F356368

General Info

Members Datasets Scaffolds Average Seq Length
244 166 233 270

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10065338|Ga0075364_100653382
Length 314
Sequence MLPPAANAAPRRSLGTRLAVAVVLGVLVLGAAREKLTPIEAVILGVVEGVTEFLPISSTGHLLITNDLLGIGTGSPEEKEAADAYAIVIQAGAILAVVVLYWRRLLSMVNGLLGRDPDGRRVLVNLVVAFLPAVVVGVALESEIKERLFGPWPVVAAWAIGGAALLWLSSGDWWARQKEGRGLEQMGWRQALIIGLVQCLAMWPGTSRSLVVLVAAILVGMSLAASVEFSFLLGLVTLSAATVFDAAKSGDVIVEQFGVAAPVIGFVTAFVAAVIAVRWMVGYLQNHSLAIFGWYRLGVAAVTAVLIFTSVIEV

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
3 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
4 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
5 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
6 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
7 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
8 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
9 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
16 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
100 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
101 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
102 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
108 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
109 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
112 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
115 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
118 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
119 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
120 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
121 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
124 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
127 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
133 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
134 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
135 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
136 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
137 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
138 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
139 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
142 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
143 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
144 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
145 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
146 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
147 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
148 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
149 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
150 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
151 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
152 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
153 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
154 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
155 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
156 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
157 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
158 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
159 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
160 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
161 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
162 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
163 8007371054 Clostridium sp. YIM B02515 Isolate Unclassified
164 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified
165 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
166 8054795415 Paenibacillus periandrae PM10 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.49
Metatranscriptomes 0
Isolates 4.51

Biome Distribution

Category Percentage (%)
Aerial Root 0.82
Bulb 0
Endosphere 4.1
Nodule 0.41
Rhizoplane 2.87
Rhizosphere 85.66
Stem 0
Stem Tuber 0
Unclassified 6.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_2974371 2162886006 Bacteria 1336
2 JGI24752J21851_1000925 3300001976 Bacteria 4003
3 rootH1_10004736 3300003316 Bacteria 18150
4 rootH2_10217181 3300003320 Bacteria 1932
5 rootL2_10200705 3300003322 Bacteria 8765
6 rootL2_10285299 3300003322 Unclassified 2212
7 rootH1_10003785 3300003323 Bacteria 131157
8 rootH1_10100757 3300003323 Bacteria 2872
9 rootH1_10178832 3300003323 Unclassified 3830
10 Ga0065704_10077651 3300005289 Bacteria 4670
11 Ga0065712_10110467 3300005290 Bacteria 1836
12 Ga0065715_10139722 3300005293 Bacteria 1872
13 Ga0065707_10081967 3300005295 Bacteria 26895
14 Ga0070670_100000572 3300005331 Bacteria 29143
15 Ga0070670_100008918 3300005331 Bacteria 8563
16 Ga0070670_100018040 3300005331 Bacteria 6057
17 Ga0070670_100256745 3300005331 Bacteria 1523
18 Ga0068869_100050211 3300005334 Bacteria 3023
19 Ga0070668_100192662 3300005347 Bacteria 1670
20 Ga0070668_100558328 3300005347 Bacteria 997
21 Ga0070675_100166138 3300005354 Bacteria 1901
22 Ga0070675_100394024 3300005354 Bacteria 1234
23 Ga0070659_100019711 3300005366 Bacteria 5117
24 Ga0070667_100000134 3300005367 Bacteria 94286
25 Ga0070662_100108159 3300005457 Bacteria 2114
26 Ga0070684_100078995 3300005535 Bacteria 2908
27 Ga0068853_100008157 3300005539 Bacteria 8406
28 Ga0068853_100129644 3300005539 Bacteria 2257
29 Ga0068853_100264234 3300005539 Bacteria 1583
30 Ga0070672_100032569 3300005543 Bacteria 3936
31 Ga0070672_100147858 3300005543 Bacteria 1942
32 Ga0070665_100419323 3300005548 Bacteria 1347
33 Ga0068855_100007391 3300005563 Bacteria 13300
34 Ga0068855_100176360 3300005563 Bacteria 2418
35 Ga0068855_100594468 3300005563 Bacteria 1194
36 Ga0068857_100101679 3300005577 Bacteria 2579
37 Ga0068854_100466023 3300005578 Bacteria 1058
38 Ga0070702_100167107 3300005615 Bacteria 1428
39 Ga0068852_100000810 3300005616 Bacteria 20590
40 Ga0068852_100354956 3300005616 Bacteria 1433
41 Ga0068859_100113314 3300005617 Bacteria 2775
42 Ga0068859_100372927 3300005617 Bacteria 1523
43 Ga0068864_100000089 3300005618 Bacteria 97458
44 Ga0068861_100095032 3300005719 Bacteria 2360
45 Ga0068863_100000084 3300005841 Bacteria 104480
46 Ga0068863_100091473 3300005841 Bacteria 2885
47 Ga0068858_100547466 3300005842 Bacteria 1120
48 Ga0068860_100038001 3300005843 Bacteria 4607
49 Ga0068862_100000112 3300005844 Bacteria 97458
50 Ga0075364_10065338 3300006051 Bacteria 2388
51 Ga0075366_10054611 3300006195 Bacteria 2373
52 Ga0097621_100263740 3300006237 Bacteria 1512
53 Ga0068871_100290598 3300006358 Bacteria 1432
54 Ga0075436_100003183 3300006914 Bacteria 11258
55 Ga0097620_100113311 3300006931 Bacteria 2775
56 Ga0097620_100372948 3300006931 Bacteria 1523
57 Ga0105251_10001379 3300009011 Bacteria 21025
58 Ga0105240_10049864 3300009093 Bacteria 5280
59 Ga0105245_10117546 3300009098 Bacteria 2480
60 Ga0105247_10022305 3300009101 Bacteria 3813
61 Ga0105243_10163719 3300009148 Bacteria 1920
62 Ga0105241_10111206 3300009174 Bacteria 2193
63 Ga0105242_10089350 3300009176 Unclassified 2589
64 Ga0105248_10000012 3300009177 Bacteria 333963
65 Ga0105248_10297569 3300009177 Bacteria 1817
66 Ga0105237_10000186 3300009545 Bacteria 87958
67 Ga0105238_10408578 3300009551 Bacteria 1351
68 Ga0105249_10000257 3300009553 Bacteria 57683
69 Ga0105249_10060265 3300009553 Bacteria 3481
70 Ga0105249_10272502 3300009553 Bacteria 1687
71 Ga0157371_10034886 3300013102 Bacteria 3607
72 Ga0157371_10084473 3300013102 Bacteria 2249
73 Ga0157371_10173301 3300013102 Bacteria 1542
74 Ga0157370_10600269 3300013104 Bacteria 1008
75 Ga0157370_10731867 3300013104 Bacteria 902
76 Ga0157378_10072591 3300013297 Bacteria 3092
77 Ga0163162_10183843 3300013306 Bacteria 2217
78 Ga0157372_10077811 3300013307 Bacteria 3747
79 Ga0163163_10161488 3300014325 Bacteria 2286
80 Ga0157380_10000295 3300014326 Bacteria 29994
81 Ga0157380_10000303 3300014326 Bacteria 29608
82 Ga0157380_10278101 3300014326 Bacteria 1530
83 Ga0157379_10025729 3300014968 Bacteria 5231
84 Ga0157376_10088127 3300014969 Bacteria 2680
85 Ga0183363_1010 3300015690 Bacteria 108191
86 Ga0163161_10071320 3300017792 Bacteria 2542
87 Ga0207713_1003906 3300025735 Bacteria 9920
88 Ga0207682_10012515 3300025893 Bacteria 3311
89 Ga0207710_10013425 3300025900 Bacteria 3446
90 Ga0207647_10000292 3300025904 Bacteria 41200
91 Ga0207695_10160726 3300025913 Bacteria 2178
92 Ga0207671_10002493 3300025914 Bacteria 19649
93 Ga0207657_10319876 3300025919 Bacteria 1227
94 Ga0207649_10074079 3300025920 Bacteria 2184
95 Ga0207650_10001203 3300025925 Bacteria 18998
96 Ga0207650_10002766 3300025925 Bacteria 12112
97 Ga0207659_10094468 3300025926 Bacteria 2241
98 Ga0207659_10454765 3300025926 Bacteria 1079
99 Ga0207690_10002825 3300025932 Bacteria 10476
100 Ga0207690_10006652 3300025932 Bacteria 6848
101 Ga0207690_10439435 3300025932 Bacteria 1047
102 Ga0207706_10025370 3300025933 Bacteria 5311
103 Ga0207709_10163548 3300025935 Bacteria 1555
104 Ga0207669_10053483 3300025937 Bacteria 2433
105 Ga0207691_10138972 3300025940 Bacteria 2141
106 Ga0207711_10000004 3300025941 Bacteria 870636
107 Ga0207689_10012869 3300025942 Bacteria 7146
108 Ga0207667_10001287 3300025949 Bacteria 31458
109 Ga0207667_10352799 3300025949 Bacteria 1500
110 Ga0207712_10000324 3300025961 Bacteria 43682
111 Ga0207658_10001712 3300025986 Bacteria 16630
112 Ga0207639_10087563 3300026041 Bacteria 2483
113 Ga0207639_10092232 3300026041 Bacteria 2427
114 Ga0207641_10000010 3300026088 Bacteria 402193
115 Ga0207648_10352707 3300026089 Bacteria 1326
116 Ga0207676_10000051 3300026095 Bacteria 132645
117 Ga0207674_10142624 3300026116 Bacteria 2355
118 Ga0207675_100267548 3300026118 Bacteria 1658
119 Ga0207683_10112017 3300026121 Bacteria 2444
120 Ga0207698_10005584 3300026142 Bacteria 7782
121 Ga0207698_10098266 3300026142 Bacteria 2418
122 Ga0207698_10243045 3300026142 Unclassified 1642
123 Ga0268265_10000026 3300028380 Bacteria 246653
124 Ga0268264_10117306 3300028381 Unclassified 2341
125 Ga0265338_10001999 3300028800 Bacteria 31678
126 Ga0307513_10259818 3300031456 Unclassified 1527
127 Ga0307513_10353532 3300031456 Bacteria 1216
128 Ga0307408_100037622 3300031548 Bacteria 3409
129 Ga0307408_100070694 3300031548 Bacteria 2578
130 Ga0307408_100488015 3300031548 Bacteria 1076
131 Ga0307405_10132236 3300031731 Bacteria 1726
132 Ga0307405_10230304 3300031731 Bacteria 1365
133 Ga0307406_10017224 3300031901 Bacteria 4207
134 Ga0307406_10048471 3300031901 Bacteria 2683
135 Ga0307412_10020705 3300031911 Bacteria 4006
136 Ga0307412_10052154 3300031911 Bacteria 2707
137 Ga0307412_10232114 3300031911 Bacteria 1421
138 Ga0307412_10382852 3300031911 Bacteria 1139
139 Ga0307416_100399046 3300032002 Bacteria 1412
140 Ga0307416_100447013 3300032002 Bacteria 1344
141 Ga0307414_10063250 3300032004 Bacteria 2629
142 Ga0307411_10018522 3300032005 Bacteria 3996
143 Ga0307411_10198040 3300032005 Bacteria 1540
144 Ga0307411_10584203 3300032005 Bacteria 958
145 Ga0307415_100448172 3300032126 Bacteria 1115
146 Ga0373931_0033604 3300035691 Unclassified 2659
147 Ga0373937_0298212 3300036401 Bacteria 1523
148 Ga0316582_0028367 3300036647 Bacteria 3391
149 Ga0316584_0228575 3300036712 Bacteria 1364
150 Ga0395901_0217482 3300038443 Bacteria 1998
151 Ga0400483_140793 3300039062 Bacteria 7585
152 Ga0451802_0897294 3300041460 Bacteria 1100
153 Ga0451577_0000066 3300042876 Bacteria 257650
154 Ga0451577_0057303 3300042876 Bacteria 3474
155 Ga0451577_0069170 3300042876 Bacteria 3148
156 Ga0451577_0093971 3300042876 Bacteria 2678
157 Ga0451577_0240703 3300042876 Unclassified 1637
158 Ga0451577_0278217 3300042876 Bacteria 1516
159 Ga0451577_0453387 3300042876 Bacteria 1165
160 Ga0451577_0663494 3300042876 Unclassified 945
161 Ga0466969_0033122 3300044656 Archaea 2625
162 Ga0453683_0000010 3300044673 Bacteria 470890
163 Ga0453683_0001659 3300044673 Bacteria 18663
164 Ga0453683_0005556 3300044673 Bacteria 8776
165 Ga0453683_0061457 3300044673 Bacteria 2348
166 Ga0453683_0173363 3300044673 Bacteria 1366
167 Ga0466961_0080059 3300044693 Bacteria 2068
168 Ga0453684_0000199 3300044712 Bacteria 264155
169 Ga0453684_0000206 3300044712 Bacteria 257650
170 Ga0453684_0003379 3300044712 Bacteria 36116
171 Ga0453684_0004909 3300044712 Bacteria 27373
172 Ga0453684_0009022 3300044712 Bacteria 17604
173 Ga0453684_0012164 3300044712 Bacteria 14274
174 Ga0453684_0016809 3300044712 Bacteria 11397
175 Ga0453684_0019929 3300044712 Bacteria 10170
176 Ga0453684_0067914 3300044712 Bacteria 4530
177 Ga0453684_0076469 3300044712 Bacteria 4203
178 Ga0453684_0149664 3300044712 Bacteria 2776
179 Ga0453684_0367305 3300044712 Bacteria 1619
180 Ga0453684_0669712 3300044712 Bacteria 1130
181 Ga0466959_0008448 3300045049 Bacteria 7282
182 Ga0451576_0000072 3300045051 Bacteria 257650
183 Ga0451576_0000211 3300045051 Bacteria 146199
184 Ga0451576_0001500 3300045051 Bacteria 39385
185 Ga0451576_0017943 3300045051 Bacteria 7768
186 Ga0495654_0014056 3300046530 Bacteria 4269
187 Ga0495654_0014486 3300046530 Bacteria 4196
188 Ga0495668_0010587 3300046616 Bacteria 5572
189 Ga0495668_0019510 3300046616 Bacteria 3907
190 Ga0495686_0199542 3300047472 Bacteria 1149
191 Ga0496101_0080964 3300048904 Bacteria 2400
192 Ga0496103_0030062 3300048906 Bacteria 3304
193 Ga0496105_0017434 3300048908 Bacteria 5758
194 Ga0496108_0030475 3300048911 Bacteria 4471
195 Ga0496110_0046970 3300048913 Bacteria 3779
196 Ga0496112_0005401 3300048915 Bacteria 11048
197 Ga0496117_0017332 3300048920 Bacteria 6019
198 Ga0496118_0000946 3300048921 Bacteria 45410
199 Ga0496122_0007555 3300048925 Bacteria 12033
200 Ga0495678_096833 3300049459 Bacteria 1029
201 Ga0501290_000101 3300049513 Bacteria 12782
202 Ga0501292_000192 3300049515 Bacteria 9776
203 Ga0501294_000091 3300049517 Bacteria 10019
204 Ga0501300_000531 3300049523 Bacteria 5686
205 Ga0501300_005797 3300049523 Bacteria 1817
206 Ga0501034_0067826 3300049571 Bacteria 3579
207 Ga0501206_003352 3300049653 Bacteria 2036
208 Ga0501223_000018 3300049663 Bacteria 67853
209 Ga0501224_000002 3300049664 Bacteria 229331
210 Ga0501227_024387 3300049665 Bacteria 1411
211 Ga0501233_000035 3300049668 Bacteria 17872
212 Ga0501233_009777 3300049668 Bacteria 1877
213 Ga0501235_014240 3300049669 Bacteria 1753
214 Ga0501259_000599 3300049688 Bacteria 5758
215 Ga0501261_000300 3300049690 Bacteria 6796
216 Ga0501225_0000045 3300049705 Bacteria 41541
217 Ga0501225_0018854 3300049705 Bacteria 1910
218 Ga0501234_003167 3300049707 Bacteria 2589
219 Ga0501271_003424 3300049768 Bacteria 1463
220 Ga0501279_000162 3300049775 Bacteria 9407
221 Ga0501280_000112 3300049776 Bacteria 21155
222 Ga0501283_000953 3300049779 Bacteria 3833
223 Ga0501226_000026 3300049853 Bacteria 91031
224 nmdc:mga08x19_1332_c1 3300050514 Bacteria 15320
225 Ga0500643_003042 3300053087 Bacteria 8276
226 Ga0500583_0013294 3300053092 Bacteria 3179
227 Ga0500592_000002 3300053116 Bacteria 141670
228 Ga0500604_0017018 3300053151 Bacteria 2007
229 Ga0500604_0026458 3300053151 Bacteria 1673
230 Ga0500604_0117642 3300053151 Bacteria 887
231 Ga0500627_0000026 3300053158 Bacteria 100362
232 Ga0500627_0001307 3300053158 Bacteria 6902
233 Ga0466962_0007180 3300061719 Bacteria 5336

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042876 Ga0451577_0278217 Ga0451577_0278217_28_711 214
2 3300044712 Ga0453684_0669712 Ga0453684_0669712_335_1090 224
3 3300048915 Ga0496112_0005401 Ga0496112_0005401_2316_3206 230
4 3300036401 Ga0373937_0298212 Ga0373937_0298212_271_1068 244
5 3300009545 Ga0105237_10000186 Ga0105237_1000018668 245
6 3300025914 Ga0207671_10002493 Ga0207671_100024935 245
7 3300013102 Ga0157371_10173301 Ga0157371_101733013 249
8 3300013104 Ga0157370_10600269 Ga0157370_106002692 249
9 3300013104 Ga0157370_10731867 Ga0157370_107318671 249
10 3300042876 Ga0451577_0240703 Ga0451577_0240703_117_875 249
11 3300044712 Ga0453684_0004909 Ga0453684_0004909_9905_10663 249
12 iso_pu_bacteria 2911138879 2911142579 249
13 3300003322 rootL2_10285299 rootL2_102852992 250
14 3300005331 Ga0070670_100008918 Ga0070670_1000089185 250
15 3300005347 Ga0070668_100192662 Ga0070668_1001926622 250
16 3300005347 Ga0070668_100558328 Ga0070668_1005583281 250
17 3300005354 Ga0070675_100166138 Ga0070675_1001661382 250
18 3300005543 Ga0070672_100032569 Ga0070672_1000325693 250
19 3300005578 Ga0068854_100466023 Ga0068854_1004660231 250
20 3300025893 Ga0207682_10012515 Ga0207682_100125153 250
21 3300025926 Ga0207659_10094468 Ga0207659_100944682 250
22 3300025937 Ga0207669_10053483 Ga0207669_100534831 250
23 3300025940 Ga0207691_10138972 Ga0207691_101389722 250
24 3300035691 Ga0373931_0033604 Ga0373931_0033604_723_1514 250
25 3300042876 Ga0451577_0000066 Ga0451577_0000066_124999_125793 250
26 3300042876 Ga0451577_0057303 Ga0451577_0057303_2509_3342 250
27 3300042876 Ga0451577_0069170 Ga0451577_0069170_549_1343 250
28 3300042876 Ga0451577_0093971 Ga0451577_0093971_17_850 250
29 3300042876 Ga0451577_0453387 Ga0451577_0453387_52_846 250
30 3300042876 Ga0451577_0663494 Ga0451577_0663494_72_866 250
31 3300044656 Ga0466969_0033122 Ga0466969_0033122_566_1384 250
32 3300044673 Ga0453683_0000010 Ga0453683_0000010_174930_175724 250
33 3300044673 Ga0453683_0001659 Ga0453683_0001659_7385_8179 250
34 3300044673 Ga0453683_0005556 Ga0453683_0005556_5486_6280 250
35 3300044673 Ga0453683_0061457 Ga0453683_0061457_936_1730 250
36 3300044673 Ga0453683_0173363 Ga0453683_0173363_92_886 250
37 3300044693 Ga0466961_0080059 Ga0466961_0080059_477_1295 250
38 3300044712 Ga0453684_0000199 Ga0453684_0000199_204892_205686 250
39 3300044712 Ga0453684_0000206 Ga0453684_0000206_131858_132652 250
40 3300044712 Ga0453684_0003379 Ga0453684_0003379_19106_19885 250
41 3300044712 Ga0453684_0009022 Ga0453684_0009022_13869_14702 250
42 3300044712 Ga0453684_0016809 Ga0453684_0016809_10427_11221 250
43 3300044712 Ga0453684_0019929 Ga0453684_0019929_8752_9531 250
44 3300044712 Ga0453684_0067914 Ga0453684_0067914_2534_3328 250
45 3300044712 Ga0453684_0076469 Ga0453684_0076469_73_906 250
46 3300044712 Ga0453684_0149664 Ga0453684_0149664_1697_2476 250
47 3300044712 Ga0453684_0367305 Ga0453684_0367305_531_1310 250
48 3300045049 Ga0466959_0008448 Ga0466959_0008448_5572_6390 250
49 3300045051 Ga0451576_0000072 Ga0451576_0000072_131858_132652 250
50 3300045051 Ga0451576_0000211 Ga0451576_0000211_24597_25376 250
51 3300045051 Ga0451576_0001500 Ga0451576_0001500_23371_24222 250
52 3300045051 Ga0451576_0017943 Ga0451576_0017943_6224_7018 250
53 3300048911 Ga0496108_0030475 Ga0496108_0030475_431_1231 250
54 3300003316 rootH1_10004736 rootH1_1000473617 251
55 3300003320 rootH2_10217181 rootH2_102171813 251
56 3300003322 rootL2_10200705 rootL2_102007057 251
57 3300003323 rootH1_10003785 rootH1_1000378594 251
58 3300003323 rootH1_10100757 rootH1_101007573 251
59 3300003323 rootH1_10178832 rootH1_101788323 251
60 3300006914 Ga0075436_100003183 Ga0075436_10000318310 251
61 3300031456 Ga0307513_10259818 Ga0307513_102598182 251
62 3300032002 Ga0307416_100399046 Ga0307416_1003990462 251
63 3300032005 Ga0307411_10018522 Ga0307411_100185224 251
64 3300049523 Ga0501300_005797 Ga0501300_005797_396_1187 251
65 3300049768 Ga0501271_003424 Ga0501271_003424_639_1430 251
66 3300050514 nmdc:mga08x19_1332_c1 nmdc:mga08x19_1332_c1_5987_6751 251
67 3300005366 Ga0070659_100019711 Ga0070659_1000197112 252
68 3300009098 Ga0105245_10117546 Ga0105245_101175463 252
69 3300014326 Ga0157380_10000295 Ga0157380_1000029520 252
70 3300014969 Ga0157376_10088127 Ga0157376_100881273 252
71 3300025932 Ga0207690_10002825 Ga0207690_100028257 252
72 3300044712 Ga0453684_0012164 Ga0453684_0012164_11030_11800 252
73 3300031548 Ga0307408_100488015 Ga0307408_1004880152 253
74 3300039062 Ga0400483_140793 Ga0400483_140793_248_1102 253
75 3300005290 Ga0065712_10110467 Ga0065712_101104672 255
76 3300005293 Ga0065715_10139722 Ga0065715_101397222 255
77 3300005331 Ga0070670_100018040 Ga0070670_1000180404 255
78 3300005354 Ga0070675_100394024 Ga0070675_1003940241 255
79 3300005535 Ga0070684_100078995 Ga0070684_1000789952 255
80 3300005563 Ga0068855_100594468 Ga0068855_1005944682 255
81 3300005616 Ga0068852_100000810 Ga0068852_10000081012 255
82 3300005841 Ga0068863_100091473 Ga0068863_1000914733 255
83 3300006195 Ga0075366_10054611 Ga0075366_100546113 255
84 3300013102 Ga0157371_10034886 Ga0157371_100348863 255
85 3300013102 Ga0157371_10084473 Ga0157371_100844733 255
86 3300013307 Ga0157372_10077811 Ga0157372_100778114 255
87 3300025904 Ga0207647_10000292 Ga0207647_1000029215 255
88 3300025920 Ga0207649_10074079 Ga0207649_100740793 255
89 3300025925 Ga0207650_10002766 Ga0207650_100027666 255
90 3300025926 Ga0207659_10454765 Ga0207659_104547652 255
91 3300025932 Ga0207690_10006652 Ga0207690_100066525 255
92 3300026121 Ga0207683_10112017 Ga0207683_101120173 255
93 3300026142 Ga0207698_10005584 Ga0207698_100055845 255
94 3300026142 Ga0207698_10243045 Ga0207698_102430453 255
95 3300031456 Ga0307513_10353532 Ga0307513_103535321 255
96 3300032126 Ga0307415_100448172 Ga0307415_1004481722 255
97 3300038443 Ga0395901_0217482 Ga0395901_0217482_1035_1838 255
98 3300041460 Ga0451802_0897294 Ga0451802_0897294_246_1043 255
99 3300053092 Ga0500583_0013294 Ga0500583_0013294_1907_2704 255
100 3300053151 Ga0500604_0117642 Ga0500604_0117642_10_807 255
101 3300061719 Ga0466962_0007180 Ga0466962_0007180_168_962 255
102 3300025919 Ga0207657_10319876 Ga0207657_103198761 256
103 3300031548 Ga0307408_100037622 Ga0307408_1000376223 256
104 3300031731 Ga0307405_10132236 Ga0307405_101322362 256
105 3300031901 Ga0307406_10048471 Ga0307406_100484712 256
106 3300031911 Ga0307412_10232114 Ga0307412_102321141 256
107 3300048925 Ga0496122_0007555 Ga0496122_0007555_1129_1995 256
108 iso_pu_bacteria 8054280661 8054282577 256
109 3300015690 Ga0183363_1010 Ga0183363_10103 257
110 iso_pu_bacteria 2554235469 2556063902 257
111 iso_pu_bacteria 3001892409 3001895890 257
112 3300005539 Ga0068853_100264234 Ga0068853_1002642342 258
113 3300005615 Ga0070702_100167107 Ga0070702_1001671072 258
114 3300005719 Ga0068861_100095032 Ga0068861_1000950322 258
115 3300006237 Ga0097621_100263740 Ga0097621_1002637402 258
116 3300009177 Ga0105248_10297569 Ga0105248_102975691 258
117 3300009553 Ga0105249_10272502 Ga0105249_102725022 258
118 3300014325 Ga0163163_10161488 Ga0163163_101614883 258
119 3300014326 Ga0157380_10278101 Ga0157380_102781012 258
120 3300017792 Ga0163161_10071320 Ga0163161_100713203 258
121 3300025935 Ga0207709_10163548 Ga0207709_101635482 258
122 3300026089 Ga0207648_10352707 Ga0207648_103527071 258
123 3300026118 Ga0207675_100267548 Ga0207675_1002675481 258
124 3300036647 Ga0316582_0028367 Ga0316582_0028367_2385_3320 258
125 3300036712 Ga0316584_0228575 Ga0316584_0228575_67_1002 258
126 3300048913 Ga0496110_0046970 Ga0496110_0046970_2874_3734 258
127 iso_pu_bacteria 2984527788 2984531479 258
128 iso_pu_bacteria 2984532647 2984532733 258
129 3300028800 Ga0265338_10001999 Ga0265338_1000199928 259
130 iso_pu_bacteria 2830075706 2830075882 259
131 3300005331 Ga0070670_100256745 Ga0070670_1002567452 260
132 3300005334 Ga0068869_100050211 Ga0068869_1000502114 260
133 3300005539 Ga0068853_100129644 Ga0068853_1001296442 260
134 3300005543 Ga0070672_100147858 Ga0070672_1001478582 260
135 3300005563 Ga0068855_100007391 Ga0068855_1000073917 260
136 3300005617 Ga0068859_100372927 Ga0068859_1003729271 260
137 3300005842 Ga0068858_100547466 Ga0068858_1005474662 260
138 3300005843 Ga0068860_100038001 Ga0068860_1000380013 260
139 3300006358 Ga0068871_100290598 Ga0068871_1002905981 260
140 3300006931 Ga0097620_100372948 Ga0097620_1003729481 260
141 3300009093 Ga0105240_10049864 Ga0105240_100498642 260
142 3300009148 Ga0105243_10163719 Ga0105243_101637192 260
143 3300009174 Ga0105241_10111206 Ga0105241_101112062 260
144 3300009176 Ga0105242_10089350 Ga0105242_100893503 260
145 3300009553 Ga0105249_10060265 Ga0105249_100602652 260
146 3300025913 Ga0207695_10160726 Ga0207695_101607261 260
147 3300025932 Ga0207690_10439435 Ga0207690_104394351 260
148 3300025942 Ga0207689_10012869 Ga0207689_100128694 260
149 3300025949 Ga0207667_10001287 Ga0207667_1000128728 260
150 3300026041 Ga0207639_10087563 Ga0207639_100875632 260
151 3300028381 Ga0268264_10117306 Ga0268264_101173063 260
152 iso_pu_bacteria 2711768088 2712198700 261
153 iso_pu_bacteria 8054795415 8054803970 261
154 3300005548 Ga0070665_100419323 Ga0070665_1004193232 263
155 3300006051 Ga0075364_10065338 Ga0075364_100653382 263
156 3300048904 Ga0496101_0080964 Ga0496101_0080964_822_1718 263
157 3300048908 Ga0496105_0017434 Ga0496105_0017434_2832_3728 263
158 iso_pu_bacteria 8007371054 8007375395 263
159 iso_pu_bacteria 8007375930 8007377741 263
160 2162886006 SwRhRL3b_contig_2974371 SwRhRL3b_0522.00001560 265
161 3300001976 JGI24752J21851_1000925 JGI24752J21851_10009254 265
162 3300005289 Ga0065704_10077651 Ga0065704_100776514 265
163 3300005295 Ga0065707_10081967 Ga0065707_100819674 265
164 3300005331 Ga0070670_100000572 Ga0070670_10000057222 265
165 3300005367 Ga0070667_100000134 Ga0070667_1000001342 265
166 3300005457 Ga0070662_100108159 Ga0070662_1001081593 265
167 3300005539 Ga0068853_100008157 Ga0068853_1000081575 265
168 3300005563 Ga0068855_100176360 Ga0068855_1001763603 265
169 3300005577 Ga0068857_100101679 Ga0068857_1001016792 265
170 3300005616 Ga0068852_100354956 Ga0068852_1003549562 265
171 3300005617 Ga0068859_100113314 Ga0068859_1001133142 265
172 3300005618 Ga0068864_100000089 Ga0068864_10000008993 265
173 3300005841 Ga0068863_100000084 Ga0068863_10000008493 265
174 3300005844 Ga0068862_100000112 Ga0068862_1000001127 265
175 3300006931 Ga0097620_100113311 Ga0097620_1001133112 265
176 3300009011 Ga0105251_10001379 Ga0105251_1000137913 265
177 3300009101 Ga0105247_10022305 Ga0105247_100223052 265
178 3300009177 Ga0105248_10000012 Ga0105248_10000012241 265
179 3300009551 Ga0105238_10408578 Ga0105238_104085782 265
180 3300009553 Ga0105249_10000257 Ga0105249_100002577 265
181 3300013297 Ga0157378_10072591 Ga0157378_100725912 265
182 3300013306 Ga0163162_10183843 Ga0163162_101838433 265
183 3300014326 Ga0157380_10000303 Ga0157380_1000030316 265
184 3300014968 Ga0157379_10025729 Ga0157379_100257292 265
185 3300025735 Ga0207713_1003906 Ga0207713_10039064 265
186 3300025900 Ga0207710_10013425 Ga0207710_100134252 265
187 3300025925 Ga0207650_10001203 Ga0207650_1000120313 265
188 3300025933 Ga0207706_10025370 Ga0207706_100253703 265
189 3300025941 Ga0207711_10000004 Ga0207711_10000004749 265
190 3300025949 Ga0207667_10352799 Ga0207667_103527992 265
191 3300025961 Ga0207712_10000324 Ga0207712_100003247 265
192 3300025986 Ga0207658_10001712 Ga0207658_1000171215 265
193 3300026041 Ga0207639_10092232 Ga0207639_100922322 265
194 3300026088 Ga0207641_10000010 Ga0207641_10000010394 265
195 3300026095 Ga0207676_10000051 Ga0207676_100000517 265
196 3300026116 Ga0207674_10142624 Ga0207674_101426242 265
197 3300026142 Ga0207698_10098266 Ga0207698_100982662 265
198 3300028380 Ga0268265_10000026 Ga0268265_100000267 265
199 3300031548 Ga0307408_100070694 Ga0307408_1000706942 265
200 3300031731 Ga0307405_10230304 Ga0307405_102303042 265
201 3300031901 Ga0307406_10017224 Ga0307406_100172243 265
202 3300031911 Ga0307412_10020705 Ga0307412_100207054 265
203 3300031911 Ga0307412_10052154 Ga0307412_100521543 265
204 3300031911 Ga0307412_10382852 Ga0307412_103828522 265
205 3300032002 Ga0307416_100447013 Ga0307416_1004470131 265
206 3300032004 Ga0307414_10063250 Ga0307414_100632502 265
207 3300032005 Ga0307411_10198040 Ga0307411_101980401 265
208 3300032005 Ga0307411_10584203 Ga0307411_105842031 265
209 3300046530 Ga0495654_0014056 Ga0495654_0014056_3397_4194 265
210 3300046530 Ga0495654_0014486 Ga0495654_0014486_2816_3619 265
211 3300046616 Ga0495668_0010587 Ga0495668_0010587_984_1781 265
212 3300046616 Ga0495668_0019510 Ga0495668_0019510_2610_3407 265
213 3300047472 Ga0495686_0199542 Ga0495686_0199542_19_822 265
214 3300048906 Ga0496103_0030062 Ga0496103_0030062_1999_2835 265
215 3300048920 Ga0496117_0017332 Ga0496117_0017332_1556_2392 265
216 3300048921 Ga0496118_0000946 Ga0496118_0000946_11347_12183 265
217 3300049459 Ga0495678_096833 Ga0495678_096833_205_1002 265
218 3300049513 Ga0501290_000101 Ga0501290_000101_1027_1827 265
219 3300049515 Ga0501292_000192 Ga0501292_000192_4105_4905 265
220 3300049517 Ga0501294_000091 Ga0501294_000091_4178_4978 265
221 3300049523 Ga0501300_000531 Ga0501300_000531_1311_2111 265
222 3300049571 Ga0501034_0067826 Ga0501034_0067826_2200_3003 265
223 3300049653 Ga0501206_003352 Ga0501206_003352_559_1359 265
224 3300049663 Ga0501223_000018 Ga0501223_000018_4792_5595 265
225 3300049664 Ga0501224_000002 Ga0501224_000002_111964_112767 265
226 3300049665 Ga0501227_024387 Ga0501227_024387_532_1332 265
227 3300049668 Ga0501233_000035 Ga0501233_000035_3602_4405 265
228 3300049668 Ga0501233_009777 Ga0501233_009777_520_1320 265
229 3300049669 Ga0501235_014240 Ga0501235_014240_727_1530 265
230 3300049688 Ga0501259_000599 Ga0501259_000599_873_1673 265
231 3300049690 Ga0501261_000300 Ga0501261_000300_1101_1901 265
232 3300049705 Ga0501225_0000045 Ga0501225_0000045_33949_34752 265
233 3300049705 Ga0501225_0018854 Ga0501225_0018854_80_880 265
234 3300049707 Ga0501234_003167 Ga0501234_003167_1175_1978 265
235 3300049775 Ga0501279_000162 Ga0501279_000162_4185_4985 265
236 3300049776 Ga0501280_000112 Ga0501280_000112_15650_16450 265
237 3300049779 Ga0501283_000953 Ga0501283_000953_850_1650 265
238 3300049853 Ga0501226_000026 Ga0501226_000026_69383_70186 265
239 3300053087 Ga0500643_003042 Ga0500643_003042_5062_5859 265
240 3300053116 Ga0500592_000002 Ga0500592_000002_138707_139510 265
241 3300053151 Ga0500604_0017018 Ga0500604_0017018_876_1673 265
242 3300053151 Ga0500604_0026458 Ga0500604_0026458_362_1159 265
243 3300053158 Ga0500627_0000026 Ga0500627_0000026_2127_2930 265
244 3300053158 Ga0500627_0001307 Ga0500627_0001307_1081_1878 265

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02673

BacA

Bacitracin resistance protein BacA

41

302

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fmt-assembly1.cif.gz_A imisx-ep of hg-baca soaking sad 0.9198 1 260
6fmt-assembly1.cif.gz_A imisx-ep of hg-baca soaking sad 0.906 1 260
6cb2-assembly1.cif.gz_A crystal structure of escherichia coli uppp 0.8705 1 260
6cb2-assembly1.cif.gz_A crystal structure of escherichia coli uppp 0.8516 1 260
7paf-assembly1.cif.gz_D streptococcus pneumoniae choline importer licb in lipid nanodiscs 0.4649 8 263
ID Description Score Start End Superfamily
af_Q9SD00_473_714_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4612 3 262 1.20.1250.20
af_P9WJW7_210_393_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4255 1 258 1.20.1250.20
af_P9WJX9_220_402_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4094 40 258 1.20.1250.20
af_Q20734_279_525_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4066 55 261 1.20.1250.20
af_P9WJW7_210_393_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4058 1 258 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A1T5BVT7-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.9823 3 265 GO:0005886
GO:0008360
GO:0009252
GO:0046677
GO:0050380
GO:0071555
AF-A0A285LYS3-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.9805 3 264 GO:0005886
GO:0008360
GO:0009252
GO:0046677
GO:0050380
GO:0071555
AF-A0A4Q3CIA2-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.98 57 265 GO:0005886
GO:0046677
GO:0050380
AF-A0A4Q3CIA2-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.9754 57 265 GO:0005886
GO:0046677
GO:0050380
AF-A0A522WM97-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.9746 38 265 GO:0005886
GO:0046677
GO:0050380

Feature Viewer

pLDDT pTM Quality
90.81 0.89 High
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Predicted Structure (AlphaFold2)

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