F387010

General Info

Members Datasets Scaffolds Average Seq Length
285 218 570 156

Family's Representative Sequence

Representative Sequence 3300046491|Ga0495584_0093925|Ga0495584_0093925_349_921
Length 190
Sequence MLAALLCISLMAGHGAAKQFYHSAEGGTVMSHQHDAAAPKWKFDGVRVVKSGELDINTAQTPGMNRAAAITYARTGAEKLWAGTVVIHAKAKTGAHHHGHVESVIYVVKGKARMRWGEKLEFMAEAGPGDFIYVPPYVPHQEINASDTEALSCVICRSGQEPVVVNLDLPVVEKPEEVHWTDDLHPAPKR

Samples

Sample ID Description Type Environment
1 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
4 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
52 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
74 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
75 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
78 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
120 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
121 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
122 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
123 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
124 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
125 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
126 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
127 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
128 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
129 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
130 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
131 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
132 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
133 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
134 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
135 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
136 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
137 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
138 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
139 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
140 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
141 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
142 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
143 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
144 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
145 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
146 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
147 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
148 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
149 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
150 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
151 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
152 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
153 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
154 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
155 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
156 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
157 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
158 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
159 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
160 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
161 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
162 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
163 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
164 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
165 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
166 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
167 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
168 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
169 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
170 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
171 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
172 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
173 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
174 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
175 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
176 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
177 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
178 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
179 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
180 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
182 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
183 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
184 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
185 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
186 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
187 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
188 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
189 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
190 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
191 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
192 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
193 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
194 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
195 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
196 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
197 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
198 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
199 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
200 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
201 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
202 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
203 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
204 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
205 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
206 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
207 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
208 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
209 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
210 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
211 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
212 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
213 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
214 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
215 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
216 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
217 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
218 2738543013 Variovorax sp. BT01 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.25
Metatranscriptomes 1.4
Isolates 0.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.04
Nodule 0
Rhizoplane 1.05
Rhizosphere 79.3
Stem 0
Stem Tuber 0
Unclassified 7.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495584_0093925 3300046491 Bacteria 1514
2 JGI25156J39149_1022569 3300002705 Bacteria 1066
3 Ga0055535_1000179 3300003761 Bacteria 67830
4 Ga0055535_1000282 3300003761 Bacteria 53559
5 Ga0055542_1037194 3300003762 Bacteria 590
6 Ga0055529_1000491 3300003763 Bacteria 36152
7 Ga0070658_10015690 3300005327 Bacteria 6059
8 Ga0068869_100055872 3300005334 Bacteria 2878
9 Ga0068869_101020501 3300005334 Bacteria 721
10 Ga0068868_100076505 3300005338 Bacteria 2676
11 Ga0070660_100658740 3300005339 Unclassified 877
12 Ga0070689_100715050 3300005340 Bacteria 875
13 Ga0070668_100120716 3300005347 Bacteria 2094
14 Ga0070675_100672796 3300005354 Bacteria 942
15 Ga0070671_100348463 3300005355 Bacteria 1264
16 Ga0070673_100550783 3300005364 Bacteria 1048
17 Ga0070659_100157381 3300005366 Bacteria 1856
18 Ga0070667_101088812 3300005367 Bacteria 747
19 Ga0070709_10006840 3300005434 Bacteria 6228
20 Ga0070709_10245806 3300005434 Bacteria 1287
21 Ga0070713_100000096 3300005436 Bacteria 56528
22 Ga0070713_100089313 3300005436 Bacteria 2646
23 Ga0070710_10096329 3300005437 Bacteria 1754
24 Ga0070694_100650883 3300005444 Bacteria 853
25 Ga0070663_101573011 3300005455 Bacteria 586
26 Ga0068867_101214918 3300005459 Unclassified 693
27 Ga0070706_100000928 3300005467 Bacteria 32066
28 Ga0070697_100011458 3300005536 Bacteria 6932
29 Ga0068853_100022588 3300005539 Bacteria 5256
30 Ga0070696_100002214 3300005546 Bacteria 12803
31 Ga0070665_100622221 3300005548 Bacteria 1093
32 Ga0070704_100316361 3300005549 Bacteria 1306
33 Ga0068855_100917277 3300005563 Bacteria 924
34 Ga0070664_100150464 3300005564 Unclassified 2054
35 Ga0068857_100111614 3300005577 Bacteria 2458
36 Ga0068854_100316368 3300005578 Unclassified 1267
37 Ga0068854_100983269 3300005578 Bacteria 746
38 Ga0068856_100433338 3300005614 Bacteria 1335
39 Ga0068856_100645814 3300005614 Bacteria 1079
40 Ga0068856_101919484 3300005614 Bacteria 603
41 Ga0068859_100193497 3300005617 Unclassified 2118
42 Ga0068866_10025520 3300005718 Bacteria 2779
43 Ga0068870_10741431 3300005840 Bacteria 681
44 Ga0068863_100493605 3300005841 Unclassified 1205
45 Ga0068858_100160860 3300005842 Bacteria 2114
46 Ga0068858_100344054 3300005842 Bacteria 1428
47 Ga0068860_100328345 3300005843 Bacteria 1502
48 Ga0068860_101111786 3300005843 Bacteria 810
49 Ga0068860_101306536 3300005843 Unclassified 746
50 Ga0081540_1000180 3300005983 Bacteria 65914
51 Ga0081540_1215144 3300005983 Bacteria 688
52 Ga0070717_10008894 3300006028 Bacteria 7523
53 Ga0075364_10164890 3300006051 Bacteria 1497
54 Ga0070712_100053513 3300006175 Bacteria 2818
55 Ga0075362_10243630 3300006177 Bacteria 883
56 Ga0075428_100192634 3300006844 Bacteria 2205
57 Ga0075430_100264306 3300006846 Bacteria 1425
58 Ga0075431_100365599 3300006847 Bacteria 1448
59 Ga0075433_10123983 3300006852 Bacteria 2295
60 Ga0075436_100087871 3300006914 Bacteria 2159
61 Ga0097620_100193502 3300006931 Unclassified 2118
62 Ga0099794_10075997 3300007265 Bacteria 1651
63 Ga0099795_10000343 3300007788 Bacteria 8406
64 Ga0099795_10067612 3300007788 Bacteria 1341
65 Ga0105240_10825350 3300009093 Unclassified 1003
66 Ga0111539_10437410 3300009094 Bacteria 1523
67 Ga0105247_10218416 3300009101 Bacteria 1289
68 Ga0114129_10005694 3300009147 Bacteria 17649
69 Ga0114129_10020095 3300009147 Bacteria 9506
70 Ga0114129_11805602 3300009147 Unclassified 743
71 Ga0105243_10263039 3300009148 Bacteria 1545
72 Ga0105243_10816992 3300009148 Bacteria 920
73 Ga0105241_10053024 3300009174 Bacteria 3100
74 Ga0105248_11621651 3300009177 Bacteria 733
75 Ga0105248_11885867 3300009177 Bacteria 678
76 Ga0105237_10024431 3300009545 Bacteria 6182
77 Ga0105237_10510077 3300009545 Bacteria 1209
78 Ga0105238_10130135 3300009551 Bacteria 2495
79 Ga0105238_12809785 3300009551 Unclassified 523
80 Ga0105249_10117221 3300009553 Bacteria 2525
81 Ga0105035_100826 3300009988 Bacteria 1970
82 Ga0105239_10185657 3300010375 Bacteria 2327
83 Ga0105239_11578241 3300010375 Bacteria 759
84 Ga0157369_11143715 3300013105 Bacteria 795
85 Ga0157374_10189387 3300013296 Bacteria 2012
86 Ga0157378_10406732 3300013297 Bacteria 1342
87 Ga0157372_10242562 3300013307 Bacteria 2091
88 Ga0157372_10553791 3300013307 Unclassified 1341
89 Ga0157372_11724499 3300013307 Bacteria 721
90 Ga0197907_11221627 3300020069 Bacteria 707
91 Ga0206352_10080122 3300020078 Bacteria 714
92 Ga0206350_10989922 3300020080 Bacteria 1254
93 Ga0206353_10421079 3300020082 Bacteria 773
94 Ga0213872_10000458 3300021361 Bacteria 33281
95 Ga0213875_10004633 3300021388 Bacteria 7498
96 Ga0209258_100258 3300025242 Bacteria 92469
97 Ga0209148_1045367 3300025254 Bacteria 590
98 Ga0209759_1003841 3300025256 Bacteria 5822
99 Ga0209455_1000092 3300025272 Bacteria 220516
100 Ga0207692_10063886 3300025898 Bacteria 1915
101 Ga0207699_10008408 3300025906 Bacteria 5092
102 Ga0207705_10211217 3300025909 Bacteria 1472
103 Ga0207705_10390405 3300025909 Bacteria 1076
104 Ga0207684_10000045 3300025910 Bacteria 253128
105 Ga0207684_10973772 3300025910 Bacteria 711
106 Ga0207654_10384983 3300025911 Bacteria 972
107 Ga0207707_10361181 3300025912 Bacteria 1250
108 Ga0207695_10345873 3300025913 Bacteria 1374
109 Ga0207693_10000796 3300025915 Bacteria 28162
110 Ga0207657_10120669 3300025919 Bacteria 2157
111 Ga0207646_10738259 3300025922 Bacteria 879
112 Ga0207681_10407777 3300025923 Bacteria 1099
113 Ga0207694_11526762 3300025924 Unclassified 564
114 Ga0207687_10507474 3300025927 Unclassified 1007
115 Ga0207700_10371370 3300025928 Bacteria 1249
116 Ga0207700_11317574 3300025928 Bacteria 643
117 Ga0207690_10763772 3300025932 Bacteria 797
118 Ga0207686_10086111 3300025934 Bacteria 2063
119 Ga0207709_10127893 3300025935 Bacteria 1726
120 Ga0207670_10446509 3300025936 Bacteria 1042
121 Ga0207670_10596466 3300025936 Bacteria 907
122 Ga0207711_10986833 3300025941 Bacteria 781
123 Ga0207689_10057404 3300025942 Bacteria 3203
124 Ga0207689_10233342 3300025942 Bacteria 1521
125 Ga0207689_10250518 3300025942 Bacteria 1464
126 Ga0207679_10123143 3300025945 Unclassified 2068
127 Ga0207712_10039960 3300025961 Bacteria 3217
128 Ga0207668_10475066 3300025972 Bacteria 1071
129 Ga0207640_10351220 3300025981 Bacteria 1185
130 Ga0207677_10100362 3300026023 Unclassified 2128
131 Ga0207703_10596707 3300026035 Unclassified 1044
132 Ga0207678_10673401 3300026067 Bacteria 910
133 Ga0207708_11049361 3300026075 Bacteria 709
134 Ga0207702_10302661 3300026078 Bacteria 1518
135 Ga0207641_10141483 3300026088 Bacteria 2171
136 Ga0207641_10625417 3300026088 Unclassified 1056
137 Ga0207648_10140021 3300026089 Bacteria 2132
138 Ga0207648_10350263 3300026089 Unclassified 1331
139 Ga0207674_10158130 3300026116 Bacteria 2221
140 Ga0207674_10779864 3300026116 Bacteria 923
141 Ga0207683_10531923 3300026121 Bacteria 1086
142 Ga0209981_1005567 3300027378 Bacteria 1673
143 Ga0209996_1006027 3300027395 Bacteria 1560
144 Ga0209968_1000392 3300027526 Bacteria 7158
145 Ga0209966_1000006 3300027695 Bacteria 102095
146 Ga0209974_10150330 3300027876 Bacteria 840
147 Ga0268266_10151560 3300028379 Unclassified 2090
148 Ga0268264_11722258 3300028381 Bacteria 637
149 Ga0307515_10000066 3300028794 Bacteria 244076
150 Ga0307515_10007182 3300028794 Bacteria 22094
151 Ga0265328_10005293 3300031239 Bacteria 5540
152 Ga0265340_10039638 3300031247 Bacteria 2323
153 Ga0265339_10036451 3300031249 Bacteria 2753
154 Ga0265339_10309795 3300031249 Bacteria 751
155 Ga0265316_10286161 3300031344 Bacteria 1204
156 Ga0307509_10000024 3300031507 Bacteria 237566
157 Ga0307509_10014709 3300031507 Bacteria 9180
158 Ga0307509_10090015 3300031507 Bacteria 3145
159 Ga0307408_102257086 3300031548 Bacteria 527
160 Ga0307508_10271498 3300031616 Bacteria 1290
161 Ga0265314_10025139 3300031711 Bacteria 4499
162 Ga0265314_10115833 3300031711 Bacteria 1695
163 Ga0265342_10067880 3300031712 Bacteria 2085
164 Ga0307516_10067121 3300031730 Bacteria 3457
165 Ga0307516_10152083 3300031730 Bacteria 2073
166 Ga0307410_10677772 3300031852 Bacteria 867
167 Ga0307410_11214772 3300031852 Bacteria 657
168 Ga0307406_10046606 3300031901 Bacteria 2728
169 Ga0307406_10263011 3300031901 Bacteria 1306
170 Ga0307406_10480301 3300031901 Bacteria 1003
171 Ga0307406_10680658 3300031901 Bacteria 857
172 Ga0307406_11444446 3300031901 Bacteria 604
173 Ga0307412_10073055 3300031911 Bacteria 2346
174 Ga0307412_10968399 3300031911 Bacteria 750
175 Ga0307409_100306277 3300031995 Bacteria 1480
176 Ga0307409_100661980 3300031995 Bacteria 1039
177 Ga0307409_101282500 3300031995 Bacteria 757
178 Ga0307416_101572880 3300032002 Bacteria 763
179 Ga0307414_11304960 3300032004 Bacteria 673
180 Ga0307411_10190309 3300032005 Bacteria 1566
181 Ga0307411_10649305 3300032005 Bacteria 913
182 Ga0373934_0479052 3300035086 Bacteria 522
183 Ga0373949_0000005 3300035090 Bacteria 81783
184 Ga0373939_0140070 3300035114 Bacteria 872
185 Ga0373941_0353163 3300035115 Bacteria 599
186 Ga0373960_0169048 3300035121 Bacteria 757
187 Ga0373946_0326104 3300035171 Bacteria 764
188 Ga0373924_0240992 3300035410 Bacteria 800
189 Ga0373931_0314931 3300035691 Bacteria 970
190 Ga0373931_0758168 3300035691 Bacteria 645
191 Ga0373935_0103952 3300035692 Bacteria 1876
192 Ga0373927_0134495 3300035695 Bacteria 1616
193 Ga0373925_0338052 3300037068 Bacteria 1221
194 Ga0395899_0024793 3300037312 Bacteria 4532
195 Ga0395900_0080517 3300037418 Bacteria 3347
196 Ga0436364_0482279 3300037853 Bacteria 14622
197 Ga0395901_0015651 3300038443 Bacteria 7725
198 Ga0436360_0367939 3300039438 Bacteria 867
199 Ga0436360_0872438 3300039438 Bacteria 1168
200 Ga0436360_1165311 3300039438 Bacteria 2513
201 Ga0436361_0420292 3300039447 Bacteria 49111
202 Ga0436361_0456673 3300039447 Bacteria 66535
203 Ga0436363_1492769 3300039450 Bacteria 623
204 Ga0436362_0789701 3300039453 Bacteria 900
205 Ga0451839_0799898 3300041496 Bacteria 1135
206 Ga0439462_0053379 3300042015 Bacteria 1088
207 Ga0439462_0124131 3300042015 Bacteria 719
208 Ga0439464_0224562 3300042439 Bacteria 603
209 Ga0451577_0003233 3300042876 Bacteria 18316
210 Ga0451577_0162635 3300042876 Bacteria 2011
211 Ga0466966_0432807 3300044684 Bacteria 791
212 Ga0466966_0568728 3300044684 Bacteria 682
213 Ga0466963_0025017 3300044694 Bacteria 3804
214 Ga0466968_0390498 3300044735 Bacteria 681
215 Ga0466957_0162910 3300044842 Bacteria 1449
216 Ga0466957_0176091 3300044842 Bacteria 1395
217 Ga0466957_0311802 3300044842 Bacteria 1059
218 Ga0466959_0262047 3300045049 Bacteria 1190
219 Ga0451576_0051578 3300045051 Bacteria 4313
220 Ga0451576_0257601 3300045051 Bacteria 1823
221 Ga0466958_0268640 3300045836 Bacteria 1092
222 Ga0495650_0004980 3300046471 Bacteria 8853
223 Ga0495620_0039585 3300046515 Bacteria 2082
224 Ga0495642_0082883 3300046528 Bacteria 1352
225 Ga0495668_0355757 3300046616 Bacteria 804
226 Ga0495659_0219628 3300046664 Bacteria 784
227 Ga0495683_0003278 3300047323 Bacteria 9462
228 Ga0495684_0252665 3300047471 Bacteria 1282
229 Ga0496101_0909631 3300048904 Bacteria 693
230 Ga0496112_0238935 3300048915 Bacteria 1770
231 Ga0496114_0153295 3300048917 Bacteria 1999
232 Ga0496126_0070692 3300048929 Bacteria 3109
233 Ga0495678_118544 3300049459 Bacteria 892
234 Ga0495682_0149576 3300049460 Bacteria 833
235 Ga0501032_0918171 3300049569 Bacteria 551
236 Ga0501068_0211927 3300049584 Bacteria 1230
237 Ga0501068_0404712 3300049584 Bacteria 880
238 Ga0501070_0179520 3300049586 Bacteria 1743
239 Ga0501071_0432318 3300049587 Bacteria 1007
240 Ga0501079_0491399 3300049741 Bacteria 965
241 Ga0501081_0505629 3300049743 Bacteria 901
242 Ga0501044_0213474 3300049823 Bacteria 1883
243 nmdc:mga03683_145931_c1 3300050489 Bacteria 1066
244 nmdc:mga03683_295306_c1 3300050489 Bacteria 759
245 nmdc:mga03n38_217293_c1 3300050490 Bacteria 996
246 nmdc:mga03n38_476180_c1 3300050490 Bacteria 698
247 nmdc:mga0k408_121952_c1 3300050493 Bacteria 1544
248 nmdc:mga0k408_549405_c1 3300050493 Bacteria 683
249 nmdc:mga06z11_76592_c1 3300050494 Bacteria 1784
250 nmdc:mga06z11_828456_c1 3300050494 Bacteria 564
251 nmdc:mga05p37_31141_c1 3300050507 Bacteria 6515
252 nmdc:mga05p37_748370_c1 3300050507 Bacteria 1078
253 nmdc:mga0qj67_68822_c1 3300050509 Bacteria 2822
254 nmdc:mga08y16_765924_c1 3300050511 Bacteria 960
255 nmdc:mga0n895_1071535_c1 3300050512 Unclassified 784
256 nmdc:mga0n895_1253010_c1 3300050512 Bacteria 714
257 nmdc:mga08x19_145749_c1 3300050514 Bacteria 1601
258 nmdc:mga08x19_66899_c1 3300050514 Bacteria 2336
259 nmdc:mga0a205_209276_c1 3300050515 Bacteria 1839
260 nmdc:mga0sz30_317545_c1 3300050516 Bacteria 695
261 Ga0495601_0834075 3300053077 Bacteria 584
262 Ga0500583_0457081 3300053092 Bacteria 605
263 Ga0500651_0089453 3300053093 Bacteria 1897
264 Ga0500566_0013309 3300053094 Bacteria 4844
265 Ga0500566_0059450 3300053094 Bacteria 2167
266 Ga0500566_0285720 3300053094 Bacteria 783
267 Ga0500640_000172 3300053095 Bacteria 13231
268 Ga0500554_000222 3300053102 Bacteria 12221
269 Ga0500554_156235 3300053102 Bacteria 770
270 Ga0500556_0000075 3300053104 Bacteria 97335
271 Ga0500572_001355 3300053111 Bacteria 6785
272 Ga0500595_000192 3300053119 Bacteria 41638
273 Ga0500595_001156 3300053119 Bacteria 14612
274 Ga0500597_046332 3300053120 Bacteria 1841
275 Ga0500607_236091 3300053121 Bacteria 744
276 Ga0500614_000909 3300053123 Bacteria 7450
277 Ga0500658_0135930 3300053134 Bacteria 1100
278 Ga0500559_0016899 3300053136 Bacteria 3082
279 Ga0500603_001491 3300053150 Bacteria 5334
280 Ga0500636_0205525 3300053177 Bacteria 1038
281 Ga0500611_137162 3300053727 Bacteria 663
282 Ga0500645_015245 3300053730 Bacteria 2437
283 Ga0500601_003690 3300053737 Bacteria 1661
284 Ga0466962_0200656 3300061719 Bacteria 975
285 2739248277 2738543013 Bacteria 5618633
286 Ga0495584_0093925
287 JGI25156J39149_1022569
288 Ga0055535_1000179
289 Ga0055535_1000282
290 Ga0055542_1037194
291 Ga0055529_1000491
292 Ga0070658_10015690
293 Ga0068869_100055872
294 Ga0068869_101020501
295 Ga0068868_100076505
296 Ga0070660_100658740
297 Ga0070689_100715050
298 Ga0070668_100120716
299 Ga0070675_100672796
300 Ga0070671_100348463
301 Ga0070673_100550783
302 Ga0070659_100157381
303 Ga0070667_101088812
304 Ga0070709_10006840
305 Ga0070709_10245806
306 Ga0070713_100000096
307 Ga0070713_100089313
308 Ga0070710_10096329
309 Ga0070694_100650883
310 Ga0070663_101573011
311 Ga0068867_101214918
312 Ga0070706_100000928
313 Ga0070697_100011458
314 Ga0068853_100022588
315 Ga0070696_100002214
316 Ga0070665_100622221
317 Ga0070704_100316361
318 Ga0068855_100917277
319 Ga0070664_100150464
320 Ga0068857_100111614
321 Ga0068854_100316368
322 Ga0068854_100983269
323 Ga0068856_100433338
324 Ga0068856_100645814
325 Ga0068856_101919484
326 Ga0068859_100193497
327 Ga0068866_10025520
328 Ga0068870_10741431
329 Ga0068863_100493605
330 Ga0068858_100160860
331 Ga0068858_100344054
332 Ga0068860_100328345
333 Ga0068860_101111786
334 Ga0068860_101306536
335 Ga0081540_1000180
336 Ga0081540_1215144
337 Ga0070717_10008894
338 Ga0075364_10164890
339 Ga0070712_100053513
340 Ga0075362_10243630
341 Ga0075428_100192634
342 Ga0075430_100264306
343 Ga0075431_100365599
344 Ga0075433_10123983
345 Ga0075436_100087871
346 Ga0097620_100193502
347 Ga0099794_10075997
348 Ga0099795_10000343
349 Ga0099795_10067612
350 Ga0105240_10825350
351 Ga0111539_10437410
352 Ga0105247_10218416
353 Ga0114129_10005694
354 Ga0114129_10020095
355 Ga0114129_11805602
356 Ga0105243_10263039
357 Ga0105243_10816992
358 Ga0105241_10053024
359 Ga0105248_11621651
360 Ga0105248_11885867
361 Ga0105237_10024431
362 Ga0105237_10510077
363 Ga0105238_10130135
364 Ga0105238_12809785
365 Ga0105249_10117221
366 Ga0105035_100826
367 Ga0105239_10185657
368 Ga0105239_11578241
369 Ga0157369_11143715
370 Ga0157374_10189387
371 Ga0157378_10406732
372 Ga0157372_10242562
373 Ga0157372_10553791
374 Ga0157372_11724499
375 Ga0197907_11221627
376 Ga0206352_10080122
377 Ga0206350_10989922
378 Ga0206353_10421079
379 Ga0213872_10000458
380 Ga0213875_10004633
381 Ga0209258_100258
382 Ga0209148_1045367
383 Ga0209759_1003841
384 Ga0209455_1000092
385 Ga0207692_10063886
386 Ga0207699_10008408
387 Ga0207705_10211217
388 Ga0207705_10390405
389 Ga0207684_10000045
390 Ga0207684_10973772
391 Ga0207654_10384983
392 Ga0207707_10361181
393 Ga0207695_10345873
394 Ga0207693_10000796
395 Ga0207657_10120669
396 Ga0207646_10738259
397 Ga0207681_10407777
398 Ga0207694_11526762
399 Ga0207687_10507474
400 Ga0207700_10371370
401 Ga0207700_11317574
402 Ga0207690_10763772
403 Ga0207686_10086111
404 Ga0207709_10127893
405 Ga0207670_10446509
406 Ga0207670_10596466
407 Ga0207711_10986833
408 Ga0207689_10057404
409 Ga0207689_10233342
410 Ga0207689_10250518
411 Ga0207679_10123143
412 Ga0207712_10039960
413 Ga0207668_10475066
414 Ga0207640_10351220
415 Ga0207677_10100362
416 Ga0207703_10596707
417 Ga0207678_10673401
418 Ga0207708_11049361
419 Ga0207702_10302661
420 Ga0207641_10141483
421 Ga0207641_10625417
422 Ga0207648_10140021
423 Ga0207648_10350263
424 Ga0207674_10158130
425 Ga0207674_10779864
426 Ga0207683_10531923
427 Ga0209981_1005567
428 Ga0209996_1006027
429 Ga0209968_1000392
430 Ga0209966_1000006
431 Ga0209974_10150330
432 Ga0268266_10151560
433 Ga0268264_11722258
434 Ga0307515_10000066
435 Ga0307515_10007182
436 Ga0265328_10005293
437 Ga0265340_10039638
438 Ga0265339_10036451
439 Ga0265339_10309795
440 Ga0265316_10286161
441 Ga0307509_10000024
442 Ga0307509_10014709
443 Ga0307509_10090015
444 Ga0307408_102257086
445 Ga0307508_10271498
446 Ga0265314_10025139
447 Ga0265314_10115833
448 Ga0265342_10067880
449 Ga0307516_10067121
450 Ga0307516_10152083
451 Ga0307410_10677772
452 Ga0307410_11214772
453 Ga0307406_10046606
454 Ga0307406_10263011
455 Ga0307406_10480301
456 Ga0307406_10680658
457 Ga0307406_11444446
458 Ga0307412_10073055
459 Ga0307412_10968399
460 Ga0307409_100306277
461 Ga0307409_100661980
462 Ga0307409_101282500
463 Ga0307416_101572880
464 Ga0307414_11304960
465 Ga0307411_10190309
466 Ga0307411_10649305
467 Ga0373934_0479052
468 Ga0373949_0000005
469 Ga0373939_0140070
470 Ga0373941_0353163
471 Ga0373960_0169048
472 Ga0373946_0326104
473 Ga0373924_0240992
474 Ga0373931_0314931
475 Ga0373931_0758168
476 Ga0373935_0103952
477 Ga0373927_0134495
478 Ga0373925_0338052
479 Ga0395899_0024793
480 Ga0395900_0080517
481 Ga0436364_0482279
482 Ga0395901_0015651
483 Ga0436360_0367939
484 Ga0436360_0872438
485 Ga0436360_1165311
486 Ga0436361_0420292
487 Ga0436361_0456673
488 Ga0436363_1492769
489 Ga0436362_0789701
490 Ga0451839_0799898
491 Ga0439462_0053379
492 Ga0439462_0124131
493 Ga0439464_0224562
494 Ga0451577_0003233
495 Ga0451577_0162635
496 Ga0466966_0432807
497 Ga0466966_0568728
498 Ga0466963_0025017
499 Ga0466968_0390498
500 Ga0466957_0162910
501 Ga0466957_0176091
502 Ga0466957_0311802
503 Ga0466959_0262047
504 Ga0451576_0051578
505 Ga0451576_0257601
506 Ga0466958_0268640
507 Ga0495650_0004980
508 Ga0495620_0039585
509 Ga0495642_0082883
510 Ga0495668_0355757
511 Ga0495659_0219628
512 Ga0495683_0003278
513 Ga0495684_0252665
514 Ga0496101_0909631
515 Ga0496112_0238935
516 Ga0496114_0153295
517 Ga0496126_0070692
518 Ga0495678_118544
519 Ga0495682_0149576
520 Ga0501032_0918171
521 Ga0501068_0211927
522 Ga0501068_0404712
523 Ga0501070_0179520
524 Ga0501071_0432318
525 Ga0501079_0491399
526 Ga0501081_0505629
527 Ga0501044_0213474
528 nmdc:mga03683_145931_c1
529 nmdc:mga03683_295306_c1
530 nmdc:mga03n38_217293_c1
531 nmdc:mga03n38_476180_c1
532 nmdc:mga0k408_121952_c1
533 nmdc:mga0k408_549405_c1
534 nmdc:mga06z11_76592_c1
535 nmdc:mga06z11_828456_c1
536 nmdc:mga05p37_31141_c1
537 nmdc:mga05p37_748370_c1
538 nmdc:mga0qj67_68822_c1
539 nmdc:mga08y16_765924_c1
540 nmdc:mga0n895_1071535_c1
541 nmdc:mga0n895_1253010_c1
542 nmdc:mga08x19_145749_c1
543 nmdc:mga08x19_66899_c1
544 nmdc:mga0a205_209276_c1
545 nmdc:mga0sz30_317545_c1
546 Ga0495601_0834075
547 Ga0500583_0457081
548 Ga0500651_0089453
549 Ga0500566_0013309
550 Ga0500566_0059450
551 Ga0500566_0285720
552 Ga0500640_000172
553 Ga0500554_000222
554 Ga0500554_156235
555 Ga0500556_0000075
556 Ga0500572_001355
557 Ga0500595_000192
558 Ga0500595_001156
559 Ga0500597_046332
560 Ga0500607_236091
561 Ga0500614_000909
562 Ga0500658_0135930
563 Ga0500559_0016899
564 Ga0500603_001491
565 Ga0500636_0205525
566 Ga0500611_137162
567 Ga0500645_015245
568 Ga0500601_003690
569 Ga0466962_0200656
570 2739248277

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07883

Cupin_2

Cupin domain

83

156

0.9

PF00190

Cupin_1

Cupin

77

175

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d82-assembly1.cif.gz_E crystal structure of a cupin-2 domain containing protein (sfri_3543) from shewanella frigidimarina ncimb 400 at 2.05 a resolution 0.8743 43 124
5ono-assembly1.cif.gz_A crystal structure of ectoine synthase from p. lautus 0.8618 43 123
8hfb-assembly1.cif.gz_B evolved variant of quercetin 2,4-dioxygenase from bacillus subtilis 0.8526 45 123
1sfn-assembly1.cif.gz_A crystal structure of protein dr1152 from deinococcus radiodurans r1, pfam duf861 0.8497 45 126
5wsf-assembly2.cif.gz_C crystal structure of a cupin protein (tm1459) in osmium (os)-substituted form ii 0.8454 42 123
ID Description Score Start End Superfamily
af_Q2G2A6_62_177_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9026 45 125 2.60.120.10
af_A0A1D8PPZ7_421_512_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8951 45 125 2.60.120.10
af_Q03188_852_942_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8775 42 124 2.60.120.10
5j7mB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8719 45 123 2.60.120.10
af_Q9USR9_537_626_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8698 41 124 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A7W1NSL9-F1-model_v4 Cupin domain-containing protein 0.896 41 123
AF-A0A832BZL0-F1-model_v4 deleted 0.8954 45 123
AF-A0A2E9ARY1-F1-model_v4 Cupin 0.8932 45 124
AF-A0A327HQN2-F1-model_v4 Cupin 0.8931 45 124
AF-A0A2E2VFP7-F1-model_v4 Cupin type-2 domain-containing protein 0.8928 45 124

Map