F332379

General Info

Members Datasets Scaffolds Average Seq Length
220 168 207 536

Family's Representative Sequence

Representative Sequence 3300028556|Ga0265337_1006077|Ga0265337_10060773
Length 594
Sequence MTGVLDARARDEAIRALAAGPLDVLVIGGGITGAGTALDAASRGLRVGLVESRDLAAGTSSRSSKLIHGGLRYLEQGDFKLVREALRERDLLVSRLAPHLVHPVPFLYPLYKKVVERPYVGAGLVIYDAMEGVKRPVPHHRHLTTRGALRRAPALRPDRLAGAMLYYDAQVDDARYTITVARTAVRFGATVVTRATATSLLRDGSRVTGASVLDEENGRVFDVRAARVIVCAGVWSDLVHEASGVRAGYQVRMSKGVHLVMPRSAIDADTGMIVRTSKSVLFFIPWDTRWIVGTTDTDWSGDRAEPAATAEDVDYILGEANRVLARPLTRADVLAVYAGLRPLVAAPPALSREHVVDAPLPGLVSIAGGKFTTYRLMARDVVDAAAADLPGPVPASVTAQLSLLGADGLPAIQASSRRLAADYGVPAAVAGHLIARYGSLAVELLDLIRADRALGQPLLDGFPYLRAEVAYAVSHEGALHVEDVLARRVRLLIESPDAGMSAAPEVTAIMSELLGWNRRRRAAELRRYQEFATANAAALATPPLPDVESAAISALQVARHLDRRGTSHPGLSQADLGTSARPGPCGGRYIFPIC

Samples

Sample ID Description Type Environment
1 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
2 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
3 2738541278 Niastella sp. CF465 Isolate Unclassified
4 2738541302 Pedobacter sp. CF074 Isolate Unclassified
5 2739367651 Pedobacter sp. OK291 Isolate Unclassified
6 2818991437 Pedobacter terrae 518 Isolate Unclassified
7 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
8 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
9 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
10 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
11 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
12 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
13 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
14 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
15 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
16 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
17 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
18 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
20 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
21 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
22 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
26 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
51 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
52 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
53 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
54 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
55 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
56 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
61 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
62 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
63 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
84 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
85 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
86 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
87 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
88 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
89 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
90 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
91 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
92 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
93 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
94 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
95 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
96 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
97 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
100 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
101 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
102 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
103 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
109 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
110 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
111 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
112 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
122 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
123 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
124 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
125 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
126 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
127 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
128 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
132 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
133 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
134 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
135 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
136 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
137 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
138 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
139 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
140 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
141 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
142 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
143 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
144 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
145 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
146 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
147 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
152 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
153 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
154 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
155 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
156 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
157 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
162 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
163 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
164 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
165 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
166 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
167 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
168 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.82
Metatranscriptomes 2.27
Isolates 5.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.27
Nodule 0
Rhizoplane 0
Rhizosphere 87.73
Stem 0
Stem Tuber 0
Unclassified 10

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10000099 3300001990 Bacteria 25667
2 rootH2_10063461 3300003320 Bacteria 3037
3 rootL2_10032876 3300003322 Bacteria 5439
4 rootH1_10072925 3300003323 Bacteria 16412
5 rootH1_10090236 3300003323 Bacteria 3868
6 rootH1_10127215 3300003323 Bacteria 3619
7 Ga0065714_10002192 3300005288 Bacteria 92967
8 Ga0065714_10078463 3300005288 Bacteria 2591
9 Ga0070680_100007274 3300005336 Bacteria 8437
10 Ga0070682_100026644 3300005337 Bacteria 3462
11 Ga0070660_100013876 3300005339 Bacteria 5796
12 Ga0070691_10001351 3300005341 Bacteria 10464
13 Ga0070714_100000673 3300005435 Bacteria 24208
14 Ga0070714_100021297 3300005435 Bacteria 5304
15 Ga0070714_100114194 3300005435 Bacteria 2395
16 Ga0070713_100014730 3300005436 Bacteria 5816
17 Ga0070713_100072570 3300005436 Bacteria 2911
18 Ga0070710_10032000 3300005437 Bacteria 2845
19 Ga0070711_100027054 3300005439 Bacteria 3762
20 Ga0070663_100032785 3300005455 Bacteria 3584
21 Ga0070663_100085842 3300005455 Bacteria 2323
22 Ga0068867_100070187 3300005459 Bacteria 2618
23 Ga0070698_100011481 3300005471 Bacteria 9401
24 Ga0070679_100007939 3300005530 Bacteria 9960
25 Ga0068853_100000545 3300005539 Bacteria 25665
26 Ga0070693_100068670 3300005547 Bacteria 2081
27 Ga0070665_100107968 3300005548 Bacteria 2785
28 Ga0068855_100016896 3300005563 Bacteria 8775
29 Ga0068857_100003754 3300005577 Bacteria 12764
30 Ga0068852_100001189 3300005616 Bacteria 17258
31 Ga0068852_100005306 3300005616 Bacteria 9199
32 Ga0081540_1000704 3300005983 Bacteria 31058
33 Ga0070717_10059510 3300006028 Bacteria 3161
34 Ga0070717_10131643 3300006028 Bacteria 2151
35 Ga0070712_100019446 3300006175 Bacteria 4430
36 Ga0105240_10021676 3300009093 Bacteria 8542
37 Ga0105240_10068355 3300009093 Bacteria 4400
38 Ga0105240_10091991 3300009093 Bacteria 3704
39 Ga0105237_10137412 3300009545 Bacteria 2438
40 Ga0105238_10088223 3300009551 Bacteria 3088
41 Ga0105239_10011806 3300010375 Bacteria 9748
42 Ga0157371_10000034 3300013102 Bacteria 223947
43 Ga0157371_10003817 3300013102 Bacteria 13465
44 Ga0157371_10030112 3300013102 Bacteria 3917
45 Ga0157371_10043232 3300013102 Bacteria 3210
46 Ga0157370_10018622 3300013104 Bacteria 6981
47 Ga0157370_10047692 3300013104 Bacteria 4106
48 Ga0157370_10052352 3300013104 Bacteria 3898
49 Ga0157370_10061045 3300013104 Bacteria 3578
50 Ga0157369_10000002 3300013105 Bacteria 524510
51 Ga0157369_10001882 3300013105 Bacteria 25309
52 Ga0157369_10018124 3300013105 Bacteria 7898
53 Ga0157369_10118341 3300013105 Bacteria 2812
54 Ga0163162_10000159 3300013306 Bacteria 62464
55 Ga0163162_10007356 3300013306 Bacteria 10702
56 Ga0157372_10000960 3300013307 Bacteria 31427
57 Ga0157372_10001758 3300013307 Bacteria 23488
58 Ga0157372_10010588 3300013307 Bacteria 9811
59 Ga0157372_10028728 3300013307 Bacteria 6071
60 Ga0157372_10043147 3300013307 Bacteria 4992
61 Ga0157372_10054611 3300013307 Bacteria 4457
62 Ga0157372_10098322 3300013307 Bacteria 3339
63 Ga0163163_10044131 3300014325 Bacteria 4373
64 Ga0182008_10006177 3300014497 Bacteria 6730
65 Ga0182006_1000365 3300015261 Bacteria 37791
66 Ga0182006_1000565 3300015261 Bacteria 27608
67 Ga0182007_10000001 3300015262 Bacteria 1127301
68 Ga0183373_1010 3300015682 Bacteria 196982
69 Ga0183365_10004 3300015684 Bacteria 333304
70 Ga0163161_10072179 3300017792 Bacteria 2527
71 Ga0197907_10960244 3300020069 Bacteria 1835
72 Ga0206356_10319174 3300020070 Bacteria 2573
73 Ga0206349_1095916 3300020075 Bacteria 2067
74 Ga0206353_10322874 3300020082 Bacteria 2122
75 Ga0213872_10032175 3300021361 Bacteria 2404
76 Ga0213874_10014130 3300021377 Bacteria 2082
77 Ga0213876_10002920 3300021384 Bacteria 9908
78 Ga0224712_10023410 3300022467 Bacteria 2144
79 Ga0207692_10027773 3300025898 Bacteria 2669
80 Ga0207647_10000418 3300025904 Bacteria 34995
81 Ga0207647_10000480 3300025904 Bacteria 32267
82 Ga0207647_10002099 3300025904 Bacteria 15256
83 Ga0207699_10010707 3300025906 Bacteria 4612
84 Ga0207699_10019478 3300025906 Bacteria 3619
85 Ga0207705_10045464 3300025909 Bacteria 3155
86 Ga0207654_10016419 3300025911 Bacteria 3856
87 Ga0207695_10032322 3300025913 Bacteria 5727
88 Ga0207695_10132937 3300025913 Bacteria 2444
89 Ga0207693_10056147 3300025915 Bacteria 3087
90 Ga0207660_10003399 3300025917 Bacteria 10374
91 Ga0207657_10010232 3300025919 Bacteria 9369
92 Ga0207652_10042461 3300025921 Bacteria 3871
93 Ga0207664_10031485 3300025929 Bacteria 4058
94 Ga0207664_10105598 3300025929 Bacteria 2334
95 Ga0207690_10112726 3300025932 Bacteria 1961
96 Ga0207667_10000449 3300025949 Bacteria 55183
97 Ga0207667_10002773 3300025949 Bacteria 21677
98 Ga0207639_10050075 3300026041 Bacteria 3171
99 Ga0207678_10001339 3300026067 Bacteria 22702
100 Ga0207678_10020978 3300026067 Bacteria 5726
101 Ga0207648_10082587 3300026089 Bacteria 2802
102 Ga0207674_10007385 3300026116 Bacteria 12801
103 Ga0207698_10016455 3300026142 Bacteria 4985
104 Ga0207698_10046311 3300026142 Bacteria 3283
105 Ga0268266_10107787 3300028379 Bacteria 2464
106 Ga0265337_1006077 3300028556 Bacteria 4701
107 Ga0265326_10004182 3300028558 Bacteria 4650
108 Ga0265319_1001608 3300028563 Bacteria 13175
109 Ga0265334_10001241 3300028573 Bacteria 12461
110 Ga0265323_10007679 3300028653 Bacteria 4465
111 Ga0265322_10001371 3300028654 Bacteria 8044
112 Ga0307515_10053528 3300028794 Bacteria 5952
113 Ga0307515_10074849 3300028794 Bacteria 4521
114 Ga0265338_10002250 3300028800 Bacteria 29378
115 Ga0265338_10002683 3300028800 Bacteria 26165
116 Ga0265338_10002686 3300028800 Bacteria 26140
117 Ga0265324_10005151 3300029957 Bacteria 5703
118 Ga0316182_1349497 3300030745 Bacteria 2319
119 Ga0265320_10016168 3300031240 Bacteria 4191
120 Ga0265325_10040392 3300031241 Bacteria 2450
121 Ga0265340_10020937 3300031247 Bacteria 3354
122 Ga0265327_10000023 3300031251 Bacteria 382703
123 Ga0265327_10007914 3300031251 Bacteria 8055
124 Ga0265316_10020135 3300031344 Bacteria 5685
125 Ga0307408_100000217 3300031548 Bacteria 61460
126 Ga0307408_100000365 3300031548 Bacteria 41732
127 Ga0307408_100000590 3300031548 Bacteria 31207
128 Ga0307408_100050097 3300031548 Bacteria 3002
129 Ga0265313_10001654 3300031595 Bacteria 20661
130 Ga0265313_10022603 3300031595 Bacteria 3407
131 Ga0307508_10000449 3300031616 Bacteria 49299
132 Ga0265314_10005684 3300031711 Bacteria 11198
133 Ga0265342_10007007 3300031712 Bacteria 8324
134 Ga0316576_10096223 3300031727 Bacteria 2210
135 Ga0307405_10000026 3300031731 Bacteria 118954
136 Ga0307407_10000032 3300031903 Bacteria 87003
137 Ga0307412_10015734 3300031911 Bacteria 4490
138 Ga0307416_100000045 3300032002 Bacteria 126832
139 Ga0307416_100024956 3300032002 Bacteria 4374
140 Ga0307414_10000081 3300032004 Bacteria 87893
141 Ga0373923_0009067 3300035111 Bacteria 3577
142 Ga0373953_0007676 3300035117 Bacteria 3624
143 Ga0373956_0011375 3300035119 Bacteria 3665
144 Ga0373924_0016175 3300035410 Bacteria 2846
145 Ga0373925_0000001 3300037068 Bacteria 402692
146 Ga0395899_0001852 3300037312 Bacteria 17507
147 Ga0395898_0016269 3300037466 Bacteria 7612
148 Ga0395905_0000257 3300037471 Bacteria 79555
149 Ga0395905_0010500 3300037471 Bacteria 9005
150 Ga0436364_0918101 3300037853 Bacteria 3912
151 Ga0436365_1661535 3300039437 Bacteria 12396
152 Ga0436361_1107128 3300039447 Bacteria 10025
153 Ga0451577_0000260 3300042876 Bacteria 104156
154 Ga0451577_0001851 3300042876 Bacteria 26948
155 Ga0466969_0001415 3300044656 Bacteria 12927
156 Ga0466972_0000012 3300044658 Bacteria 246338
157 Ga0453683_0000149 3300044673 Bacteria 102898
158 Ga0466966_0000437 3300044684 Bacteria 26827
159 Ga0466966_0007033 3300044684 Bacteria 7450
160 Ga0466961_0003472 3300044693 Bacteria 9823
161 Ga0466961_0007233 3300044693 Bacteria 7064
162 Ga0466963_0034272 3300044694 Bacteria 3303
163 Ga0453684_0000836 3300044712 Bacteria 103922
164 Ga0466971_0000095 3300044719 Bacteria 32391
165 Ga0466957_0000308 3300044842 Bacteria 23942
166 Ga0466957_0001081 3300044842 Bacteria 14065
167 Ga0466959_0000240 3300045049 Bacteria 34052
168 Ga0466958_0005584 3300045836 Bacteria 6783
169 Ga0495651_0030535 3300046462 Bacteria 4202
170 Ga0495653_0041036 3300046463 Bacteria 3614
171 Ga0495650_0000216 3300046471 Bacteria 121086
172 Ga0495610_0000126 3300046512 Bacteria 85368
173 Ga0495610_0002471 3300046512 Bacteria 15504
174 Ga0495652_0057388 3300046529 Bacteria 3301
175 Ga0495622_0002867 3300046557 Bacteria 8230
176 Ga0495667_0045588 3300046559 Bacteria 2902
177 Ga0495658_0064936 3300046683 Bacteria 2104
178 Ga0495604_0099172 3300047317 Bacteria 2144
179 Ga0495672_0006331 3300047320 Bacteria 9198
180 Ga0495686_0023905 3300047472 Bacteria 4020
181 Ga0495602_0145641 3300048088 Bacteria 1869
182 Ga0496119_0026667 3300048922 Bacteria 3998
183 Ga0496121_0104076 3300048924 Bacteria 2182
184 Ga0496126_0042815 3300048929 Bacteria 4180
185 Ga0501031_0013708 3300049568 Bacteria 5283
186 Ga0501039_0057002 3300049575 Bacteria 3026
187 Ga0501040_0066013 3300049576 Bacteria 2493
188 Ga0501048_0002232 3300049582 Bacteria 14757
189 Ga0501068_0070171 3300049584 Bacteria 2137
190 Ga0501071_0002783 3300049587 Bacteria 10745
191 Ga0501072_0001135 3300049588 Bacteria 19762
192 Ga0501074_0056329 3300049590 Bacteria 2833
193 Ga0501075_0121878 3300049591 Bacteria 1984
194 Ga0501076_0012730 3300049592 Bacteria 6296
195 Ga0501079_0060997 3300049741 Bacteria 2909
196 Ga0501080_0028216 3300049742 Bacteria 5220
197 Ga0501044_0216491 3300049823 Bacteria 1867
198 Ga0501045_0033002 3300049824 Bacteria 3753
199 Ga0500635_0000841 3300053080 Bacteria 7578
200 Ga0500578_0000012 3300053086 Bacteria 188658
201 Ga0500583_0000027 3300053092 Bacteria 109138
202 Ga0500583_0000695 3300053092 Bacteria 9839
203 Ga0500595_000019 3300053119 Bacteria 168119
204 Ga0501084_0001633 3300054114 Bacteria 17798
205 Ga0501082_0123149 3300060353 Bacteria 2248
206 Ga0466962_0006325 3300061719 Bacteria 5682
207 Ga0530510_0103704 3300061734 Bacteria 2080

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049568 Ga0501031_0013708 Ga0501031_0013708_26_1468 447
2 3300049584 Ga0501068_0070171 Ga0501068_0070171_618_2060 447
3 3300031595 Ga0265313_10001654 Ga0265313_1000165418 452
4 3300046557 Ga0495622_0002867 Ga0495622_0002867_2258_3805 487
5 3300047320 Ga0495672_0006331 Ga0495672_0006331_2738_4285 487
6 3300053080 Ga0500635_0000841 Ga0500635_0000841_1089_2636 487
7 3300005471 Ga0070698_100011481 Ga0070698_1000114817 490
8 3300035410 Ga0373924_0016175 Ga0373924_0016175_725_2422 490
9 3300046462 Ga0495651_0030535 Ga0495651_0030535_214_1905 490
10 3300046529 Ga0495652_0057388 Ga0495652_0057388_95_1792 490
11 3300047317 Ga0495604_0099172 Ga0495604_0099172_125_1822 490
12 3300048088 Ga0495602_0145641 Ga0495602_0145641_37_1734 490
13 3300005439 Ga0070711_100027054 Ga0070711_1000270542 492
14 3300006028 Ga0070717_10059510 Ga0070717_100595102 492
15 3300025906 Ga0207699_10010707 Ga0207699_100107072 495
16 3300025929 Ga0207664_10105598 Ga0207664_101055982 495
17 3300021384 Ga0213876_10002920 Ga0213876_100029205 496
18 3300039437 Ga0436365_1661535 Ga0436365_1661535_3644_5206 496
19 3300013102 Ga0157371_10000034 Ga0157371_1000003469 498
20 3300005436 Ga0070713_100014730 Ga0070713_1000147306 500
21 3300028800 Ga0265338_10002250 Ga0265338_100022508 500
22 3300037312 Ga0395899_0001852 Ga0395899_0001852_6919_8490 500
23 3300044656 Ga0466969_0001415 Ga0466969_0001415_11372_12913 500
24 3300044684 Ga0466966_0000437 Ga0466966_0000437_5109_6650 500
25 3300044693 Ga0466961_0003472 Ga0466961_0003472_5804_7345 500
26 3300044694 Ga0466963_0034272 Ga0466963_0034272_607_2148 500
27 3300044719 Ga0466971_0000095 Ga0466971_0000095_5179_6720 500
28 3300044842 Ga0466957_0000308 Ga0466957_0000308_16643_18184 500
29 3300045049 Ga0466959_0000240 Ga0466959_0000240_29065_30606 500
30 3300045836 Ga0466958_0005584 Ga0466958_0005584_1621_3162 500
31 3300048929 Ga0496126_0042815 Ga0496126_0042815_1720_3417 500
32 3300061719 Ga0466962_0006325 Ga0466962_0006325_1512_3053 500
33 3300028800 Ga0265338_10002686 Ga0265338_1000268618 502
34 3300053119 Ga0500595_000019 Ga0500595_000019_112185_113741 505
35 3300025949 Ga0207667_10002773 Ga0207667_100027738 506
36 3300042876 Ga0451577_0001851 Ga0451577_0001851_16481_18070 507
37 3300049575 Ga0501039_0057002 Ga0501039_0057002_1057_2709 508
38 3300049576 Ga0501040_0066013 Ga0501040_0066013_558_2210 508
39 3300049582 Ga0501048_0002232 Ga0501048_0002232_287_1939 508
40 3300049587 Ga0501071_0002783 Ga0501071_0002783_1073_2725 508
41 3300049588 Ga0501072_0001135 Ga0501072_0001135_1241_2893 508
42 3300049590 Ga0501074_0056329 Ga0501074_0056329_39_1691 508
43 3300049591 Ga0501075_0121878 Ga0501075_0121878_183_1835 508
44 3300049592 Ga0501076_0012730 Ga0501076_0012730_3349_5001 508
45 3300049741 Ga0501079_0060997 Ga0501079_0060997_485_2137 508
46 3300049824 Ga0501045_0033002 Ga0501045_0033002_1806_3458 508
47 3300054114 Ga0501084_0001633 Ga0501084_0001633_1255_2907 508
48 3300060353 Ga0501082_0123149 Ga0501082_0123149_283_1935 508
49 3300061734 Ga0530510_0103704 Ga0530510_0103704_264_1916 508
50 3300003323 rootH1_10127215 rootH1_101272153 509
51 3300025909 Ga0207705_10045464 Ga0207705_100454642 509
52 3300026067 Ga0207678_10020978 Ga0207678_100209785 509
53 3300037471 Ga0395905_0010500 Ga0395905_0010500_4760_6289 509
54 3300013306 Ga0163162_10000159 Ga0163162_1000015917 510
55 3300028794 Ga0307515_10053528 Ga0307515_100535282 510
56 3300005983 Ga0081540_1000704 Ga0081540_100070423 511
57 3300028556 Ga0265337_1006077 Ga0265337_10060773 511
58 3300028558 Ga0265326_10004182 Ga0265326_100041823 511
59 3300028563 Ga0265319_1001608 Ga0265319_10016089 511
60 3300028573 Ga0265334_10001241 Ga0265334_100012418 511
61 3300028653 Ga0265323_10007679 Ga0265323_100076794 511
62 3300028654 Ga0265322_10001371 Ga0265322_100013715 511
63 3300028800 Ga0265338_10002683 Ga0265338_100026832 511
64 3300029957 Ga0265324_10005151 Ga0265324_100051512 511
65 3300031240 Ga0265320_10016168 Ga0265320_100161683 511
66 3300031241 Ga0265325_10040392 Ga0265325_100403922 511
67 3300031247 Ga0265340_10020937 Ga0265340_100209373 511
68 3300031344 Ga0265316_10020135 Ga0265316_100201354 511
69 3300031595 Ga0265313_10022603 Ga0265313_100226032 511
70 3300031711 Ga0265314_10005684 Ga0265314_100056842 511
71 3300031712 Ga0265342_10007007 Ga0265342_100070075 511
72 3300047472 Ga0495686_0023905 Ga0495686_0023905_1137_2723 511
73 3300003320 rootH2_10063461 rootH2_100634612 514
74 3300013307 Ga0157372_10010588 Ga0157372_100105884 514
75 3300031548 Ga0307408_100050097 Ga0307408_1000500972 514
76 3300031731 Ga0307405_10000026 Ga0307405_1000002645 514
77 3300032004 Ga0307414_10000081 Ga0307414_1000008134 514
78 3300037068 Ga0373925_0000001 Ga0373925_0000001_179763_181472 514
79 3300037471 Ga0395905_0000257 Ga0395905_0000257_17091_18635 514
80 3300005455 Ga0070663_100032785 Ga0070663_1000327853 515
81 3300014497 Ga0182008_10006177 Ga0182008_100061775 515
82 iso_pu_bacteria 2585427687 2586208716 515
83 iso_pu_bacteria 2738541302 2738853606 515
84 iso_pu_bacteria 2739367651 2739588834 515
85 iso_pu_bacteria 2818991437 2819548814 515
86 iso_pu_bacteria 2842722452 2842726284 515
87 iso_pu_bacteria 2842909656 2842910538 515
88 iso_pu_bacteria 2849281842 2849282209 515
89 iso_pu_bacteria 2902048731 2902051422 515
90 iso_pu_bacteria 2904445276 2904445542 515
91 iso_pu_bacteria 2945997725 2946000850 515
92 iso_pu_bacteria 2954016120 2954017760 515
93 3300014325 Ga0163163_10044131 Ga0163163_100441313 516
94 3300015684 Ga0183365_10004 Ga0183365_10004121 516
95 3300046683 Ga0495658_0064936 Ga0495658_0064936_252_1826 516
96 3300048924 Ga0496121_0104076 Ga0496121_0104076_318_1883 516
97 3300005337 Ga0070682_100026644 Ga0070682_1000266442 517
98 3300005339 Ga0070660_100013876 Ga0070660_1000138766 517
99 3300005436 Ga0070713_100072570 Ga0070713_1000725702 517
100 3300005530 Ga0070679_100007939 Ga0070679_1000079396 517
101 3300005616 Ga0068852_100005306 Ga0068852_1000053065 517
102 3300013102 Ga0157371_10043232 Ga0157371_100432323 517
103 3300013104 Ga0157370_10061045 Ga0157370_100610453 517
104 3300013105 Ga0157369_10118341 Ga0157369_101183413 517
105 3300013307 Ga0157372_10028728 Ga0157372_100287283 517
106 3300025904 Ga0207647_10000418 Ga0207647_100004189 517
107 3300025919 Ga0207657_10010232 Ga0207657_100102328 517
108 3300025932 Ga0207690_10112726 Ga0207690_101127262 517
109 3300026142 Ga0207698_10016455 Ga0207698_100164552 517
110 3300026142 Ga0207698_10046311 Ga0207698_100463112 517
111 3300037466 Ga0395898_0016269 Ga0395898_0016269_4116_5840 517
112 3300044658 Ga0466972_0000012 Ga0466972_0000012_33684_35255 517
113 3300003322 rootL2_10032876 rootL2_100328762 518
114 3300003323 rootH1_10072925 rootH1_100729253 518
115 3300003323 rootH1_10090236 rootH1_100902362 518
116 3300005336 Ga0070680_100007274 Ga0070680_1000072745 518
117 3300005341 Ga0070691_10001351 Ga0070691_1000135112 518
118 3300005547 Ga0070693_100068670 Ga0070693_1000686701 518
119 3300005548 Ga0070665_100107968 Ga0070665_1001079683 518
120 3300009093 Ga0105240_10091991 Ga0105240_100919912 518
121 3300009545 Ga0105237_10137412 Ga0105237_101374121 518
122 3300025904 Ga0207647_10002099 Ga0207647_100020993 518
123 3300025911 Ga0207654_10016419 Ga0207654_100164192 518
124 3300025913 Ga0207695_10132937 Ga0207695_101329372 518
125 3300025917 Ga0207660_10003399 Ga0207660_100033995 518
126 3300025921 Ga0207652_10042461 Ga0207652_100424612 518
127 3300026041 Ga0207639_10050075 Ga0207639_100500753 518
128 3300026067 Ga0207678_10001339 Ga0207678_100013394 518
129 3300028379 Ga0268266_10107787 Ga0268266_101077873 518
130 3300031251 Ga0265327_10007914 Ga0265327_100079144 518
131 3300031548 Ga0307408_100000365 Ga0307408_10000036522 518
132 3300031727 Ga0316576_10096223 Ga0316576_100962232 518
133 3300044842 Ga0466957_0001081 Ga0466957_0001081_6741_8315 518
134 3300049823 Ga0501044_0216491 Ga0501044_0216491_38_1612 518
135 3300053086 Ga0500578_0000012 Ga0500578_0000012_36006_37580 518
136 3300053092 Ga0500583_0000027 Ga0500583_0000027_27067_28641 518
137 3300053092 Ga0500583_0000695 Ga0500583_0000695_7342_8916 518
138 iso_pu_bacteria 2738541278 2738727405 518
139 3300005288 Ga0065714_10078463 Ga0065714_100784632 519
140 3300005435 Ga0070714_100000673 Ga0070714_10000067320 519
141 3300005435 Ga0070714_100021297 Ga0070714_1000212972 519
142 3300013104 Ga0157370_10052352 Ga0157370_100523523 519
143 3300013105 Ga0157369_10000002 Ga0157369_10000002212 519
144 3300015261 Ga0182006_1000365 Ga0182006_100036528 519
145 3300015261 Ga0182006_1000565 Ga0182006_100056516 519
146 3300015262 Ga0182007_10000001 Ga0182007_10000001561 519
147 3300015682 Ga0183373_1010 Ga0183373_1010188 519
148 3300017792 Ga0163161_10072179 Ga0163161_100721792 519
149 3300025929 Ga0207664_10031485 Ga0207664_100314852 519
150 3300028794 Ga0307515_10074849 Ga0307515_100748493 519
151 3300031251 Ga0265327_10000023 Ga0265327_10000023285 519
152 3300031903 Ga0307407_10000032 Ga0307407_1000003277 519
153 3300032002 Ga0307416_100000045 Ga0307416_10000004556 519
154 3300042876 Ga0451577_0000260 Ga0451577_0000260_27328_28890 519
155 3300044712 Ga0453684_0000836 Ga0453684_0000836_42851_44413 519
156 3300046512 Ga0495610_0000126 Ga0495610_0000126_10523_12115 519
157 3300046512 Ga0495610_0002471 Ga0495610_0002471_1728_3296 519
158 3300049742 Ga0501080_0028216 Ga0501080_0028216_121_1680 519
159 iso_pu_bacteria 2675903060 2676487615 519
160 3300005288 Ga0065714_10002192 Ga0065714_1000219285 520
161 3300005539 Ga0068853_100000545 Ga0068853_1000005456 520
162 3300009093 Ga0105240_10068355 Ga0105240_100683553 520
163 3300010375 Ga0105239_10011806 Ga0105239_100118066 520
164 3300013102 Ga0157371_10030112 Ga0157371_100301122 520
165 3300013105 Ga0157369_10018124 Ga0157369_100181243 520
166 3300013307 Ga0157372_10043147 Ga0157372_100431472 520
167 3300013307 Ga0157372_10054611 Ga0157372_100546114 520
168 3300021361 Ga0213872_10032175 Ga0213872_100321752 520
169 3300022467 Ga0224712_10023410 Ga0224712_100234101 520
170 3300030745 Ga0316182_1349497 Ga0316182_13494972 520
171 3300039447 Ga0436361_1107128 Ga0436361_1107128_6997_8559 520
172 3300044673 Ga0453683_0000149 Ga0453683_0000149_8300_9892 520
173 3300005435 Ga0070714_100114194 Ga0070714_1001141942 521
174 3300005437 Ga0070710_10032000 Ga0070710_100320002 521
175 3300005455 Ga0070663_100085842 Ga0070663_1000858422 521
176 3300005459 Ga0068867_100070187 Ga0068867_1000701872 521
177 3300005563 Ga0068855_100016896 Ga0068855_1000168965 521
178 3300005577 Ga0068857_100003754 Ga0068857_1000037547 521
179 3300005616 Ga0068852_100001189 Ga0068852_1000011895 521
180 3300006028 Ga0070717_10131643 Ga0070717_101316431 521
181 3300006175 Ga0070712_100019446 Ga0070712_1000194463 521
182 3300009093 Ga0105240_10021676 Ga0105240_100216765 521
183 3300009551 Ga0105238_10088223 Ga0105238_100882232 521
184 3300013102 Ga0157371_10003817 Ga0157371_100038176 521
185 3300013104 Ga0157370_10018622 Ga0157370_100186225 521
186 3300013104 Ga0157370_10047692 Ga0157370_100476922 521
187 3300013105 Ga0157369_10001882 Ga0157369_100018823 521
188 3300013307 Ga0157372_10000960 Ga0157372_1000096023 521
189 3300013307 Ga0157372_10001758 Ga0157372_1000175815 521
190 3300013307 Ga0157372_10098322 Ga0157372_100983222 521
191 3300020069 Ga0197907_10960244 Ga0197907_109602441 521
192 3300020070 Ga0206356_10319174 Ga0206356_103191741 521
193 3300020075 Ga0206349_1095916 Ga0206349_10959161 521
194 3300020082 Ga0206353_10322874 Ga0206353_103228742 521
195 3300021377 Ga0213874_10014130 Ga0213874_100141301 521
196 3300025898 Ga0207692_10027773 Ga0207692_100277732 521
197 3300025904 Ga0207647_10000480 Ga0207647_1000048032 521
198 3300025906 Ga0207699_10019478 Ga0207699_100194782 521
199 3300025913 Ga0207695_10032322 Ga0207695_100323223 521
200 3300025915 Ga0207693_10056147 Ga0207693_100561472 521
201 3300025949 Ga0207667_10000449 Ga0207667_1000044931 521
202 3300026089 Ga0207648_10082587 Ga0207648_100825872 521
203 3300026116 Ga0207674_10007385 Ga0207674_100073857 521
204 3300031548 Ga0307408_100000217 Ga0307408_10000021733 521
205 3300031548 Ga0307408_100000590 Ga0307408_10000059017 521
206 3300031616 Ga0307508_10000449 Ga0307508_100004496 521
207 3300031911 Ga0307412_10015734 Ga0307412_100157342 521
208 3300032002 Ga0307416_100024956 Ga0307416_1000249562 521
209 3300035111 Ga0373923_0009067 Ga0373923_0009067_577_2274 521
210 3300035117 Ga0373953_0007676 Ga0373953_0007676_78_1775 521
211 3300035119 Ga0373956_0011375 Ga0373956_0011375_1650_3347 521
212 3300037853 Ga0436364_0918101 Ga0436364_0918101_1708_3459 521
213 3300044684 Ga0466966_0007033 Ga0466966_0007033_5706_7307 521
214 3300044693 Ga0466961_0007233 Ga0466961_0007233_4228_5829 521
215 3300046463 Ga0495653_0041036 Ga0495653_0041036_503_2200 521
216 3300046559 Ga0495667_0045588 Ga0495667_0045588_102_1799 521
217 3300048922 Ga0496119_0026667 Ga0496119_0026667_741_2495 521
218 3300001990 JGI24737J22298_10000099 JGI24737J22298_1000009912 526
219 3300013306 Ga0163162_10007356 Ga0163162_100073568 526
220 3300046471 Ga0495650_0000216 Ga0495650_0000216_16801_18381 526

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16901

DAO_C

C-terminal domain of alpha-glycerophosphate oxidase

396

521

0.95

PF01266

DAO

FAD dependent oxidoreductase

23

384

0.81

PF00890

FAD_binding_2

FAD binding domain

23

257

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
5a9r-assembly1.cif.gz_A apo form of imine reductase from amycolatopsis orientalis 0.9433 21 51
8a3x-assembly1.cif.gz_B imine reductase from ensifer adhaerens in complex with nadp+ 0.9235 21 48
2y0d-assembly1.cif.gz_B bcec mutation y10k 0.9188 20 50
2y0d-assembly1.cif.gz_D bcec mutation y10k 0.9186 20 50
2y0d-assembly1.cif.gz_C bcec mutation y10k 0.918 20 50
ID Description Score Start End Superfamily
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9868 22 49 3.50.50.60
1mfzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9704 22 51 3.40.50.720
af_Q4DG35_95_220_1.10.8.870 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Alpha-glycerophosphate oxidase, cap domain 0.9693 423 519 1.10.8.870
3gg2D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9536 21 50 3.40.50.720
af_O97245_528_652_1.10.8.870 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Alpha-glycerophosphate oxidase, cap domain 0.9468 423 519 1.10.8.870
ID Description Score Start End GO Terms
AF-A0A1H8K4P8-F1-model_v4 Glycerol-3-phosphate dehydrogenase 0.993 1 526 GO:0004368
GO:0046168
AF-A0A415DS15-F1-model_v4 Glycerol-3-phosphate dehydrogenase/oxidase 0.9899 6 524 GO:0004368
GO:0046168
AF-A0A7K0HC59-F1-model_v4 deleted 0.9893 6 524
AF-A0A7I8MTI3-F1-model_v4 Aerobic glycerol-3-phosphate dehydrogenase (EC) (EC 1.1.5.3) 0.9891 5 523 GO:0004368
GO:0046168
AF-A0A357JG47-F1-model_v4 FAD-dependent oxidoreductase 0.989 1 523 GO:0004368
GO:0046168

Feature Viewer

pLDDT pTM Quality
89.75 0.91 High
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Predicted Structure (AlphaFold2)

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