F315553
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 206 | 163 | 187 | 347 |
Family's Representative Sequence
| Representative Sequence | 3300046558|Ga0495633_0001896|Ga0495633_0001896_13376_14476 |
| Length | 366 |
| Sequence | MLVEKNAPLQQYNTFGIMARSMNLVRVQSPQDIPDFLAQPPLGASRQVVVLGGGSNIVITGDVEPTVFKMEIMGKRLVEETDRHYIIEVGAGEVWHEVVAWSLAQGYPGLENLALIPGTAGAAPVQNIGAYGVELQDRFDSLDAIDLSNGQHFSLQAAQCAFGYRDSVFKHAPAETMPLTMIARATGVAEPRGMGLAGRAVITHVRLRLAKDWKPELGYLDLARKQAEKGIAHPSAQDIFDWVVEIRRAKLPDPAQIGNAGSFFKNPQVSADQCEDIIAREPKIVHYPMLDGSIKLAAGWMIDACGWRGKSIGKAGVYDRQALVLVNLGDGEGSVTGGEVVTLARAIQTSVYERFGIQLEPEPVVW |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2547132374 | Acidovorax radicis N35 | Isolate | Unclassified |
| 2 | 2643221570 | Acidovorax sp. Root568 | Isolate | Unclassified |
| 3 | 2643221596 | Acidovorax sp. Root70 | Isolate | Unclassified |
| 4 | 2643221609 | Acidovorax sp. Root217 | Isolate | Unclassified |
| 5 | 2643221611 | Acidovorax sp. Root219 | Isolate | Unclassified |
| 6 | 2643221652 | Acidovorax sp. Root402 | Isolate | Unclassified |
| 7 | 2643221717 | Acidovorax sp. Root267 | Isolate | Unclassified |
| 8 | 2721755523 | Delftia sp. HK171 | Isolate | Unclassified |
| 9 | 2738543012 | Acidovorax sp. CF301 | Isolate | Unclassified |
| 10 | 2816332133 | Acidovorax radicis 2721A | Isolate | Unclassified |
| 11 | 2839138175 | Delftia acidovorans B15 | Isolate | Rhizosphere |
| 12 | 2842718218 | Acidovorax sp. R-73343 | Isolate | Unclassified |
| 13 | 2894023352 | Diaphorobacter ruginosibacter DSM 27467 | Isolate | Nodule |
| 14 | 2904541872 | Variovorax sp. 1615 | Isolate | Rhizosphere |
| 15 | 2929160207 | Variovorax sp. R-72349 Hybrid assembly | Isolate | Unclassified |
| 16 | 2932422444 | Comamonas sp. 4034 | Isolate | Rhizosphere |
| 17 | 2939631187 | Ottowia thiooxydans 2709 | Isolate | Rhizosphere |
| 18 | 2974320154 | Acidovorax wautersii SORGH_AS 335 | Isolate | Unclassified |
| 19 | 2990710928 | Acidovorax delafieldii SLBN-75 | Isolate | Rhizosphere |
| 20 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 21 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 22 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 23 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 24 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 25 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 26 | 3300003756 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 | Metagenome | Endosphere |
| 27 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 28 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 29 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 30 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 31 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 33 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 38 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 40 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 41 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 42 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 43 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 44 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 45 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 46 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 47 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 48 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 49 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 50 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 51 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 52 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 69 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 70 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 71 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 72 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 73 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 74 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 75 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 76 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 77 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 78 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 100 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 101 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 102 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 103 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 104 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 105 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 106 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 107 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 108 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 109 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 110 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 111 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 112 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 113 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 114 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 115 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 116 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 117 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 118 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 119 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 120 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 121 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 122 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 123 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 124 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 125 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 126 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 127 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 128 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 129 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 130 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 131 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 132 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 133 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 134 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 135 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 136 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 137 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 138 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 140 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 141 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 142 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 144 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 145 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 146 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 147 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 148 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 149 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 150 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 151 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 152 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 153 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 154 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 155 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 156 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 157 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 158 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 159 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 160 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 161 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 162 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 163 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.78 |
| Metatranscriptomes | 0 |
| Isolates | 9.22 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 12.62 |
| Nodule | 1.46 |
| Rhizoplane | 2.43 |
| Rhizosphere | 66.5 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 16.99 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25156J39149_1000157 | 3300002705 | Bacteria | 49961 |
| 2 | JGI25154J39366_1000959 | 3300002738 | Bacteria | 11885 |
| 3 | JGI25157J39369_1000114 | 3300002741 | Bacteria | 68725 |
| 4 | JGI25157J39369_1000232 | 3300002741 | Bacteria | 43715 |
| 5 | JGI25151J46595_10002241 | 3300003187 | Bacteria | 11884 |
| 6 | rootH2_10004656 | 3300003320 | Bacteria | 11378 |
| 7 | Ga0055539_1000274 | 3300003752 | Bacteria | 30379 |
| 8 | Ga0055533_1000024 | 3300003756 | Bacteria | 338067 |
| 9 | Ga0055535_1000156 | 3300003761 | Bacteria | 72919 |
| 10 | Ga0055529_1000091 | 3300003763 | Bacteria | 138369 |
| 11 | Ga0055540_1013111 | 3300003792 | Bacteria | 2553 |
| 12 | Ga0065707_10087025 | 3300005295 | Bacteria | 5200 |
| 13 | Ga0070658_10378217 | 3300005327 | Bacteria | 1214 |
| 14 | Ga0068869_100021352 | 3300005334 | Bacteria | 4453 |
| 15 | Ga0070668_100061180 | 3300005347 | Bacteria | 2917 |
| 16 | Ga0070669_100022674 | 3300005353 | Bacteria | 4491 |
| 17 | Ga0070673_100051278 | 3300005364 | Bacteria | 3230 |
| 18 | Ga0070659_100216738 | 3300005366 | Bacteria | 1579 |
| 19 | Ga0070678_100048253 | 3300005456 | Bacteria | 3065 |
| 20 | Ga0070662_100014058 | 3300005457 | Bacteria | 5337 |
| 21 | Ga0070686_100092903 | 3300005544 | Bacteria | 2022 |
| 22 | Ga0068855_100302739 | 3300005563 | Bacteria | 1770 |
| 23 | Ga0068857_100000916 | 3300005577 | Bacteria | 22273 |
| 24 | Ga0068854_100005376 | 3300005578 | Bacteria | 8082 |
| 25 | Ga0068856_100002337 | 3300005614 | Bacteria | 19512 |
| 26 | Ga0068866_10007569 | 3300005718 | Bacteria | 4552 |
| 27 | Ga0068861_100062096 | 3300005719 | Bacteria | 2869 |
| 28 | Ga0068861_100144384 | 3300005719 | Bacteria | 1946 |
| 29 | Ga0068860_100000968 | 3300005843 | Bacteria | 31798 |
| 30 | Ga0068860_100104740 | 3300005843 | Bacteria | 2701 |
| 31 | Ga0068862_100005951 | 3300005844 | Bacteria | 10158 |
| 32 | Ga0068862_100017110 | 3300005844 | Bacteria | 6032 |
| 33 | Ga0075366_10013579 | 3300006195 | Bacteria | 4641 |
| 34 | Ga0075366_10045467 | 3300006195 | Bacteria | 2602 |
| 35 | Ga0075370_10006657 | 3300006353 | Bacteria | 5828 |
| 36 | Ga0068865_100003987 | 3300006881 | Bacteria | 8857 |
| 37 | Ga0079104_1000025 | 3300006946 | Bacteria | 218785 |
| 38 | Ga0105240_10121681 | 3300009093 | Bacteria | 3142 |
| 39 | Ga0105240_10405530 | 3300009093 | Bacteria | 1534 |
| 40 | Ga0111539_10244821 | 3300009094 | Bacteria | 2087 |
| 41 | Ga0105243_10002660 | 3300009148 | Bacteria | 14842 |
| 42 | Ga0105243_10425666 | 3300009148 | Bacteria | 1239 |
| 43 | Ga0105237_10099248 | 3300009545 | Bacteria | 2903 |
| 44 | Ga0105238_10055186 | 3300009551 | Bacteria | 3989 |
| 45 | Ga0105249_10509194 | 3300009553 | Bacteria | 1250 |
| 46 | Ga0105239_10363702 | 3300010375 | Bacteria | 1634 |
| 47 | Ga0105246_10022454 | 3300011119 | Bacteria | 4071 |
| 48 | Ga0157372_10065396 | 3300013307 | Bacteria | 4083 |
| 49 | Ga0157375_10267735 | 3300013308 | Bacteria | 1870 |
| 50 | Ga0163163_10255204 | 3300014325 | Bacteria | 1804 |
| 51 | Ga0157380_10067493 | 3300014326 | Bacteria | 2880 |
| 52 | Ga0157379_10024315 | 3300014968 | Bacteria | 5378 |
| 53 | Ga0157379_10057939 | 3300014968 | Bacteria | 3462 |
| 54 | Ga0157379_10326527 | 3300014968 | Bacteria | 1401 |
| 55 | Ga0163161_10053884 | 3300017792 | Bacteria | 2918 |
| 56 | Ga0209674_100007 | 3300025226 | Bacteria | 1077082 |
| 57 | Ga0209563_100060 | 3300025230 | Bacteria | 284876 |
| 58 | Ga0207427_100806 | 3300025231 | Bacteria | 14184 |
| 59 | Ga0209258_100177 | 3300025242 | Bacteria | 140714 |
| 60 | Ga0209258_100926 | 3300025242 | Bacteria | 14558 |
| 61 | Ga0209646_1000056 | 3300025246 | Bacteria | 269860 |
| 62 | Ga0209026_1000009 | 3300025250 | Bacteria | 531812 |
| 63 | Ga0209677_100088 | 3300025253 | Bacteria | 108817 |
| 64 | Ga0209677_100112 | 3300025253 | Bacteria | 85460 |
| 65 | Ga0209677_102553 | 3300025253 | Bacteria | 6721 |
| 66 | Ga0209148_1002802 | 3300025254 | Bacteria | 5424 |
| 67 | Ga0209759_1000035 | 3300025256 | Bacteria | 264254 |
| 68 | Ga0209759_1000820 | 3300025256 | Bacteria | 24632 |
| 69 | Ga0209759_1000868 | 3300025256 | Bacteria | 23242 |
| 70 | Ga0209759_1002512 | 3300025256 | Bacteria | 7996 |
| 71 | Ga0209759_1013698 | 3300025256 | Bacteria | 2179 |
| 72 | Ga0209455_1000108 | 3300025272 | Bacteria | 193021 |
| 73 | Ga0209025_1000641 | 3300025294 | Bacteria | 61686 |
| 74 | Ga0209051_1001147 | 3300025303 | Bacteria | 24118 |
| 75 | Ga0209051_1002467 | 3300025303 | Bacteria | 13226 |
| 76 | Ga0207642_10012502 | 3300025899 | Bacteria | 3066 |
| 77 | Ga0207705_10059645 | 3300025909 | Bacteria | 2754 |
| 78 | Ga0207654_10082636 | 3300025911 | Bacteria | 1937 |
| 79 | Ga0207695_10028386 | 3300025913 | Bacteria | 6207 |
| 80 | Ga0207695_10104400 | 3300025913 | Bacteria | 2823 |
| 81 | Ga0207681_10035764 | 3300025923 | Bacteria | 3274 |
| 82 | Ga0207694_10013375 | 3300025924 | Bacteria | 6181 |
| 83 | Ga0207690_10008610 | 3300025932 | Bacteria | 6050 |
| 84 | Ga0207706_10008473 | 3300025933 | Bacteria | 9483 |
| 85 | Ga0207686_10288072 | 3300025934 | Bacteria | 1215 |
| 86 | Ga0207709_10000459 | 3300025935 | Bacteria | 37691 |
| 87 | Ga0207709_10276922 | 3300025935 | Bacteria | 1237 |
| 88 | Ga0207704_10005679 | 3300025938 | Bacteria | 5767 |
| 89 | Ga0207689_10016366 | 3300025942 | Bacteria | 6280 |
| 90 | Ga0207667_10080345 | 3300025949 | Bacteria | 3378 |
| 91 | Ga0207651_10035821 | 3300025960 | Bacteria | 3232 |
| 92 | Ga0207668_10101121 | 3300025972 | Bacteria | 2142 |
| 93 | Ga0207640_10028604 | 3300025981 | Bacteria | 3410 |
| 94 | Ga0207702_10000501 | 3300026078 | Bacteria | 44092 |
| 95 | Ga0207648_10000789 | 3300026089 | Bacteria | 35679 |
| 96 | Ga0207674_10227618 | 3300026116 | Bacteria | 1813 |
| 97 | Ga0207675_100187880 | 3300026118 | Bacteria | 1981 |
| 98 | Ga0207683_10068976 | 3300026121 | Bacteria | 3123 |
| 99 | Ga0209281_1000007 | 3300027111 | Bacteria | 938265 |
| 100 | Ga0209974_10001900 | 3300027876 | Bacteria | 7627 |
| 101 | Ga0209974_10025753 | 3300027876 | Bacteria | 1947 |
| 102 | Ga0268264_10068705 | 3300028381 | Bacteria | 2995 |
| 103 | Ga0268264_10094978 | 3300028381 | Bacteria | 2579 |
| 104 | Ga0265318_10058870 | 3300028577 | Bacteria | 1433 |
| 105 | Ga0265336_10000039 | 3300028666 | Bacteria | 149376 |
| 106 | Ga0307515_10000026 | 3300028794 | Bacteria | 382411 |
| 107 | Ga0307515_10000132 | 3300028794 | Bacteria | 176547 |
| 108 | Ga0265324_10003205 | 3300029957 | Bacteria | 7914 |
| 109 | Ga0265330_10000108 | 3300031235 | Bacteria | 69468 |
| 110 | Ga0265332_10000072 | 3300031238 | Bacteria | 86029 |
| 111 | Ga0265328_10026822 | 3300031239 | Bacteria | 2164 |
| 112 | Ga0265328_10033932 | 3300031239 | Bacteria | 1890 |
| 113 | Ga0265327_10000210 | 3300031251 | Bacteria | 122385 |
| 114 | Ga0265316_10000005 | 3300031344 | Bacteria | 304442 |
| 115 | Ga0265316_10132346 | 3300031344 | Bacteria | 1878 |
| 116 | Ga0307513_10000004 | 3300031456 | Bacteria | 558931 |
| 117 | Ga0307513_10016875 | 3300031456 | Bacteria | 8782 |
| 118 | Ga0307408_100000213 | 3300031548 | Bacteria | 61855 |
| 119 | Ga0265314_10000874 | 3300031711 | Bacteria | 35850 |
| 120 | Ga0265314_10007347 | 3300031711 | Bacteria | 9565 |
| 121 | Ga0307516_10016377 | 3300031730 | Bacteria | 7754 |
| 122 | Ga0307516_10022929 | 3300031730 | Bacteria | 6406 |
| 123 | Ga0307410_10086555 | 3300031852 | Bacteria | 2214 |
| 124 | Ga0307406_10004684 | 3300031901 | Bacteria | 7454 |
| 125 | Ga0373927_0053734 | 3300035695 | Bacteria | 2606 |
| 126 | Ga0373925_0004799 | 3300037068 | Bacteria | 10180 |
| 127 | Ga0395898_0001654 | 3300037466 | Bacteria | 30082 |
| 128 | Ga0395898_0006486 | 3300037466 | Bacteria | 12497 |
| 129 | Ga0395898_0092344 | 3300037466 | Bacteria | 2911 |
| 130 | Ga0395905_0001002 | 3300037471 | Bacteria | 36131 |
| 131 | Ga0395905_0062687 | 3300037471 | Bacteria | 3477 |
| 132 | Ga0395901_0003254 | 3300038443 | Bacteria | 16337 |
| 133 | Ga0436361_0348943 | 3300039447 | Bacteria | 40158 |
| 134 | Ga0451577_0018315 | 3300042876 | Bacteria | 6453 |
| 135 | Ga0451577_0022413 | 3300042876 | Bacteria | 5767 |
| 136 | Ga0451577_0041346 | 3300042876 | Bacteria | 4137 |
| 137 | Ga0451577_0131060 | 3300042876 | Bacteria | 2249 |
| 138 | Ga0466969_0023886 | 3300044656 | Bacteria | 3146 |
| 139 | Ga0466972_0000390 | 3300044658 | Bacteria | 23451 |
| 140 | Ga0466972_0116951 | 3300044658 | Bacteria | 1258 |
| 141 | Ga0453683_0004841 | 3300044673 | Bacteria | 9472 |
| 142 | Ga0466965_0011132 | 3300044683 | Bacteria | 4209 |
| 143 | Ga0466966_0002135 | 3300044684 | Bacteria | 12815 |
| 144 | Ga0466964_0028444 | 3300044706 | Bacteria | 2202 |
| 145 | Ga0453684_0019186 | 3300044712 | Bacteria | 10426 |
| 146 | Ga0453684_0179252 | 3300044712 | Bacteria | 2489 |
| 147 | Ga0453684_0418753 | 3300044712 | Bacteria | 1497 |
| 148 | Ga0466971_0078664 | 3300044719 | Bacteria | 1502 |
| 149 | Ga0466968_0022305 | 3300044735 | Bacteria | 2573 |
| 150 | Ga0466968_0027888 | 3300044735 | Bacteria | 2326 |
| 151 | Ga0466970_0024507 | 3300044765 | Bacteria | 3155 |
| 152 | Ga0466957_0024740 | 3300044842 | Bacteria | 3555 |
| 153 | Ga0451576_0002187 | 3300045051 | Bacteria | 30196 |
| 154 | Ga0451576_0029774 | 3300045051 | Bacteria | 5840 |
| 155 | Ga0451576_0235484 | 3300045051 | Bacteria | 1912 |
| 156 | Ga0466958_0110891 | 3300045836 | Bacteria | 1712 |
| 157 | Ga0466967_0335302 | 3300045976 | Bacteria | 1461 |
| 158 | Ga0495590_0000937 | 3300046457 | Bacteria | 12934 |
| 159 | Ga0495650_0003964 | 3300046471 | Bacteria | 10407 |
| 160 | Ga0495650_0024446 | 3300046471 | Bacteria | 2852 |
| 161 | Ga0495639_0054782 | 3300046475 | Bacteria | 1818 |
| 162 | Ga0495585_0061658 | 3300046492 | Bacteria | 2061 |
| 163 | Ga0495583_0000062 | 3300046506 | Bacteria | 195151 |
| 164 | Ga0495606_0013984 | 3300046507 | Bacteria | 6294 |
| 165 | Ga0495628_0117280 | 3300046516 | Bacteria | 2044 |
| 166 | Ga0495654_0002265 | 3300046530 | Bacteria | 12449 |
| 167 | Ga0495633_0001896 | 3300046558 | Bacteria | 15246 |
| 168 | Ga0495669_0014036 | 3300046684 | Bacteria | 3423 |
| 169 | Ga0495649_0001480 | 3300046694 | Bacteria | 17637 |
| 170 | Ga0495686_0000038 | 3300047472 | Bacteria | 306383 |
| 171 | Ga0496104_0197133 | 3300048907 | Bacteria | 1925 |
| 172 | Ga0496105_0150919 | 3300048908 | Bacteria | 1910 |
| 173 | Ga0496109_0033778 | 3300048912 | Bacteria | 4604 |
| 174 | Ga0496109_0083038 | 3300048912 | Bacteria | 2954 |
| 175 | Ga0496115_0093285 | 3300048918 | Bacteria | 2462 |
| 176 | Ga0496121_0020827 | 3300048924 | Bacteria | 6462 |
| 177 | Ga0496121_0131623 | 3300048924 | Bacteria | 1871 |
| 178 | Ga0496124_0000622 | 3300048927 | Bacteria | 59383 |
| 179 | Ga0496125_0076503 | 3300048928 | Bacteria | 2584 |
| 180 | Ga0501031_0007764 | 3300049568 | Bacteria | 6982 |
| 181 | Ga0501079_0239585 | 3300049741 | Bacteria | 1417 |
| 182 | Ga0501035_0168151 | 3300049822 | Bacteria | 1895 |
| 183 | nmdc:mga0k408_11403_c1 | 3300050493 | Bacteria | 4839 |
| 184 | nmdc:mga0k408_3857_c1 | 3300050493 | Bacteria | 7947 |
| 185 | Ga0500635_0000232 | 3300053080 | Bacteria | 24594 |
| 186 | Ga0500608_059260 | 3300053122 | Bacteria | 1832 |
| 187 | Ga0466962_0015962 | 3300061719 | Bacteria | 3623 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005366 | Ga0070659_100216738 | Ga0070659_1002167381 | 322 |
| 2 | 3300031852 | Ga0307410_10086555 | Ga0307410_100865552 | 332 |
| 3 | 3300049741 | Ga0501079_0239585 | Ga0501079_0239585_18_1067 | 333 |
| 4 | iso_pu_bacteria | 2547132374 | 2548501116 | 334 |
| 5 | iso_pu_bacteria | 2643221570 | 2643866821 | 334 |
| 6 | iso_pu_bacteria | 2643221596 | 2643993541 | 334 |
| 7 | iso_pu_bacteria | 2643221609 | 2644061126 | 334 |
| 8 | iso_pu_bacteria | 2643221611 | 2644071836 | 334 |
| 9 | iso_pu_bacteria | 2643221652 | 2644294675 | 334 |
| 10 | iso_pu_bacteria | 2643221717 | 2644645786 | 334 |
| 11 | iso_pu_bacteria | 2721755523 | 2722882733 | 334 |
| 12 | iso_pu_bacteria | 2738543012 | 2739243467 | 334 |
| 13 | iso_pu_bacteria | 2816332133 | 2816475741 | 334 |
| 14 | iso_pu_bacteria | 2839138175 | 2839138316 | 334 |
| 15 | iso_pu_bacteria | 2842718218 | 2842719791 | 334 |
| 16 | iso_pu_bacteria | 2894023352 | 2894026057 | 334 |
| 17 | iso_pu_bacteria | 2904541872 | 2904549449 | 334 |
| 18 | iso_pu_bacteria | 2929160207 | 2929164818 | 334 |
| 19 | iso_pu_bacteria | 2932422444 | 2932426210 | 334 |
| 20 | iso_pu_bacteria | 2939631187 | 2939632951 | 334 |
| 21 | iso_pu_bacteria | 2974320154 | 2974323868 | 334 |
| 22 | iso_pu_bacteria | 2990710928 | 2990712777 | 334 |
| 23 | 3300003187 | JGI25151J46595_10002241 | JGI25151J46595_1000224114 | 338 |
| 24 | 3300006946 | Ga0079104_1000025 | Ga0079104_1000025183 | 338 |
| 25 | 3300009148 | Ga0105243_10002660 | Ga0105243_100026602 | 338 |
| 26 | 3300025294 | Ga0209025_1000641 | Ga0209025_100064120 | 338 |
| 27 | 3300025935 | Ga0207709_10000459 | Ga0207709_1000045929 | 338 |
| 28 | 3300027111 | Ga0209281_1000007 | Ga0209281_100000739 | 338 |
| 29 | 3300027876 | Ga0209974_10001900 | Ga0209974_100019009 | 338 |
| 30 | 3300028577 | Ga0265318_10058870 | Ga0265318_100588701 | 338 |
| 31 | 3300031235 | Ga0265330_10000108 | Ga0265330_1000010828 | 338 |
| 32 | 3300031238 | Ga0265332_10000072 | Ga0265332_1000007228 | 338 |
| 33 | 3300031344 | Ga0265316_10132346 | Ga0265316_101323462 | 338 |
| 34 | 3300031456 | Ga0307513_10000004 | Ga0307513_10000004147 | 338 |
| 35 | 3300031548 | Ga0307408_100000213 | Ga0307408_10000021319 | 338 |
| 36 | 3300031711 | Ga0265314_10000874 | Ga0265314_1000087414 | 338 |
| 37 | 3300031711 | Ga0265314_10007347 | Ga0265314_100073475 | 338 |
| 38 | 3300031901 | Ga0307406_10004684 | Ga0307406_100046842 | 338 |
| 39 | 3300037466 | Ga0395898_0092344 | Ga0395898_0092344_1372_2433 | 338 |
| 40 | 3300037471 | Ga0395905_0001002 | Ga0395905_0001002_1133_2149 | 338 |
| 41 | 3300037471 | Ga0395905_0062687 | Ga0395905_0062687_1376_2416 | 338 |
| 42 | 3300039447 | Ga0436361_0348943 | Ga0436361_0348943_33357_34430 | 338 |
| 43 | 3300042876 | Ga0451577_0018315 | Ga0451577_0018315_4826_5899 | 338 |
| 44 | 3300042876 | Ga0451577_0131060 | Ga0451577_0131060_555_1628 | 338 |
| 45 | 3300044673 | Ga0453683_0004841 | Ga0453683_0004841_3365_4438 | 338 |
| 46 | 3300044712 | Ga0453684_0019186 | Ga0453684_0019186_1313_2386 | 338 |
| 47 | 3300044712 | Ga0453684_0179252 | Ga0453684_0179252_537_1610 | 338 |
| 48 | 3300045051 | Ga0451576_0029774 | Ga0451576_0029774_3954_5027 | 338 |
| 49 | 3300045051 | Ga0451576_0235484 | Ga0451576_0235484_467_1540 | 338 |
| 50 | 3300046530 | Ga0495654_0002265 | Ga0495654_0002265_4940_5980 | 338 |
| 51 | 3300046558 | Ga0495633_0001896 | Ga0495633_0001896_13376_14476 | 338 |
| 52 | 3300048924 | Ga0496121_0131623 | Ga0496121_0131623_38_1126 | 338 |
| 53 | 3300049568 | Ga0501031_0007764 | Ga0501031_0007764_3045_4127 | 338 |
| 54 | 3300031730 | Ga0307516_10016377 | Ga0307516_100163778 | 339 |
| 55 | 3300046516 | Ga0495628_0117280 | Ga0495628_0117280_933_1952 | 339 |
| 56 | 3300047472 | Ga0495686_0000038 | Ga0495686_0000038_171027_172046 | 339 |
| 57 | 3300002705 | JGI25156J39149_1000157 | JGI25156J39149_100015717 | 342 |
| 58 | 3300002738 | JGI25154J39366_1000959 | JGI25154J39366_10009593 | 342 |
| 59 | 3300002741 | JGI25157J39369_1000114 | JGI25157J39369_100011432 | 342 |
| 60 | 3300002741 | JGI25157J39369_1000232 | JGI25157J39369_100023233 | 342 |
| 61 | 3300003320 | rootH2_10004656 | rootH2_1000465610 | 342 |
| 62 | 3300003752 | Ga0055539_1000274 | Ga0055539_10002741 | 342 |
| 63 | 3300003756 | Ga0055533_1000024 | Ga0055533_1000024147 | 342 |
| 64 | 3300003761 | Ga0055535_1000156 | Ga0055535_100015644 | 342 |
| 65 | 3300003763 | Ga0055529_1000091 | Ga0055529_1000091115 | 342 |
| 66 | 3300003792 | Ga0055540_1013111 | Ga0055540_10131113 | 342 |
| 67 | 3300005295 | Ga0065707_10087025 | Ga0065707_100870252 | 342 |
| 68 | 3300005327 | Ga0070658_10378217 | Ga0070658_103782171 | 342 |
| 69 | 3300005334 | Ga0068869_100021352 | Ga0068869_1000213524 | 342 |
| 70 | 3300005347 | Ga0070668_100061180 | Ga0070668_1000611803 | 342 |
| 71 | 3300005353 | Ga0070669_100022674 | Ga0070669_1000226744 | 342 |
| 72 | 3300005364 | Ga0070673_100051278 | Ga0070673_1000512783 | 342 |
| 73 | 3300005456 | Ga0070678_100048253 | Ga0070678_1000482534 | 342 |
| 74 | 3300005457 | Ga0070662_100014058 | Ga0070662_1000140582 | 342 |
| 75 | 3300005544 | Ga0070686_100092903 | Ga0070686_1000929033 | 342 |
| 76 | 3300005563 | Ga0068855_100302739 | Ga0068855_1003027392 | 342 |
| 77 | 3300005577 | Ga0068857_100000916 | Ga0068857_10000091619 | 342 |
| 78 | 3300005578 | Ga0068854_100005376 | Ga0068854_1000053764 | 342 |
| 79 | 3300005614 | Ga0068856_100002337 | Ga0068856_1000023374 | 342 |
| 80 | 3300005718 | Ga0068866_10007569 | Ga0068866_100075695 | 342 |
| 81 | 3300005719 | Ga0068861_100062096 | Ga0068861_1000620963 | 342 |
| 82 | 3300005719 | Ga0068861_100144384 | Ga0068861_1001443842 | 342 |
| 83 | 3300005843 | Ga0068860_100000968 | Ga0068860_1000009685 | 342 |
| 84 | 3300005843 | Ga0068860_100104740 | Ga0068860_1001047403 | 342 |
| 85 | 3300005844 | Ga0068862_100005951 | Ga0068862_1000059518 | 342 |
| 86 | 3300005844 | Ga0068862_100017110 | Ga0068862_1000171105 | 342 |
| 87 | 3300006195 | Ga0075366_10013579 | Ga0075366_100135792 | 342 |
| 88 | 3300006195 | Ga0075366_10045467 | Ga0075366_100454672 | 342 |
| 89 | 3300006353 | Ga0075370_10006657 | Ga0075370_100066572 | 342 |
| 90 | 3300006881 | Ga0068865_100003987 | Ga0068865_1000039874 | 342 |
| 91 | 3300009093 | Ga0105240_10121681 | Ga0105240_101216813 | 342 |
| 92 | 3300009093 | Ga0105240_10405530 | Ga0105240_104055302 | 342 |
| 93 | 3300009094 | Ga0111539_10244821 | Ga0111539_102448213 | 342 |
| 94 | 3300009148 | Ga0105243_10425666 | Ga0105243_104256661 | 342 |
| 95 | 3300009545 | Ga0105237_10099248 | Ga0105237_100992482 | 342 |
| 96 | 3300009551 | Ga0105238_10055186 | Ga0105238_100551864 | 342 |
| 97 | 3300009553 | Ga0105249_10509194 | Ga0105249_105091942 | 342 |
| 98 | 3300010375 | Ga0105239_10363702 | Ga0105239_103637023 | 342 |
| 99 | 3300011119 | Ga0105246_10022454 | Ga0105246_100224544 | 342 |
| 100 | 3300013307 | Ga0157372_10065396 | Ga0157372_100653961 | 342 |
| 101 | 3300013308 | Ga0157375_10267735 | Ga0157375_102677352 | 342 |
| 102 | 3300014325 | Ga0163163_10255204 | Ga0163163_102552042 | 342 |
| 103 | 3300014326 | Ga0157380_10067493 | Ga0157380_100674932 | 342 |
| 104 | 3300014968 | Ga0157379_10024315 | Ga0157379_100243155 | 342 |
| 105 | 3300014968 | Ga0157379_10057939 | Ga0157379_100579392 | 342 |
| 106 | 3300014968 | Ga0157379_10326527 | Ga0157379_103265272 | 342 |
| 107 | 3300017792 | Ga0163161_10053884 | Ga0163161_100538841 | 342 |
| 108 | 3300025226 | Ga0209674_100007 | Ga0209674_100007191 | 342 |
| 109 | 3300025230 | Ga0209563_100060 | Ga0209563_10006077 | 342 |
| 110 | 3300025231 | Ga0207427_100806 | Ga0207427_1008068 | 342 |
| 111 | 3300025242 | Ga0209258_100177 | Ga0209258_10017718 | 342 |
| 112 | 3300025242 | Ga0209258_100926 | Ga0209258_1009263 | 342 |
| 113 | 3300025246 | Ga0209646_1000056 | Ga0209646_100005623 | 342 |
| 114 | 3300025250 | Ga0209026_1000009 | Ga0209026_1000009223 | 342 |
| 115 | 3300025253 | Ga0209677_100088 | Ga0209677_10008861 | 342 |
| 116 | 3300025253 | Ga0209677_100112 | Ga0209677_10011220 | 342 |
| 117 | 3300025253 | Ga0209677_102553 | Ga0209677_1025535 | 342 |
| 118 | 3300025254 | Ga0209148_1002802 | Ga0209148_10028022 | 342 |
| 119 | 3300025256 | Ga0209759_1000035 | Ga0209759_1000035240 | 342 |
| 120 | 3300025256 | Ga0209759_1000820 | Ga0209759_10008202 | 342 |
| 121 | 3300025256 | Ga0209759_1000868 | Ga0209759_10008681 | 342 |
| 122 | 3300025256 | Ga0209759_1002512 | Ga0209759_10025123 | 342 |
| 123 | 3300025256 | Ga0209759_1013698 | Ga0209759_10136982 | 342 |
| 124 | 3300025272 | Ga0209455_1000108 | Ga0209455_1000108114 | 342 |
| 125 | 3300025303 | Ga0209051_1001147 | Ga0209051_10011477 | 342 |
| 126 | 3300025303 | Ga0209051_1002467 | Ga0209051_100246710 | 342 |
| 127 | 3300025899 | Ga0207642_10012502 | Ga0207642_100125023 | 342 |
| 128 | 3300025909 | Ga0207705_10059645 | Ga0207705_100596453 | 342 |
| 129 | 3300025911 | Ga0207654_10082636 | Ga0207654_100826362 | 342 |
| 130 | 3300025913 | Ga0207695_10028386 | Ga0207695_100283862 | 342 |
| 131 | 3300025913 | Ga0207695_10104400 | Ga0207695_101044003 | 342 |
| 132 | 3300025923 | Ga0207681_10035764 | Ga0207681_100357643 | 342 |
| 133 | 3300025924 | Ga0207694_10013375 | Ga0207694_100133754 | 342 |
| 134 | 3300025932 | Ga0207690_10008610 | Ga0207690_100086106 | 342 |
| 135 | 3300025933 | Ga0207706_10008473 | Ga0207706_100084735 | 342 |
| 136 | 3300025934 | Ga0207686_10288072 | Ga0207686_102880721 | 342 |
| 137 | 3300025935 | Ga0207709_10276922 | Ga0207709_102769221 | 342 |
| 138 | 3300025938 | Ga0207704_10005679 | Ga0207704_100056794 | 342 |
| 139 | 3300025942 | Ga0207689_10016366 | Ga0207689_100163664 | 342 |
| 140 | 3300025949 | Ga0207667_10080345 | Ga0207667_100803452 | 342 |
| 141 | 3300025960 | Ga0207651_10035821 | Ga0207651_100358213 | 342 |
| 142 | 3300025972 | Ga0207668_10101121 | Ga0207668_101011212 | 342 |
| 143 | 3300025981 | Ga0207640_10028604 | Ga0207640_100286044 | 342 |
| 144 | 3300026078 | Ga0207702_10000501 | Ga0207702_1000050128 | 342 |
| 145 | 3300026089 | Ga0207648_10000789 | Ga0207648_1000078922 | 342 |
| 146 | 3300026116 | Ga0207674_10227618 | Ga0207674_102276182 | 342 |
| 147 | 3300026118 | Ga0207675_100187880 | Ga0207675_1001878802 | 342 |
| 148 | 3300026121 | Ga0207683_10068976 | Ga0207683_100689762 | 342 |
| 149 | 3300027876 | Ga0209974_10025753 | Ga0209974_100257533 | 342 |
| 150 | 3300028381 | Ga0268264_10068705 | Ga0268264_100687052 | 342 |
| 151 | 3300028381 | Ga0268264_10094978 | Ga0268264_100949782 | 342 |
| 152 | 3300028666 | Ga0265336_10000039 | Ga0265336_100000397 | 342 |
| 153 | 3300028794 | Ga0307515_10000026 | Ga0307515_1000002636 | 342 |
| 154 | 3300028794 | Ga0307515_10000132 | Ga0307515_10000132119 | 342 |
| 155 | 3300029957 | Ga0265324_10003205 | Ga0265324_100032054 | 342 |
| 156 | 3300031239 | Ga0265328_10026822 | Ga0265328_100268223 | 342 |
| 157 | 3300031239 | Ga0265328_10033932 | Ga0265328_100339322 | 342 |
| 158 | 3300031251 | Ga0265327_10000210 | Ga0265327_1000021028 | 342 |
| 159 | 3300031344 | Ga0265316_10000005 | Ga0265316_10000005181 | 342 |
| 160 | 3300031456 | Ga0307513_10016875 | Ga0307513_100168751 | 342 |
| 161 | 3300031730 | Ga0307516_10022929 | Ga0307516_100229293 | 342 |
| 162 | 3300035695 | Ga0373927_0053734 | Ga0373927_0053734_855_1904 | 342 |
| 163 | 3300037068 | Ga0373925_0004799 | Ga0373925_0004799_1294_2343 | 342 |
| 164 | 3300037466 | Ga0395898_0001654 | Ga0395898_0001654_26784_27812 | 342 |
| 165 | 3300037466 | Ga0395898_0006486 | Ga0395898_0006486_2609_3637 | 342 |
| 166 | 3300038443 | Ga0395901_0003254 | Ga0395901_0003254_10829_11857 | 342 |
| 167 | 3300042876 | Ga0451577_0022413 | Ga0451577_0022413_3574_4671 | 342 |
| 168 | 3300042876 | Ga0451577_0041346 | Ga0451577_0041346_1900_2949 | 342 |
| 169 | 3300044656 | Ga0466969_0023886 | Ga0466969_0023886_260_1288 | 342 |
| 170 | 3300044658 | Ga0466972_0000390 | Ga0466972_0000390_564_1592 | 342 |
| 171 | 3300044658 | Ga0466972_0116951 | Ga0466972_0116951_98_1126 | 342 |
| 172 | 3300044683 | Ga0466965_0011132 | Ga0466965_0011132_3096_4124 | 342 |
| 173 | 3300044684 | Ga0466966_0002135 | Ga0466966_0002135_845_1873 | 342 |
| 174 | 3300044706 | Ga0466964_0028444 | Ga0466964_0028444_989_2017 | 342 |
| 175 | 3300044712 | Ga0453684_0418753 | Ga0453684_0418753_108_1181 | 342 |
| 176 | 3300044719 | Ga0466971_0078664 | Ga0466971_0078664_265_1293 | 342 |
| 177 | 3300044735 | Ga0466968_0022305 | Ga0466968_0022305_1429_2457 | 342 |
| 178 | 3300044735 | Ga0466968_0027888 | Ga0466968_0027888_721_1749 | 342 |
| 179 | 3300044765 | Ga0466970_0024507 | Ga0466970_0024507_1105_2133 | 342 |
| 180 | 3300044842 | Ga0466957_0024740 | Ga0466957_0024740_1518_2546 | 342 |
| 181 | 3300045051 | Ga0451576_0002187 | Ga0451576_0002187_13879_14916 | 342 |
| 182 | 3300045836 | Ga0466958_0110891 | Ga0466958_0110891_302_1330 | 342 |
| 183 | 3300045976 | Ga0466967_0335302 | Ga0466967_0335302_52_1080 | 342 |
| 184 | 3300046457 | Ga0495590_0000937 | Ga0495590_0000937_8141_9181 | 342 |
| 185 | 3300046471 | Ga0495650_0003964 | Ga0495650_0003964_4934_5983 | 342 |
| 186 | 3300046471 | Ga0495650_0024446 | Ga0495650_0024446_1545_2573 | 342 |
| 187 | 3300046475 | Ga0495639_0054782 | Ga0495639_0054782_94_1122 | 342 |
| 188 | 3300046492 | Ga0495585_0061658 | Ga0495585_0061658_714_1742 | 342 |
| 189 | 3300046506 | Ga0495583_0000062 | Ga0495583_0000062_192529_193557 | 342 |
| 190 | 3300046507 | Ga0495606_0013984 | Ga0495606_0013984_1677_2705 | 342 |
| 191 | 3300046684 | Ga0495669_0014036 | Ga0495669_0014036_915_1943 | 342 |
| 192 | 3300046694 | Ga0495649_0001480 | Ga0495649_0001480_1933_2961 | 342 |
| 193 | 3300048907 | Ga0496104_0197133 | Ga0496104_0197133_483_1511 | 342 |
| 194 | 3300048908 | Ga0496105_0150919 | Ga0496105_0150919_47_1075 | 342 |
| 195 | 3300048912 | Ga0496109_0033778 | Ga0496109_0033778_3334_4362 | 342 |
| 196 | 3300048912 | Ga0496109_0083038 | Ga0496109_0083038_1855_2883 | 342 |
| 197 | 3300048918 | Ga0496115_0093285 | Ga0496115_0093285_1207_2235 | 342 |
| 198 | 3300048924 | Ga0496121_0020827 | Ga0496121_0020827_5067_6095 | 342 |
| 199 | 3300048927 | Ga0496124_0000622 | Ga0496124_0000622_1522_2604 | 342 |
| 200 | 3300048928 | Ga0496125_0076503 | Ga0496125_0076503_457_1539 | 342 |
| 201 | 3300049822 | Ga0501035_0168151 | Ga0501035_0168151_33_1109 | 342 |
| 202 | 3300050493 | nmdc:mga0k408_11403_c1 | nmdc:mga0k408_11403_c1_2994_4022 | 342 |
| 203 | 3300050493 | nmdc:mga0k408_3857_c1 | nmdc:mga0k408_3857_c1_1705_2754 | 342 |
| 204 | 3300053080 | Ga0500635_0000232 | Ga0500635_0000232_19854_20882 | 342 |
| 205 | 3300053122 | Ga0500608_059260 | Ga0500608_059260_659_1687 | 342 |
| 206 | 3300061719 | Ga0466962_0015962 | Ga0466962_0015962_657_1685 | 342 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7orz-assembly1.cif.gz_A | crystal structure of udp-n-acetylenolpyruvoylglucosamine reductase (murb) from pseudomonas aeruginosa in complex with fad and a pyrazole derivative (fragment 18) | 0.9206 | 7 | 342 |
| 1uxy-assembly1.cif.gz_A | murb mutant with ser 229 replaced by ala, complex with enolpyruvyl-udp-n-acetylglucosamine | 0.9191 | 12 | 337 |
| 3i99-assembly1.cif.gz_A | the crystal structure of the udp-n-acetylenolpyruvoylglucosamine reductase from the vibrio cholerae o1 biovar tor | 0.9188 | 7 | 342 |
| 7orz-assembly1.cif.gz_A | crystal structure of udp-n-acetylenolpyruvoylglucosamine reductase (murb) from pseudomonas aeruginosa in complex with fad and a pyrazole derivative (fragment 18) | 0.9129 | 7 | 342 |
| 2q85-assembly1.cif.gz_A | crystal structure of e. coli mur b bound to a naphthyl tetronic acid inihibitor | 0.9113 | 10 | 337 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3tx1A03 | Alpha Beta;Alpha-Beta Complex;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 1;UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain | 0.9404 | 241 | 342 | 3.90.78.10 |
| 4jayA02 | Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; | 0.9267 | 77 | 231 | 3.30.465.10 |
| 4jayA02 | Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; | 0.921 | 77 | 231 | 3.30.465.10 |
| 3i99A03 | Alpha Beta;Alpha-Beta Complex;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 1;UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain | 0.9154 | 232 | 338 | 3.90.78.10 |
| 3i99A02 | Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; | 0.9143 | 77 | 231 | 3.30.465.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A7T8V0-F1-model_v4 | UDP-N-acetylenolpyruvoylglucosamine reductase C-terminal domain-containing protein | 0.986 | 241 | 330 |
GO:0008762
|
| AF-A0A849ENV7-F1-model_v4 | UDP-N-acetylenolpyruvoylglucosamine reductase | 0.9851 | 249 | 342 |
GO:0005829
GO:0008762 GO:0050660 GO:0071555 |
| AF-A0A2E2UG45-F1-model_v4 | UDP-N-acetylenolpyruvoylglucosamine reductase | 0.9763 | 241 | 342 |
GO:0005829
GO:0008762 GO:0050660 GO:0071555 |
| AF-A0A849ENV7-F1-model_v4 | UDP-N-acetylenolpyruvoylglucosamine reductase | 0.9749 | 249 | 342 |
GO:0005829
GO:0008762 GO:0050660 GO:0071555 |
| AF-B0XS02-F1-model_v4 | UDP-N-acetylmuramate dehydrogenase, putative | 0.9706 | 240 | 342 |
GO:0005829
GO:0008762 GO:0050660 GO:0071555 |
Predicted Structure (AlphaFold2)
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