 Bacteria 4765
250 Ga0501243_002564 3300049675 Bacteria 2670
251 Ga0501259_000384 3300049688 Bacteria 6988
252 Ga0501225_0010478 3300049705 Bacteria 2624
253 Ga0501234_000293 3300049707 Bacteria 7341
254 Ga0501080_0108927 3300049742 Unclassified 2567
255 Ga0501081_0007631 3300049743 Bacteria 7016
256 Ga0501081_0018576 3300049743 Bacteria 4620
257 Ga0501266_000001 3300049763 Bacteria 562004
258 Ga0501279_002281 3300049775 Bacteria 2522
259 Ga0501035_0031609 3300049822 Bacteria 4821
260 Ga0501045_0012123 3300049824 Bacteria 6066
261 Ga0501045_0022910 3300049824 Bacteria 4474
262 nmdc:mga09592_39067_c1 3300050508 Bacteria 3986
263 nmdc:mga06r32_6301_c1 3300050510 Bacteria 10654
264 nmdc:mga08y16_6_c1 3300050511 Bacteria 622294
265 Ga0500644_0000268 3300053088 Bacteria 29387
266 Ga0500583_0003570 3300053092 Bacteria 4922
267 Ga0500569_000198 3300053109 Bacteria 9557
268 Ga0500658_0000001 3300053134 Bacteria 592738
269 Ga0500559_0021774 3300053136 Bacteria 2718
270 Ga0500577_0006907 3300053142 Bacteria 3154
271 Ga0500588_0001234 3300053146 Bacteria 4752
272 Ga0500616_0014594 3300053153 Bacteria 4510
273 Ga0500633_0000165 3300053160 Bacteria 8892
274 Ga0500636_0020192 3300053177 Bacteria 3942
275 Ga0501082_0003816 3300060353 Bacteria 13175
276 Ga0530510_0059840 3300061734 Bacteria 2756

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049584 Ga0501068_0067882 Ga0501068_0067882_10_1299 372
2 3300060353 Ga0501082_0003816 Ga0501082_0003816_11876_13165 372
3 3300041494 Ga0451837_0984329 Ga0451837_0984329_11_1276 388
4 3300049576 Ga0501040_0013419 Ga0501040_0013419_3923_5365 423
5 3300049742 Ga0501080_0108927 Ga0501080_0108927_1046_2557 446
6 3300049570 Ga0501033_0104858 Ga0501033_0104858_110_1666 460
7 3300049572 Ga0501036_0112341 Ga0501036_0112341_161_1717 461
8 3300049577 Ga0501041_0010001 Ga0501041_0010001_645_2201 461
9 3300049579 Ga0501043_0027430 Ga0501043_0027430_2288_3844 461
10 3300049580 Ga0501046_0012460 Ga0501046_0012460_4585_6141 461
11 3300049582 Ga0501048_0045600 Ga0501048_0045600_1013_2569 461
12 3300049588 Ga0501072_0052888 Ga0501072_0052888_1466_3022 461
13 3300049591 Ga0501075_0012700 Ga0501075_0012700_3964_5520 461
14 3300049592 Ga0501076_0011281 Ga0501076_0011281_760_2316 461
15 3300049593 Ga0501077_0011992 Ga0501077_0011992_136_1692 461
16 3300049743 Ga0501081_0007631 Ga0501081_0007631_1374_2930 461
17 3300049824 Ga0501045_0012123 Ga0501045_0012123_3404_4960 461
18 3300025899 Ga0207642_10032124 Ga0207642_100321242 463
19 3300042876 Ga0451577_0000584 Ga0451577_0000584_17684_19303 473
20 3300044712 Ga0453684_0000549 Ga0453684_0000549_70576_72195 473
21 3300005339 Ga0070660_100000519 Ga0070660_1000005198 475
22 3300025919 Ga0207657_10002923 Ga0207657_100029239 475
23 iso_pu_bacteria 2884634485 2884636220 482
24 iso_pu_bacteria 2883068021 2883068635 484
25 3300039110 Ga0400487_19366 Ga0400487_19366_377_1963 485
26 3300032004 Ga0307414_10000133 Ga0307414_1000013321 486
27 3300039062 Ga0400483_067607 Ga0400483_067607_703_2214 486
28 3300042876 Ga0451577_0000196 Ga0451577_0000196_96779_98290 486
29 3300044712 Ga0453684_0000821 Ga0453684_0000821_8996_10507 486
30 3300005535 Ga0070684_100034081 Ga0070684_1000340813 488
31 3300005614 Ga0068856_100163141 Ga0068856_1001631412 488
32 3300009147 Ga0114129_10037618 Ga0114129_100376185 488
33 3300009545 Ga0105237_10015242 Ga0105237_100152425 488
34 3300013102 Ga0157371_10061184 Ga0157371_100611842 488
35 3300013104 Ga0157370_10082453 Ga0157370_100824531 488
36 3300025914 Ga0207671_10002550 Ga0207671_1000255016 488
37 3300025949 Ga0207667_10001061 Ga0207667_1000106116 488
38 3300026078 Ga0207702_10138157 Ga0207702_101381572 488
39 3300026116 Ga0207674_10000813 Ga0207674_100008138 488
40 3300032004 Ga0307414_10065218 Ga0307414_100652182 488
41 3300047472 Ga0495686_0032744 Ga0495686_0032744_1841_3334 488
42 3300049571 Ga0501034_0006964 Ga0501034_0006964_483_1991 488
43 3300049579 Ga0501043_0037420 Ga0501043_0037420_2038_3546 488
44 3300049775 Ga0501279_002281 Ga0501279_002281_1016_2509 488
45 3300049822 Ga0501035_0031609 Ga0501035_0031609_299_1792 488
46 3300050508 nmdc:mga09592_39067_c1 nmdc:mga09592_39067_c1_2188_3681 488
47 3300050510 nmdc:mga06r32_6301_c1 nmdc:mga06r32_6301_c1_1069_2562 488
48 3300053146 Ga0500588_0001234 Ga0500588_0001234_2406_3899 488
49 iso_pu_bacteria 2919692658 2919696153 491
50 iso_pu_bacteria 2522125168 2522552379 492
51 iso_pu_bacteria 2857618242 2857621633 492
52 iso_pu_bacteria 2894510363 2894511974 492
53 iso_pu_bacteria 2919186247 2919191458 492
54 iso_pu_bacteria 2939664404 2939669623 492
55 iso_pu_bacteria 2977268062 2977268227 492
56 iso_pu_bacteria 2989392574 2989392591 492
57 iso_pu_bacteria 8001522603 8001523155 492
58 iso_pu_bacteria 8055588893 8055591906 492
59 3300005290 Ga0065712_10101421 Ga0065712_101014212 493
60 3300005295 Ga0065707_10084360 Ga0065707_100843607 493
61 3300005295 Ga0065707_10093626 Ga0065707_100936263 493
62 3300005331 Ga0070670_100147229 Ga0070670_1001472292 493
63 3300005355 Ga0070671_100037583 Ga0070671_1000375835 493
64 3300005617 Ga0068859_100012199 Ga0068859_1000121994 493
65 3300005719 Ga0068861_100101720 Ga0068861_1001017202 493
66 3300005844 Ga0068862_100016024 Ga0068862_1000160247 493
67 3300006844 Ga0075428_100000004 Ga0075428_100000004112 493
68 3300006931 Ga0097620_100012199 Ga0097620_1000121994 493
69 3300009094 Ga0111539_10000005 Ga0111539_10000005180 493
70 3300009553 Ga0105249_10018570 Ga0105249_100185702 493
71 3300014326 Ga0157380_10069403 Ga0157380_100694033 493
72 3300025933 Ga0207706_10120091 Ga0207706_101200912 493
73 3300025937 Ga0207669_10010692 Ga0207669_100106925 493
74 3300026118 Ga0207675_100035473 Ga0207675_1000354736 493
75 3300027907 Ga0207428_10000024 Ga0207428_10000024114 493
76 3300049572 Ga0501036_0023555 Ga0501036_0023555_1581_3215 493
77 3300049591 Ga0501075_0031667 Ga0501075_0031667_1284_2918 493
78 3300049743 Ga0501081_0018576 Ga0501081_0018576_763_2397 493
79 3300049824 Ga0501045_0022910 Ga0501045_0022910_2482_4116 493
80 3300050511 nmdc:mga08y16_6_c1 nmdc:mga08y16_6_c1_387567_389186 493
81 3300061734 Ga0530510_0059840 Ga0530510_0059840_470_2104 493
82 3300031665 Ga0316575_10001755 Ga0316575_100017554 494
83 3300031691 Ga0316579_10003795 Ga0316579_100037954 494
84 3300031727 Ga0316576_10000011 Ga0316576_1000001127 494
85 3300031727 Ga0316576_10018992 Ga0316576_100189922 494
86 3300031728 Ga0316578_10000039 Ga0316578_1000003917 494
87 3300031728 Ga0316578_10001439 Ga0316578_100014396 494
88 3300031733 Ga0316577_10000002 Ga0316577_100000027 494
89 3300031733 Ga0316577_10024124 Ga0316577_100241243 494
90 3300032137 Ga0316585_10000786 Ga0316585_100007864 494
91 3300032139 Ga0316580_10000015 Ga0316580_1000001513 494
92 3300032168 Ga0316593_10006143 Ga0316593_100061433 494
93 3300033524 Ga0316592_1000229 Ga0316592_10002293 494
94 3300033528 Ga0316588_1000582 Ga0316588_10005822 494
95 3300033541 Ga0316596_1000900 Ga0316596_10009003 494
96 3300035398 Ga0316574_0000015 Ga0316574_0000015_29398_30966 494
97 3300036647 Ga0316582_0000010 Ga0316582_0000010_29405_30973 494
98 3300036712 Ga0316584_0000074 Ga0316584_0000074_10297_11865 494
99 3300036712 Ga0316584_0013756 Ga0316584_0013756_4001_5626 494
100 3300036712 Ga0316584_0018014 Ga0316584_0018014_1462_3030 494
101 iso_pu_bacteria 2929177148 2929180751 494
102 iso_pu_bacteria 2945977869 2945983147 494
103 iso_pu_bacteria 2946013367 2946017461 494
104 3300031251 Ga0265327_10004854 Ga0265327_100048543 495
105 3300031691 Ga0316579_10005446 Ga0316579_100054462 495
106 3300031727 Ga0316576_10003359 Ga0316576_100033592 495
107 3300031727 Ga0316576_10030109 Ga0316576_100301092 495
108 3300031727 Ga0316576_10082401 Ga0316576_100824012 495
109 3300031728 Ga0316578_10000787 Ga0316578_100007872 495
110 3300031728 Ga0316578_10000986 Ga0316578_100009862 495
111 3300031728 Ga0316578_10026631 Ga0316578_100266312 495
112 3300031728 Ga0316578_10028865 Ga0316578_100288652 495
113 3300031728 Ga0316578_10040513 Ga0316578_100405132 495
114 3300031733 Ga0316577_10006862 Ga0316577_100068623 495
115 3300031733 Ga0316577_10055041 Ga0316577_100550411 495
116 3300032133 Ga0316583_10009006 Ga0316583_100090062 495
117 3300032133 Ga0316583_10019796 Ga0316583_100197962 495
118 3300032137 Ga0316585_10010836 Ga0316585_100108362 495
119 3300032139 Ga0316580_10003248 Ga0316580_100032482 495
120 3300032139 Ga0316580_10004642 Ga0316580_100046422 495
121 3300032139 Ga0316580_10010140 Ga0316580_100101402 495
122 3300032168 Ga0316593_10003712 Ga0316593_100037122 495
123 3300032168 Ga0316593_10013361 Ga0316593_100133611 495
124 3300033524 Ga0316592_1000492 Ga0316592_10004922 495
125 3300033528 Ga0316588_1000486 Ga0316588_10004862 495
126 3300033528 Ga0316588_1002614 Ga0316588_10026142 495
127 3300033529 Ga0316587_1001435 Ga0316587_10014352 495
128 3300033541 Ga0316596_1002635 Ga0316596_10026351 495
129 3300035398 Ga0316574_0000285 Ga0316574_0000285_1190_2794 495
130 3300035398 Ga0316574_0007321 Ga0316574_0007321_3601_5337 495
131 3300036647 Ga0316582_0026283 Ga0316582_0026283_1470_3074 495
132 3300036712 Ga0316584_0014701 Ga0316584_0014701_1296_2900 495
133 3300036712 Ga0316584_0026142 Ga0316584_0026142_63_1709 495
134 3300036712 Ga0316584_0040206 Ga0316584_0040206_1559_3304 495
135 3300038726 Ga0400490_07322 Ga0400490_07322_4739_6274 495
136 3300038726 Ga0400490_41039 Ga0400490_41039_18130_19665 495
137 3300038741 Ga0400488_02059 Ga0400488_02059_4127_5662 495
138 3300038741 Ga0400488_12462 Ga0400488_12462_2084_3619 495
139 3300039062 Ga0400483_007842 Ga0400483_007842_2721_4268 495
140 3300039062 Ga0400483_091932 Ga0400483_091932_474_2009 495
141 3300039062 Ga0400483_207491 Ga0400483_207491_496_2043 495
142 3300039062 Ga0400483_212739 Ga0400483_212739_55_1602 495
143 3300039062 Ga0400483_264462 Ga0400483_264462_5533_7068 495
144 3300039062 Ga0400483_271297 Ga0400483_271297_1425_2966 495
145 3300039093 Ga0400489_76532 Ga0400489_76532_1526_3061 495
146 3300039110 Ga0400487_48192 Ga0400487_48192_1680_3215 495
147 3300045051 Ga0451576_0235818 Ga0451576_0235818_346_1890 495
148 3300003323 rootH1_10029236 rootH1_100292364 496
149 3300003354 JGI25160J50197_1001164 JGI25160J50197_10011646 496
150 3300005288 Ga0065714_10100989 Ga0065714_101009891 496
151 3300005336 Ga0070680_100003849 Ga0070680_1000038497 496
152 3300005458 Ga0070681_10006021 Ga0070681_100060218 496
153 3300005530 Ga0070679_100011061 Ga0070679_10001106110 496
154 3300009093 Ga0105240_10254061 Ga0105240_102540612 496
155 3300009174 Ga0105241_10085937 Ga0105241_100859372 496
156 3300009545 Ga0105237_10000247 Ga0105237_1000024762 496
157 3300009545 Ga0105237_10000713 Ga0105237_1000071334 496
158 3300013100 Ga0157373_10000990 Ga0157373_100009909 496
159 3300013104 Ga0157370_10002424 Ga0157370_1000242413 496
160 3300013104 Ga0157370_10023852 Ga0157370_100238524 496
161 3300013306 Ga0163162_10027688 Ga0163162_100276882 496
162 3300013307 Ga0157372_10060140 Ga0157372_100601404 496
163 3300014497 Ga0182008_10000358 Ga0182008_1000035814 496
164 3300017792 Ga0163161_10005739 Ga0163161_100057392 496
165 3300025302 Ga0207426_1000192 Ga0207426_100019234 496
166 3300025912 Ga0207707_10008874 Ga0207707_100088746 496
167 3300025914 Ga0207671_10011232 Ga0207671_100112323 496
168 3300025921 Ga0207652_10011611 Ga0207652_100116115 496
169 3300031727 Ga0316576_10021852 Ga0316576_100218523 496
170 3300031728 Ga0316578_10063110 Ga0316578_100631101 496
171 3300031731 Ga0307405_10055738 Ga0307405_100557382 496
172 3300031852 Ga0307410_10005134 Ga0307410_100051342 496
173 3300032005 Ga0307411_10000003 Ga0307411_1000000342 496
174 3300049663 Ga0501223_000324 Ga0501223_000324_1587_3104 496
175 3300049763 Ga0501266_000001 Ga0501266_000001_24085_25605 496
176 3300053134 Ga0500658_0000001 Ga0500658_0000001_426224_427744 496
177 3300053136 Ga0500559_0021774 Ga0500559_0021774_266_1786 496
178 3300003320 rootH2_10088319 rootH2_100883192 498
179 3300003761 Ga0055535_1002708 Ga0055535_10027087 498
180 3300003762 Ga0055542_1004171 Ga0055542_10041711 498
181 3300005293 Ga0065715_10148866 Ga0065715_101488661 498
182 3300005327 Ga0070658_10053679 Ga0070658_100536793 498
183 3300005334 Ga0068869_100111519 Ga0068869_1001115192 498
184 3300005337 Ga0070682_100030575 Ga0070682_1000305752 498
185 3300005338 Ga0068868_100012494 Ga0068868_1000124945 498
186 3300005347 Ga0070668_100088051 Ga0070668_1000880513 498
187 3300005353 Ga0070669_100074791 Ga0070669_1000747911 498
188 3300005353 Ga0070669_100115951 Ga0070669_1001159512 498
189 3300005356 Ga0070674_100017195 Ga0070674_1000171952 498
190 3300005364 Ga0070673_100123196 Ga0070673_1001231962 498
191 3300005364 Ga0070673_100198119 Ga0070673_1001981191 498
192 3300005365 Ga0070688_100010290 Ga0070688_1000102904 498
193 3300005441 Ga0070700_100034596 Ga0070700_1000345962 498
194 3300005456 Ga0070678_100027843 Ga0070678_1000278434 498
195 3300005457 Ga0070662_100000138 Ga0070662_1000001385 498
196 3300005459 Ga0068867_100017749 Ga0068867_1000177493 498
197 3300005530 Ga0070679_100016584 Ga0070679_1000165844 498
198 3300005543 Ga0070672_100002657 Ga0070672_1000026577 498
199 3300005548 Ga0070665_100134483 Ga0070665_1001344832 498
200 3300005563 Ga0068855_100150011 Ga0068855_1001500114 498
201 3300005577 Ga0068857_100127187 Ga0068857_1001271872 498
202 3300005577 Ga0068857_100165215 Ga0068857_1001652151 498
203 3300005616 Ga0068852_100007671 Ga0068852_1000076716 498
204 3300005617 Ga0068859_100029810 Ga0068859_1000298104 498
205 3300005718 Ga0068866_10023029 Ga0068866_100230292 498
206 3300005718 Ga0068866_10044078 Ga0068866_100440782 498
207 3300005719 Ga0068861_100112449 Ga0068861_1001124492 498
208 3300005843 Ga0068860_100059226 Ga0068860_1000592261 498
209 3300005843 Ga0068860_100081334 Ga0068860_1000813342 498
210 3300006237 Ga0097621_100008959 Ga0097621_1000089595 498
211 3300006358 Ga0068871_100018128 Ga0068871_1000181282 498
212 3300006881 Ga0068865_100089018 Ga0068865_1000890182 498
213 3300006931 Ga0097620_100029812 Ga0097620_1000298124 498
214 3300009094 Ga0111539_10009641 Ga0111539_100096414 498
215 3300009174 Ga0105241_10000266 Ga0105241_1000026619 498
216 3300009174 Ga0105241_10104690 Ga0105241_101046902 498
217 3300009176 Ga0105242_10025603 Ga0105242_100256034 498
218 3300009176 Ga0105242_10032858 Ga0105242_100328583 498
219 3300009176 Ga0105242_10063807 Ga0105242_100638073 498
220 3300009553 Ga0105249_10074226 Ga0105249_100742262 498
221 3300013102 Ga0157371_10080717 Ga0157371_100807172 498
222 3300013104 Ga0157370_10001900 Ga0157370_100019009 498
223 3300013104 Ga0157370_10148667 Ga0157370_101486672 498
224 3300013296 Ga0157374_10000103 Ga0157374_1000010347 498
225 3300013297 Ga0157378_10033371 Ga0157378_100333714 498
226 3300013307 Ga0157372_10001665 Ga0157372_100016652 498
227 3300013307 Ga0157372_10004334 Ga0157372_1000433413 498
228 3300013307 Ga0157372_10049611 Ga0157372_100496113 498
229 3300025242 Ga0209258_100068 Ga0209258_10006849 498
230 3300025254 Ga0209148_1000259 Ga0209148_100025948 498
231 3300025284 Ga0209130_1008318 Ga0209130_10083182 498
232 3300025295 Ga0209564_1009209 Ga0209564_10092092 498
233 3300025297 Ga0209758_1037505 Ga0209758_10375052 498
234 3300025302 Ga0207426_1000135 Ga0207426_1000135102 498
235 3300025904 Ga0207647_10000058 Ga0207647_100000589 498
236 3300025911 Ga0207654_10000537 Ga0207654_100005377 498
237 3300025913 Ga0207695_10005568 Ga0207695_1000556814 498
238 3300025917 Ga0207660_10076970 Ga0207660_100769702 498
239 3300025919 Ga0207657_10022197 Ga0207657_100221974 498
240 3300025921 Ga0207652_10024391 Ga0207652_100243914 498
241 3300025921 Ga0207652_10046318 Ga0207652_100463183 498
242 3300025932 Ga0207690_10090869 Ga0207690_100908692 498
243 3300025933 Ga0207706_10000147 Ga0207706_1000014724 498
244 3300025933 Ga0207706_10073912 Ga0207706_100739122 498
245 3300025933 Ga0207706_10109519 Ga0207706_101095191 498
246 3300025934 Ga0207686_10033371 Ga0207686_100333712 498
247 3300025938 Ga0207704_10011130 Ga0207704_100111305 498
248 3300025938 Ga0207704_10082003 Ga0207704_100820032 498
249 3300025942 Ga0207689_10005654 Ga0207689_100056548 498
250 3300025942 Ga0207689_10019455 Ga0207689_100194552 498
251 3300025942 Ga0207689_10026124 Ga0207689_100261245 498
252 3300025942 Ga0207689_10151210 Ga0207689_101512101 498
253 3300026089 Ga0207648_10003786 Ga0207648_100037863 498
254 3300026089 Ga0207648_10012188 Ga0207648_100121887 498
255 3300026116 Ga0207674_10004651 Ga0207674_100046519 498
256 3300026118 Ga0207675_100001094 Ga0207675_10000109422 498
257 3300026118 Ga0207675_100028922 Ga0207675_1000289222 498
258 3300026121 Ga0207683_10027991 Ga0207683_100279914 498
259 3300026142 Ga0207698_10026147 Ga0207698_100261473 498
260 3300028379 Ga0268266_10026091 Ga0268266_100260914 498
261 3300031507 Ga0307509_10026121 Ga0307509_100261213 498
262 3300031616 Ga0307508_10016147 Ga0307508_100161475 498
263 3300037312 Ga0395899_0000888 Ga0395899_0000888_8678_10201 498
264 3300037418 Ga0395900_0000226 Ga0395900_0000226_63831_65354 498
265 3300037466 Ga0395898_0037363 Ga0395898_0037363_1042_2565 498
266 3300037471 Ga0395905_0000068 Ga0395905_0000068_154969_156492 498
267 3300037471 Ga0395905_0000380 Ga0395905_0000380_37287_38810 498
268 3300037471 Ga0395905_0015085 Ga0395905_0015085_4512_6089 498
269 3300038443 Ga0395901_0000136 Ga0395901_0000136_85976_87499 498
270 3300038443 Ga0395901_0002155 Ga0395901_0002155_6407_7930 498
271 3300044712 Ga0453684_0257373 Ga0453684_0257373_90_1655 498
272 3300044735 Ga0466968_0025540 Ga0466968_0025540_249_1772 498
273 3300047443 Ga0495687_001458 Ga0495687_001458_18855_20378 498
274 3300049521 Ga0501298_004369 Ga0501298_004369_136_1749 498
275 3300049575 Ga0501039_0096448 Ga0501039_0096448_565_2091 498
276 3300049651 Ga0501201_000845 Ga0501201_000845_1097_2710 498
277 3300049652 Ga0501202_000061 Ga0501202_000061_6172_7785 498
278 3300049654 Ga0501207_002242 Ga0501207_002242_642_2255 498
279 3300049661 Ga0501217_000093 Ga0501217_000093_6185_7798 498
280 3300049668 Ga0501233_001018 Ga0501233_001018_1649_3262 498
281 3300049675 Ga0501243_002564 Ga0501243_002564_583_2196 498
282 3300049688 Ga0501259_000384 Ga0501259_000384_3773_5386 498
283 3300049705 Ga0501225_0010478 Ga0501225_0010478_738_2351 498
284 3300049707 Ga0501234_000293 Ga0501234_000293_2532_4145 498
285 3300053088 Ga0500644_0000268 Ga0500644_0000268_24880_26403 498
286 3300053092 Ga0500583_0003570 Ga0500583_0003570_2897_4420 498
287 3300053109 Ga0500569_000198 Ga0500569_000198_1360_2883 498
288 3300053142 Ga0500577_0006907 Ga0500577_0006907_517_2040 498
289 3300053153 Ga0500616_0014594 Ga0500616_0014594_2440_3963 498
290 3300053160 Ga0500633_0000165 Ga0500633_0000165_797_2320 498
291 3300053177 Ga0500636_0020192 Ga0500636_0020192_839_2362 498

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22617

HCS_D2

Homocitrate synthase post-HMGL domain-like

290

370

0.94

PF08502

LeuA_dimer

LeuA allosteric (dimerisation) domain

371

504

0.93

PF00682

HMGL-like

HMGL-like

8

276

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3f6g-assembly1.cif.gz_A crystal structure of the regulatory domain of licms in complexed with isoleucine - type ii 0.9258 393 498
3f6h-assembly1.cif.gz_B crystal structure of the regulatory domain of licms in complexed with isoleucine - type iii 0.9201 394 497
3f6h-assembly1.cif.gz_A crystal structure of the regulatory domain of licms in complexed with isoleucine - type iii 0.9062 394 496
3blf-assembly1.cif.gz_A-2 crystal structure of the catalytic domain of licms in complexed with pyruvate 0.9025 8 326
3ble-assembly1.cif.gz_A-2 crystal structure of the catalytic domain of licms in complexed with malonate 0.9002 8 326
ID Description Score Start End Superfamily
3f6gA01 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.935 393 438 3.30.160.740
3f6gB02 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.916 441 497 3.30.160.340
af_I1NJA3_77_365_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9089 7 282 3.20.20.70
4ov9A01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9031 6 282 3.20.20.70
3blfA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9025 8 326 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A4Q3SK37-F1-model_v4 deleted 0.9895 11 218
AF-A0A3D4CAF7-F1-model_v4 deleted 0.9882 5 286
AF-A0A382QSW4-F1-model_v4 Pyruvate carboxyltransferase domain-containing protein 0.982 8 168 GO:0003852
GO:0009098
AF-A0A3D4CAF7-F1-model_v4 deleted 0.9812 5 286
AF-K1UGH7-F1-model_v4 2-isopropylmalate synthase 2 0.9811 122 246 GO:0016740

Feature Viewer

pLDDT pTM Quality
78.46 0.6 Medium
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Predicted Structure (AlphaFold2)

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