F349343

General Info

Members Datasets Scaffolds Average Seq Length
236 164 231 309

Family's Representative Sequence

Representative Sequence 3300046457|Ga0495590_0020581|Ga0495590_0020581_40_1113
Length 357
Sequence MSFLSQPHFHNEEAAYAYVEGKLWPEGPVCPHCGGCERIGKLAGASTRIGTYKCYQCRKPFTVKVGTIFESSHVPMRYWLQAIWLVCSSKKGFSANQLQRVLGVTLKTAWFMGHRIREAMQAANLPLFGGDGGAVEVDETFLGVEPGAPVKRSFHHKMKVVSVMDRTTKTVVSTVVDDVNTGTIERVLEERVSRNAHLMSDEGNAYRILGPRYAAHGVVHHGRKEYVNRDNPFVHTETVEGFYSIFKRGMRGVYQHCQKIHLQRYCNEFDFRYNHRTAKGIDDTQRSDALLLGVVGRRLTYRAMVEGSCRSTHSTTQTKADGSSTRHRSRWKTKPSRWKRVEPSSKPPSSTATSGQP

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
4 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
5 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
6 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
7 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
8 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
9 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
14 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013874 Rhizosphere microbial communities from switchgrass harvested rhizosphere in Austin, TX, USA - RS_213 Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
64 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
65 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
66 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
90 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
91 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
92 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
95 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
96 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
97 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
98 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
99 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
108 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
109 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
110 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
111 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
115 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
118 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
119 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
120 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
123 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
124 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
125 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
126 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
127 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
128 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
132 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
133 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
138 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
139 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
140 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
141 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
144 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
145 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
149 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
150 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
154 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
155 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
156 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
157 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
158 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
159 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
160 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
161 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
162 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
163 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.46
Metatranscriptomes 0.42
Isolates 2.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.41
Nodule 1.69
Rhizoplane 2.97
Rhizosphere 75.42
Stem 0
Stem Tuber 0
Unclassified 5.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_4248352 2162886006 Bacteria 2383
2 SwRhRL2b_contig_1302914 2162886007 Bacteria 2271
3 JGI24736J21556_1002733 3300001904 Viruses 3087
4 JGI24739J22299_10000005 3300001989 Bacteria 75837
5 Ga0055530_10000043 3300003791 Bacteria 111112
6 Ga0055530_10001206 3300003791 Bacteria 20000
7 Ga0055531_10000008 3300003794 Bacteria 222269
8 Ga0055531_10005526 3300003794 Bacteria 7381
9 Ga0065165_1011134 3300005262 Bacteria 3794
10 Ga0065704_10096014 3300005289 Bacteria 2448
11 Ga0065704_10130260 3300005289 Bacteria 1638
12 Ga0065707_10082561 3300005295 Bacteria 13721
13 Ga0070658_10000002 3300005327 Bacteria 637290
14 Ga0070658_10000542 3300005327 Bacteria 32750
15 Ga0070658_10029874 3300005327 Bacteria 4378
16 Ga0070658_10041496 3300005327 Bacteria 3712
17 Ga0070658_10108621 3300005327 Bacteria 2296
18 Ga0070658_10132898 3300005327 Bacteria 2074
19 Ga0070666_10040280 3300005335 Bacteria 3118
20 Ga0070680_100060619 3300005336 Unclassified 3096
21 Ga0070660_100000793 3300005339 Bacteria 20982
22 Ga0070660_100001590 3300005339 Bacteria 15625
23 Ga0070674_100468444 3300005356 Bacteria 1043
24 Ga0070659_100000005 3300005366 Bacteria 259902
25 Ga0070659_100044635 3300005366 Bacteria 3471
26 Ga0070681_10002745 3300005458 Bacteria 16228
27 Ga0070681_10116809 3300005458 Bacteria 2604
28 Ga0068853_100052646 3300005539 Bacteria 3506
29 Ga0070665_100001962 3300005548 Bacteria 23145
30 Ga0070665_100099641 3300005548 Bacteria 2910
31 Ga0068855_100067331 3300005563 Bacteria 4173
32 Ga0068855_100265350 3300005563 Bacteria 1911
33 Ga0068857_100127896 3300005577 Bacteria 2290
34 Ga0068856_100492242 3300005614 Bacteria 1247
35 Ga0068852_100568272 3300005616 Bacteria 1136
36 Ga0068859_100073832 3300005617 Bacteria 3449
37 Ga0068864_100020490 3300005618 Bacteria 5532
38 Ga0068863_100000237 3300005841 Bacteria 58657
39 Ga0068858_100000149 3300005842 Bacteria 73242
40 Ga0068858_100053972 3300005842 Bacteria 3717
41 Ga0068862_100003605 3300005844 Bacteria 13256
42 Ga0068862_100005749 3300005844 Bacteria 10343
43 Ga0070717_10014109 3300006028 Bacteria 6141
44 Ga0075365_10043277 3300006038 Bacteria 2948
45 Ga0075363_100028166 3300006048 Bacteria 2887
46 Ga0075364_10039509 3300006051 Bacteria 3059
47 Ga0070712_100003103 3300006175 Bacteria 10247
48 Ga0075369_10002444 3300006186 Bacteria 6625
49 Ga0097621_100300174 3300006237 Bacteria 1418
50 Ga0075370_10153451 3300006353 Bacteria 1350
51 Ga0075428_100600815 3300006844 Bacteria 1175
52 Ga0075431_100000345 3300006847 Bacteria 36593
53 Ga0075436_100052725 3300006914 Bacteria 2808
54 Ga0097620_100073831 3300006931 Bacteria 3449
55 Ga0105250_10007959 3300009092 Bacteria 4526
56 Ga0105240_10009829 3300009093 Bacteria 13504
57 Ga0105240_10026353 3300009093 Bacteria 7626
58 Ga0105240_10130408 3300009093 Unclassified 3016
59 Ga0105240_10139661 3300009093 Bacteria 2898
60 Ga0105240_10239097 3300009093 Bacteria 2106
61 Ga0105245_10098356 3300009098 Bacteria 2704
62 Ga0105242_10012437 3300009176 Bacteria 6552
63 Ga0105248_10122381 3300009177 Bacteria 2935
64 Ga0105248_10468206 3300009177 Bacteria 1421
65 Ga0105238_10013660 3300009551 Bacteria 8200
66 Ga0105238_10325298 3300009551 Bacteria 1524
67 Ga0105249_10000106 3300009553 Bacteria 115526
68 Ga0105249_10055183 3300009553 Bacteria 3634
69 Ga0105030_101777 3300009987 Bacteria 1904
70 Ga0157371_10063290 3300013102 Unclassified 2622
71 Ga0157369_10194960 3300013105 Bacteria 2128
72 Ga0157374_10122567 3300013296 Bacteria 2510
73 Ga0157378_10138571 3300013297 Unclassified 2258
74 Ga0163162_10025445 3300013306 Bacteria 5848
75 Ga0157372_10018360 3300013307 Bacteria 7518
76 Ga0157372_10145435 3300013307 Bacteria 2733
77 Ga0157372_10424860 3300013307 Bacteria 1549
78 Ga0157514_106483 3300013874 Bacteria 1324
79 Ga0157379_10033316 3300014968 Bacteria 4595
80 Ga0157379_10056270 3300014968 Bacteria 3515
81 Ga0157379_10066324 3300014968 Bacteria 3226
82 Ga0157376_10248299 3300014969 Unclassified 1661
83 Ga0163161_10058560 3300017792 Bacteria 2800
84 Ga0213872_10012475 3300021361 Bacteria 3997
85 Ga0213875_10003794 3300021388 Bacteria 8496
86 Ga0209026_1009061 3300025250 Bacteria 1999
87 Ga0209026_1018219 3300025250 Bacteria 1113
88 Ga0209050_1000026 3300025298 Bacteria 499134
89 Ga0209050_1000073 3300025298 Bacteria 292046
90 Ga0209257_1000009 3300025304 Bacteria 1205047
91 Ga0209257_1000099 3300025304 Bacteria 255304
92 Ga0209257_1016575 3300025304 Bacteria 2970
93 Ga0207680_10012402 3300025903 Bacteria 4339
94 Ga0207647_10000295 3300025904 Bacteria 40933
95 Ga0207705_10000520 3300025909 Bacteria 32771
96 Ga0207705_10009861 3300025909 Bacteria 6954
97 Ga0207705_10028802 3300025909 Bacteria 3958
98 Ga0207705_10082571 3300025909 Bacteria 2344
99 Ga0207705_10143108 3300025909 Bacteria 1787
100 Ga0207705_10262983 3300025909 Bacteria 1318
101 Ga0207705_10313752 3300025909 Bacteria 1204
102 Ga0207707_10260139 3300025912 Bacteria 1506
103 Ga0207695_10021448 3300025913 Bacteria 7368
104 Ga0207695_10036223 3300025913 Bacteria 5336
105 Ga0207695_10049103 3300025913 Bacteria 4451
106 Ga0207693_10005936 3300025915 Bacteria 10132
107 Ga0207660_10076612 3300025917 Unclassified 2446
108 Ga0207657_10000259 3300025919 Bacteria 56194
109 Ga0207657_10000695 3300025919 Bacteria 35770
110 Ga0207657_10294560 3300025919 Bacteria 1286
111 Ga0207694_10017055 3300025924 Bacteria 5485
112 Ga0207687_10116256 3300025927 Bacteria 1993
113 Ga0207690_10000002 3300025932 Bacteria 807473
114 Ga0207690_10000033 3300025932 Bacteria 149705
115 Ga0207690_10086509 3300025932 Bacteria 2203
116 Ga0207711_10081207 3300025941 Bacteria 2833
117 Ga0207712_10000593 3300025961 Bacteria 28979
118 Ga0207703_10000050 3300026035 Bacteria 145849
119 Ga0207703_10014536 3300026035 Bacteria 6141
120 Ga0207641_10000007 3300026088 Bacteria 441443
121 Ga0207676_10016091 3300026095 Bacteria 5409
122 Ga0268266_10001055 3300028379 Bacteria 34552
123 Ga0268266_10082271 3300028379 Bacteria 2808
124 Ga0268265_10000867 3300028380 Bacteria 28355
125 Ga0268265_10005646 3300028380 Bacteria 8548
126 Ga0265334_10000087 3300028573 Bacteria 66703
127 Ga0265338_10062190 3300028800 Bacteria 3265
128 Ga0265760_10004416 3300031090 Viruses 4042
129 Ga0265330_10083250 3300031235 Bacteria 1377
130 Ga0265325_10003965 3300031241 Bacteria 9473
131 Ga0265340_10033373 3300031247 Unclassified 2563
132 Ga0265331_10074111 3300031250 Bacteria 1589
133 Ga0265316_10089328 3300031344 Bacteria 2352
134 Ga0307513_10019936 3300031456 Bacteria 7966
135 Ga0307513_10167688 3300031456 Bacteria 2078
136 Ga0307513_10227982 3300031456 Bacteria 1678
137 Ga0265314_10000160 3300031711 Bacteria 102289
138 Ga0307516_10028493 3300031730 Bacteria 5650
139 Ga0373945_0054595 3300035116 Bacteria 1477
140 Ga0373933_0165299 3300035724 Bacteria 1406
141 Ga0373947_0271502 3300035725 Bacteria 1126
142 Ga0373937_0026455 3300036401 Bacteria 5244
143 Ga0373937_0084854 3300036401 Bacteria 2930
144 Ga0395899_0022861 3300037312 Bacteria 4737
145 Ga0395899_0049178 3300037312 Bacteria 3135
146 Ga0395900_0016676 3300037418 Bacteria 7492
147 Ga0395900_0049660 3300037418 Bacteria 4322
148 Ga0395900_0143239 3300037418 Bacteria 2446
149 Ga0395900_0237991 3300037418 Bacteria 1827
150 Ga0395898_0114243 3300037466 Bacteria 2587
151 Ga0395898_0240789 3300037466 Bacteria 1725
152 Ga0395905_0231841 3300037471 Bacteria 1726
153 Ga0395905_0292914 3300037471 Bacteria 1514
154 Ga0395905_0307119 3300037471 Bacteria 1474
155 Ga0436364_0049233 3300037853 Bacteria 32067
156 Ga0395901_0058991 3300038443 Bacteria 3992
157 Ga0395901_0133720 3300038443 Bacteria 2606
158 Ga0395901_0148351 3300038443 Bacteria 2465
159 Ga0395901_0287618 3300038443 Bacteria 1706
160 Ga0395901_0330370 3300038443 Bacteria 1576
161 Ga0395901_0501932 3300038443 Bacteria 1235
162 Ga0395901_0719780 3300038443 Bacteria 994
163 Ga0436361_0018122 3300039447 Bacteria 6228
164 Ga0436361_0466363 3300039447 Bacteria 4596
165 Ga0436361_0486150 3300039447 Bacteria 1878
166 Ga0439431_0007311 3300041997 Bacteria 2461
167 Ga0439445_0011943 3300042004 Bacteria 2078
168 Ga0439432_000224 3300042006 Bacteria 20425
169 Ga0453683_0001668 3300044673 Bacteria 18578
170 Ga0453683_0039433 3300044673 Bacteria 2968
171 Ga0453684_0065647 3300044712 Bacteria 4627
172 Ga0451576_0010706 3300045051 Bacteria 10501
173 Ga0495590_0020581 3300046457 Bacteria 2343
174 Ga0495616_0000032 3300046513 Bacteria 130692
175 Ga0495630_0027517 3300046517 Bacteria 4219
176 Ga0495648_0002184 3300046524 Bacteria 18345
177 Ga0495625_0004742 3300046660 Bacteria 12724
178 Ga0495625_0005582 3300046660 Bacteria 11410
179 Ga0495625_0041293 3300046660 Bacteria 3358
180 Ga0495669_0023948 3300046684 Bacteria 2660
181 Ga0495672_0058618 3300047320 Bacteria 2231
182 Ga0496100_0077239 3300048903 Bacteria 2238
183 Ga0496103_0014058 3300048906 Bacteria 4753
184 Ga0496105_0023341 3300048908 Bacteria 5014
185 Ga0496106_0009635 3300048909 Bacteria 7133
186 Ga0496107_0004120 3300048910 Bacteria 9799
187 Ga0496110_0002431 3300048913 Bacteria 13955
188 Ga0496111_0089660 3300048914 Bacteria 2252
189 Ga0496121_0001910 3300048924 Bacteria 33357
190 Ga0496122_0000970 3300048925 Bacteria 51487
191 Ga0496123_0000286 3300048926 Bacteria 98752
192 Ga0496126_0029254 3300048929 Bacteria 5235
193 Ga0501294_003799 3300049517 Bacteria 1423
194 Ga0501300_001109 3300049523 Bacteria 4074
195 Ga0501034_0001055 3300049571 Bacteria 39121
196 Ga0501047_0261996 3300049581 Bacteria 1576
197 Ga0501073_0089712 3300049589 Bacteria 2137
198 Ga0501206_000001 3300049653 Bacteria 45041
199 Ga0501222_001645 3300049662 Bacteria 3106
200 Ga0501223_004068 3300049663 Bacteria 3150
201 Ga0501235_008415 3300049669 Bacteria 2251
202 Ga0501225_0004623 3300049705 Bacteria 4094
203 Ga0501080_0218802 3300049742 Bacteria 1743
204 Ga0501280_003588 3300049776 Bacteria 2364
205 Ga0501281_00440 3300049777 Bacteria 4073
206 Ga0501282_001129 3300049778 Bacteria 2991
207 Ga0501035_0342488 3300049822 Bacteria 1252
208 Ga0501044_0000979 3300049823 Bacteria 34342
209 Ga0501044_0386597 3300049823 Bacteria 1314
210 nmdc:mga03n38_20616_c1 3300050490 Bacteria 2641
211 nmdc:mga00v17_4130_c1 3300050491 Bacteria 7516
212 nmdc:mga0yw44_342690_c1 3300050492 Bacteria 1005
213 nmdc:mga0yw44_34460_c1 3300050492 Bacteria 2967
214 nmdc:mga06r32_14663_c1 3300050510 Bacteria 7113
215 nmdc:mga08x19_6_c1 3300050514 Bacteria 405679
216 nmdc:mga0sz30_1541_c1 3300050516 Bacteria 8211
217 nmdc:mga0sz30_330_c1 3300050516 Bacteria 18114
218 Ga0500643_000999 3300053087 Bacteria 17326
219 Ga0500651_0002483 3300053093 Bacteria 9763
220 Ga0500562_001168 3300053108 Bacteria 6473
221 Ga0500595_003763 3300053119 Bacteria 6989
222 Ga0500595_012269 3300053119 Bacteria 3320
223 Ga0500607_000070 3300053121 Bacteria 73162
224 Ga0500559_0000777 3300053136 Bacteria 20905
225 Ga0500559_0074961 3300053136 Bacteria 1530
226 Ga0500616_0002221 3300053153 Bacteria 16601
227 Ga0500622_0008508 3300053156 Bacteria 5733
228 Ga0500637_0000184 3300053178 Bacteria 23170
229 Ga0500637_0001862 3300053178 Bacteria 9159
230 Ga0500587_000867 3300053739 Bacteria 4007
231 Ga0501082_0000193 3300060353 Bacteria 52651

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300013296 Ga0157374_10122567 Ga0157374_101225675 247
2 3300025919 Ga0207657_10294560 Ga0207657_102945602 248
3 3300003791 Ga0055530_10001206 Ga0055530_1000120616 282
4 3300003794 Ga0055531_10005526 Ga0055531_100055266 282
5 3300025298 Ga0209050_1000073 Ga0209050_1000073214 282
6 3300025304 Ga0209257_1000099 Ga0209257_100009981 282
7 3300035116 Ga0373945_0054595 Ga0373945_0054595_383_1270 285
8 3300038443 Ga0395901_0719780 Ga0395901_0719780_52_969 285
9 3300044712 Ga0453684_0065647 Ga0453684_0065647_1171_2124 286
10 3300005617 Ga0068859_100073832 Ga0068859_1000738323 287
11 3300006931 Ga0097620_100073831 Ga0097620_1000738312 287
12 3300009551 Ga0105238_10013660 Ga0105238_100136605 287
13 3300025924 Ga0207694_10017055 Ga0207694_100170554 287
14 3300005327 Ga0070658_10041496 Ga0070658_100414963 290
15 3300005458 Ga0070681_10116809 Ga0070681_101168092 290
16 3300005563 Ga0068855_100067331 Ga0068855_1000673313 290
17 3300005577 Ga0068857_100127896 Ga0068857_1001278963 290
18 3300025909 Ga0207705_10009861 Ga0207705_100098617 290
19 3300025912 Ga0207707_10260139 Ga0207707_102601391 290
20 3300053119 Ga0500595_012269 Ga0500595_012269_601_1530 290
21 3300013297 Ga0157378_10138571 Ga0157378_101385712 291
22 3300014969 Ga0157376_10248299 Ga0157376_102482992 291
23 3300053156 Ga0500622_0008508 Ga0500622_0008508_1135_2058 292
24 3300009093 Ga0105240_10026353 Ga0105240_100263534 294
25 3300025913 Ga0207695_10021448 Ga0207695_100214487 294
26 3300031090 Ga0265760_10004416 Ga0265760_100044162 294
27 3300049823 Ga0501044_0000979 Ga0501044_0000979_9997_10911 294
28 3300049823 Ga0501044_0386597 Ga0501044_0386597_19_969 295
29 3300053178 Ga0500637_0001862 Ga0500637_0001862_2337_3260 295
30 3300006844 Ga0075428_100600815 Ga0075428_1006008152 296
31 3300060353 Ga0501082_0000193 Ga0501082_0000193_7831_8736 296
32 iso_pu_bacteria 2524023228 2524536880 296
33 3300028800 Ga0265338_10062190 Ga0265338_100621906 297
34 3300031241 Ga0265325_10003965 Ga0265325_100039657 297
35 3300031344 Ga0265316_10089328 Ga0265316_100893284 297
36 3300039447 Ga0436361_0018122 Ga0436361_0018122_211_1140 297
37 3300048914 Ga0496111_0089660 Ga0496111_0089660_554_1492 297
38 3300049589 Ga0501073_0089712 Ga0501073_0089712_181_1116 297
39 3300053093 Ga0500651_0002483 Ga0500651_0002483_4992_5957 297
40 3300001904 JGI24736J21556_1002733 JGI24736J21556_10027332 298
41 3300005327 Ga0070658_10000002 Ga0070658_10000002382 298
42 3300025904 Ga0207647_10000295 Ga0207647_1000029553 298
43 3300031247 Ga0265340_10033373 Ga0265340_100333732 298
44 3300031456 Ga0307513_10167688 Ga0307513_101676882 298
45 3300031730 Ga0307516_10028493 Ga0307516_100284933 298
46 iso_pu_bacteria 2874628541 2874634791 298
47 3300005539 Ga0068853_100052646 Ga0068853_1000526461 299
48 3300005842 Ga0068858_100053972 Ga0068858_1000539723 299
49 3300014968 Ga0157379_10066324 Ga0157379_100663243 299
50 3300021361 Ga0213872_10012475 Ga0213872_100124755 299
51 3300026035 Ga0207703_10014536 Ga0207703_100145365 299
52 3300031235 Ga0265330_10083250 Ga0265330_100832502 299
53 3300031711 Ga0265314_10000160 Ga0265314_1000016072 299
54 3300038443 Ga0395901_0058991 Ga0395901_0058991_2773_3717 299
55 3300041997 Ga0439431_0007311 Ga0439431_0007311_846_1766 299
56 3300046457 Ga0495590_0020581 Ga0495590_0020581_40_1113 299
57 3300048913 Ga0496110_0002431 Ga0496110_0002431_591_1535 299
58 3300049571 Ga0501034_0001055 Ga0501034_0001055_37065_37973 299
59 3300050516 nmdc:mga0sz30_1541_c1 nmdc:mga0sz30_1541_c1_3666_4580 299
60 3300053108 Ga0500562_001168 Ga0500562_001168_2014_3087 299
61 iso_pu_bacteria 2503198000 2503201998 299
62 iso_pu_bacteria 2508501114 2509079169 299
63 iso_pu_bacteria 2545555834 2545672166 299
64 3300005548 Ga0070665_100099641 Ga0070665_1000996412 300
65 3300006028 Ga0070717_10014109 Ga0070717_100141098 300
66 3300009093 Ga0105240_10009829 Ga0105240_1000982920 300
67 3300025913 Ga0207695_10036223 Ga0207695_100362232 300
68 3300028379 Ga0268266_10082271 Ga0268266_100822715 300
69 3300044673 Ga0453683_0039433 Ga0453683_0039433_1820_2746 300
70 3300046660 Ga0495625_0005582 Ga0495625_0005582_8676_9593 300
71 3300053153 Ga0500616_0002221 Ga0500616_0002221_8214_9137 300
72 3300005458 Ga0070681_10002745 Ga0070681_100027458 301
73 3300009093 Ga0105240_10130408 Ga0105240_101304085 301
74 3300009176 Ga0105242_10012437 Ga0105242_100124375 301
75 3300013102 Ga0157371_10063290 Ga0157371_100632902 301
76 3300013307 Ga0157372_10145435 Ga0157372_101454353 301
77 3300013307 Ga0157372_10424860 Ga0157372_104248603 301
78 3300035724 Ga0373933_0165299 Ga0373933_0165299_265_1203 301
79 3300036401 Ga0373937_0026455 Ga0373937_0026455_4058_4996 301
80 3300036401 Ga0373937_0084854 Ga0373937_0084854_1463_2404 301
81 3300037312 Ga0395899_0022861 Ga0395899_0022861_1193_2113 301
82 3300037312 Ga0395899_0049178 Ga0395899_0049178_931_1854 301
83 3300037418 Ga0395900_0049660 Ga0395900_0049660_1491_2411 301
84 3300037466 Ga0395898_0114243 Ga0395898_0114243_1499_2422 301
85 3300038443 Ga0395901_0133720 Ga0395901_0133720_1478_2398 301
86 3300039447 Ga0436361_0466363 Ga0436361_0466363_1667_2587 301
87 3300044673 Ga0453683_0001668 Ga0453683_0001668_1391_2323 301
88 3300046684 Ga0495669_0023948 Ga0495669_0023948_1050_1976 301
89 3300049653 Ga0501206_000001 Ga0501206_000001_11658_12584 301
90 3300005262 Ga0065165_1011134 Ga0065165_10111346 302
91 3300009098 Ga0105245_10098356 Ga0105245_100983562 302
92 3300017792 Ga0163161_10058560 Ga0163161_100585603 302
93 3300025909 Ga0207705_10313752 Ga0207705_103137522 302
94 3300025927 Ga0207687_10116256 Ga0207687_101162562 302
95 3300028573 Ga0265334_10000087 Ga0265334_1000008727 302
96 3300037471 Ga0395905_0307119 Ga0395905_0307119_369_1301 302
97 3300038443 Ga0395901_0501932 Ga0395901_0501932_125_1054 302
98 3300045051 Ga0451576_0010706 Ga0451576_0010706_8515_9447 302
99 3300046517 Ga0495630_0027517 Ga0495630_0027517_1290_2207 302
100 3300048925 Ga0496122_0000970 Ga0496122_0000970_39074_40039 302
101 3300048926 Ga0496123_0000286 Ga0496123_0000286_11541_12506 302
102 3300049523 Ga0501300_001109 Ga0501300_001109_2163_3074 302
103 3300049662 Ga0501222_001645 Ga0501222_001645_1321_2232 302
104 3300049663 Ga0501223_004068 Ga0501223_004068_1472_2383 302
105 3300049669 Ga0501235_008415 Ga0501235_008415_1143_2054 302
106 3300049776 Ga0501280_003588 Ga0501280_003588_781_1692 302
107 3300005327 Ga0070658_10029874 Ga0070658_100298744 303
108 3300005336 Ga0070680_100060619 Ga0070680_1000606194 303
109 3300005548 Ga0070665_100001962 Ga0070665_10000196220 303
110 3300005618 Ga0068864_100020490 Ga0068864_1000204903 303
111 3300005841 Ga0068863_100000237 Ga0068863_1000002373 303
112 3300005844 Ga0068862_100005749 Ga0068862_1000057493 303
113 3300009092 Ga0105250_10007959 Ga0105250_100079592 303
114 3300009093 Ga0105240_10239097 Ga0105240_102390971 303
115 3300009177 Ga0105248_10122381 Ga0105248_101223813 303
116 3300025909 Ga0207705_10028802 Ga0207705_100288024 303
117 3300025909 Ga0207705_10262983 Ga0207705_102629832 303
118 3300025913 Ga0207695_10049103 Ga0207695_100491036 303
119 3300025917 Ga0207660_10076612 Ga0207660_100766121 303
120 3300025941 Ga0207711_10081207 Ga0207711_100812072 303
121 3300026088 Ga0207641_10000007 Ga0207641_100000073 303
122 3300026095 Ga0207676_10016091 Ga0207676_100160912 303
123 3300028379 Ga0268266_10001055 Ga0268266_1000105525 303
124 3300028380 Ga0268265_10000867 Ga0268265_1000086725 303
125 3300031456 Ga0307513_10019936 Ga0307513_100199366 303
126 3300031456 Ga0307513_10227982 Ga0307513_102279821 303
127 3300037418 Ga0395900_0143239 Ga0395900_0143239_167_1081 303
128 3300037471 Ga0395905_0292914 Ga0395905_0292914_478_1392 303
129 3300038443 Ga0395901_0330370 Ga0395901_0330370_506_1420 303
130 3300039447 Ga0436361_0486150 Ga0436361_0486150_728_1666 303
131 3300047320 Ga0495672_0058618 Ga0495672_0058618_1073_1999 303
132 3300050492 nmdc:mga0yw44_342690_c1 nmdc:mga0yw44_342690_c1_12_971 303
133 3300053119 Ga0500595_003763 Ga0500595_003763_1124_2092 303
134 3300003791 Ga0055530_10000043 Ga0055530_1000004351 304
135 3300003794 Ga0055531_10000008 Ga0055531_1000000835 304
136 3300005289 Ga0065704_10130260 Ga0065704_101302602 304
137 3300005327 Ga0070658_10108621 Ga0070658_101086211 304
138 3300005327 Ga0070658_10132898 Ga0070658_101328981 304
139 3300005335 Ga0070666_10040280 Ga0070666_100402801 304
140 3300005339 Ga0070660_100000793 Ga0070660_10000079320 304
141 3300005563 Ga0068855_100265350 Ga0068855_1002653502 304
142 3300005616 Ga0068852_100568272 Ga0068852_1005682721 304
143 3300005842 Ga0068858_100000149 Ga0068858_10000014923 304
144 3300005844 Ga0068862_100003605 Ga0068862_1000036051 304
145 3300006038 Ga0075365_10043277 Ga0075365_100432773 304
146 3300006048 Ga0075363_100028166 Ga0075363_1000281664 304
147 3300006051 Ga0075364_10039509 Ga0075364_100395091 304
148 3300006175 Ga0070712_100003103 Ga0070712_10000310310 304
149 3300006186 Ga0075369_10002444 Ga0075369_100024446 304
150 3300006237 Ga0097621_100300174 Ga0097621_1003001742 304
151 3300006353 Ga0075370_10153451 Ga0075370_101534511 304
152 3300006847 Ga0075431_100000345 Ga0075431_10000034532 304
153 3300006914 Ga0075436_100052725 Ga0075436_1000527254 304
154 3300009093 Ga0105240_10139661 Ga0105240_101396611 304
155 3300009177 Ga0105248_10468206 Ga0105248_104682061 304
156 3300009553 Ga0105249_10000106 Ga0105249_1000010698 304
157 3300009553 Ga0105249_10055183 Ga0105249_100551833 304
158 3300009987 Ga0105030_101777 Ga0105030_1017771 304
159 3300013105 Ga0157369_10194960 Ga0157369_101949603 304
160 3300013306 Ga0163162_10025445 Ga0163162_100254452 304
161 3300013307 Ga0157372_10018360 Ga0157372_100183604 304
162 3300013874 Ga0157514_106483 Ga0157514_1064832 304
163 3300014968 Ga0157379_10033316 Ga0157379_100333162 304
164 3300014968 Ga0157379_10056270 Ga0157379_100562702 304
165 3300021388 Ga0213875_10003794 Ga0213875_100037945 304
166 3300025250 Ga0209026_1009061 Ga0209026_10090612 304
167 3300025250 Ga0209026_1018219 Ga0209026_10182191 304
168 3300025298 Ga0209050_1000026 Ga0209050_1000026147 304
169 3300025304 Ga0209257_1000009 Ga0209257_1000009147 304
170 3300025903 Ga0207680_10012402 Ga0207680_100124024 304
171 3300025909 Ga0207705_10082571 Ga0207705_100825711 304
172 3300025909 Ga0207705_10143108 Ga0207705_101431081 304
173 3300025915 Ga0207693_10005936 Ga0207693_100059369 304
174 3300025919 Ga0207657_10000259 Ga0207657_100002596 304
175 3300025961 Ga0207712_10000593 Ga0207712_100005935 304
176 3300026035 Ga0207703_10000050 Ga0207703_1000005051 304
177 3300028380 Ga0268265_10005646 Ga0268265_1000564610 304
178 3300031250 Ga0265331_10074111 Ga0265331_100741111 304
179 3300035725 Ga0373947_0271502 Ga0373947_0271502_112_1095 304
180 3300037418 Ga0395900_0016676 Ga0395900_0016676_1401_2321 304
181 3300037853 Ga0436364_0049233 Ga0436364_0049233_3075_4007 304
182 3300038443 Ga0395901_0148351 Ga0395901_0148351_161_1123 304
183 3300042004 Ga0439445_0011943 Ga0439445_0011943_925_1905 304
184 3300042006 Ga0439432_000224 Ga0439432_000224_534_1514 304
185 3300046513 Ga0495616_0000032 Ga0495616_0000032_129087_130016 304
186 3300048903 Ga0496100_0077239 Ga0496100_0077239_290_1222 304
187 3300048906 Ga0496103_0014058 Ga0496103_0014058_1857_2789 304
188 3300048908 Ga0496105_0023341 Ga0496105_0023341_137_1069 304
189 3300048909 Ga0496106_0009635 Ga0496106_0009635_1213_2145 304
190 3300048910 Ga0496107_0004120 Ga0496107_0004120_2844_3776 304
191 3300048924 Ga0496121_0001910 Ga0496121_0001910_23148_24077 304
192 3300048929 Ga0496126_0029254 Ga0496126_0029254_3469_4398 304
193 3300049517 Ga0501294_003799 Ga0501294_003799_187_1107 304
194 3300049581 Ga0501047_0261996 Ga0501047_0261996_165_1133 304
195 3300049705 Ga0501225_0004623 Ga0501225_0004623_2032_2952 304
196 3300049742 Ga0501080_0218802 Ga0501080_0218802_188_1156 304
197 3300049777 Ga0501281_00440 Ga0501281_00440_939_1859 304
198 3300049822 Ga0501035_0342488 Ga0501035_0342488_125_1093 304
199 3300050490 nmdc:mga03n38_20616_c1 nmdc:mga03n38_20616_c1_1566_2495 304
200 3300050491 nmdc:mga00v17_4130_c1 nmdc:mga00v17_4130_c1_6413_7342 304
201 3300050492 nmdc:mga0yw44_34460_c1 nmdc:mga0yw44_34460_c1_1914_2843 304
202 3300050510 nmdc:mga06r32_14663_c1 nmdc:mga06r32_14663_c1_188_1135 304
203 3300050514 nmdc:mga08x19_6_c1 nmdc:mga08x19_6_c1_356862_357800 304
204 3300050516 nmdc:mga0sz30_330_c1 nmdc:mga0sz30_330_c1_10014_10943 304
205 3300053121 Ga0500607_000070 Ga0500607_000070_47703_48632 304
206 3300053136 Ga0500559_0000777 Ga0500559_0000777_4953_5882 304
207 3300053136 Ga0500559_0074961 Ga0500559_0074961_440_1369 304
208 3300053178 Ga0500637_0000184 Ga0500637_0000184_16891_17820 304
209 2162886006 SwRhRL3b_contig_4248352 SwRhRL3b_0868.00000360 305
210 2162886007 SwRhRL2b_contig_1302914 SwRhRL2b_0945.00002510 305
211 3300001989 JGI24739J22299_10000005 JGI24739J22299_1000000575 305
212 3300005289 Ga0065704_10096014 Ga0065704_100960142 305
213 3300005295 Ga0065707_10082561 Ga0065707_1008256116 305
214 3300005327 Ga0070658_10000542 Ga0070658_1000054217 305
215 3300005339 Ga0070660_100001590 Ga0070660_1000015908 305
216 3300005356 Ga0070674_100468444 Ga0070674_1004684441 305
217 3300005366 Ga0070659_100000005 Ga0070659_10000000549 305
218 3300005366 Ga0070659_100044635 Ga0070659_1000446353 305
219 3300005614 Ga0068856_100492242 Ga0068856_1004922421 305
220 3300009551 Ga0105238_10325298 Ga0105238_103252982 305
221 3300025304 Ga0209257_1016575 Ga0209257_10165753 305
222 3300025909 Ga0207705_10000520 Ga0207705_1000052017 305
223 3300025919 Ga0207657_10000695 Ga0207657_1000069519 305
224 3300025932 Ga0207690_10000002 Ga0207690_10000002694 305
225 3300025932 Ga0207690_10000033 Ga0207690_1000003349 305
226 3300025932 Ga0207690_10086509 Ga0207690_100865093 305
227 3300037418 Ga0395900_0237991 Ga0395900_0237991_163_1089 305
228 3300037466 Ga0395898_0240789 Ga0395898_0240789_59_985 305
229 3300037471 Ga0395905_0231841 Ga0395905_0231841_60_986 305
230 3300038443 Ga0395901_0287618 Ga0395901_0287618_741_1667 305
231 3300046524 Ga0495648_0002184 Ga0495648_0002184_8218_9177 305
232 3300046660 Ga0495625_0004742 Ga0495625_0004742_4389_5321 305
233 3300046660 Ga0495625_0041293 Ga0495625_0041293_1219_2184 305
234 3300049778 Ga0501282_001129 Ga0501282_001129_1797_2729 305
235 3300053087 Ga0500643_000999 Ga0500643_000999_5409_6344 305
236 3300053739 Ga0500587_000867 Ga0500587_000867_2831_3769 305

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12762

DDE_Tnp_IS1595

ISXO2-like transposase domain

131

274

0.94

PF12760

Zn_Tnp_IS1595

Transposase zinc-ribbon domain

10

60

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4pcq-assembly2.cif.gz_C crystal structure of mtbaldr (rv2779c) 0.8285 79 117
3fm5-assembly3.cif.gz_B x-ray crystal structure of transcriptional regulator (marr family) from rhodococcus sp. rha1 0.8207 79 119
3fm5-assembly3.cif.gz_D x-ray crystal structure of transcriptional regulator (marr family) from rhodococcus sp. rha1 0.8205 80 119
2qww-assembly3.cif.gz_F crystal structure of multiple antibiotic-resistance repressor (marr) (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a resolution 0.8064 78 113
2nyx-assembly2.cif.gz_D crystal structure of rv1404 from mycobacterium tuberculosis 0.8027 79 121
ID Description Score Start End Superfamily
3k2zB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8726 79 113 1.10.10.10
af_P76540_107_166_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8592 80 120 1.10.10.10
1mkmA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8418 79 113 1.10.10.10
2cfxG01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8255 79 117 1.10.10.10
af_A0A0R4ITX8_1_93_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.816 81 113 1.10.10.10
ID Description Score Start End GO Terms
AF-X5UGU4-F1-model_v4 Transposase IS1595 0.983 2 299
AF-A0A7W4PLW7-F1-model_v4 IS1595 family transposase 0.9823 105 299
AF-A0A502Z2A7-F1-model_v4 IS1595 family transposase 0.9799 2 299
AF-A0A258GJ27-F1-model_v4 IS1595 family transposase 0.9779 2 299
AF-A0A4Q1UNP5-F1-model_v4 IS1595 family transposase 0.9761 1 302

Feature Viewer

pLDDT pTM Quality
91.69 0.9 High
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Predicted Structure (AlphaFold2)

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