F378843

General Info

Members Datasets Scaffolds Average Seq Length
273 173 546 204

Family's Representative Sequence

Representative Sequence 3300005340|Ga0070689_100154183|Ga0070689_1001541833
Length 217
Sequence MAGMKDCCEIRTDIPDRQRRVLQIVLWINAAMFLAEFGAGVLAHSTALIADSVDMLGDAIVYGFSLYVVARGAAWQAKAALLKGAIMATFGVGVLAEVALKIARGVVPSADLMSAVGFVALAANVFCLGLLARRREDDINMRSAWVCSRNDVVANVGVLLAAGAVALTGSAWPDILMGLLIATLFGTSAIGVIRGARRELERPVPVLVAPRVPGTSE

Samples

Sample ID Description Type Environment
1 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
2 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
78 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
81 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
82 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
83 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
84 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
92 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
93 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
94 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
95 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
96 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
97 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
98 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
99 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
100 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
101 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
102 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
103 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
104 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
105 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
106 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
107 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
108 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
111 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
112 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
113 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
114 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
115 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
116 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
117 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
118 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
122 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
123 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
124 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
125 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
126 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
127 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
128 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
149 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
150 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
158 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
167 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
168 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
171 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
172 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
173 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.63
Metatranscriptomes 0
Isolates 0.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.56
Nodule 0
Rhizoplane 2.2
Rhizosphere 86.81
Stem 0
Stem Tuber 0
Unclassified 15.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070689_100154183 3300005340 Bacteria 1854
2 Ga0055530_10000729 3300003791 Bacteria 27524
3 Ga0055540_1002800 3300003792 Bacteria 8922
4 Ga0055531_10000747 3300003794 Bacteria 27378
5 Ga0065707_10328190 3300005295 Eukaryota 954
6 Ga0070690_100122937 3300005330 Bacteria 1744
7 Ga0070691_10002950 3300005341 Bacteria 7625
8 Ga0070692_10338073 3300005345 Bacteria 931
9 Ga0070669_100134140 3300005353 Bacteria 1903
10 Ga0070673_100117113 3300005364 Bacteria 2217
11 Ga0070673_100465952 3300005364 Unclassified 1138
12 Ga0070659_100033566 3300005366 Bacteria 3986
13 Ga0070694_100018846 3300005444 Bacteria 4384
14 Ga0070694_100082940 3300005444 Bacteria 2233
15 Ga0070694_100153757 3300005444 Bacteria 1682
16 Ga0070708_100174126 3300005445 Unclassified 2010
17 Ga0070662_100043782 3300005457 Bacteria 3204
18 Ga0070662_100218284 3300005457 Bacteria 1520
19 Ga0070662_100218527 3300005457 Bacteria 1519
20 Ga0070681_10153051 3300005458 Bacteria 2232
21 Ga0070706_100091182 3300005467 Bacteria 2826
22 Ga0070706_100448438 3300005467 Unclassified 1201
23 Ga0070707_100038404 3300005468 Bacteria 4573
24 Ga0070707_100460966 3300005468 Unclassified 1232
25 Ga0070707_100479152 3300005468 Bacteria 1206
26 Ga0070698_100135488 3300005471 Bacteria 2417
27 Ga0070698_100268008 3300005471 Unclassified 1639
28 Ga0070699_100190969 3300005518 Unclassified 1819
29 Ga0070699_100302302 3300005518 Unclassified 1435
30 Ga0070697_100012340 3300005536 Bacteria 6693
31 Ga0070697_100015075 3300005536 Bacteria 6066
32 Ga0070695_100001146 3300005545 Bacteria 14540
33 Ga0070695_100214037 3300005545 Unclassified 1385
34 Ga0070696_100037501 3300005546 Bacteria 3344
35 Ga0070696_100127237 3300005546 Bacteria 1850
36 Ga0070704_100042039 3300005549 Bacteria 3159
37 Ga0070704_100262366 3300005549 Bacteria 1424
38 Ga0068859_100135657 3300005617 Bacteria 2534
39 Ga0068859_100225164 3300005617 Bacteria 1963
40 Ga0068859_100582876 3300005617 Bacteria 1212
41 Ga0068866_10112774 3300005718 Bacteria 1520
42 Ga0068866_10324439 3300005718 Bacteria 970
43 Ga0068863_100179649 3300005841 Bacteria 2031
44 Ga0068860_100000944 3300005843 Bacteria 32201
45 Ga0075428_100050581 3300006844 Bacteria 4557
46 Ga0075430_100014637 3300006846 Bacteria 6682
47 Ga0075431_100009332 3300006847 Bacteria 9846
48 Ga0075431_100080535 3300006847 Unclassified 3362
49 Ga0075431_100231050 3300006847 Bacteria 1885
50 Ga0075433_10018328 3300006852 Bacteria 5816
51 Ga0075434_100002678 3300006871 Bacteria 15733
52 Ga0075434_100012884 3300006871 Bacteria 7943
53 Ga0075429_100014612 3300006880 Bacteria 6805
54 Ga0097620_100135657 3300006931 Bacteria 2534
55 Ga0097620_100225177 3300006931 Bacteria 1963
56 Ga0097620_100582835 3300006931 Bacteria 1212
57 Ga0075435_100001578 3300007076 Bacteria 14702
58 Ga0111539_10004043 3300009094 Bacteria 19252
59 Ga0105247_10007438 3300009101 Bacteria 6716
60 Ga0114129_10005917 3300009147 Bacteria 17308
61 Ga0114129_10033005 3300009147 Bacteria 7316
62 Ga0114129_10078103 3300009147 Bacteria 4604
63 Ga0114129_10080005 3300009147 Plasmid 4544
64 Ga0114129_10123618 3300009147 Bacteria 3559
65 Ga0114129_10124752 3300009147 Bacteria 3541
66 Ga0114129_10345335 3300009147 Unclassified 1973
67 Ga0114129_11427568 3300009147 Bacteria 853
68 Ga0105242_10206913 3300009176 Bacteria 1746
69 Ga0105248_10497919 3300009177 Unclassified 1374
70 Ga0105249_10000103 3300009553 Bacteria 118397
71 Ga0105249_10386925 3300009553 Bacteria 1426
72 Ga0105249_10785157 3300009553 Bacteria 1016
73 Ga0157378_10101278 3300013297 Bacteria 2631
74 Ga0157378_10194684 3300013297 Bacteria 1914
75 Ga0157378_10770846 3300013297 Bacteria 986
76 Ga0157380_10352948 3300014326 Bacteria 1377
77 Ga0163161_10857073 3300017792 Bacteria 767
78 Ga0209676_1001170 3300025292 Bacteria 28411
79 Ga0209050_1000001 3300025298 Bacteria 3563507
80 Ga0209051_1000279 3300025303 Bacteria 83677
81 Ga0209257_1001116 3300025304 Bacteria 34728
82 Ga0207710_10010698 3300025900 Bacteria 3863
83 Ga0207710_10045868 3300025900 Bacteria 1950
84 Ga0207647_10063693 3300025904 Bacteria 2242
85 Ga0207684_10003128 3300025910 Bacteria 16305
86 Ga0207684_10071317 3300025910 Bacteria 2952
87 Ga0207684_10216833 3300025910 Unclassified 1651
88 Ga0207707_10262724 3300025912 Bacteria 1498
89 Ga0207646_10001729 3300025922 Bacteria 26558
90 Ga0207646_10018183 3300025922 Bacteria 6560
91 Ga0207646_10188943 3300025922 Unclassified 1860
92 Ga0207646_10515562 3300025922 Bacteria 1076
93 Ga0207646_10892580 3300025922 Bacteria 789
94 Ga0207681_10043196 3300025923 Bacteria 3016
95 Ga0207690_10035659 3300025932 Bacteria 3216
96 Ga0207706_10183415 3300025933 Bacteria 1838
97 Ga0207670_10059886 3300025936 Bacteria 2592
98 Ga0207651_10063394 3300025960 Bacteria 2581
99 Ga0207712_10000069 3300025961 Bacteria 127318
100 Ga0207658_10817265 3300025986 Unclassified 847
101 Ga0207641_10159176 3300026088 Bacteria 2051
102 Ga0207648_10127446 3300026089 Bacteria 2239
103 Ga0207648_10679142 3300026089 Unclassified 953
104 Ga0209981_1010462 3300027378 Unclassified 1272
105 Ga0209995_1001378 3300027471 Bacteria 3745
106 Ga0209968_1000981 3300027526 Bacteria 4387
107 Ga0209999_1000576 3300027543 Bacteria 5780
108 Ga0209982_1000942 3300027552 Bacteria 3837
109 Ga0209970_1002073 3300027614 Bacteria 3442
110 Ga0209983_1002215 3300027665 Bacteria 4279
111 Ga0209971_1000065 3300027682 Bacteria 33190
112 Ga0209966_1000064 3300027695 Bacteria 47544
113 Ga0209998_10000164 3300027717 Bacteria 24509
114 Ga0209974_10000650 3300027876 Bacteria 11762
115 Ga0207428_10678325 3300027907 Bacteria 738
116 Ga0268265_10000739 3300028380 Bacteria 31842
117 Ga0268264_10002308 3300028381 Bacteria 16874
118 Ga0307513_10005226 3300031456 Bacteria 17195
119 Ga0307405_10812382 3300031731 Bacteria 784
120 Ga0307416_101272995 3300032002 Unclassified 841
121 Ga0307411_10323533 3300032005 Unclassified 1246
122 Ga0373959_0014590 3300034820 Bacteria 1432
123 Ga0373940_0076956 3300035088 Bacteria 980
124 Ga0373949_0018262 3300035090 Bacteria 1588
125 Ga0373931_0023058 3300035691 Bacteria 3139
126 Ga0395899_0088338 3300037312 Bacteria 2249
127 Ga0395900_0015252 3300037418 Bacteria 7836
128 Ga0395898_0030832 3300037466 Bacteria 5363
129 Ga0395905_0492437 3300037471 Unclassified 1126
130 Ga0395901_0002035 3300038443 Bacteria 20774
131 Ga0436365_1226787 3300039437 Bacteria 1421
132 Ga0439448_0001409 3300042005 Bacteria 6203
133 Ga0439463_053023 3300042016 Bacteria 1035
134 Ga0439464_0004921 3300042439 Bacteria 3432
135 Ga0439460_0001971 3300042461 Bacteria 4910
136 Ga0451577_0058280 3300042876 Bacteria 3443
137 Ga0451577_0250906 3300042876 Bacteria 1602
138 Ga0451577_0484149 3300042876 Unclassified 1123
139 Ga0453683_0119398 3300044673 Bacteria 1659
140 Ga0453684_0587763 3300044712 Bacteria 1222
141 Ga0453684_0817827 3300044712 Bacteria 1004
142 Ga0451576_0059872 3300045051 Bacteria 3974
143 Ga0451576_0294735 3300045051 Bacteria 1696
144 Ga0451576_0894840 3300045051 Bacteria 931
145 Ga0495638_0029174 3300046460 Bacteria 3558
146 Ga0495580_0000018 3300046472 Bacteria 92458
147 Ga0495605_0118350 3300046474 Bacteria 1203
148 Ga0495584_0051871 3300046491 Bacteria 2064
149 Ga0495584_0066366 3300046491 Unclassified 1815
150 Ga0495607_0010693 3300046501 Bacteria 6150
151 Ga0495616_0014212 3300046513 Bacteria 4465
152 Ga0495632_0000633 3300046519 Bacteria 32402
153 Ga0495643_0000093 3300046522 Bacteria 152412
154 Ga0495642_0208089 3300046528 Bacteria 853
155 Ga0495668_0167248 3300046616 Bacteria 1204
156 Ga0495625_0050960 3300046660 Bacteria 2968
157 Ga0495659_0001191 3300046664 Bacteria 9039
158 Ga0495659_0010220 3300046664 Bacteria 3007
159 Ga0495659_0067940 3300046664 Unclassified 1330
160 Ga0495661_0014659 3300046665 Bacteria 5249
161 Ga0495649_0014585 3300046694 Bacteria 4498
162 Ga0495589_0080691 3300046794 Bacteria 1583
163 Ga0495660_0223623 3300046810 Bacteria 886
164 Ga0495636_0007280 3300047318 Bacteria 4355
165 Ga0495687_017828 3300047443 Bacteria 3526
166 Ga0495677_0008793 3300047445 Bacteria 3742
167 Ga0495679_060068 3300047446 Bacteria 1117
168 Ga0496102_0020506 3300048905 Bacteria 5841
169 Ga0496102_1131392 3300048905 Unclassified 703
170 Ga0496104_0071787 3300048907 Bacteria 3291
171 Ga0496105_0021126 3300048908 Bacteria 5265
172 Ga0496113_0006843 3300048916 Bacteria 7272
173 Ga0496113_0303804 3300048916 Bacteria 1278
174 Ga0496116_0003006 3300048919 Bacteria 17088
175 Ga0496117_0003654 3300048920 Bacteria 17693
176 Ga0496118_0004426 3300048921 Bacteria 16673
177 Ga0496119_0051086 3300048922 Bacteria 2543
178 Ga0496120_0017238 3300048923 Bacteria 4690
179 Ga0496120_0027648 3300048923 Bacteria 3484
180 Ga0496121_0029197 3300048924 Bacteria 5109
181 Ga0496121_0584244 3300048924 Bacteria 692
182 Ga0496122_0003504 3300048925 Bacteria 20615
183 Ga0496122_0007929 3300048925 Bacteria 11622
184 Ga0496122_0013920 3300048925 Bacteria 7822
185 Ga0496122_0022661 3300048925 Bacteria 5574
186 Ga0496123_0000190 3300048926 Bacteria 124705
187 Ga0496123_0002818 3300048926 Bacteria 20615
188 Ga0496123_0006362 3300048926 Bacteria 11465
189 Ga0496123_0017071 3300048926 Bacteria 5860
190 Ga0496123_0040439 3300048926 Bacteria 3246
191 Ga0496124_0004246 3300048927 Bacteria 16862
192 Ga0496125_0004998 3300048928 Bacteria 14973
193 Ga0496126_0004907 3300048929 Bacteria 15628
194 Ga0496126_0332057 3300048929 Bacteria 1247
195 Ga0501031_0745104 3300049568 Bacteria 628
196 Ga0501034_0231478 3300049571 Bacteria 1797
197 Ga0501034_1455969 3300049571 Bacteria 559
198 Ga0501036_0022247 3300049572 Bacteria 5332
199 Ga0501036_0403624 3300049572 Bacteria 1140
200 Ga0501037_0048737 3300049573 Unclassified 3103
201 Ga0501038_0000936 3300049574 Bacteria 26022
202 Ga0501039_0112415 3300049575 Unclassified 2129
203 Ga0501039_0360389 3300049575 Unclassified 1142
204 Ga0501039_0424014 3300049575 Bacteria 1045
205 Ga0501040_0091927 3300049576 Bacteria 2109
206 Ga0501040_0493094 3300049576 Bacteria 883
207 Ga0501040_0598073 3300049576 Bacteria 797
208 Ga0501041_0033411 3300049577 Unclassified 3112
209 Ga0501042_0001501 3300049578 Bacteria 13774
210 Ga0501043_0178105 3300049579 Bacteria 1657
211 Ga0501046_0016125 3300049580 Bacteria 6266
212 Ga0501048_0010304 3300049582 Bacteria 6987
213 Ga0501048_0579588 3300049582 Unclassified 805
214 Ga0501069_0059059 3300049585 Bacteria 2140
215 Ga0501070_0157938 3300049586 Bacteria 1870
216 Ga0501071_0010609 3300049587 Bacteria 6179
217 Ga0501071_0089108 3300049587 Bacteria 2264
218 Ga0501071_0160910 3300049587 Bacteria 1678
219 Ga0501072_0005110 3300049588 Bacteria 9976
220 Ga0501072_0006969 3300049588 Bacteria 8577
221 Ga0501072_0271500 3300049588 Bacteria 1349
222 Ga0501073_0290940 3300049589 Bacteria 1127
223 Ga0501074_0081134 3300049590 Unclassified 2326
224 Ga0501075_0001164 3300049591 Bacteria 17018
225 Ga0501075_0354478 3300049591 Bacteria 1118
226 Ga0501075_0434829 3300049591 Unclassified 1001
227 Ga0501075_0745635 3300049591 Bacteria 745
228 Ga0501076_0010034 3300049592 Bacteria 7007
229 Ga0501076_0040274 3300049592 Bacteria 3671
230 Ga0501076_0059133 3300049592 Bacteria 3048
231 Ga0501077_0006512 3300049593 Bacteria 7168
232 Ga0501079_0642934 3300049741 Unclassified 835
233 Ga0501080_0009339 3300049742 Bacteria 8942
234 Ga0501080_0036534 3300049742 Bacteria 4585
235 Ga0501081_0009601 3300049743 Bacteria 6308
236 Ga0501081_0421323 3300049743 Bacteria 990
237 Ga0501083_0007473 3300049744 Bacteria 7741
238 Ga0501083_0009024 3300049744 Bacteria 7038
239 Ga0501035_0109602 3300049822 Unclassified 2420
240 Ga0501044_0432157 3300049823 Bacteria 1225
241 Ga0501045_0002582 3300049824 Bacteria 12356
242 nmdc:mga05p37_1113_c1 3300050507 Bacteria 28074
243 nmdc:mga05p37_153503_c1 3300050507 Bacteria 2815
244 nmdc:mga05p37_631184_c1 3300050507 Unclassified 1204
245 nmdc:mga09592_318910_c1 3300050508 Bacteria 1346
246 nmdc:mga09592_391082_c1 3300050508 Archaea 1202
247 nmdc:mga0qj67_12663_c1 3300050509 Bacteria 6359
248 nmdc:mga06r32_216834_c1 3300050510 Bacteria 1901
249 nmdc:mga06r32_4054_c1 3300050510 Bacteria 13138
250 nmdc:mga0n895_121626_c1 3300050512 Unclassified 2632
251 nmdc:mga0n895_242491_c1 3300050512 Bacteria 1829
252 nmdc:mga0n895_331203_c1 3300050512 Unclassified 1543
253 nmdc:mga0n895_37373_c1 3300050512 Unclassified 4697
254 nmdc:mga0n895_850559_c1 3300050512 Unclassified 900
255 nmdc:mga0n895_9661_c1 3300050512 Bacteria 8456
256 nmdc:mga0n895_974995_c1 3300050512 Bacteria 830
257 nmdc:mga0rr50_14070_c1 3300050513 Bacteria 5234
258 nmdc:mga0rr50_19646_c1 3300050513 Bacteria 4567
259 nmdc:mga0rr50_213191_c1 3300050513 Unclassified 1592
260 nmdc:mga08x19_377564_c1 3300050514 Unclassified 992
261 nmdc:mga0a205_10846_c1 3300050515 Bacteria 8383
262 nmdc:mga0a205_160468_c1 3300050515 Bacteria 2145
263 nmdc:mga0a205_199611_c1 3300050515 Unclassified 1891
264 nmdc:mga0a205_353614_c1 3300050515 Bacteria 1336
265 nmdc:mga0a205_629645_c1 3300050515 Bacteria 925
266 nmdc:mga0a205_65718_c1 3300050515 Bacteria 3505
267 Ga0501084_0016117 3300054114 Bacteria 6204
268 Ga0501082_0004240 3300060353 Bacteria 12530
269 Ga0501082_0010408 3300060353 Bacteria 8007
270 Ga0501082_0170563 3300060353 Bacteria 1892
271 Ga0501082_0965215 3300060353 Unclassified 745
272 Ga0530510_0000580 3300061734 Bacteria 23480
273 2511130476 2510917021 Bacteria 5705459
274 Ga0070689_100154183
275 Ga0055530_10000729
276 Ga0055540_1002800
277 Ga0055531_10000747
278 Ga0065707_10328190
279 Ga0070690_100122937
280 Ga0070691_10002950
281 Ga0070692_10338073
282 Ga0070669_100134140
283 Ga0070673_100117113
284 Ga0070673_100465952
285 Ga0070659_100033566
286 Ga0070694_100018846
287 Ga0070694_100082940
288 Ga0070694_100153757
289 Ga0070708_100174126
290 Ga0070662_100043782
291 Ga0070662_100218284
292 Ga0070662_100218527
293 Ga0070681_10153051
294 Ga0070706_100091182
295 Ga0070706_100448438
296 Ga0070707_100038404
297 Ga0070707_100460966
298 Ga0070707_100479152
299 Ga0070698_100135488
300 Ga0070698_100268008
301 Ga0070699_100190969
302 Ga0070699_100302302
303 Ga0070697_100012340
304 Ga0070697_100015075
305 Ga0070695_100001146
306 Ga0070695_100214037
307 Ga0070696_100037501
308 Ga0070696_100127237
309 Ga0070704_100042039
310 Ga0070704_100262366
311 Ga0068859_100135657
312 Ga0068859_100225164
313 Ga0068859_100582876
314 Ga0068866_10112774
315 Ga0068866_10324439
316 Ga0068863_100179649
317 Ga0068860_100000944
318 Ga0075428_100050581
319 Ga0075430_100014637
320 Ga0075431_100009332
321 Ga0075431_100080535
322 Ga0075431_100231050
323 Ga0075433_10018328
324 Ga0075434_100002678
325 Ga0075434_100012884
326 Ga0075429_100014612
327 Ga0097620_100135657
328 Ga0097620_100225177
329 Ga0097620_100582835
330 Ga0075435_100001578
331 Ga0111539_10004043
332 Ga0105247_10007438
333 Ga0114129_10005917
334 Ga0114129_10033005
335 Ga0114129_10078103
336 Ga0114129_10080005
337 Ga0114129_10123618
338 Ga0114129_10124752
339 Ga0114129_10345335
340 Ga0114129_11427568
341 Ga0105242_10206913
342 Ga0105248_10497919
343 Ga0105249_10000103
344 Ga0105249_10386925
345 Ga0105249_10785157
346 Ga0157378_10101278
347 Ga0157378_10194684
348 Ga0157378_10770846
349 Ga0157380_10352948
350 Ga0163161_10857073
351 Ga0209676_1001170
352 Ga0209050_1000001
353 Ga0209051_1000279
354 Ga0209257_1001116
355 Ga0207710_10010698
356 Ga0207710_10045868
357 Ga0207647_10063693
358 Ga0207684_10003128
359 Ga0207684_10071317
360 Ga0207684_10216833
361 Ga0207707_10262724
362 Ga0207646_10001729
363 Ga0207646_10018183
364 Ga0207646_10188943
365 Ga0207646_10515562
366 Ga0207646_10892580
367 Ga0207681_10043196
368 Ga0207690_10035659
369 Ga0207706_10183415
370 Ga0207670_10059886
371 Ga0207651_10063394
372 Ga0207712_10000069
373 Ga0207658_10817265
374 Ga0207641_10159176
375 Ga0207648_10127446
376 Ga0207648_10679142
377 Ga0209981_1010462
378 Ga0209995_1001378
379 Ga0209968_1000981
380 Ga0209999_1000576
381 Ga0209982_1000942
382 Ga0209970_1002073
383 Ga0209983_1002215
384 Ga0209971_1000065
385 Ga0209966_1000064
386 Ga0209998_10000164
387 Ga0209974_10000650
388 Ga0207428_10678325
389 Ga0268265_10000739
390 Ga0268264_10002308
391 Ga0307513_10005226
392 Ga0307405_10812382
393 Ga0307416_101272995
394 Ga0307411_10323533
395 Ga0373959_0014590
396 Ga0373940_0076956
397 Ga0373949_0018262
398 Ga0373931_0023058
399 Ga0395899_0088338
400 Ga0395900_0015252
401 Ga0395898_0030832
402 Ga0395905_0492437
403 Ga0395901_0002035
404 Ga0436365_1226787
405 Ga0439448_0001409
406 Ga0439463_053023
407 Ga0439464_0004921
408 Ga0439460_0001971
409 Ga0451577_0058280
410 Ga0451577_0250906
411 Ga0451577_0484149
412 Ga0453683_0119398
413 Ga0453684_0587763
414 Ga0453684_0817827
415 Ga0451576_0059872
416 Ga0451576_0294735
417 Ga0451576_0894840
418 Ga0495638_0029174
419 Ga0495580_0000018
420 Ga0495605_0118350
421 Ga0495584_0051871
422 Ga0495584_0066366
423 Ga0495607_0010693
424 Ga0495616_0014212
425 Ga0495632_0000633
426 Ga0495643_0000093
427 Ga0495642_0208089
428 Ga0495668_0167248
429 Ga0495625_0050960
430 Ga0495659_0001191
431 Ga0495659_0010220
432 Ga0495659_0067940
433 Ga0495661_0014659
434 Ga0495649_0014585
435 Ga0495589_0080691
436 Ga0495660_0223623
437 Ga0495636_0007280
438 Ga0495687_017828
439 Ga0495677_0008793
440 Ga0495679_060068
441 Ga0496102_0020506
442 Ga0496102_1131392
443 Ga0496104_0071787
444 Ga0496105_0021126
445 Ga0496113_0006843
446 Ga0496113_0303804
447 Ga0496116_0003006
448 Ga0496117_0003654
449 Ga0496118_0004426
450 Ga0496119_0051086
451 Ga0496120_0017238
452 Ga0496120_0027648
453 Ga0496121_0029197
454 Ga0496121_0584244
455 Ga0496122_0003504
456 Ga0496122_0007929
457 Ga0496122_0013920
458 Ga0496122_0022661
459 Ga0496123_0000190
460 Ga0496123_0002818
461 Ga0496123_0006362
462 Ga0496123_0017071
463 Ga0496123_0040439
464 Ga0496124_0004246
465 Ga0496125_0004998
466 Ga0496126_0004907
467 Ga0496126_0332057
468 Ga0501031_0745104
469 Ga0501034_0231478
470 Ga0501034_1455969
471 Ga0501036_0022247
472 Ga0501036_0403624
473 Ga0501037_0048737
474 Ga0501038_0000936
475 Ga0501039_0112415
476 Ga0501039_0360389
477 Ga0501039_0424014
478 Ga0501040_0091927
479 Ga0501040_0493094
480 Ga0501040_0598073
481 Ga0501041_0033411
482 Ga0501042_0001501
483 Ga0501043_0178105
484 Ga0501046_0016125
485 Ga0501048_0010304
486 Ga0501048_0579588
487 Ga0501069_0059059
488 Ga0501070_0157938
489 Ga0501071_0010609
490 Ga0501071_0089108
491 Ga0501071_0160910
492 Ga0501072_0005110
493 Ga0501072_0006969
494 Ga0501072_0271500
495 Ga0501073_0290940
496 Ga0501074_0081134
497 Ga0501075_0001164
498 Ga0501075_0354478
499 Ga0501075_0434829
500 Ga0501075_0745635
501 Ga0501076_0010034
502 Ga0501076_0040274
503 Ga0501076_0059133
504 Ga0501077_0006512
505 Ga0501079_0642934
506 Ga0501080_0009339
507 Ga0501080_0036534
508 Ga0501081_0009601
509 Ga0501081_0421323
510 Ga0501083_0007473
511 Ga0501083_0009024
512 Ga0501035_0109602
513 Ga0501044_0432157
514 Ga0501045_0002582
515 nmdc:mga05p37_1113_c1
516 nmdc:mga05p37_153503_c1
517 nmdc:mga05p37_631184_c1
518 nmdc:mga09592_318910_c1
519 nmdc:mga09592_391082_c1
520 nmdc:mga0qj67_12663_c1
521 nmdc:mga06r32_216834_c1
522 nmdc:mga06r32_4054_c1
523 nmdc:mga0n895_121626_c1
524 nmdc:mga0n895_242491_c1
525 nmdc:mga0n895_331203_c1
526 nmdc:mga0n895_37373_c1
527 nmdc:mga0n895_850559_c1
528 nmdc:mga0n895_9661_c1
529 nmdc:mga0n895_974995_c1
530 nmdc:mga0rr50_14070_c1
531 nmdc:mga0rr50_19646_c1
532 nmdc:mga0rr50_213191_c1
533 nmdc:mga08x19_377564_c1
534 nmdc:mga0a205_10846_c1
535 nmdc:mga0a205_160468_c1
536 nmdc:mga0a205_199611_c1
537 nmdc:mga0a205_353614_c1
538 nmdc:mga0a205_629645_c1
539 nmdc:mga0a205_65718_c1
540 Ga0501084_0016117
541 Ga0501082_0004240
542 Ga0501082_0010408
543 Ga0501082_0170563
544 Ga0501082_0965215
545 Ga0530510_0000580
546 2511130476

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01545

Cation_efflux

Cation efflux family

22

200

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
8f6h-assembly1.cif.gz_B cryo-em structure of a zinc-loaded asymmetrical tmd d70a mutant of the yiip-fab complex 0.8894 23 203
8f6k-assembly1.cif.gz_D cryo-em structure of a zinc-loaded h263a/d287a mutant of the yiip-fab complex 0.876 21 206
5vrf-assembly1.cif.gz_A cryoem structure of the zinc transporter yiip from helical crystals 0.8241 21 214
8f6i-assembly1.cif.gz_A cryo-em structure of a zinc-loaded symmetrical d70a mutant of the yiip-fab complex 0.8232 25 214
8f6i-assembly1.cif.gz_B cryo-em structure of a zinc-loaded symmetrical d70a mutant of the yiip-fab complex 0.8143 25 203
ID Description Score Start End Superfamily
af_P96876_30_219_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.8897 21 199 1.20.1510.10
af_Q9M271_29_255_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.8861 24 203 1.20.1510.10
af_Q9VKA3_337_568_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.868 23 200 1.20.1510.10
af_P75757_17_213_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.8604 23 203 1.20.1510.10
af_O35149_110_332_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.8597 24 203 1.20.1510.10
ID Description Score Start End GO Terms
AF-A0A1H6JCZ5-F1-model_v4 Cation transporter 0.9826 11 206 GO:0006829
GO:0008324
GO:0016020
AF-A0A0K2ZWN2-F1-model_v4 Cation diffusion facilitator 0.9784 10 205 GO:0016020
AF-A0A1Q2M914-F1-model_v4 Cation transporter 0.9765 18 205 GO:0005385
GO:0005886
AF-A0A522GG21-F1-model_v4 Cation transporter 0.9745 20 205 GO:0008324
GO:0016020
AF-A0A2E6GL45-F1-model_v4 Cation transporter 0.9722 21 203 GO:0005385
GO:0005886

Map