F339206

General Info

Members Datasets Scaffolds Average Seq Length
226 173 215 286

Family's Representative Sequence

Representative Sequence 3300046616|Ga0495668_0003694|Ga0495668_0003694_6112_7065
Length 317
Sequence MVLDVKNNHLEGSFFVIIFDIKIVSFQIIIFMEKIIRPPSGWFMLIISLALLGYCGYVLAAMHTPLGVITGVAALLVFFIIIAGFIAVEPNSSRVLILFGKYCGTAKNSGFIWVNPFFTKRKISLRANNLDTKPVKVNDKQGNPIIIGAVVVWRVENTYKAAFDVDNYASFVVTQIESAIRKLAGHYNYDHFGEDTEEITLRSSADEVSELLEKEVSERLSLAGIHVIEARISHLAYAEEIAHAMLQRQQATAVVAARSKIVEGAVGMVEMALAELSKKSIVTLDEERKAQMVSNLMVVLCGDKTVQPVVNTGTIYQ

Samples

Sample ID Description Type Environment
1 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
2 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
3 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
4 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
5 2643221695 Lysobacter sp. Root494 Isolate Unclassified
6 2739367700 Dyella sp. YR388 Isolate Unclassified
7 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
8 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
9 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
10 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
11 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
12 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
13 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
14 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
15 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
16 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
17 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
18 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
19 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
20 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
26 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
29 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
30 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
31 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
46 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
47 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
57 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
60 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
61 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
64 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
90 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
91 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
92 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
93 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
94 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
95 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
96 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
97 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
105 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
106 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
107 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
108 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
109 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
110 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
111 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
112 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
113 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
114 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
115 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
116 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
117 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
118 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
119 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
122 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
123 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
124 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
125 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
126 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
127 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
128 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
129 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
130 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
131 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
134 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
135 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
136 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
137 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
138 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
139 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
140 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
141 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
142 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
143 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
146 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
154 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
155 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
156 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
157 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
158 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
162 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
171 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
172 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
173 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.13
Metatranscriptomes 0
Isolates 4.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.57
Nodule 0
Rhizoplane 3.1
Rhizosphere 61.5
Stem 0
Stem Tuber 0
Unclassified 12.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000558 3300002737 Bacteria 27440
2 JGI25152J39213_1000146 3300002773 Bacteria 48401
3 JGI25150J39212_1000120 3300002774 Bacteria 44029
4 JGI25151J46595_10000107 3300003187 Bacteria 113288
5 JGI25151J46595_10033127 3300003187 Bacteria 1994
6 JGI25153J46596_10000078 3300003215 Bacteria 113288
7 rootH1_10007253 3300003323 Bacteria 8226
8 Ga0055526_1018357 3300003771 Bacteria 2613
9 Ga0055524_1004874 3300003775 Bacteria 6099
10 Ga0055524_1016538 3300003775 Bacteria 2641
11 Ga0055536_1003913 3300003781 Bacteria 7813
12 Ga0055536_1007708 3300003781 Bacteria 4767
13 Ga0055530_10000975 3300003791 Bacteria 23186
14 Ga0055530_10004428 3300003791 Bacteria 7225
15 Ga0055531_10005760 3300003794 Bacteria 7176
16 Ga0055531_10018235 3300003794 Bacteria 2909
17 Ga0065704_10104183 3300005289 Bacteria 2149
18 Ga0065707_10082263 3300005295 Bacteria 18028
19 Ga0070658_10129765 3300005327 Bacteria 2100
20 Ga0070670_100001053 3300005331 Bacteria 21912
21 Ga0070666_10021461 3300005335 Bacteria 4187
22 Ga0070668_100000056 3300005347 Bacteria 70052
23 Ga0070669_100162189 3300005353 Bacteria 1738
24 Ga0070671_100000601 3300005355 Bacteria 25698
25 Ga0070671_100225134 3300005355 Bacteria 1591
26 Ga0070673_100437485 3300005364 Bacteria 1175
27 Ga0070667_100000215 3300005367 Bacteria 67317
28 Ga0070667_100238188 3300005367 Bacteria 1624
29 Ga0070663_100101427 3300005455 Bacteria 2148
30 Ga0070662_100144953 3300005457 Bacteria 1844
31 Ga0070664_100082982 3300005564 Bacteria 2764
32 Ga0068857_100012754 3300005577 Bacteria 7326
33 Ga0068852_100293381 3300005616 Bacteria 1572
34 Ga0068864_100002862 3300005618 Bacteria 14259
35 Ga0068864_100006135 3300005618 Bacteria 9859
36 Ga0068870_10025669 3300005840 Bacteria 2927
37 Ga0068863_100007196 3300005841 Bacteria 10916
38 Ga0068863_100251886 3300005841 Bacteria 1706
39 Ga0068858_100066505 3300005842 Bacteria 3337
40 Ga0068860_100000049 3300005843 Bacteria 208782
41 Ga0068862_100003039 3300005844 Bacteria 14609
42 Ga0111539_10716645 3300009094 Bacteria 1165
43 Ga0111539_10930493 3300009094 Bacteria 1011
44 Ga0105249_10240703 3300009553 Bacteria 1789
45 Ga0105148_101494 3300009978 Bacteria 1637
46 Ga0105032_100183 3300009979 Bacteria 6475
47 Ga0105029_103997 3300009984 Bacteria 1004
48 Ga0105246_10274781 3300011119 Bacteria 1349
49 Ga0157314_1001037 3300012500 Bacteria 2165
50 Ga0157373_10129838 3300013100 Bacteria 1772
51 Ga0157371_10003069 3300013102 Bacteria 15491
52 Ga0157370_10072456 3300013104 Bacteria 3250
53 Ga0157378_10116299 3300013297 Bacteria 2459
54 Ga0182008_10000880 3300014497 Bacteria 20870
55 Ga0157379_10402800 3300014968 Bacteria 1258
56 Ga0182007_10000099 3300015262 Bacteria 60975
57 Ga0182005_1000334 3300015265 Bacteria 27479
58 Ga0163161_10001792 3300017792 Bacteria 15674
59 Ga0207425_1000028 3300025245 Bacteria 286333
60 Ga0209129_1000065 3300025258 Bacteria 232568
61 Ga0209565_1000209 3300025263 Bacteria 68237
62 Ga0209673_1017941 3300025273 Bacteria 2592
63 Ga0209130_1006676 3300025284 Bacteria 3701
64 Ga0209676_1000034 3300025292 Bacteria 460125
65 Ga0209676_1000540 3300025292 Bacteria 58505
66 Ga0209676_1002244 3300025292 Bacteria 14280
67 Ga0209676_1002785 3300025292 Bacteria 11606
68 Ga0209676_1003295 3300025292 Bacteria 10118
69 Ga0209676_1004586 3300025292 Bacteria 7632
70 Ga0209676_1004740 3300025292 Bacteria 7435
71 Ga0209025_1000002 3300025294 Bacteria 1393142
72 Ga0209025_1006700 3300025294 Bacteria 8842
73 Ga0209025_1043550 3300025294 Bacteria 1889
74 Ga0209564_1001949 3300025295 Bacteria 18260
75 Ga0209564_1006086 3300025295 Bacteria 6637
76 Ga0209758_1000003 3300025297 Bacteria 1398533
77 Ga0209758_1015592 3300025297 Bacteria 3922
78 Ga0209050_1000001 3300025298 Bacteria 3563507
79 Ga0209050_1000707 3300025298 Bacteria 49453
80 Ga0209050_1000998 3300025298 Bacteria 35642
81 Ga0209050_1005281 3300025298 Bacteria 8218
82 Ga0209050_1005756 3300025298 Bacteria 7644
83 Ga0209256_1003748 3300025299 Bacteria 10273
84 Ga0209256_1008258 3300025299 Bacteria 4873
85 Ga0209256_1015084 3300025299 Bacteria 2727
86 Ga0209051_1000357 3300025303 Bacteria 67596
87 Ga0209257_1000133 3300025304 Bacteria 208808
88 Ga0209257_1000500 3300025304 Bacteria 70060
89 Ga0209257_1004990 3300025304 Bacteria 9685
90 Ga0209257_1005537 3300025304 Bacteria 8802
91 Ga0207643_10104469 3300025908 Bacteria 1664
92 Ga0207705_10367414 3300025909 Bacteria 1110
93 Ga0207649_10329772 3300025920 Bacteria 1124
94 Ga0207706_10214797 3300025933 Bacteria 1685
95 Ga0207691_10196218 3300025940 Bacteria 1759
96 Ga0207711_10214247 3300025941 Bacteria 1760
97 Ga0207661_10194313 3300025944 Bacteria 1781
98 Ga0207658_10040351 3300025986 Bacteria 3374
99 Ga0207639_10162015 3300026041 Bacteria 1886
100 Ga0207678_10095897 3300026067 Bacteria 2535
101 Ga0207641_10000545 3300026088 Bacteria 42249
102 Ga0207641_10234907 3300026088 Bacteria 1706
103 Ga0207676_10001939 3300026095 Bacteria 15104
104 Ga0207676_10260536 3300026095 Bacteria 1565
105 Ga0207674_10023722 3300026116 Bacteria 6566
106 Ga0207675_100127139 3300026118 Bacteria 2415
107 Ga0207698_10111943 3300026142 Bacteria 2290
108 Ga0209984_1004471 3300027424 Bacteria 1649
109 Ga0209983_1002676 3300027665 Bacteria 3865
110 Ga0209974_10006070 3300027876 Bacteria 4229
111 Ga0316182_1026813 3300030745 Bacteria 1783
112 Ga0307513_10015185 3300031456 Bacteria 9346
113 Ga0307408_100158465 3300031548 Bacteria 1795
114 Ga0307508_10012835 3300031616 Bacteria 7660
115 Ga0316575_10042008 3300031665 Bacteria 1810
116 Ga0316578_10015683 3300031728 Bacteria 4081
117 Ga0307405_10085197 3300031731 Bacteria 2077
118 Ga0316577_10022188 3300031733 Bacteria 3525
119 Ga0307413_10119926 3300031824 Bacteria 1779
120 Ga0307410_10242499 3300031852 Bacteria 1397
121 Ga0307406_10422946 3300031901 Bacteria 1062
122 Ga0307416_100708380 3300032002 Bacteria 1096
123 Ga0307414_10015704 3300032004 Bacteria 4578
124 Ga0307414_10030075 3300032004 Bacteria 3544
125 Ga0307414_10422682 3300032004 Bacteria 1162
126 Ga0307411_10001055 3300032005 Bacteria 10676
127 Ga0307411_10185273 3300032005 Bacteria 1584
128 Ga0307415_100062894 3300032126 Bacteria 2577
129 Ga0307415_100089188 3300032126 Bacteria 2227
130 Ga0316580_10024353 3300032139 Bacteria 1871
131 Ga0373938_0011445 3300034957 Bacteria 1650
132 Ga0316574_0024690 3300035398 Bacteria 3600
133 Ga0373931_0006743 3300035691 Bacteria 5389
134 Ga0373935_0200711 3300035692 Bacteria 1378
135 Ga0373927_0092306 3300035695 Bacteria 1967
136 Ga0373927_0134068 3300035695 Bacteria 1618
137 Ga0373925_0080927 3300037068 Bacteria 2469
138 Ga0237819_00475 3300038705 Bacteria 13629
139 Ga0237819_06057 3300038705 Bacteria 1846
140 Ga0439436_0010419 3300041404 Bacteria 2835
141 Ga0439439_0008809 3300041406 Bacteria 2388
142 Ga0439465_0001469 3300041413 Bacteria 7639
143 Ga0439465_0001903 3300041413 Bacteria 6836
144 Ga0439465_0008618 3300041413 Bacteria 3217
145 Ga0451843_1385746 3300041509 Bacteria 1391
146 Ga0439449_0004025 3300042007 Bacteria 5688
147 Ga0439449_0007900 3300042007 Bacteria 4039
148 Ga0439462_0005719 3300042015 Bacteria 3073
149 Ga0439440_0007928 3300042993 Bacteria 2169
150 Ga0451576_0032091 3300045051 Bacteria 5597
151 Ga0495627_000425 3300046453 Bacteria 36660
152 Ga0495638_0000065 3300046460 Bacteria 170849
153 Ga0495638_0002252 3300046460 Bacteria 15992
154 Ga0495650_0000652 3300046471 Bacteria 45732
155 Ga0495662_0000337 3300046476 Bacteria 20513
156 Ga0495594_0295424 3300046499 Bacteria 923
157 Ga0495610_0000033 3300046512 Bacteria 204151
158 Ga0495620_0005864 3300046515 Bacteria 6817
159 Ga0495630_0000008 3300046517 Bacteria 337046
160 Ga0495663_0001598 3300046525 Bacteria 7087
161 Ga0495666_0055439 3300046526 Bacteria 1899
162 Ga0495665_0094074 3300046531 Bacteria 1575
163 Ga0495586_0087727 3300046535 Bacteria 1715
164 Ga0495621_0097016 3300046539 Bacteria 1117
165 Ga0495656_0002467 3300046615 Bacteria 6152
166 Ga0495668_0003694 3300046616 Bacteria 11295
167 Ga0495647_0045360 3300046681 Bacteria 1688
168 Ga0495658_0094637 3300046683 Bacteria 1774
169 Ga0495670_0166605 3300046691 Bacteria 1159
170 Ga0495636_0096685 3300047318 Bacteria 1287
171 Ga0495676_0171678 3300047321 Bacteria 1526
172 Ga0495681_0000041 3300047470 Bacteria 119251
173 Ga0495686_0000262 3300047472 Bacteria 94462
174 Ga0495686_0013408 3300047472 Bacteria 5685
175 Ga0495615_0019122 3300048090 Bacteria 1517
176 Ga0496101_0152231 3300048904 Bacteria 1770
177 Ga0496103_0211563 3300048906 Bacteria 1247
178 Ga0496108_0264595 3300048911 Bacteria 1496
179 Ga0496109_0024261 3300048912 Bacteria 5390
180 Ga0496111_0315748 3300048914 Bacteria 1157
181 Ga0496114_0008248 3300048917 Bacteria 8256
182 Ga0496115_0016397 3300048918 Bacteria 5642
183 Ga0496117_0003906 3300048920 Bacteria 16886
184 Ga0496118_0002535 3300048921 Bacteria 24467
185 Ga0496119_0000979 3300048922 Bacteria 36683
186 Ga0496120_0001049 3300048923 Bacteria 36674
187 Ga0496121_0000335 3300048924 Bacteria 98310
188 Ga0496121_0009191 3300048924 Bacteria 11425
189 Ga0496122_0001370 3300048925 Bacteria 39655
190 Ga0496122_0019562 3300048925 Bacteria 6176
191 Ga0496123_0001175 3300048926 Bacteria 38651
192 Ga0496123_0006027 3300048926 Bacteria 11926
193 Ga0496124_0002618 3300048927 Bacteria 23190
194 Ga0496124_0011000 3300048927 Bacteria 9089
195 Ga0496124_0013431 3300048927 Bacteria 7991
196 Ga0496125_0012964 3300048928 Bacteria 8229
197 Ga0496125_0015734 3300048928 Bacteria 7294
198 Ga0496125_0023202 3300048928 Bacteria 5734
199 Ga0496125_0031349 3300048928 Bacteria 4739
200 Ga0496126_0007275 3300048929 Bacteria 12168
201 Ga0501300_006206 3300049523 Bacteria 1763
202 Ga0501031_0064486 3300049568 Bacteria 2386
203 Ga0501033_0124014 3300049570 Bacteria 1873
204 Ga0501034_0000853 3300049571 Bacteria 45135
205 Ga0501034_0013190 3300049571 Bacteria 8511
206 Ga0501034_0038782 3300049571 Bacteria 4825
207 Ga0501043_0000628 3300049579 Bacteria 31174
208 Ga0501275_000514 3300049772 Bacteria 4344
209 Ga0501044_0062431 3300049823 Bacteria 3808
210 Ga0501044_0094100 3300049823 Bacteria 3021
211 nmdc:mga0k408_247537_c1 3300050493 Bacteria 1064
212 nmdc:mga08y16_815085_c1 3300050511 Bacteria 925
213 Ga0500566_0005221 3300053094 Bacteria 7733
214 Ga0500595_006368 3300053119 Bacteria 5015
215 Ga0500616_0001805 3300053153 Bacteria 19482

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049568 Ga0501031_0064486 Ga0501031_0064486_633_1490 241
2 3300049823 Ga0501044_0062431 Ga0501044_0062431_2714_3571 241
3 3300035692 Ga0373935_0200711 Ga0373935_0200711_441_1346 244
4 3300035695 Ga0373927_0134068 Ga0373927_0134068_238_1143 244
5 3300037068 Ga0373925_0080927 Ga0373925_0080927_1134_2039 244
6 3300046531 Ga0495665_0094074 Ga0495665_0094074_335_1240 244
7 3300046683 Ga0495658_0094637 Ga0495658_0094637_284_1189 244
8 3300047321 Ga0495676_0171678 Ga0495676_0171678_584_1489 244
9 3300046691 Ga0495670_0166605 Ga0495670_0166605_47_799 250
10 3300035695 Ga0373927_0092306 Ga0373927_0092306_1038_1856 253
11 3300046499 Ga0495594_0295424 Ga0495594_0295424_17_835 253
12 3300049523 Ga0501300_006206 Ga0501300_006206_831_1691 255
13 3300009979 Ga0105032_100183 Ga0105032_1001836 258
14 3300005364 Ga0070673_100437485 Ga0070673_1004374852 259
15 3300031824 Ga0307413_10119926 Ga0307413_101199263 259
16 3300027424 Ga0209984_1004471 Ga0209984_10044711 261
17 3300027665 Ga0209983_1002676 Ga0209983_10026762 261
18 3300027876 Ga0209974_10006070 Ga0209974_100060702 261
19 3300049772 Ga0501275_000514 Ga0501275_000514_991_1851 262
20 3300025940 Ga0207691_10196218 Ga0207691_101962185 264
21 3300042993 Ga0439440_0007928 Ga0439440_0007928_117_980 264
22 3300049570 Ga0501033_0124014 Ga0501033_0124014_234_1097 264
23 3300049823 Ga0501044_0094100 Ga0501044_0094100_900_1763 264
24 3300030745 Ga0316182_1026813 Ga0316182_10268131 265
25 3300041413 Ga0439465_0008618 Ga0439465_0008618_78_917 265
26 3300047472 Ga0495686_0013408 Ga0495686_0013408_2366_3232 265
27 3300014968 Ga0157379_10402800 Ga0157379_104028001 266
28 3300034957 Ga0373938_0011445 Ga0373938_0011445_43_933 266
29 3300035691 Ga0373931_0006743 Ga0373931_0006743_2701_3591 266
30 3300026118 Ga0207675_100127139 Ga0207675_1001271393 268
31 3300042015 Ga0439462_0005719 Ga0439462_0005719_1259_2173 268
32 3300009978 Ga0105148_101494 Ga0105148_1014944 270
33 3300041413 Ga0439465_0001469 Ga0439465_0001469_2749_3612 270
34 3300042007 Ga0439449_0004025 Ga0439449_0004025_3186_4049 270
35 3300005355 Ga0070671_100225134 Ga0070671_1002251341 271
36 3300005841 Ga0068863_100251886 Ga0068863_1002518865 271
37 3300012500 Ga0157314_1001037 Ga0157314_10010374 271
38 3300041413 Ga0439465_0001903 Ga0439465_0001903_2552_3415 271
39 3300009094 Ga0111539_10930493 Ga0111539_109304931 273
40 3300025292 Ga0209676_1000540 Ga0209676_100054047 273
41 3300025294 Ga0209025_1043550 Ga0209025_10435502 273
42 3300026088 Ga0207641_10234907 Ga0207641_102349071 273
43 3300042007 Ga0439449_0007900 Ga0439449_0007900_2571_3434 273
44 3300046615 Ga0495656_0002467 Ga0495656_0002467_181_1044 273
45 3300048904 Ga0496101_0152231 Ga0496101_0152231_185_1048 273
46 3300048911 Ga0496108_0264595 Ga0496108_0264595_215_1078 273
47 3300048912 Ga0496109_0024261 Ga0496109_0024261_991_1854 273
48 3300048914 Ga0496111_0315748 Ga0496111_0315748_222_1085 273
49 3300053119 Ga0500595_006368 Ga0500595_006368_3940_4839 273
50 3300031616 Ga0307508_10012835 Ga0307508_100128353 274
51 3300035398 Ga0316574_0024690 Ga0316574_0024690_794_1666 275
52 3300031665 Ga0316575_10042008 Ga0316575_100420083 276
53 3300031728 Ga0316578_10015683 Ga0316578_100156832 276
54 3300031733 Ga0316577_10022188 Ga0316577_100221883 276
55 3300032139 Ga0316580_10024353 Ga0316580_100243533 276
56 3300050511 nmdc:mga08y16_815085_c1 nmdc:mga08y16_815085_c1_39_908 276
57 3300046453 Ga0495627_000425 Ga0495627_000425_9055_9969 277
58 3300046471 Ga0495650_0000652 Ga0495650_0000652_27513_28427 277
59 3300047470 Ga0495681_0000041 Ga0495681_0000041_82240_83154 277
60 3300025292 Ga0209676_1004586 Ga0209676_10045863 278
61 3300003775 Ga0055524_1016538 Ga0055524_10165382 279
62 3300025273 Ga0209673_1017941 Ga0209673_10179413 279
63 3300025299 Ga0209256_1015084 Ga0209256_10150843 279
64 3300032005 Ga0307411_10001055 Ga0307411_100010552 279
65 3300003771 Ga0055526_1018357 Ga0055526_10183575 281
66 3300003775 Ga0055524_1004874 Ga0055524_10048742 281
67 3300003781 Ga0055536_1003913 Ga0055536_10039131 281
68 3300003781 Ga0055536_1007708 Ga0055536_10077084 281
69 3300003791 Ga0055530_10000975 Ga0055530_1000097516 281
70 3300003794 Ga0055531_10005760 Ga0055531_1000576010 281
71 3300025284 Ga0209130_1006676 Ga0209130_10066762 281
72 3300025292 Ga0209676_1002785 Ga0209676_10027854 281
73 3300025292 Ga0209676_1003295 Ga0209676_10032959 281
74 3300025292 Ga0209676_1004740 Ga0209676_10047403 281
75 3300025295 Ga0209564_1006086 Ga0209564_10060863 281
76 3300025298 Ga0209050_1005756 Ga0209050_100575610 281
77 3300025299 Ga0209256_1003748 Ga0209256_100374810 281
78 3300025304 Ga0209257_1000133 Ga0209257_100013399 281
79 3300025304 Ga0209257_1005537 Ga0209257_10055373 281
80 3300049579 Ga0501043_0000628 Ga0501043_0000628_4236_5126 281
81 3300031901 Ga0307406_10422946 Ga0307406_104229461 282
82 3300032004 Ga0307414_10015704 Ga0307414_100157044 282
83 3300050493 nmdc:mga0k408_247537_c1 nmdc:mga0k408_247537_c1_21_920 282
84 iso_pu_bacteria 2571042365 2572256285 283
85 iso_pu_bacteria 2576861471 2578459182 283
86 iso_pu_bacteria 2643221579 2643908950 283
87 iso_pu_bacteria 2643221581 2643915509 283
88 iso_pu_bacteria 2643221695 2644528608 283
89 iso_pu_bacteria 2852649853 2852651540 283
90 iso_pu_bacteria 2939622612 2939625093 283
91 3300003323 rootH1_10007253 rootH1_100072536 284
92 3300005331 Ga0070670_100001053 Ga0070670_10000105315 284
93 3300005335 Ga0070666_10021461 Ga0070666_100214612 284
94 3300005347 Ga0070668_100000056 Ga0070668_10000005616 284
95 3300005353 Ga0070669_100162189 Ga0070669_1001621892 284
96 3300005355 Ga0070671_100000601 Ga0070671_10000060128 284
97 3300005367 Ga0070667_100000215 Ga0070667_10000021512 284
98 3300005618 Ga0068864_100002862 Ga0068864_10000286214 284
99 3300005841 Ga0068863_100007196 Ga0068863_10000719612 284
100 3300005842 Ga0068858_100066505 Ga0068858_1000665053 284
101 3300005843 Ga0068860_100000049 Ga0068860_10000004953 284
102 3300005844 Ga0068862_100003039 Ga0068862_10000303913 284
103 3300009553 Ga0105249_10240703 Ga0105249_102407031 284
104 3300025263 Ga0209565_1000209 Ga0209565_100020959 284
105 3300025292 Ga0209676_1002244 Ga0209676_100224415 284
106 3300025295 Ga0209564_1001949 Ga0209564_100194923 284
107 3300025298 Ga0209050_1000001 Ga0209050_1000001937 284
108 3300025298 Ga0209050_1000707 Ga0209050_100070736 284
109 3300025303 Ga0209051_1000357 Ga0209051_100035737 284
110 3300025304 Ga0209257_1000500 Ga0209257_100050064 284
111 3300025941 Ga0207711_10214247 Ga0207711_102142472 284
112 3300026088 Ga0207641_10000545 Ga0207641_100005453 284
113 3300026095 Ga0207676_10001939 Ga0207676_1000193915 284
114 3300046512 Ga0495610_0000033 Ga0495610_0000033_81251_82165 284
115 3300046515 Ga0495620_0005864 Ga0495620_0005864_4958_5872 284
116 3300046539 Ga0495621_0097016 Ga0495621_0097016_197_1096 284
117 3300047472 Ga0495686_0000262 Ga0495686_0000262_88961_89863 284
118 3300048090 Ga0495615_0019122 Ga0495615_0019122_33_932 284
119 3300048906 Ga0496103_0211563 Ga0496103_0211563_208_1113 284
120 3300048918 Ga0496115_0016397 Ga0496115_0016397_3700_4605 284
121 3300048924 Ga0496121_0000335 Ga0496121_0000335_52197_53096 284
122 3300053094 Ga0500566_0005221 Ga0500566_0005221_2493_3398 284
123 3300053153 Ga0500616_0001805 Ga0500616_0001805_12623_13483 284
124 iso_pu_bacteria 8003014200 8003016424 284
125 3300046616 Ga0495668_0003694 Ga0495668_0003694_6112_7065 285
126 iso_pu_bacteria 2765235840 2765578134 285
127 3300005327 Ga0070658_10129765 Ga0070658_101297653 286
128 3300005455 Ga0070663_100101427 Ga0070663_1001014272 286
129 3300005457 Ga0070662_100144953 Ga0070662_1001449532 286
130 3300005564 Ga0070664_100082982 Ga0070664_1000829822 286
131 3300013100 Ga0157373_10129838 Ga0157373_101298382 286
132 3300025909 Ga0207705_10367414 Ga0207705_103674141 286
133 3300025920 Ga0207649_10329772 Ga0207649_103297721 286
134 3300025933 Ga0207706_10214797 Ga0207706_102147972 286
135 3300025944 Ga0207661_10194313 Ga0207661_101943133 286
136 3300026067 Ga0207678_10095897 Ga0207678_100958972 286
137 3300049571 Ga0501034_0013190 Ga0501034_0013190_6983_7849 286
138 3300003791 Ga0055530_10004428 Ga0055530_100044289 287
139 3300005289 Ga0065704_10104183 Ga0065704_101041835 287
140 3300005367 Ga0070667_100238188 Ga0070667_1002381882 287
141 3300005577 Ga0068857_100012754 Ga0068857_1000127541 287
142 3300005616 Ga0068852_100293381 Ga0068852_1002933814 287
143 3300005618 Ga0068864_100006135 Ga0068864_1000061352 287
144 3300005840 Ga0068870_10025669 Ga0068870_100256694 287
145 3300011119 Ga0105246_10274781 Ga0105246_102747811 287
146 3300013102 Ga0157371_10003069 Ga0157371_1000306913 287
147 3300013104 Ga0157370_10072456 Ga0157370_100724562 287
148 3300013297 Ga0157378_10116299 Ga0157378_101162992 287
149 3300014497 Ga0182008_10000880 Ga0182008_1000088013 287
150 3300015262 Ga0182007_10000099 Ga0182007_1000009947 287
151 3300015265 Ga0182005_1000334 Ga0182005_10003346 287
152 3300017792 Ga0163161_10001792 Ga0163161_1000179213 287
153 3300025292 Ga0209676_1000034 Ga0209676_1000034110 287
154 3300025298 Ga0209050_1000998 Ga0209050_100099829 287
155 3300025908 Ga0207643_10104469 Ga0207643_101044692 287
156 3300025986 Ga0207658_10040351 Ga0207658_100403512 287
157 3300026041 Ga0207639_10162015 Ga0207639_101620153 287
158 3300026095 Ga0207676_10260536 Ga0207676_102605361 287
159 3300026116 Ga0207674_10023722 Ga0207674_100237225 287
160 3300026142 Ga0207698_10111943 Ga0207698_101119433 287
161 3300031548 Ga0307408_100158465 Ga0307408_1001584652 287
162 3300032002 Ga0307416_100708380 Ga0307416_1007083802 287
163 3300032004 Ga0307414_10422682 Ga0307414_104226822 287
164 3300032005 Ga0307411_10185273 Ga0307411_101852732 287
165 3300032126 Ga0307415_100089188 Ga0307415_1000891885 287
166 3300038705 Ga0237819_00475 Ga0237819_00475_5719_6585 287
167 3300041404 Ga0439436_0010419 Ga0439436_0010419_1635_2501 287
168 3300041406 Ga0439439_0008809 Ga0439439_0008809_92_958 287
169 3300046460 Ga0495638_0002252 Ga0495638_0002252_11426_12295 287
170 3300046525 Ga0495663_0001598 Ga0495663_0001598_445_1314 287
171 3300047318 Ga0495636_0096685 Ga0495636_0096685_204_1067 287
172 3300048917 Ga0496114_0008248 Ga0496114_0008248_1616_2479 287
173 3300048920 Ga0496117_0003906 Ga0496117_0003906_7900_8769 287
174 3300048921 Ga0496118_0002535 Ga0496118_0002535_10265_11134 287
175 3300048922 Ga0496119_0000979 Ga0496119_0000979_10108_10977 287
176 3300048923 Ga0496120_0001049 Ga0496120_0001049_25704_26573 287
177 3300048924 Ga0496121_0009191 Ga0496121_0009191_4174_5043 287
178 3300048925 Ga0496122_0019562 Ga0496122_0019562_4587_5456 287
179 3300048926 Ga0496123_0006027 Ga0496123_0006027_4410_5279 287
180 3300048927 Ga0496124_0002618 Ga0496124_0002618_12328_13206 287
181 3300048927 Ga0496124_0011000 Ga0496124_0011000_2585_3454 287
182 3300048927 Ga0496124_0013431 Ga0496124_0013431_6471_7340 287
183 3300048928 Ga0496125_0012964 Ga0496125_0012964_3598_4467 287
184 3300048928 Ga0496125_0015734 Ga0496125_0015734_1923_2792 287
185 3300048928 Ga0496125_0023202 Ga0496125_0023202_3285_4154 287
186 3300048928 Ga0496125_0031349 Ga0496125_0031349_3632_4501 287
187 3300048929 Ga0496126_0007275 Ga0496126_0007275_9217_10086 287
188 3300049571 Ga0501034_0000853 Ga0501034_0000853_35113_35976 287
189 3300049571 Ga0501034_0038782 Ga0501034_0038782_1106_1969 287
190 iso_pu_bacteria 2739367700 2739730401 287
191 3300003187 JGI25151J46595_10033127 JGI25151J46595_100331274 288
192 3300003794 Ga0055531_10018235 Ga0055531_100182352 288
193 3300009984 Ga0105029_103997 Ga0105029_1039971 288
194 3300025294 Ga0209025_1006700 Ga0209025_100670012 288
195 3300025297 Ga0209758_1015592 Ga0209758_10155922 288
196 3300025299 Ga0209256_1008258 Ga0209256_10082588 288
197 3300025304 Ga0209257_1004990 Ga0209257_100499010 288
198 3300031456 Ga0307513_10015185 Ga0307513_1001518511 288
199 3300045051 Ga0451576_0032091 Ga0451576_0032091_733_1662 288
200 3300046476 Ga0495662_0000337 Ga0495662_0000337_19183_20049 288
201 3300046517 Ga0495630_0000008 Ga0495630_0000008_259858_260724 288
202 3300046526 Ga0495666_0055439 Ga0495666_0055439_780_1709 288
203 3300046535 Ga0495586_0087727 Ga0495586_0087727_658_1530 288
204 3300046681 Ga0495647_0045360 Ga0495647_0045360_48_950 288
205 3300002773 JGI25152J39213_1000146 JGI25152J39213_100014610 289
206 3300002774 JGI25150J39212_1000120 JGI25150J39212_100012036 289
207 3300003187 JGI25151J46595_10000107 JGI25151J46595_1000010710 289
208 3300003215 JGI25153J46596_10000078 JGI25153J46596_1000007810 289
209 3300025245 Ga0207425_1000028 Ga0207425_1000028100 289
210 3300025258 Ga0209129_1000065 Ga0209129_100006548 289
211 3300025294 Ga0209025_1000002 Ga0209025_1000002172 289
212 3300025297 Ga0209758_1000003 Ga0209758_1000003179 289
213 3300025298 Ga0209050_1005281 Ga0209050_10052815 289
214 3300038705 Ga0237819_06057 Ga0237819_06057_950_1831 289
215 3300041509 Ga0451843_1385746 Ga0451843_1385746_216_1097 289
216 3300048925 Ga0496122_0001370 Ga0496122_0001370_27348_28229 289
217 3300048926 Ga0496123_0001175 Ga0496123_0001175_26342_27223 289
218 3300005295 Ga0065707_10082263 Ga0065707_100822637 290
219 3300009094 Ga0111539_10716645 Ga0111539_107166452 290
220 3300031731 Ga0307405_10085197 Ga0307405_100851972 290
221 3300031852 Ga0307410_10242499 Ga0307410_102424992 290
222 3300032004 Ga0307414_10030075 Ga0307414_100300753 290
223 3300032126 Ga0307415_100062894 Ga0307415_1000628944 290
224 iso_pu_bacteria 2791354901 2791912935 290
225 3300002737 JGI25162J39368_1000558 JGI25162J39368_100055814 291
226 3300046460 Ga0495638_0000065 Ga0495638_0000065_157377_158252 291

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01145

Band_7

SPFH domain / Band 7 family

86

265

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
8gn9-assembly1.cif.gz_A-2 spfh domain of pyrococcus horikoshii stomatin 0.8545 101 211
4fvj-assembly2.cif.gz_B spfh domain of the mouse stomatin (crystal form 2) 0.8535 98 212
8gn9-assembly1.cif.gz_A-2 spfh domain of pyrococcus horikoshii stomatin 0.8322 101 211
4fvj-assembly2.cif.gz_B spfh domain of the mouse stomatin (crystal form 2) 0.8066 98 212
2rpb-assembly1.cif.gz_A the solution structure of membrane protein 0.7564 98 206
ID Description Score Start End Superfamily
af_Q8T4B6_101_212_3.30.479.30 Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain 0.8698 98 206 3.30.479.30
af_Q9VGD7_116_226_3.30.479.30 Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain 0.8646 96 212 3.30.479.30
af_Q8K4G9_162_272_3.30.479.30 Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain 0.8563 98 206 3.30.479.30
af_F1Q9K0_120_233_3.30.479.30 Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain 0.852 96 206 3.30.479.30
af_F1R5A4_90_200_3.30.479.30 Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain 0.8512 98 212 3.30.479.30
ID Description Score Start End GO Terms
AF-A0A7Y3HBW7-F1-model_v4 SPFH domain-containing protein 0.9397 1 209 GO:0016020
AF-A0A3B8YS12-F1-model_v4 Band 7 protein 0.939 3 101 GO:0016020
AF-A0A7Y3HBW7-F1-model_v4 SPFH domain-containing protein 0.931 1 209 GO:0016020
AF-A0A496URU6-F1-model_v4 SPFH domain-containing protein 0.9124 2 121 GO:0016020
AF-A0A661DWU5-F1-model_v4 SPFH domain-containing protein 0.9061 14 219 GO:0016020

Feature Viewer

pLDDT pTM Quality
80.91 0.59 Medium
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Predicted Structure (AlphaFold2)

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