F346209

General Info

Members Datasets Scaffolds Average Seq Length
233 172 232 438

Family's Representative Sequence

Representative Sequence 3300031090|Ga0265760_10015308|Ga0265760_100153081
Length 530
Sequence MSGRGDRITNPWPAVVRTGPTGAKRQTQRLVSPSEGNEARREGHRISEHFIVLWKPGNSTHGNPVEGRECQVVELLEGNMTGASKPDPVSTKQQRIAELAKQSPEMGFTSLAHHIDLRWLYEAYLRVRPDGAAGVDGQTVEGYTAHLRDNLQSLLDRAKSGTYRAPPVRRVHIPKGTSGDTRPIGIPTFEDKVLQRAVVMVLEPLYEQDFLDCSYGFRPGRSAHQALDSLWQQTMAMGGGWILEVDIRKFFDTLDHAQLRELLQQRVRDGVLLRLIGKWLNAGVLEEGDLTFPEAGTPQGGVISPLLANVYLHYVLDVWFEGAVKPLLKGKAFLIRYADDFVIGFANEGDARRVLEVLPKRFAKYGLTLHPDKTRLVSFHRPPPQPTRTPLQVQARSGTFDLLGFTHFWERSRSGNWVVKRKTAASRLSRALTTIAQWCRLHRHDPLEEQHHTLSQKLRGHYAYYGITGNYSGVRRFQLAVQRIWHKWLSRRRRCGFLSWERFFRLIDRLVLPVARVVHSVYHRAANAAT

Samples

Sample ID Description Type Environment
1 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
48 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
70 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
71 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
72 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
73 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
74 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
79 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
81 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
82 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
83 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
84 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
85 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
86 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
87 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
88 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
89 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
92 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
93 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
94 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
95 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
96 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
97 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
98 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
99 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
104 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
105 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
106 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
107 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
108 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
113 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
114 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
115 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
116 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
117 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
118 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
121 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
122 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
123 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
124 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
125 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
126 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
129 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
130 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
131 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
132 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
133 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
137 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
144 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
145 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
146 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
147 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
155 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
156 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
157 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
158 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
159 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
160 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
161 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
162 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
163 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
164 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
165 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
166 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
167 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
168 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
169 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
170 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
171 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
172 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.28
Metatranscriptomes 1.29
Isolates 0.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.15
Nodule 0
Rhizoplane 6.01
Rhizosphere 83.26
Stem 0
Stem Tuber 0
Unclassified 5.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNXas_1000884 3300000545 Bacteria 1960
2 rootH1_10164265 3300003323 Bacteria 2030
3 Ga0065704_10091763 3300005289 Bacteria 2695
4 Ga0065707_10007164 3300005295 Bacteria 2979
5 Ga0065707_10127337 3300005295 Bacteria 1986
6 Ga0070690_100012773 3300005330 Unclassified 4946
7 Ga0068869_100034728 3300005334 Bacteria 3569
8 Ga0070680_100036191 3300005336 Bacteria 3987
9 Ga0070680_100193258 3300005336 Bacteria 1715
10 Ga0070682_100089489 3300005337 Bacteria 2011
11 Ga0070691_10033471 3300005341 Bacteria 2418
12 Ga0070668_100111560 3300005347 Bacteria 2177
13 Ga0070668_100125567 3300005347 Bacteria 2055
14 Ga0070669_100050618 3300005353 Bacteria 3035
15 Ga0070703_10013818 3300005406 Bacteria 2295
16 Ga0070703_10017960 3300005406 Bacteria 2041
17 Ga0070714_100116809 3300005435 Bacteria 2369
18 Ga0070713_100144572 3300005436 Bacteria 2110
19 Ga0070701_10108711 3300005438 Bacteria 1546
20 Ga0070711_100096390 3300005439 Bacteria 2143
21 Ga0070705_100048566 3300005440 Bacteria 2459
22 Ga0070694_100034176 3300005444 Bacteria 3351
23 Ga0070694_100077550 3300005444 Bacteria 2302
24 Ga0070708_100106016 3300005445 Bacteria 2580
25 Ga0070708_100125495 3300005445 Bacteria 2371
26 Ga0070681_10164754 3300005458 Bacteria 2140
27 Ga0070706_100165260 3300005467 Bacteria 2067
28 Ga0070706_100169113 3300005467 Bacteria 2041
29 Ga0070707_100161453 3300005468 Bacteria 2184
30 Ga0070699_100229113 3300005518 Bacteria 1657
31 Ga0070679_100045921 3300005530 Bacteria 4353
32 Ga0070697_100086591 3300005536 Bacteria 2585
33 Ga0070695_100050692 3300005545 Bacteria 2661
34 Ga0070695_100078628 3300005545 Bacteria 2175
35 Ga0070704_100083495 3300005549 Bacteria 2358
36 Ga0070704_100110217 3300005549 Bacteria 2093
37 Ga0068857_100240234 3300005577 Bacteria 1658
38 Ga0070702_100147312 3300005615 Bacteria 1507
39 Ga0068858_100153208 3300005842 Bacteria 2168
40 Ga0068860_100012290 3300005843 Bacteria 8436
41 Ga0068862_100053341 3300005844 Bacteria 3461
42 Ga0081455_10045975 3300005937 Unclassified 3793
43 Ga0081455_10127587 3300005937 Bacteria 1994
44 Ga0081539_10045817 3300005985 Unclassified 2512
45 Ga0081539_10048072 3300005985 Bacteria 2430
46 Ga0070717_10066643 3300006028 Bacteria 2995
47 Ga0070717_10152963 3300006028 Bacteria 1997
48 Ga0070717_10153128 3300006028 Bacteria 1996
49 Ga0070712_100075246 3300006175 Bacteria 2428
50 Ga0070712_100089038 3300006175 Unclassified 2257
51 Ga0075433_10139983 3300006852 Unclassified 2151
52 Ga0105248_10138318 3300009177 Bacteria 2747
53 Ga0105248_10172956 3300009177 Bacteria 2434
54 Ga0105248_10206970 3300009177 Bacteria 2211
55 Ga0105237_10105872 3300009545 Bacteria 2804
56 Ga0105249_10137473 3300009553 Bacteria 2340
57 Ga0105249_10184955 3300009553 Bacteria 2030
58 Ga0099796_10017117 3300010159 Unclassified 2153
59 Ga0105239_10265649 3300010375 Bacteria 1929
60 Ga0157375_10109616 3300013308 Bacteria 2857
61 Ga0157375_10150453 3300013308 Bacteria 2463
62 Ga0213872_10029796 3300021361 Bacteria 2503
63 Ga0213875_10034852 3300021388 Bacteria 2375
64 Ga0213871_10020030 3300021441 Bacteria 1653
65 Ga0207653_10016505 3300025885 Bacteria 2319
66 Ga0207653_10019103 3300025885 Bacteria 2161
67 Ga0207684_10077310 3300025910 Bacteria 2830
68 Ga0207684_10145025 3300025910 Bacteria 2042
69 Ga0207693_10084831 3300025915 Bacteria 2482
70 Ga0207693_10109374 3300025915 Bacteria 2168
71 Ga0207663_10085603 3300025916 Bacteria 2076
72 Ga0207652_10075706 3300025921 Bacteria 2933
73 Ga0207646_10166584 3300025922 Bacteria 1989
74 Ga0207681_10099911 3300025923 Bacteria 2090
75 Ga0207700_10112457 3300025928 Bacteria 2194
76 Ga0207700_10113736 3300025928 Bacteria 2183
77 Ga0207664_10088926 3300025929 Bacteria 2528
78 Ga0207711_10106545 3300025941 Bacteria 2488
79 Ga0207711_10146061 3300025941 Bacteria 2131
80 Ga0207711_10147561 3300025941 Bacteria 2120
81 Ga0207712_10055282 3300025961 Bacteria 2792
82 Ga0207712_10119155 3300025961 Bacteria 1994
83 Ga0207668_10119416 3300025972 Unclassified 1993
84 Ga0207703_10124266 3300026035 Bacteria 2219
85 Ga0207708_10083405 3300026075 Bacteria 2457
86 Ga0207702_10078684 3300026078 Bacteria 2855
87 Ga0209588_1019617 3300027671 Bacteria 2112
88 Ga0268265_10064065 3300028380 Bacteria 2830
89 Ga0268264_10008770 3300028381 Bacteria 8389
90 Ga0265760_10015308 3300031090 Bacteria 2197
91 Ga0265760_10017098 3300031090 Bacteria 2082
92 Ga0265330_10002678 3300031235 Bacteria 9623
93 Ga0265316_10008730 3300031344 Bacteria 9375
94 Ga0265316_10060016 3300031344 Unclassified 2956
95 Ga0265316_10094582 3300031344 Bacteria 2277
96 Ga0307509_10159305 3300031507 Bacteria 2158
97 Ga0316575_10020606 3300031665 Bacteria 2530
98 Ga0316579_10039284 3300031691 Bacteria 2191
99 Ga0265342_10021118 3300031712 Bacteria 4164
100 Ga0265342_10061545 3300031712 Unclassified 2211
101 Ga0265342_10076621 3300031712 Bacteria 1938
102 Ga0316576_10069655 3300031727 Bacteria 2594
103 Ga0316578_10065013 3300031728 Bacteria 2153
104 Ga0316578_10083773 3300031728 Bacteria 1899
105 Ga0307516_10078001 3300031730 Bacteria 3159
106 Ga0316577_10032221 3300031733 Bacteria 2928
107 Ga0307412_10071532 3300031911 Unclassified 2368
108 Ga0316585_10019021 3300032137 Bacteria 2090
109 Ga0316593_10010650 3300032168 Unclassified 2645
110 Ga0373944_0000963 3300035089 Bacteria 7120
111 Ga0373951_0009025 3300035091 Unclassified 2248
112 Ga0373953_0030912 3300035117 Bacteria 2080
113 Ga0373960_0005825 3300035121 Bacteria 2866
114 Ga0373946_0027515 3300035171 Bacteria 2250
115 Ga0373946_0070154 3300035171 Bacteria 1512
116 Ga0373955_0056939 3300035172 Bacteria 2146
117 Ga0373955_0131091 3300035172 Bacteria 1463
118 Ga0373931_0106434 3300035691 Bacteria 1585
119 Ga0373933_0075808 3300035724 Bacteria 2053
120 Ga0373937_0142176 3300036401 Bacteria 2245
121 Ga0373937_0183879 3300036401 Bacteria 1963
122 Ga0316582_0066390 3300036647 Unclassified 2325
123 Ga0373925_0106543 3300037068 Bacteria 2161
124 Ga0316581_0014179 3300037588 Bacteria 2266
125 Ga0436364_0060847 3300037853 Bacteria 2160
126 Ga0436364_0828298 3300037853 Bacteria 3733
127 Ga0436364_0986490 3300037853 Bacteria 2469
128 Ga0400483_272595 3300039062 Bacteria 2022
129 Ga0400489_32152 3300039093 Bacteria 3591
130 Ga0400489_52370 3300039093 Bacteria 1626
131 Ga0400489_53454 3300039093 Bacteria 2601
132 Ga0436360_1286737 3300039438 Bacteria 2264
133 Ga0436361_0586739 3300039447 Bacteria 2341
134 Ga0436363_1041039 3300039450 Bacteria 2548
135 Ga0436363_1443997 3300039450 Bacteria 1559
136 Ga0436362_0871405 3300039453 Bacteria 2438
137 Ga0451807_0170973 3300041486 Bacteria 1909
138 Ga0451577_0042563 3300042876 Bacteria 4072
139 Ga0451577_0156882 3300042876 Bacteria 2048
140 Ga0466969_0050346 3300044656 Bacteria 2053
141 Ga0466972_0034364 3300044658 Bacteria 2484
142 Ga0466972_0076851 3300044658 Bacteria 1590
143 Ga0466972_0089925 3300044658 Bacteria 1456
144 Ga0453683_0047808 3300044673 Bacteria 2683
145 Ga0466964_0028929 3300044706 Bacteria 2185
146 Ga0453684_0112736 3300044712 Bacteria 3300
147 Ga0453684_0256314 3300044712 Bacteria 2006
148 Ga0466971_0059476 3300044719 Bacteria 1726
149 Ga0466968_0008125 3300044735 Bacteria 4012
150 Ga0466968_0046049 3300044735 Bacteria 1852
151 Ga0466968_0056831 3300044735 Bacteria 1681
152 Ga0466970_0028152 3300044765 Bacteria 2951
153 Ga0466957_0081738 3300044842 Bacteria 2012
154 Ga0451576_0063370 3300045051 Bacteria 3853
155 Ga0451576_0145457 3300045051 Bacteria 2471
156 Ga0451576_0234043 3300045051 Unclassified 1918
157 Ga0451576_0311069 3300045051 Bacteria 1648
158 Ga0466967_0148217 3300045976 Bacteria 2190
159 Ga0495592_0106553 3300046454 Bacteria 1989
160 Ga0495629_0186594 3300046459 Bacteria 1436
161 Ga0495651_0115468 3300046462 Bacteria 1979
162 Ga0495653_0103211 3300046463 Bacteria 2062
163 Ga0495650_0018085 3300046471 Bacteria 3514
164 Ga0495608_0134676 3300046511 Bacteria 1579
165 Ga0495618_0086490 3300046514 Bacteria 2004
166 Ga0495652_0109149 3300046529 Bacteria 2228
167 Ga0495640_0073468 3300046533 Bacteria 2289
168 Ga0495586_0054965 3300046535 Bacteria 2158
169 Ga0495587_0067347 3300046536 Bacteria 2087
170 Ga0495634_0076847 3300046642 Bacteria 2191
171 Ga0495599_0090852 3300046678 Bacteria 1905
172 Ga0495623_0074480 3300046679 Bacteria 2109
173 Ga0495613_0150887 3300046689 Bacteria 1657
174 Ga0495604_0104584 3300047317 Bacteria 2074
175 Ga0495672_0099493 3300047320 Bacteria 1580
176 Ga0495687_039410 3300047443 Bacteria 2090
177 Ga0495675_0076166 3300047444 Bacteria 2114
178 Ga0495684_0107238 3300047471 Bacteria 2110
179 Ga0495602_0125385 3300048088 Bacteria 2058
180 Ga0495602_0202953 3300048088 Bacteria 1511
181 Ga0496100_0147877 3300048903 Bacteria 1672
182 Ga0496100_0179342 3300048903 Bacteria 1531
183 Ga0496104_0149765 3300048907 Bacteria 2240
184 Ga0496104_0176817 3300048907 Bacteria 2044
185 Ga0496104_0183908 3300048907 Bacteria 2000
186 Ga0496105_0001674 3300048908 Bacteria 15802
187 Ga0496105_0121220 3300048908 Bacteria 2156
188 Ga0496106_0140383 3300048909 Bacteria 1900
189 Ga0496109_0134359 3300048912 Bacteria 2311
190 Ga0496112_0229239 3300048915 Bacteria 1812
191 Ga0496114_0047797 3300048917 Bacteria 3559
192 Ga0496115_0086795 3300048918 Bacteria 2553
193 Ga0496115_0125923 3300048918 Bacteria 2110
194 Ga0501034_0161449 3300049571 Bacteria 2212
195 Ga0501036_0133013 3300049572 Bacteria 2099
196 Ga0501067_0016656 3300049583 Bacteria 4061
197 Ga0501069_0015725 3300049585 Bacteria 4056
198 Ga0501070_0108412 3300049586 Bacteria 2294
199 Ga0501071_0069043 3300049587 Bacteria 2572
200 Ga0501072_0210315 3300049588 Bacteria 1550
201 Ga0501073_0019231 3300049589 Bacteria 4934
202 Ga0501073_0090587 3300049589 Bacteria 2125
203 Ga0501075_0209956 3300049591 Bacteria 1485
204 Ga0501080_0058455 3300049742 Bacteria 3589
205 Ga0501081_0064635 3300049743 Bacteria 2541
206 Ga0501083_0017428 3300049744 Bacteria 5006
207 Ga0495601_0077036 3300053077 Bacteria 2135
208 Ga0495601_0077260 3300053077 Bacteria 2132
209 Ga0495655_0006693 3300053083 Bacteria 2107
210 Ga0495655_0012329 3300053083 Bacteria 1740
211 Ga0495595_0052979 3300053084 Bacteria 1884
212 Ga0495619_0051983 3300053085 Bacteria 2708
213 Ga0495619_0079524 3300053085 Bacteria 2205
214 Ga0495619_0101380 3300053085 Bacteria 1960
215 Ga0495619_0180194 3300053085 Bacteria 1462
216 Ga0500647_0026643 3300053091 Bacteria 2727
217 Ga0500640_013752 3300053095 Unclassified 3356
218 Ga0500554_006452 3300053102 Unclassified 2630
219 Ga0500572_005423 3300053111 Unclassified 2888
220 Ga0500595_016187 3300053119 Unclassified 2782
221 Ga0500607_029493 3300053121 Unclassified 3029
222 Ga0500614_000065 3300053123 Bacteria 23001
223 Ga0500559_0019366 3300053136 Unclassified 2876
224 Ga0500619_027409 3300053154 Unclassified 1706
225 Ga0500636_0071557 3300053177 Unclassified 2011
226 Ga0500637_0033899 3300053178 Unclassified 2854
227 Ga0500601_001474 3300053737 Unclassified 2577
228 Ga0590074_005626 3300059423 Bacteria 2077
229 Ga0590075_007459 3300059424 Bacteria 2599
230 Ga0501082_0050392 3300060353 Bacteria 3590
231 Ga0466962_0051348 3300061719 Bacteria 1971
232 Ga0466962_0055716 3300061719 Bacteria 1889

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005445 Ga0070708_100125495 Ga0070708_1001254951 372
2 3300053091 Ga0500647_0026643 Ga0500647_0026643_135_1271 378
3 3300053095 Ga0500640_013752 Ga0500640_013752_1330_2466 378
4 3300053102 Ga0500554_006452 Ga0500554_006452_640_1776 378
5 3300053111 Ga0500572_005423 Ga0500572_005423_1026_2162 378
6 3300053119 Ga0500595_016187 Ga0500595_016187_524_1660 378
7 3300053121 Ga0500607_029493 Ga0500607_029493_1344_2480 378
8 3300053123 Ga0500614_000065 Ga0500614_000065_518_1654 378
9 3300053136 Ga0500559_0019366 Ga0500559_0019366_1123_2259 378
10 3300053154 Ga0500619_027409 Ga0500619_027409_506_1642 378
11 3300053177 Ga0500636_0071557 Ga0500636_0071557_640_1776 378
12 3300053178 Ga0500637_0033899 Ga0500637_0033899_1101_2237 378
13 3300053737 Ga0500601_001474 Ga0500601_001474_637_1773 378
14 3300009177 Ga0105248_10138318 Ga0105248_101383182 379
15 3300009553 Ga0105249_10184955 Ga0105249_101849551 397
16 3300048903 Ga0496100_0179342 Ga0496100_0179342_212_1486 400
17 3300048912 Ga0496109_0134359 Ga0496109_0134359_179_1453 400
18 3300048915 Ga0496112_0229239 Ga0496112_0229239_439_1713 400
19 3300048918 Ga0496115_0125923 Ga0496115_0125923_162_1436 400
20 3300005289 Ga0065704_10091763 Ga0065704_100917632 407
21 3300005295 Ga0065707_10007164 Ga0065707_100071643 407
22 3300021441 Ga0213871_10020030 Ga0213871_100200301 408
23 3300044658 Ga0466972_0089925 Ga0466972_0089925_59_1318 408
24 3300044735 Ga0466968_0056831 Ga0466968_0056831_112_1386 408
25 3300044842 Ga0466957_0081738 Ga0466957_0081738_719_1993 408
26 3300046511 Ga0495608_0134676 Ga0495608_0134676_255_1529 408
27 3300053077 Ga0495601_0077260 Ga0495601_0077260_731_2008 408
28 3300053085 Ga0495619_0180194 Ga0495619_0180194_134_1411 408
29 3300031344 Ga0265316_10060016 Ga0265316_100600161 410
30 3300031712 Ga0265342_10061545 Ga0265342_100615451 410
31 3300005336 Ga0070680_100193258 Ga0070680_1001932582 412
32 3300005438 Ga0070701_10108711 Ga0070701_101087111 412
33 3300005440 Ga0070705_100048566 Ga0070705_1000485662 412
34 3300005444 Ga0070694_100077550 Ga0070694_1000775502 412
35 3300005545 Ga0070695_100050692 Ga0070695_1000506923 412
36 3300005549 Ga0070704_100083495 Ga0070704_1000834953 412
37 3300026075 Ga0207708_10083405 Ga0207708_100834052 412
38 3300042876 Ga0451577_0042563 Ga0451577_0042563_1650_2912 413
39 3300044712 Ga0453684_0112736 Ga0453684_0112736_682_1944 413
40 3300039450 Ga0436363_1443997 Ga0436363_1443997_21_1391 417
41 3300005615 Ga0070702_100147312 Ga0070702_1001473121 418
42 3300025941 Ga0207711_10106545 Ga0207711_101065452 418
43 3300005406 Ga0070703_10017960 Ga0070703_100179602 419
44 3300025885 Ga0207653_10019103 Ga0207653_100191032 419
45 3300021361 Ga0213872_10029796 Ga0213872_100297962 421
46 3300039447 Ga0436361_0586739 Ga0436361_0586739_279_1631 421
47 3300013308 Ga0157375_10109616 Ga0157375_101096161 423
48 3300053084 Ga0495595_0052979 Ga0495595_0052979_237_1577 423
49 3300009177 Ga0105248_10206970 Ga0105248_102069701 424
50 3300025941 Ga0207711_10146061 Ga0207711_101460611 424
51 3300005347 Ga0070668_100111560 Ga0070668_1001115601 425
52 3300005353 Ga0070669_100050618 Ga0070669_1000506182 425
53 3300005844 Ga0068862_100053341 Ga0068862_1000533412 425
54 3300025923 Ga0207681_10099911 Ga0207681_100999111 425
55 3300025961 Ga0207712_10055282 Ga0207712_100552823 425
56 3300025972 Ga0207668_10119416 Ga0207668_101194161 425
57 3300028380 Ga0268265_10064065 Ga0268265_100640651 425
58 3300031728 Ga0316578_10083773 Ga0316578_100837731 425
59 3300031730 Ga0307516_10078001 Ga0307516_100780013 425
60 3300037853 Ga0436364_0828298 Ga0436364_0828298_2183_3514 425
61 3300005435 Ga0070714_100116809 Ga0070714_1001168091 426
62 3300005436 Ga0070713_100144572 Ga0070713_1001445722 426
63 3300005439 Ga0070711_100096390 Ga0070711_1000963901 426
64 3300005985 Ga0081539_10045817 Ga0081539_100458171 426
65 3300025916 Ga0207663_10085603 Ga0207663_100856031 426
66 3300025928 Ga0207700_10112457 Ga0207700_101124571 426
67 3300025929 Ga0207664_10088926 Ga0207664_100889262 426
68 3300006175 Ga0070712_100075246 Ga0070712_1000752462 428
69 3300035171 Ga0373946_0070154 Ga0373946_0070154_41_1375 428
70 3300039093 Ga0400489_32152 Ga0400489_32152_984_2354 428
71 3300041486 Ga0451807_0170973 Ga0451807_0170973_176_1501 428
72 3300045976 Ga0466967_0148217 Ga0466967_0148217_141_1460 428
73 3300048907 Ga0496104_0176817 Ga0496104_0176817_620_1960 428
74 3300048908 Ga0496105_0001674 Ga0496105_0001674_13399_14739 428
75 3300048918 Ga0496115_0086795 Ga0496115_0086795_192_1532 428
76 3300031691 Ga0316579_10039284 Ga0316579_100392841 429
77 3300031727 Ga0316576_10069655 Ga0316576_100696552 429
78 3300031728 Ga0316578_10065013 Ga0316578_100650132 429
79 3300031733 Ga0316577_10032221 Ga0316577_100322211 429
80 3300032137 Ga0316585_10019021 Ga0316585_100190211 429
81 3300032168 Ga0316593_10010650 Ga0316593_100106502 429
82 3300035171 Ga0373946_0027515 Ga0373946_0027515_62_1384 429
83 3300036647 Ga0316582_0066390 Ga0316582_0066390_895_2205 429
84 3300037588 Ga0316581_0014179 Ga0316581_0014179_710_2020 429
85 3300005406 Ga0070703_10013818 Ga0070703_100138181 430
86 3300005842 Ga0068858_100153208 Ga0068858_1001532081 430
87 3300025885 Ga0207653_10016505 Ga0207653_100165052 430
88 3300035089 Ga0373944_0000963 Ga0373944_0000963_4644_5942 430
89 3300045051 Ga0451576_0311069 Ga0451576_0311069_129_1451 430
90 3300048088 Ga0495602_0202953 Ga0495602_0202953_79_1413 430
91 iso_pu_bacteria 2920107658 2920110783 430
92 3300003323 rootH1_10164265 rootH1_101642651 431
93 3300009553 Ga0105249_10137473 Ga0105249_101374731 431
94 3300025961 Ga0207712_10119155 Ga0207712_101191551 431
95 3300005337 Ga0070682_100089489 Ga0070682_1000894891 432
96 3300005458 Ga0070681_10164754 Ga0070681_101647542 432
97 3300005549 Ga0070704_100110217 Ga0070704_1001102171 432
98 3300005577 Ga0068857_100240234 Ga0068857_1002402341 432
99 3300009545 Ga0105237_10105872 Ga0105237_101058721 432
100 3300010159 Ga0099796_10017117 Ga0099796_100171171 432
101 3300010375 Ga0105239_10265649 Ga0105239_102656491 432
102 3300013308 Ga0157375_10150453 Ga0157375_101504531 432
103 3300025928 Ga0207700_10113736 Ga0207700_101137362 432
104 3300026078 Ga0207702_10078684 Ga0207702_100786842 432
105 3300027671 Ga0209588_1019617 Ga0209588_10196172 432
106 3300042876 Ga0451577_0156882 Ga0451577_0156882_103_1425 432
107 3300044658 Ga0466972_0076851 Ga0466972_0076851_178_1515 432
108 3300044712 Ga0453684_0256314 Ga0453684_0256314_70_1410 432
109 3300044719 Ga0466971_0059476 Ga0466971_0059476_310_1629 432
110 3300045051 Ga0451576_0063370 Ga0451576_0063370_163_1503 432
111 3300045051 Ga0451576_0145457 Ga0451576_0145457_114_1436 432
112 3300046533 Ga0495640_0073468 Ga0495640_0073468_870_2195 432
113 3300046535 Ga0495586_0054965 Ga0495586_0054965_553_1896 432
114 3300046642 Ga0495634_0076847 Ga0495634_0076847_673_1998 432
115 3300046689 Ga0495613_0150887 Ga0495613_0150887_139_1479 432
116 3300047320 Ga0495672_0099493 Ga0495672_0099493_80_1405 432
117 3300049572 Ga0501036_0133013 Ga0501036_0133013_131_1459 432
118 3300053083 Ga0495655_0012329 Ga0495655_0012329_236_1573 432
119 3300053085 Ga0495619_0101380 Ga0495619_0101380_488_1813 432
120 3300059423 Ga0590074_005626 Ga0590074_005626_122_1450 432
121 3300059424 Ga0590075_007459 Ga0590075_007459_1167_2495 432
122 3300061719 Ga0466962_0051348 Ga0466962_0051348_387_1706 432
123 3300005843 Ga0068860_100012290 Ga0068860_1000122901 433
124 3300006028 Ga0070717_10152963 Ga0070717_101529632 433
125 3300006852 Ga0075433_10139983 Ga0075433_101399831 433
126 3300025941 Ga0207711_10147561 Ga0207711_101475612 433
127 3300028381 Ga0268264_10008770 Ga0268264_100087703 433
128 3300031235 Ga0265330_10002678 Ga0265330_100026782 433
129 3300031344 Ga0265316_10008730 Ga0265316_100087302 433
130 3300031712 Ga0265342_10021118 Ga0265342_100211182 433
131 3300048903 Ga0496100_0147877 Ga0496100_0147877_201_1553 433
132 3300048907 Ga0496104_0183908 Ga0496104_0183908_109_1461 433
133 3300048908 Ga0496105_0121220 Ga0496105_0121220_108_1460 433
134 3300048909 Ga0496106_0140383 Ga0496106_0140383_104_1456 433
135 3300048917 Ga0496114_0047797 Ga0496114_0047797_1482_2834 433
136 3300005985 Ga0081539_10048072 Ga0081539_100480721 434
137 3300006028 Ga0070717_10066643 Ga0070717_100666432 434
138 3300006028 Ga0070717_10153128 Ga0070717_101531282 434
139 3300009177 Ga0105248_10172956 Ga0105248_101729561 434
140 3300021388 Ga0213875_10034852 Ga0213875_100348523 434
141 3300025915 Ga0207693_10084831 Ga0207693_100848312 434
142 3300026035 Ga0207703_10124266 Ga0207703_101242661 434
143 3300031090 Ga0265760_10015308 Ga0265760_100153081 434
144 3300031090 Ga0265760_10017098 Ga0265760_100170982 434
145 3300031665 Ga0316575_10020606 Ga0316575_100206061 434
146 3300035117 Ga0373953_0030912 Ga0373953_0030912_122_1474 434
147 3300035172 Ga0373955_0056939 Ga0373955_0056939_81_1433 434
148 3300035172 Ga0373955_0131091 Ga0373955_0131091_77_1429 434
149 3300035724 Ga0373933_0075808 Ga0373933_0075808_614_1966 434
150 3300036401 Ga0373937_0142176 Ga0373937_0142176_724_2076 434
151 3300036401 Ga0373937_0183879 Ga0373937_0183879_70_1422 434
152 3300037853 Ga0436364_0060847 Ga0436364_0060847_21_1379 434
153 3300037853 Ga0436364_0986490 Ga0436364_0986490_843_2195 434
154 3300039062 Ga0400483_272595 Ga0400483_272595_332_1678 434
155 3300039093 Ga0400489_52370 Ga0400489_52370_95_1441 434
156 3300039093 Ga0400489_53454 Ga0400489_53454_847_2217 434
157 3300039438 Ga0436360_1286737 Ga0436360_1286737_625_1968 434
158 3300039450 Ga0436363_1041039 Ga0436363_1041039_97_1443 434
159 3300039453 Ga0436362_0871405 Ga0436362_0871405_606_1952 434
160 3300044656 Ga0466969_0050346 Ga0466969_0050346_247_1596 434
161 3300044658 Ga0466972_0034364 Ga0466972_0034364_636_1985 434
162 3300044673 Ga0453683_0047808 Ga0453683_0047808_1016_2380 434
163 3300044706 Ga0466964_0028929 Ga0466964_0028929_609_1958 434
164 3300044735 Ga0466968_0008125 Ga0466968_0008125_1770_3119 434
165 3300044735 Ga0466968_0046049 Ga0466968_0046049_210_1568 434
166 3300044765 Ga0466970_0028152 Ga0466970_0028152_615_1964 434
167 3300046454 Ga0495592_0106553 Ga0495592_0106553_206_1558 434
168 3300046459 Ga0495629_0186594 Ga0495629_0186594_56_1420 434
169 3300046462 Ga0495651_0115468 Ga0495651_0115468_540_1892 434
170 3300046463 Ga0495653_0103211 Ga0495653_0103211_59_1411 434
171 3300046514 Ga0495618_0086490 Ga0495618_0086490_558_1910 434
172 3300046529 Ga0495652_0109149 Ga0495652_0109149_734_2086 434
173 3300046536 Ga0495587_0067347 Ga0495587_0067347_93_1445 434
174 3300046678 Ga0495599_0090852 Ga0495599_0090852_461_1813 434
175 3300046679 Ga0495623_0074480 Ga0495623_0074480_149_1501 434
176 3300047317 Ga0495604_0104584 Ga0495604_0104584_104_1456 434
177 3300047443 Ga0495687_039410 Ga0495687_039410_587_1930 434
178 3300047444 Ga0495675_0076166 Ga0495675_0076166_157_1509 434
179 3300047471 Ga0495684_0107238 Ga0495684_0107238_672_2024 434
180 3300048088 Ga0495602_0125385 Ga0495602_0125385_611_1963 434
181 3300049589 Ga0501073_0019231 Ga0501073_0019231_1793_3136 434
182 3300053077 Ga0495601_0077036 Ga0495601_0077036_176_1528 434
183 3300053083 Ga0495655_0006693 Ga0495655_0006693_96_1442 434
184 3300053085 Ga0495619_0051983 Ga0495619_0051983_141_1493 434
185 3300053085 Ga0495619_0079524 Ga0495619_0079524_96_1448 434
186 3300061719 Ga0466962_0055716 Ga0466962_0055716_450_1799 434
187 3300005467 Ga0070706_100169113 Ga0070706_1001691132 435
188 3300025910 Ga0207684_10145025 Ga0207684_101450251 435
189 3300031911 Ga0307412_10071532 Ga0307412_100715322 435
190 3300005336 Ga0070680_100036191 Ga0070680_1000361912 436
191 3300005444 Ga0070694_100034176 Ga0070694_1000341762 436
192 3300005530 Ga0070679_100045921 Ga0070679_1000459212 436
193 3300005545 Ga0070695_100078628 Ga0070695_1000786282 436
194 3300025921 Ga0207652_10075706 Ga0207652_100757063 436
195 3300049571 Ga0501034_0161449 Ga0501034_0161449_269_1582 436
196 3300049583 Ga0501067_0016656 Ga0501067_0016656_1049_2362 436
197 3300049585 Ga0501069_0015725 Ga0501069_0015725_469_1782 436
198 3300049586 Ga0501070_0108412 Ga0501070_0108412_539_1852 436
199 3300049587 Ga0501071_0069043 Ga0501071_0069043_568_1881 436
200 3300049588 Ga0501072_0210315 Ga0501072_0210315_125_1438 436
201 3300049589 Ga0501073_0090587 Ga0501073_0090587_665_1978 436
202 3300049742 Ga0501080_0058455 Ga0501080_0058455_461_1774 436
203 3300049743 Ga0501081_0064635 Ga0501081_0064635_924_2237 436
204 3300049744 Ga0501083_0017428 Ga0501083_0017428_3253_4566 436
205 3300060353 Ga0501082_0050392 Ga0501082_0050392_808_2121 436
206 3300005295 Ga0065707_10127337 Ga0065707_101273371 437
207 3300005330 Ga0070690_100012773 Ga0070690_1000127735 437
208 3300005334 Ga0068869_100034728 Ga0068869_1000347283 437
209 3300005445 Ga0070708_100106016 Ga0070708_1001060163 437
210 3300005467 Ga0070706_100165260 Ga0070706_1001652601 437
211 3300005468 Ga0070707_100161453 Ga0070707_1001614533 437
212 3300005518 Ga0070699_100229113 Ga0070699_1002291131 437
213 3300005536 Ga0070697_100086591 Ga0070697_1000865912 437
214 3300005937 Ga0081455_10127587 Ga0081455_101275872 437
215 3300006175 Ga0070712_100089038 Ga0070712_1000890381 437
216 3300025910 Ga0207684_10077310 Ga0207684_100773102 437
217 3300025915 Ga0207693_10109374 Ga0207693_101093741 437
218 3300025922 Ga0207646_10166584 Ga0207646_101665841 437
219 3300031344 Ga0265316_10094582 Ga0265316_100945821 437
220 3300031712 Ga0265342_10076621 Ga0265342_100766211 437
221 3300046471 Ga0495650_0018085 Ga0495650_0018085_2058_3374 437
222 3300048907 Ga0496104_0149765 Ga0496104_0149765_147_1487 437
223 3300049591 Ga0501075_0209956 Ga0501075_0209956_133_1473 437
224 3300000545 CNXas_1000884 CNXas_10008841 446
225 3300005341 Ga0070691_10033471 Ga0070691_100334711 446
226 3300005347 Ga0070668_100125567 Ga0070668_1001255672 446
227 3300005937 Ga0081455_10045975 Ga0081455_100459752 446
228 3300031507 Ga0307509_10159305 Ga0307509_101593051 446
229 3300035091 Ga0373951_0009025 Ga0373951_0009025_502_1842 446
230 3300035121 Ga0373960_0005825 Ga0373960_0005825_887_2230 446
231 3300035691 Ga0373931_0106434 Ga0373931_0106434_48_1388 446
232 3300037068 Ga0373925_0106543 Ga0373925_0106543_674_2017 446
233 3300045051 Ga0451576_0234043 Ga0451576_0234043_227_1567 446

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00078

RVT_1

Reverse transcriptase (RNA-dependent DNA polymerase)

173

407

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ar1-assembly2.cif.gz_D structure of a thermostable group ii intron reverse transcriptase with template-primer and its functional and evolutionary implications (rt/duplex (nat)) 0.862 35 412
6ar1-assembly1.cif.gz_A structure of a thermostable group ii intron reverse transcriptase with template-primer and its functional and evolutionary implications (rt/duplex (nat)) 0.8573 35 412
8t2r-assembly1.cif.gz_D structure of a group ii intron ribonucleoprotein in the pre-ligation (pre-2f) state 0.8559 16 416
8bgj-assembly2.cif.gz_B crystal structure of reverse transcriptase domain from caloramator australicus cart-capp 0.8233 102 321
5irf-assembly2.cif.gz_B reverse transcriptase domain of group ii intron maturase from roseburia intestinalis in p1 space group 0.8206 28 323
ID Description Score Start End Superfamily
af_P05511_299_561_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8932 93 298 3.20.20.210
af_Q47688_90_332_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8516 93 298 3.30.70.270
af_A0A1D6ERU1_224_481_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8271 93 298 3.30.70.270
af_A0A0G2JVY3_976_1232_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8194 93 321 3.30.70.270
af_A0A1D6JF34_14_351_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8185 35 297 3.30.70.270
ID Description Score Start End GO Terms
AF-A0A6M0K9P8-F1-model_v4 Group II intron reverse transcriptase/maturase 0.9732 66 260 GO:0003964
AF-A0A518LBH1-F1-model_v4 deleted 0.9717 5 144
AF-A0A7V8SV83-F1-model_v4 Group II intron reverse transcriptase/maturase (EC 2.7.7.49) 0.9713 14 300 GO:0003720
AF-A0A7C5CJM0-F1-model_v4 Group II intron reverse transcriptase/maturase (EC 2.7.7.49) 0.9701 13 443 GO:0003720
AF-X0XIZ8-F1-model_v4 Reverse transcriptase domain-containing protein 0.9692 54 276

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pLDDT pTM Quality
89.71 0.85 High
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Predicted Structure (AlphaFold2)

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