F388284

General Info

Members Datasets Scaffolds Average Seq Length
287 235 266 391

Family's Representative Sequence

Representative Sequence 3300059423|Ga0590074_008997|Ga0590074_008997_203_1546
Length 447
Sequence MLGGQNADPEEKRGPAEDVMFRRGGDARKRLTSTRRIEKTWVTLFAFWREVLMPWKETSVMEERLRFVARLLEGEGMSDVCREFGISRKTGYKIFNRYKDDGLEALTDRSRRPVRYANQLPEPVEAMIVSCKKSKPHWGARKIRELLVKRLAGDVRVPSKSTVHAVLDRHGLVAHARRRQRHRAEGTALSQASLPNDLWCADFKGEFKLGNGQYCYPLTVTDQASRYLLACEAFESTREPAVFDAFRRLFVERGLPAAIRSDNGLPFASPNGLYNLSKLSVWWLRLGIALERIRPGRPQQNGRHERMHLTLKKEATRPPGKNILQQQARFDAFVSEFNQERPHEALNMKVPADLYAASSRLYHGLPEIDYPFHDRDALVTNCGRICIYRKKINISTVLAGQKLGLKEVDDGIWLVSFMHYDLGYIDLEQRTLQTIDNPFGTRLSPMS

Samples

Sample ID Description Type Environment
1 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
2 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
3 2519899620 Rhizobium sp. Pop5 Isolate Nodule
4 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
5 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
6 2643221582 Rhizobium sp. Root651 Isolate Unclassified
7 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
8 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
9 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
10 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
11 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
12 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
13 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
14 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
15 2885312484 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 Isolate Nodule
16 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
17 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
18 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
19 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
20 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
21 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
22 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
23 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
28 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
29 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
32 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
33 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
34 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
35 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
36 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
37 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
38 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
39 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
40 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
41 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
42 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
43 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
44 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
55 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
56 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
57 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
58 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
59 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
60 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
61 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
62 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
63 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
64 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
65 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
66 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
67 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
72 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
73 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
74 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
75 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
76 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
77 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
78 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
79 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
82 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
83 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
84 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
85 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
86 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
87 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
88 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
89 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
90 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
91 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
124 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
125 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
126 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
127 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
130 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
131 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
132 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
133 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
134 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
135 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
136 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
137 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
138 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
139 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
140 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
141 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
142 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
143 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
144 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
145 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
146 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
147 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
148 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
149 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
150 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
151 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
152 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
153 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
154 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
155 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
156 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
157 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
158 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
159 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
160 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
161 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
162 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
163 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
164 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
165 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
166 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
167 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
168 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
169 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
170 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
171 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
172 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
173 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
174 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
175 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
176 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
177 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
178 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
179 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
180 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
181 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
182 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
183 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
184 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
185 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
186 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
187 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
188 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
189 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
190 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
191 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
192 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
193 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
194 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
195 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
196 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
197 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
198 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
199 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
200 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
201 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
202 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
203 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
204 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
205 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
206 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
207 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
208 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
209 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
210 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
211 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
212 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
213 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
214 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
215 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
216 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
217 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
218 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
219 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
220 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
221 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
222 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
223 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
224 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
225 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
226 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
227 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
228 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
229 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
230 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
231 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
232 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
233 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
234 8005258706 Rhizobium sp. R693 Isolate Nodule
235 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.33
Metatranscriptomes 0.35
Isolates 7.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.1
Nodule 5.57
Rhizoplane 6.27
Rhizosphere 72.13
Stem 0
Stem Tuber 0
Unclassified 5.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10006062 3300001979 Bacteria 5051
2 JGI24739J22299_10037304 3300001989 Bacteria 1638
3 JGI25152J39213_1011752 3300002773 Bacteria 1919
4 JGI25151J46595_10055870 3300003187 Bacteria 1299
5 JGI25153J46596_10042000 3300003215 Bacteria 1400
6 rootL2_10057714 3300003322 Bacteria 1273
7 rootH1_10062128 3300003323 Bacteria 1444
8 Ga0070670_100336845 3300005331 Bacteria 1324
9 Ga0068869_100211257 3300005334 Bacteria 1534
10 Ga0070669_100226615 3300005353 Bacteria 1479
11 Ga0070674_100019967 3300005356 Bacteria 4270
12 Ga0070673_100193971 3300005364 Bacteria 1746
13 Ga0070688_100197158 3300005365 Bacteria 1406
14 Ga0070667_100011473 3300005367 Bacteria 7327
15 Ga0070714_100267534 3300005435 Bacteria 1584
16 Ga0070713_100149779 3300005436 Bacteria 2074
17 Ga0070710_10088759 3300005437 Bacteria 1820
18 Ga0070711_100219988 3300005439 Bacteria 1475
19 Ga0070708_100088443 3300005445 Bacteria 2817
20 Ga0070678_100262127 3300005456 Bacteria 1454
21 Ga0070681_10238818 3300005458 Bacteria 1731
22 Ga0068867_100296186 3300005459 Bacteria 1332
23 Ga0070707_100330584 3300005468 Bacteria 1481
24 Ga0070697_100210175 3300005536 Bacteria 1656
25 Ga0068853_100184574 3300005539 Bacteria 1893
26 Ga0070672_100162390 3300005543 Bacteria 1854
27 Ga0070695_100159528 3300005545 Bacteria 1582
28 Ga0070704_100034115 3300005549 Bacteria 3448
29 Ga0068855_100277592 3300005563 Bacteria 1862
30 Ga0068857_100270065 3300005577 Bacteria 1563
31 Ga0068854_100109067 3300005578 Bacteria 2085
32 Ga0068852_100211131 3300005616 Bacteria 1842
33 Ga0068852_100277384 3300005616 Bacteria 1615
34 Ga0068859_100442106 3300005617 Bacteria 1397
35 Ga0068864_100022747 3300005618 Bacteria 5256
36 Ga0068864_100281361 3300005618 Bacteria 1553
37 Ga0068863_100088232 3300005841 Bacteria 2939
38 Ga0068863_100275065 3300005841 Bacteria 1631
39 Ga0068863_100423232 3300005841 Bacteria 1305
40 Ga0068860_100399379 3300005843 Bacteria 1360
41 Ga0068862_100093678 3300005844 Bacteria 2619
42 Ga0081539_10012924 3300005985 Bacteria 6354
43 Ga0075365_10001866 3300006038 Bacteria 9912
44 Ga0075365_10042448 3300006038 Bacteria 2973
45 Ga0075368_10075965 3300006042 Bacteria 1363
46 Ga0075364_10146491 3300006051 Bacteria 1590
47 Ga0070715_10083518 3300006163 Bacteria 1455
48 Ga0070712_100120981 3300006175 Bacteria 1969
49 Ga0070712_100351340 3300006175 Bacteria 1207
50 Ga0075362_10067773 3300006177 Bacteria 1625
51 Ga0075369_10066650 3300006186 Bacteria 1579
52 Ga0075366_10069420 3300006195 Bacteria 2097
53 Ga0075431_100296716 3300006847 Bacteria 1633
54 Ga0075433_10324124 3300006852 Bacteria 1363
55 Ga0075434_100457462 3300006871 Bacteria 1297
56 Ga0075436_100086145 3300006914 Bacteria 2182
57 Ga0097620_100442057 3300006931 Bacteria 1397
58 Ga0099795_10050428 3300007788 Bacteria 1514
59 Ga0105240_10330413 3300009093 Bacteria 1735
60 Ga0111539_10500188 3300009094 Bacteria 1416
61 Ga0105245_10232577 3300009098 Bacteria 1783
62 Ga0105243_10156718 3300009148 Bacteria 1959
63 Ga0105242_10012596 3300009176 Bacteria 6512
64 Ga0105248_10414779 3300009177 Bacteria 1516
65 Ga0105249_10204971 3300009553 Bacteria 1932
66 Ga0105249_10395547 3300009553 Bacteria 1411
67 Ga0157370_10240398 3300013104 Bacteria 1675
68 Ga0157370_10386262 3300013104 Bacteria 1289
69 Ga0157369_10284305 3300013105 Bacteria 1722
70 Ga0163162_10305618 3300013306 Bacteria 1723
71 Ga0157372_10225766 3300013307 Bacteria 2171
72 Ga0157375_10433309 3300013308 Bacteria 1481
73 Ga0163163_10328209 3300014325 Bacteria 1584
74 Ga0157380_10257529 3300014326 Bacteria 1583
75 Ga0182008_10044440 3300014497 Bacteria 2209
76 Ga0157379_10219637 3300014968 Bacteria 1722
77 Ga0157376_10392114 3300014969 Bacteria 1340
78 Ga0213874_10045383 3300021377 Bacteria 1330
79 Ga0207425_1010292 3300025245 Bacteria 2283
80 Ga0209129_1000820 3300025258 Bacteria 19533
81 Ga0209129_1015182 3300025258 Bacteria 1598
82 Ga0209025_1000091 3300025294 Bacteria 250401
83 Ga0209025_1000386 3300025294 Bacteria 91377
84 Ga0209025_1009307 3300025294 Bacteria 6875
85 Ga0209758_1006140 3300025297 Bacteria 8803
86 Ga0209758_1057890 3300025297 Bacteria 1299
87 Ga0207692_10099834 3300025898 Bacteria 1591
88 Ga0207692_10164306 3300025898 Bacteria 1282
89 Ga0207699_10035750 3300025906 Bacteria 2828
90 Ga0207654_10166564 3300025911 Bacteria 1428
91 Ga0207707_10235359 3300025912 Bacteria 1593
92 Ga0207695_10260400 3300025913 Bacteria 1632
93 Ga0207693_10107014 3300025915 Bacteria 2194
94 Ga0207693_10137650 3300025915 Bacteria 1920
95 Ga0207650_10155370 3300025925 Bacteria 1809
96 Ga0207650_10307741 3300025925 Bacteria 1295
97 Ga0207687_10218471 3300025927 Bacteria 1499
98 Ga0207700_10103379 3300025928 Bacteria 2277
99 Ga0207700_10116460 3300025928 Bacteria 2159
100 Ga0207700_10324880 3300025928 Bacteria 1334
101 Ga0207700_10341985 3300025928 Bacteria 1301
102 Ga0207664_10093624 3300025929 Bacteria 2468
103 Ga0207686_10007966 3300025934 Bacteria 5713
104 Ga0207709_10176365 3300025935 Bacteria 1505
105 Ga0207670_10240071 3300025936 Bacteria 1396
106 Ga0207670_10283629 3300025936 Unclassified 1292
107 Ga0207669_10016376 3300025937 Bacteria 3765
108 Ga0207704_10279919 3300025938 Bacteria 1267
109 Ga0207691_10109376 3300025940 Bacteria 2459
110 Ga0207679_10326124 3300025945 Bacteria 1331
111 Ga0207667_10292050 3300025949 Bacteria 1665
112 Ga0207651_10332748 3300025960 Bacteria 1273
113 Ga0207712_10329717 3300025961 Bacteria 1262
114 Ga0207668_10273326 3300025972 Bacteria 1382
115 Ga0207640_10168973 3300025981 Bacteria 1627
116 Ga0207658_10071502 3300025986 Bacteria 2627
117 Ga0207677_10268536 3300026023 Bacteria 1394
118 Ga0207639_10353859 3300026041 Bacteria 1312
119 Ga0207678_10187239 3300026067 Bacteria 1768
120 Ga0207678_10267478 3300026067 Bacteria 1466
121 Ga0207702_10419281 3300026078 Bacteria 1294
122 Ga0207641_10273103 3300026088 Bacteria 1587
123 Ga0207641_10423983 3300026088 Bacteria 1281
124 Ga0207648_10237138 3300026089 Bacteria 1623
125 Ga0207648_10339862 3300026089 Bacteria 1352
126 Ga0207674_10204906 3300026116 Bacteria 1922
127 Ga0207683_10243171 3300026121 Bacteria 1642
128 Ga0207698_10242970 3300026142 Bacteria 1642
129 Ga0207698_10284817 3300026142 Bacteria 1530
130 Ga0209971_1006416 3300027682 Bacteria 2780
131 Ga0209813_10048006 3300027866 Bacteria 1324
132 Ga0209974_10035966 3300027876 Bacteria 1644
133 Ga0207428_10237234 3300027907 Bacteria 1363
134 Ga0268265_10328349 3300028380 Bacteria 1388
135 Ga0268264_10352710 3300028381 Bacteria 1401
136 Ga0265325_10074768 3300031241 Bacteria 1693
137 Ga0307408_100082844 3300031548 Bacteria 2402
138 Ga0307413_10081397 3300031824 Bacteria 2076
139 Ga0307414_10146930 3300032004 Bacteria 1854
140 Ga0307414_10254258 3300032004 Bacteria 1462
141 Ga0307411_10248522 3300032005 Bacteria 1397
142 Ga0316580_10044677 3300032139 Bacteria 1367
143 Ga0373934_0041162 3300035086 Bacteria 1823
144 Ga0373923_0027049 3300035111 Bacteria 2285
145 Ga0373953_0064410 3300035117 Bacteria 1503
146 Ga0373954_0020584 3300035118 Bacteria 2985
147 Ga0373956_0087247 3300035119 Bacteria 1436
148 Ga0373955_0055711 3300035172 Bacteria 2166
149 Ga0373935_0173051 3300035692 Bacteria 1478
150 Ga0373933_0109522 3300035724 Bacteria 1721
151 Ga0373937_0092105 3300036401 Bacteria 2809
152 Ga0316582_0137695 3300036647 Unclassified 1644
153 Ga0395900_0419297 3300037418 Bacteria 1299
154 Ga0395898_0405563 3300037466 Bacteria 1299
155 Ga0395905_0383449 3300037471 Bacteria 1299
156 Ga0395901_0460441 3300038443 Bacteria 1299
157 Ga0400484_36106 3300038725 Bacteria 1867
158 Ga0436360_0149393 3300039438 Bacteria 1468
159 Ga0436363_0192495 3300039450 Bacteria 1404
160 Ga0439466_0031153 3300041411 Bacteria 1826
161 Ga0451791_1059376 3300041451 Bacteria 1804
162 Ga0451802_1553441 3300041460 Bacteria 1516
163 Ga0451807_1398371 3300041486 Bacteria 1554
164 Ga0439435_0026430 3300042436 Bacteria 1545
165 Ga0466969_0107771 3300044656 Bacteria 1306
166 Ga0466961_0172290 3300044693 Bacteria 1346
167 Ga0466970_0019271 3300044765 Bacteria 3536
168 Ga0466957_0027860 3300044842 Bacteria 3359
169 Ga0466959_0128511 3300045049 Bacteria 1797
170 Ga0466967_0177837 3300045976 Bacteria 2005
171 Ga0466967_0339556 3300045976 Bacteria 1452
172 Ga0495651_0067349 3300046462 Bacteria 2731
173 Ga0495651_0073403 3300046462 Bacteria 2597
174 Ga0495650_0033510 3300046471 Bacteria 2285
175 Ga0495662_0063797 3300046476 Bacteria 1780
176 Ga0495608_0160124 3300046511 Bacteria 1431
177 Ga0495628_0230493 3300046516 Bacteria 1388
178 Ga0495630_0121409 3300046517 Unclassified 1982
179 Ga0495632_0000360 3300046519 Bacteria 43203
180 Ga0495645_0080002 3300046543 Bacteria 2346
181 Ga0495635_0183556 3300046663 Bacteria 1421
182 Ga0495657_0033162 3300046675 Bacteria 3597
183 Ga0495599_0070105 3300046678 Bacteria 2188
184 Ga0495623_0028948 3300046679 Bacteria 3564
185 Ga0495646_0038454 3300046680 Bacteria 2954
186 Ga0495613_0088953 3300046689 Unclassified 2237
187 Ga0495600_0049204 3300046809 Bacteria 2750
188 Ga0495674_0284649 3300047319 Bacteria 1353
189 Ga0495676_0156200 3300047321 Bacteria 1618
190 Ga0495680_0090861 3300047322 Bacteria 2289
191 Ga0495675_0146541 3300047444 Bacteria 1460
192 Ga0495684_0225166 3300047471 Bacteria 1373
193 Ga0495684_0239177 3300047471 Unclassified 1325
194 Ga0495686_0032968 3300047472 Bacteria 3348
195 Ga0495602_0047016 3300048088 Bacteria 3892
196 Ga0496100_0132006 3300048903 Bacteria 1760
197 Ga0496100_0202844 3300048903 Bacteria 1446
198 Ga0496101_0204025 3300048904 Bacteria 1529
199 Ga0496102_0186632 3300048905 Bacteria 1954
200 Ga0496102_0249747 3300048905 Bacteria 1672
201 Ga0496102_0285542 3300048905 Bacteria 1555
202 Ga0496103_0101144 3300048906 Bacteria 1824
203 Ga0496105_0285569 3300048908 Bacteria 1329
204 Ga0496106_0224237 3300048909 Bacteria 1499
205 Ga0496106_0276292 3300048909 Bacteria 1345
206 Ga0496108_0232140 3300048911 Bacteria 1604
207 Ga0496108_0295196 3300048911 Bacteria 1411
208 Ga0496110_0056184 3300048913 Bacteria 3464
209 Ga0496110_0261700 3300048913 Bacteria 1574
210 Ga0496116_0022057 3300048919 Bacteria 4787
211 Ga0496117_0046789 3300048920 Bacteria 3109
212 Ga0496118_0003734 3300048921 Bacteria 18843
213 Ga0496122_0000762 3300048925 Bacteria 62299
214 Ga0496122_0152405 3300048925 Bacteria 1424
215 Ga0496123_0000032 3300048926 Bacteria 285282
216 Ga0496123_0000143 3300048926 Bacteria 144850
217 Ga0496124_0018762 3300048927 Bacteria 6465
218 Ga0496124_0080898 3300048927 Bacteria 2672
219 Ga0501032_0131909 3300049569 Bacteria 1648
220 Ga0501034_0340292 3300049571 Bacteria 1430
221 Ga0501034_0370955 3300049571 Bacteria 1357
222 Ga0501036_0063793 3300049572 Bacteria 3119
223 Ga0501036_0201145 3300049572 Bacteria 1675
224 Ga0501038_0096761 3300049574 Bacteria 2463
225 Ga0501038_0216690 3300049574 Bacteria 1529
226 Ga0501038_0340315 3300049574 Bacteria 1170
227 Ga0501039_0153763 3300049575 Bacteria 1807
228 Ga0501040_0155469 3300049576 Bacteria 1615
229 Ga0501040_0193814 3300049576 Bacteria 1442
230 Ga0501042_0219999 3300049578 Bacteria 1370
231 Ga0501047_0181466 3300049581 Bacteria 1971
232 Ga0501069_0031775 3300049585 Bacteria 2905
233 Ga0501071_0245395 3300049587 Bacteria 1351
234 Ga0501074_0027940 3300049590 Bacteria 4089
235 Ga0501076_0141266 3300049592 Bacteria 1956
236 Ga0501076_0170282 3300049592 Bacteria 1775
237 Ga0501080_0095445 3300049742 Bacteria 2761
238 Ga0501080_0294479 3300049742 Bacteria 1473
239 Ga0501081_0089842 3300049743 Bacteria 2159
240 Ga0501035_0021305 3300049822 Bacteria 5958
241 Ga0501044_0010118 3300049823 Bacteria 10249
242 Ga0501044_0205463 3300049823 Bacteria 1926
243 Ga0501045_0167765 3300049824 Bacteria 1635
244 Ga0501045_0210485 3300049824 Bacteria 1448
245 nmdc:mga00v17_173480_c1 3300050491 Bacteria 1391
246 nmdc:mga0yw44_59188_c1 3300050492 Bacteria 2343
247 nmdc:mga0yw44_75982_c1 3300050492 Bacteria 2096
248 nmdc:mga07m45_103270_c1 3300050496 Bacteria 1638
249 nmdc:mga08y16_315863_c1 3300050511 Bacteria 1609
250 nmdc:mga08x19_132084_c1 3300050514 Bacteria 1680
251 nmdc:mga08x19_173815_c1 3300050514 Bacteria 1468
252 nmdc:mga0sz30_65342_c2 3300050516 Bacteria 1181
253 nmdc:mga0sz30_84185_c1 3300050516 Bacteria 1379
254 Ga0495612_0023637 3300053078 Bacteria 2466
255 Ga0495595_0014921 3300053084 Bacteria 3304
256 Ga0495619_0050748 3300053085 Bacteria 2739
257 Ga0495619_0200302 3300053085 Unclassified 1382
258 Ga0500595_001005 3300053119 Bacteria 15840
259 Ga0500603_023769 3300053150 Bacteria 1528
260 Ga0500637_0001699 3300053178 Bacteria 9483
261 Ga0501084_0249861 3300054114 Bacteria 1497
262 Ga0500661_000273 3300055283 Bacteria 9361
263 Ga0590074_008997 3300059423 Bacteria 1664
264 Ga0587083_0006931 3300059505 Bacteria 1712
265 Ga0501082_0175375 3300060353 Bacteria 1864
266 Ga0466962_0043592 3300061719 Bacteria 2146

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005549 Ga0070704_100034115 Ga0070704_1000341152 354
2 3300038725 Ga0400484_36106 Ga0400484_36106_230_1360 356
3 iso_pu_bacteria 2513237088 2513594859 358
4 3300005543 Ga0070672_100162390 Ga0070672_1001623901 363
5 3300009176 Ga0105242_10012596 Ga0105242_100125962 363
6 3300025934 Ga0207686_10007966 Ga0207686_100079664 363
7 3300025940 Ga0207691_10109376 Ga0207691_101093761 363
8 3300026089 Ga0207648_10237138 Ga0207648_102371381 363
9 3300060353 Ga0501082_0175375 Ga0501082_0175375_167_1267 365
10 iso_pu_bacteria 2885312484 2885312845 365
11 iso_pu_bacteria 2885312484 2885314148 365
12 iso_pu_bacteria 2885312484 2885317161 365
13 3300049581 Ga0501047_0181466 Ga0501047_0181466_611_1723 369
14 3300049587 Ga0501071_0245395 Ga0501071_0245395_75_1193 369
15 3300050516 nmdc:mga0sz30_65342_c2 nmdc:mga0sz30_65342_c2_40_1158 369
16 3300046517 Ga0495630_0121409 Ga0495630_0121409_247_1446 370
17 3300046689 Ga0495613_0088953 Ga0495613_0088953_340_1539 370
18 3300047471 Ga0495684_0239177 Ga0495684_0239177_115_1314 370
19 3300053085 Ga0495619_0200302 Ga0495619_0200302_161_1360 370
20 3300036647 Ga0316582_0137695 Ga0316582_0137695_217_1347 371
21 3300049574 Ga0501038_0340315 Ga0501038_0340315_13_1143 374
22 iso_pu_bacteria 2599185170 2599417244 375
23 3300032139 Ga0316580_10044677 Ga0316580_100446772 379
24 3300041460 Ga0451802_1553441 Ga0451802_1553441_278_1429 380
25 3300005331 Ga0070670_100336845 Ga0070670_1003368451 381
26 3300005353 Ga0070669_100226615 Ga0070669_1002266151 381
27 3300026041 Ga0207639_10353859 Ga0207639_103538591 381
28 iso_pu_bacteria 2519899620 2520377910 381
29 3300050514 nmdc:mga08x19_173815_c1 nmdc:mga08x19_173815_c1_77_1240 382
30 3300009093 Ga0105240_10330413 Ga0105240_103304131 383
31 3300013104 Ga0157370_10240398 Ga0157370_102403981 383
32 3300013105 Ga0157369_10284305 Ga0157369_102843052 383
33 3300013307 Ga0157372_10225766 Ga0157372_102257661 383
34 3300044656 Ga0466969_0107771 Ga0466969_0107771_105_1286 383
35 3300049572 Ga0501036_0201145 Ga0501036_0201145_193_1374 383
36 3300049574 Ga0501038_0216690 Ga0501038_0216690_198_1379 383
37 3300049576 Ga0501040_0155469 Ga0501040_0155469_122_1303 383
38 3300049592 Ga0501076_0141266 Ga0501076_0141266_339_1520 383
39 3300050514 nmdc:mga08x19_132084_c1 nmdc:mga08x19_132084_c1_342_1523 383
40 3300049590 Ga0501074_0027940 Ga0501074_0027940_2870_4024 384
41 3300049742 Ga0501080_0095445 Ga0501080_0095445_1360_2514 384
42 3300005437 Ga0070710_10088759 Ga0070710_100887592 385
43 3300005439 Ga0070711_100219988 Ga0070711_1002199881 385
44 3300005617 Ga0068859_100442106 Ga0068859_1004421061 385
45 3300005618 Ga0068864_100281361 Ga0068864_1002813612 385
46 3300005841 Ga0068863_100088232 Ga0068863_1000882323 385
47 3300005841 Ga0068863_100423232 Ga0068863_1004232321 385
48 3300005843 Ga0068860_100399379 Ga0068860_1003993791 385
49 3300005844 Ga0068862_100093678 Ga0068862_1000936782 385
50 3300006175 Ga0070712_100351340 Ga0070712_1003513401 385
51 3300006931 Ga0097620_100442057 Ga0097620_1004420572 385
52 3300007788 Ga0099795_10050428 Ga0099795_100504281 385
53 3300009148 Ga0105243_10156718 Ga0105243_101567183 385
54 3300009553 Ga0105249_10204971 Ga0105249_102049712 385
55 3300009553 Ga0105249_10395547 Ga0105249_103955471 385
56 3300013306 Ga0163162_10305618 Ga0163162_103056182 385
57 3300025911 Ga0207654_10166564 Ga0207654_101665642 385
58 3300025927 Ga0207687_10218471 Ga0207687_102184712 385
59 3300025936 Ga0207670_10240071 Ga0207670_102400711 385
60 3300025938 Ga0207704_10279919 Ga0207704_102799191 385
61 3300025945 Ga0207679_10326124 Ga0207679_103261241 385
62 3300026067 Ga0207678_10187239 Ga0207678_101872392 385
63 3300026088 Ga0207641_10423983 Ga0207641_104239831 385
64 3300026142 Ga0207698_10242970 Ga0207698_102429702 385
65 3300027876 Ga0209974_10035966 Ga0209974_100359662 385
66 3300028380 Ga0268265_10328349 Ga0268265_103283491 385
67 3300028381 Ga0268264_10352710 Ga0268264_103527101 385
68 3300039450 Ga0436363_0192495 Ga0436363_0192495_149_1309 385
69 3300041411 Ga0439466_0031153 Ga0439466_0031153_542_1705 385
70 3300041451 Ga0451791_1059376 Ga0451791_1059376_506_1666 385
71 3300041486 Ga0451807_1398371 Ga0451807_1398371_273_1433 385
72 3300044765 Ga0466970_0019271 Ga0466970_0019271_2348_3511 385
73 3300044842 Ga0466957_0027860 Ga0466957_0027860_1935_3098 385
74 3300045049 Ga0466959_0128511 Ga0466959_0128511_284_1447 385
75 3300045976 Ga0466967_0339556 Ga0466967_0339556_112_1275 385
76 3300046471 Ga0495650_0033510 Ga0495650_0033510_886_2049 385
77 3300046519 Ga0495632_0000360 Ga0495632_0000360_31445_32608 385
78 3300047472 Ga0495686_0032968 Ga0495686_0032968_1527_2690 385
79 3300048905 Ga0496102_0186632 Ga0496102_0186632_123_1283 385
80 3300048908 Ga0496105_0285569 Ga0496105_0285569_66_1226 385
81 3300048911 Ga0496108_0232140 Ga0496108_0232140_138_1298 385
82 3300048911 Ga0496108_0295196 Ga0496108_0295196_147_1307 385
83 3300048913 Ga0496110_0056184 Ga0496110_0056184_1241_2401 385
84 3300048925 Ga0496122_0000762 Ga0496122_0000762_3816_4979 385
85 3300048925 Ga0496122_0152405 Ga0496122_0152405_100_1263 385
86 3300048926 Ga0496123_0000032 Ga0496123_0000032_162_1325 385
87 3300048926 Ga0496123_0000143 Ga0496123_0000143_56422_57585 385
88 3300048927 Ga0496124_0018762 Ga0496124_0018762_2682_3845 385
89 3300048927 Ga0496124_0080898 Ga0496124_0080898_458_1621 385
90 3300049571 Ga0501034_0340292 Ga0501034_0340292_74_1234 385
91 3300049585 Ga0501069_0031775 Ga0501069_0031775_733_1896 385
92 3300049822 Ga0501035_0021305 Ga0501035_0021305_2728_3891 385
93 3300050491 nmdc:mga00v17_173480_c1 nmdc:mga00v17_173480_c1_169_1329 385
94 3300050492 nmdc:mga0yw44_59188_c1 nmdc:mga0yw44_59188_c1_1052_2212 385
95 3300050496 nmdc:mga07m45_103270_c1 nmdc:mga07m45_103270_c1_98_1258 385
96 3300050516 nmdc:mga0sz30_84185_c1 nmdc:mga0sz30_84185_c1_73_1233 385
97 3300053119 Ga0500595_001005 Ga0500595_001005_5352_6512 385
98 3300053150 Ga0500603_023769 Ga0500603_023769_161_1321 385
99 3300053178 Ga0500637_0001699 Ga0500637_0001699_77_1237 385
100 3300055283 Ga0500661_000273 Ga0500661_000273_5364_6524 385
101 3300061719 Ga0466962_0043592 Ga0466962_0043592_262_1425 385
102 3300006163 Ga0070715_10083518 Ga0070715_100835181 387
103 3300001989 JGI24739J22299_10037304 JGI24739J22299_100373041 389
104 3300003323 rootH1_10062128 rootH1_100621281 389
105 3300005334 Ga0068869_100211257 Ga0068869_1002112572 389
106 3300005539 Ga0068853_100184574 Ga0068853_1001845742 389
107 3300005577 Ga0068857_100270065 Ga0068857_1002700652 389
108 3300005841 Ga0068863_100275065 Ga0068863_1002750651 389
109 3300025925 Ga0207650_10155370 Ga0207650_101553702 389
110 3300025936 Ga0207670_10283629 Ga0207670_102836291 389
111 3300026088 Ga0207641_10273103 Ga0207641_102731032 389
112 3300026116 Ga0207674_10204906 Ga0207674_102049062 389
113 iso_pu_bacteria 2513237144 2513914204 389
114 iso_pu_bacteria 2599185236 2599721983 389
115 iso_pu_bacteria 2643221582 2643918196 389
116 iso_pu_bacteria 2775507266 2778176479 389
117 iso_pu_bacteria 2775507266 2778178661 389
118 iso_pu_bacteria 2791355094 2792640587 389
119 iso_pu_bacteria 2838029111 2838035585 389
120 iso_pu_bacteria 2842298080 2842304101 389
121 iso_pu_bacteria 2842357229 2842363704 389
122 iso_pu_bacteria 2842475841 2842482320 389
123 iso_pu_bacteria 2842502639 2842509112 389
124 iso_pu_bacteria 2852387548 2852389542 389
125 iso_pu_bacteria 2989771324 2989775885 389
126 iso_pu_bacteria 8005258706 8005261126 389
127 3300006914 Ga0075436_100086145 Ga0075436_1000861452 390
128 3300026078 Ga0207702_10419281 Ga0207702_104192811 390
129 3300005445 Ga0070708_100088443 Ga0070708_1000884432 391
130 3300005458 Ga0070681_10238818 Ga0070681_102388181 391
131 3300005545 Ga0070695_100159528 Ga0070695_1001595281 391
132 3300005563 Ga0068855_100277592 Ga0068855_1002775921 391
133 3300005578 Ga0068854_100109067 Ga0068854_1001090672 391
134 3300005616 Ga0068852_100211131 Ga0068852_1002111311 391
135 3300025912 Ga0207707_10235359 Ga0207707_102353591 391
136 3300025913 Ga0207695_10260400 Ga0207695_102604002 391
137 3300025949 Ga0207667_10292050 Ga0207667_102920502 391
138 3300025981 Ga0207640_10168973 Ga0207640_101689731 391
139 3300026142 Ga0207698_10284817 Ga0207698_102848171 391
140 iso_pu_bacteria 8005682033 8005682576 391
141 3300005468 Ga0070707_100330584 Ga0070707_1003305841 392
142 3300005536 Ga0070697_100210175 Ga0070697_1002101751 392
143 3300006847 Ga0075431_100296716 Ga0075431_1002967162 392
144 3300006852 Ga0075433_10324124 Ga0075433_103241241 392
145 3300006871 Ga0075434_100457462 Ga0075434_1004574621 392
146 3300025898 Ga0207692_10164306 Ga0207692_101643061 392
147 3300025928 Ga0207700_10116460 Ga0207700_101164601 392
148 3300031241 Ga0265325_10074768 Ga0265325_100747681 392
149 3300035086 Ga0373934_0041162 Ga0373934_0041162_154_1338 392
150 3300035111 Ga0373923_0027049 Ga0373923_0027049_125_1309 392
151 3300035117 Ga0373953_0064410 Ga0373953_0064410_213_1397 392
152 3300035118 Ga0373954_0020584 Ga0373954_0020584_793_1977 392
153 3300035119 Ga0373956_0087247 Ga0373956_0087247_118_1302 392
154 3300035172 Ga0373955_0055711 Ga0373955_0055711_522_1706 392
155 3300035692 Ga0373935_0173051 Ga0373935_0173051_241_1425 392
156 3300035724 Ga0373933_0109522 Ga0373933_0109522_454_1638 392
157 3300036401 Ga0373937_0092105 Ga0373937_0092105_223_1407 392
158 3300037418 Ga0395900_0419297 Ga0395900_0419297_38_1231 392
159 3300037466 Ga0395898_0405563 Ga0395898_0405563_38_1231 392
160 3300037471 Ga0395905_0383449 Ga0395905_0383449_69_1262 392
161 3300038443 Ga0395901_0460441 Ga0395901_0460441_69_1262 392
162 3300039438 Ga0436360_0149393 Ga0436360_0149393_139_1323 392
163 3300044693 Ga0466961_0172290 Ga0466961_0172290_140_1318 392
164 3300045976 Ga0466967_0177837 Ga0466967_0177837_654_1838 392
165 3300046462 Ga0495651_0067349 Ga0495651_0067349_1161_2345 392
166 3300046462 Ga0495651_0073403 Ga0495651_0073403_1355_2539 392
167 3300046476 Ga0495662_0063797 Ga0495662_0063797_80_1264 392
168 3300046511 Ga0495608_0160124 Ga0495608_0160124_86_1270 392
169 3300046516 Ga0495628_0230493 Ga0495628_0230493_127_1311 392
170 3300046543 Ga0495645_0080002 Ga0495645_0080002_49_1233 392
171 3300046663 Ga0495635_0183556 Ga0495635_0183556_173_1357 392
172 3300046675 Ga0495657_0033162 Ga0495657_0033162_373_1557 392
173 3300046678 Ga0495599_0070105 Ga0495599_0070105_623_1807 392
174 3300046679 Ga0495623_0028948 Ga0495623_0028948_43_1227 392
175 3300046680 Ga0495646_0038454 Ga0495646_0038454_1118_2302 392
176 3300046809 Ga0495600_0049204 Ga0495600_0049204_477_1661 392
177 3300047319 Ga0495674_0284649 Ga0495674_0284649_126_1310 392
178 3300047322 Ga0495680_0090861 Ga0495680_0090861_983_2167 392
179 3300047444 Ga0495675_0146541 Ga0495675_0146541_104_1288 392
180 3300047471 Ga0495684_0225166 Ga0495684_0225166_91_1275 392
181 3300048088 Ga0495602_0047016 Ga0495602_0047016_66_1250 392
182 3300049742 Ga0501080_0294479 Ga0501080_0294479_16_1200 392
183 3300049743 Ga0501081_0089842 Ga0501081_0089842_880_2064 392
184 3300049824 Ga0501045_0210485 Ga0501045_0210485_127_1311 392
185 3300053078 Ga0495612_0023637 Ga0495612_0023637_840_2024 392
186 3300053084 Ga0495595_0014921 Ga0495595_0014921_1919_3103 392
187 3300053085 Ga0495619_0050748 Ga0495619_0050748_543_1727 392
188 3300001979 JGI24740J21852_10006062 JGI24740J21852_100060625 393
189 3300002773 JGI25152J39213_1011752 JGI25152J39213_10117522 393
190 3300003187 JGI25151J46595_10055870 JGI25151J46595_100558701 393
191 3300003215 JGI25153J46596_10042000 JGI25153J46596_100420001 393
192 3300003322 rootL2_10057714 rootL2_100577141 393
193 3300005356 Ga0070674_100019967 Ga0070674_1000199673 393
194 3300005364 Ga0070673_100193971 Ga0070673_1001939711 393
195 3300005365 Ga0070688_100197158 Ga0070688_1001971581 393
196 3300005367 Ga0070667_100011473 Ga0070667_1000114738 393
197 3300005435 Ga0070714_100267534 Ga0070714_1002675341 393
198 3300005436 Ga0070713_100149779 Ga0070713_1001497792 393
199 3300005456 Ga0070678_100262127 Ga0070678_1002621272 393
200 3300005459 Ga0068867_100296186 Ga0068867_1002961861 393
201 3300005616 Ga0068852_100277384 Ga0068852_1002773841 393
202 3300005618 Ga0068864_100022747 Ga0068864_1000227476 393
203 3300005985 Ga0081539_10012924 Ga0081539_100129242 393
204 3300006038 Ga0075365_10001866 Ga0075365_100018664 393
205 3300006038 Ga0075365_10042448 Ga0075365_100424485 393
206 3300006042 Ga0075368_10075965 Ga0075368_100759651 393
207 3300006051 Ga0075364_10146491 Ga0075364_101464912 393
208 3300006175 Ga0070712_100120981 Ga0070712_1001209812 393
209 3300006177 Ga0075362_10067773 Ga0075362_100677732 393
210 3300006186 Ga0075369_10066650 Ga0075369_100666501 393
211 3300006195 Ga0075366_10069420 Ga0075366_100694203 393
212 3300009094 Ga0111539_10500188 Ga0111539_105001881 393
213 3300009098 Ga0105245_10232577 Ga0105245_102325771 393
214 3300009177 Ga0105248_10414779 Ga0105248_104147792 393
215 3300013104 Ga0157370_10386262 Ga0157370_103862621 393
216 3300013308 Ga0157375_10433309 Ga0157375_104333091 393
217 3300014325 Ga0163163_10328209 Ga0163163_103282091 393
218 3300014326 Ga0157380_10257529 Ga0157380_102575291 393
219 3300014497 Ga0182008_10044440 Ga0182008_100444402 393
220 3300014968 Ga0157379_10219637 Ga0157379_102196371 393
221 3300014969 Ga0157376_10392114 Ga0157376_103921141 393
222 3300021377 Ga0213874_10045383 Ga0213874_100453831 393
223 3300025245 Ga0207425_1010292 Ga0207425_10102921 393
224 3300025258 Ga0209129_1000820 Ga0209129_10008209 393
225 3300025258 Ga0209129_1015182 Ga0209129_10151821 393
226 3300025294 Ga0209025_1000091 Ga0209025_1000091221 393
227 3300025294 Ga0209025_1000386 Ga0209025_100038678 393
228 3300025294 Ga0209025_1009307 Ga0209025_10093072 393
229 3300025297 Ga0209758_1006140 Ga0209758_10061409 393
230 3300025297 Ga0209758_1057890 Ga0209758_10578901 393
231 3300025898 Ga0207692_10099834 Ga0207692_100998341 393
232 3300025906 Ga0207699_10035750 Ga0207699_100357503 393
233 3300025915 Ga0207693_10107014 Ga0207693_101070142 393
234 3300025915 Ga0207693_10137650 Ga0207693_101376501 393
235 3300025925 Ga0207650_10307741 Ga0207650_103077411 393
236 3300025928 Ga0207700_10103379 Ga0207700_101033793 393
237 3300025928 Ga0207700_10324880 Ga0207700_103248801 393
238 3300025928 Ga0207700_10341985 Ga0207700_103419851 393
239 3300025929 Ga0207664_10093624 Ga0207664_100936243 393
240 3300025935 Ga0207709_10176365 Ga0207709_101763651 393
241 3300025937 Ga0207669_10016376 Ga0207669_100163763 393
242 3300025960 Ga0207651_10332748 Ga0207651_103327481 393
243 3300025961 Ga0207712_10329717 Ga0207712_103297171 393
244 3300025972 Ga0207668_10273326 Ga0207668_102733261 393
245 3300025986 Ga0207658_10071502 Ga0207658_100715021 393
246 3300026023 Ga0207677_10268536 Ga0207677_102685361 393
247 3300026067 Ga0207678_10267478 Ga0207678_102674781 393
248 3300026089 Ga0207648_10339862 Ga0207648_103398621 393
249 3300026121 Ga0207683_10243171 Ga0207683_102431712 393
250 3300027682 Ga0209971_1006416 Ga0209971_10064163 393
251 3300027866 Ga0209813_10048006 Ga0209813_100480061 393
252 3300027907 Ga0207428_10237234 Ga0207428_102372341 393
253 3300031548 Ga0307408_100082844 Ga0307408_1000828442 393
254 3300031824 Ga0307413_10081397 Ga0307413_100813972 393
255 3300032004 Ga0307414_10146930 Ga0307414_101469302 393
256 3300032004 Ga0307414_10254258 Ga0307414_102542581 393
257 3300032005 Ga0307411_10248522 Ga0307411_102485221 393
258 3300042436 Ga0439435_0026430 Ga0439435_0026430_68_1252 393
259 3300047321 Ga0495676_0156200 Ga0495676_0156200_287_1510 393
260 3300048903 Ga0496100_0132006 Ga0496100_0132006_64_1248 393
261 3300048903 Ga0496100_0202844 Ga0496100_0202844_125_1348 393
262 3300048904 Ga0496101_0204025 Ga0496101_0204025_197_1381 393
263 3300048905 Ga0496102_0249747 Ga0496102_0249747_69_1292 393
264 3300048905 Ga0496102_0285542 Ga0496102_0285542_173_1357 393
265 3300048906 Ga0496103_0101144 Ga0496103_0101144_120_1343 393
266 3300048909 Ga0496106_0224237 Ga0496106_0224237_196_1419 393
267 3300048909 Ga0496106_0276292 Ga0496106_0276292_77_1261 393
268 3300048913 Ga0496110_0261700 Ga0496110_0261700_117_1301 393
269 3300048919 Ga0496116_0022057 Ga0496116_0022057_2703_3890 393
270 3300048920 Ga0496117_0046789 Ga0496117_0046789_1755_2942 393
271 3300048921 Ga0496118_0003734 Ga0496118_0003734_15329_16516 393
272 3300049569 Ga0501032_0131909 Ga0501032_0131909_128_1324 393
273 3300049571 Ga0501034_0370955 Ga0501034_0370955_110_1297 393
274 3300049572 Ga0501036_0063793 Ga0501036_0063793_145_1341 393
275 3300049574 Ga0501038_0096761 Ga0501038_0096761_120_1316 393
276 3300049575 Ga0501039_0153763 Ga0501039_0153763_398_1594 393
277 3300049576 Ga0501040_0193814 Ga0501040_0193814_171_1358 393
278 3300049578 Ga0501042_0219999 Ga0501042_0219999_106_1293 393
279 3300049592 Ga0501076_0170282 Ga0501076_0170282_429_1613 393
280 3300049823 Ga0501044_0010118 Ga0501044_0010118_3402_4589 393
281 3300049823 Ga0501044_0205463 Ga0501044_0205463_64_1251 393
282 3300049824 Ga0501045_0167765 Ga0501045_0167765_227_1411 393
283 3300050492 nmdc:mga0yw44_75982_c1 nmdc:mga0yw44_75982_c1_857_2041 393
284 3300050511 nmdc:mga08y16_315863_c1 nmdc:mga08y16_315863_c1_107_1309 393
285 3300054114 Ga0501084_0249861 Ga0501084_0249861_148_1335 393
286 3300059423 Ga0590074_008997 Ga0590074_008997_203_1546 393
287 3300059505 Ga0587083_0006931 Ga0587083_0006931_168_1355 393

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13518

HTH_28

Helix-turn-helix domain

63

113

0.99

PF00665

rve

Integrase core domain

192

298

0.96

PF13683

rve_3

Integrase core domain

286

351

0.96

PF13384

HTH_23

Homeodomain-like domain

58

107

0.95

PF13551

HTH_29

Winged helix-turn helix

64

126

0.93

PF13565

HTH_32

Homeodomain-like domain

90

167

0.9

PF13011

LZ_Tnp_IS481

leucine-zipper of insertion element IS481

62

133

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gdt-assembly1.cif.gz_B crystal structure of a site-specific recombinase, gamma-delta resolvase complexed with a 34 bp cleavage site 0.9364 12 44
5cy2-assembly2.cif.gz_E tn3 resolvase - site iii complex crystal form ii 0.9222 12 48
2x48-assembly1.cif.gz_A orf 55 from sulfolobus islandicus rudivirus 1 0.863 6 44
2r0q-assembly1.cif.gz_F crystal structure of a serine recombinase- dna regulatory complex 0.8313 1 44
2r0q-assembly1.cif.gz_E crystal structure of a serine recombinase- dna regulatory complex 0.8298 1 44
ID Description Score Start End Superfamily
1gdtB03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9364 12 44 1.10.10.60
1zr4D03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.93 12 44 1.10.10.60
1zr2B03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.926 12 44 1.10.10.60
af_P37007_135_295_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9076 140 297 3.30.420.10
1gdtA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8985 12 42 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A5R2MWL9-F1-model_v4 Transposase 0.9826 144 250 GO:0003676
GO:0015074
AF-A0A5R2MWL9-F1-model_v4 Transposase 0.9736 144 250 GO:0003676
GO:0015074
AF-A0A838WAP2-F1-model_v4 IS481 family transposase 0.9721 140 242 GO:0003676
GO:0015074
AF-A0A441YHW7-F1-model_v4 Transposase 0.9557 128 260 GO:0003676
GO:0015074
AF-A0A246U0U1-F1-model_v4 Integrase 0.9493 134 393 GO:0003676
GO:0015074

Feature Viewer

pLDDT pTM Quality
82.73 0.64 Medium
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Predicted Structure (AlphaFold2)

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