F434251

General Info

Members Datasets Scaffolds Average Seq Length
399 222 342 352

Family's Representative Sequence

Representative Sequence 3300005547|Ga0070693_100007783|Ga0070693_1000077834
Length 379
Sequence MARAAVSTDVPDQPDALPDDLTAGHADGLLAYCRAGFEPELAAELVERAAHAGVGAWARTQRNIGYVELFGASGASLSAALPFADLVFARQKLQLLADLSGLDPKDRVGPVLEALGGRGRYGDLWVEHPDSEAGNPLAGLARAFGNALRPALRQRGLLAERDDPRLPRLHVLLLAGDHLLLARGERKDSAPWPLGVPRLRAPAGAPSRSGMKLDEAFHVLLDEDERARLLQPGMRAADLGAAPGGWSWVLAKRHVRVIAVDNGPLAESVLDTGLVEHVRADGFTWAPPRQQDWLVCDMVESPRKVAARMAEWFAFGWCKHAVFNLKLPMKKRWEETRDCLARFEAAAGRPLVVRARQLYHDREEITVFATDPAARSRVL

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
3 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
4 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
5 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
6 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
7 2643221559 Lysobacter sp. Root559 Isolate Unclassified
8 2643221573 Lysobacter sp. Root604 Isolate Unclassified
9 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
10 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
11 2643221586 Lysobacter sp. Root667 Isolate Unclassified
12 2643221593 Lysobacter sp. Root690 Isolate Unclassified
13 2643221612 Lysobacter sp. Root76 Isolate Unclassified
14 2643221695 Lysobacter sp. Root494 Isolate Unclassified
15 2643221720 Lysobacter sp. Root916 Isolate Unclassified
16 2643221727 Lysobacter sp. Root96 Isolate Unclassified
17 2643221728 Lysobacter sp. Root983 Isolate Unclassified
18 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
19 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
20 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
21 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
22 2818991457 Xanthomonas translucens 569 Isolate Unclassified
23 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
24 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
25 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
26 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
27 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
28 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
29 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
30 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
31 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
32 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
33 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
34 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
35 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
36 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
37 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
38 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
39 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
40 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
41 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
42 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
43 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
44 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
45 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
46 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
47 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
48 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
49 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
50 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
51 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
52 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
53 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
54 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
55 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
56 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
57 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
58 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
59 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
60 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
61 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
62 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
63 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
64 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
65 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
66 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
67 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
68 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
69 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
70 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
71 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
72 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
73 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
74 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
75 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
76 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
77 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
78 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
79 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
80 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
81 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
82 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
83 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
84 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
85 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
86 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
87 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
88 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
89 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
90 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
91 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
92 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
93 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
94 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
95 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
96 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
97 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
98 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
99 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
100 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
101 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
102 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
103 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
104 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
105 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
107 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
108 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
110 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
111 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
112 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
130 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
133 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
134 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
135 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
136 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
137 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
138 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
139 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
140 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
141 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
142 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
143 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
144 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
145 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
146 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
147 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
148 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
149 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
150 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
151 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
152 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
153 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
154 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
155 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
156 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
157 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
158 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
159 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
160 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
161 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
162 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
163 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
164 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
165 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
166 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
167 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
168 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
169 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
170 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
171 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
172 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
173 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
174 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
175 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
176 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
177 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
178 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
179 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
180 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
181 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
182 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
183 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
184 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
185 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
186 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
187 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
188 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
189 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
190 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
191 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
192 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
193 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
194 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
195 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
196 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
197 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
198 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
199 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
200 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
201 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
202 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
204 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
206 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
207 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
208 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
209 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
210 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
211 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
212 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
213 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
214 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
215 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
216 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
217 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
218 3300053734 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 endosphere Metagenome Endosphere
219 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
220 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
221 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
222 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.71
Metatranscriptomes 0
Isolates 14.29

Biome Distribution

Category Percentage (%)
Aerial Root 0.25
Bulb 0
Endosphere 23.56
Nodule 0.25
Rhizoplane 2.51
Rhizosphere 50.38
Stem 0
Stem Tuber 0
Unclassified 23.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_332428 2162886007 Bacteria 4909
2 SwRhRL2b_contig_437430 2162886007 Bacteria 4363
3 JGI25152J39213_1000100 3300002773 Bacteria 60649
4 JGI25151J46595_10000286 3300003187 Bacteria 57223
5 JGI25151J46595_10001701 3300003187 Bacteria 14370
6 JGI25153J46596_10000185 3300003215 Bacteria 60646
7 rootH2_10075743 3300003320 Bacteria 2563
8 Ga0055526_1000072 3300003771 Bacteria 94464
9 Ga0055526_1000681 3300003771 Bacteria 25998
10 Ga0055526_1013141 3300003771 Bacteria 3532
11 Ga0055537_1000665 3300003773 Bacteria 18074
12 Ga0055537_1001012 3300003773 Bacteria 12744
13 Ga0055524_1000173 3300003775 Bacteria 73388
14 Ga0055524_1014239 3300003775 Bacteria 2958
15 Ga0055524_1016880 3300003775 Bacteria 2596
16 Ga0055524_1018709 3300003775 Bacteria 2396
17 Ga0055524_1018797 3300003775 Bacteria 2387
18 Ga0055536_1002434 3300003781 Bacteria 10461
19 Ga0055536_1002439 3300003781 Bacteria 10441
20 Ga0055536_1002489 3300003781 Bacteria 10336
21 Ga0055536_1002665 3300003781 Bacteria 9900
22 Ga0055536_1032202 3300003781 Bacteria 1359
23 Ga0055534_1000628 3300003784 Bacteria 18074
24 Ga0055534_1000665 3300003784 Bacteria 17303
25 Ga0055528_1000085 3300003790 Bacteria 73426
26 Ga0055528_1000354 3300003790 Bacteria 37304
27 Ga0055530_10001405 3300003791 Bacteria 17745
28 Ga0055530_10002266 3300003791 Bacteria 12649
29 Ga0055530_10006317 3300003791 Bacteria 5324
30 Ga0055531_10004756 3300003794 Bacteria 8111
31 Ga0055531_10004760 3300003794 Bacteria 8109
32 Ga0055531_10006779 3300003794 Bacteria 6399
33 Ga0055531_10009252 3300003794 Bacteria 5063
34 Ga0055531_10009993 3300003794 Bacteria 4782
35 Ga0055531_10021821 3300003794 Bacteria 2467
36 Ga0055531_10026916 3300003794 Bacteria 2035
37 Ga0058692_1000032 3300003856 Bacteria 179581
38 Ga0058692_1000107 3300003856 Bacteria 55344
39 Ga0065165_1024162 3300005262 Bacteria 2047
40 Ga0065704_10072772 3300005289 Bacteria 8033
41 Ga0065704_10086549 3300005289 Bacteria 3107
42 Ga0070670_100005468 3300005331 Bacteria 10716
43 Ga0068868_100228933 3300005338 Bacteria 1559
44 Ga0070668_100019591 3300005347 Bacteria 5092
45 Ga0070668_100048978 3300005347 Bacteria 3251
46 Ga0070669_100005440 3300005353 Bacteria 9189
47 Ga0070669_100075489 3300005353 Bacteria 2500
48 Ga0070671_100022054 3300005355 Bacteria 5202
49 Ga0070674_100014120 3300005356 Bacteria 4959
50 Ga0070678_100035902 3300005456 Bacteria 3465
51 Ga0068853_100075476 3300005539 Bacteria 2942
52 Ga0068853_100325328 3300005539 Bacteria 1426
53 Ga0070672_100002050 3300005543 Bacteria 12699
54 Ga0070672_100004035 3300005543 Bacteria 9578
55 Ga0070693_100007783 3300005547 Bacteria 5255
56 Ga0070665_100055875 3300005548 Bacteria 3959
57 Ga0070665_100170076 3300005548 Bacteria 2180
58 Ga0075364_10000088 3300006051 Bacteria 36693
59 Ga0075362_10075489 3300006177 Bacteria 1546
60 Ga0075367_10021354 3300006178 Bacteria 3617
61 Ga0075369_10041635 3300006186 Bacteria 1967
62 Ga0105251_10001430 3300009011 Bacteria 20577
63 Ga0105251_10006046 3300009011 Bacteria 7801
64 Ga0105244_10060957 3300009036 Bacteria 1900
65 Ga0105243_10003698 3300009148 Bacteria 12293
66 Ga0105243_10039951 3300009148 Bacteria 3661
67 Ga0105248_10015030 3300009177 Bacteria 8522
68 Ga0105248_10311622 3300009177 Bacteria 1772
69 Ga0105029_100694 3300009984 Bacteria 1882
70 Ga0105028_104154 3300009993 Bacteria 1511
71 Ga0157373_10026468 3300013100 Bacteria 4190
72 Ga0157371_10000508 3300013102 Bacteria 46925
73 Ga0157371_10011529 3300013102 Bacteria 6798
74 Ga0157371_10050401 3300013102 Bacteria 2958
75 Ga0157371_10052237 3300013102 Bacteria 2903
76 Ga0157371_10211593 3300013102 Bacteria 1391
77 Ga0157370_10127980 3300013104 Bacteria 2370
78 Ga0157369_10021621 3300013105 Bacteria 7194
79 Ga0157369_10193325 3300013105 Bacteria 2137
80 Ga0157375_10012392 3300013308 Bacteria 7563
81 Ga0182008_10000802 3300014497 Bacteria 22013
82 Ga0182008_10006474 3300014497 Bacteria 6542
83 Ga0182006_1009502 3300015261 Bacteria 4355
84 Ga0182006_1012885 3300015261 Bacteria 3648
85 Ga0182006_1013105 3300015261 Bacteria 3607
86 Ga0182006_1013163 3300015261 Bacteria 3596
87 Ga0182007_10000906 3300015262 Bacteria 16403
88 Ga0182005_1000561 3300015265 Bacteria 18577
89 Ga0182005_1001840 3300015265 Bacteria 8068
90 Ga0183360_10001 3300015689 Bacteria 3943671
91 Ga0163161_10001787 3300017792 Bacteria 15686
92 Ga0163161_10017339 3300017792 Bacteria 5039
93 Ga0207425_1000311 3300025245 Bacteria 35119
94 Ga0207425_1017234 3300025245 Bacteria 1591
95 Ga0209129_1000011 3300025258 Bacteria 568657
96 Ga0209565_1000001 3300025263 Bacteria 2950419
97 Ga0209565_1000274 3300025263 Bacteria 52312
98 Ga0209673_1000001 3300025273 Bacteria 3176258
99 Ga0209673_1000032 3300025273 Bacteria 339956
100 Ga0209673_1004055 3300025273 Bacteria 8097
101 Ga0209130_1010287 3300025284 Bacteria 2589
102 Ga0209675_1000001 3300025291 Bacteria 2950293
103 Ga0209675_1000233 3300025291 Bacteria 55562
104 Ga0209675_1019407 3300025291 Bacteria 1872
105 Ga0209676_1000131 3300025292 Bacteria 185298
106 Ga0209676_1000436 3300025292 Bacteria 72143
107 Ga0209676_1000594 3300025292 Bacteria 53972
108 Ga0209676_1000813 3300025292 Bacteria 40787
109 Ga0209676_1000875 3300025292 Bacteria 38585
110 Ga0209676_1001240 3300025292 Bacteria 26876
111 Ga0209676_1004110 3300025292 Bacteria 8295
112 Ga0209676_1004817 3300025292 Bacteria 7326
113 Ga0209676_1007566 3300025292 Bacteria 5059
114 Ga0209676_1009886 3300025292 Bacteria 4050
115 Ga0209676_1019373 3300025292 Bacteria 2342
116 Ga0209025_1000002 3300025294 Bacteria 1393142
117 Ga0209025_1000006 3300025294 Bacteria 1153444
118 Ga0209025_1000564 3300025294 Bacteria 67936
119 Ga0209025_1003024 3300025294 Bacteria 16604
120 Ga0209025_1028628 3300025294 Bacteria 2722
121 Ga0209564_1000001 3300025295 Bacteria 3176258
122 Ga0209564_1000037 3300025295 Bacteria 414794
123 Ga0209564_1005762 3300025295 Bacteria 6916
124 Ga0209758_1000003 3300025297 Bacteria 1398533
125 Ga0209758_1007074 3300025297 Bacteria 7777
126 Ga0209758_1018546 3300025297 Bacteria 3402
127 Ga0209050_1000147 3300025298 Bacteria 164512
128 Ga0209050_1000328 3300025298 Bacteria 94963
129 Ga0209050_1009346 3300025298 Bacteria 5034
130 Ga0209050_1015059 3300025298 Bacteria 3280
131 Ga0209256_1000006 3300025299 Bacteria 1250310
132 Ga0209256_1001837 3300025299 Bacteria 19742
133 Ga0209256_1002134 3300025299 Bacteria 17096
134 Ga0209256_1005493 3300025299 Bacteria 7259
135 Ga0209256_1012901 3300025299 Bacteria 3146
136 Ga0209051_1001685 3300025303 Bacteria 17778
137 Ga0209257_1000086 3300025304 Bacteria 287437
138 Ga0209257_1000343 3300025304 Bacteria 96876
139 Ga0209257_1000567 3300025304 Bacteria 62634
140 Ga0209257_1000655 3300025304 Bacteria 54777
141 Ga0209257_1000738 3300025304 Bacteria 49567
142 Ga0209257_1001357 3300025304 Bacteria 29616
143 Ga0209257_1002349 3300025304 Bacteria 19030
144 Ga0209257_1006199 3300025304 Bacteria 7848
145 Ga0209257_1012721 3300025304 Bacteria 3847
146 Ga0207713_1002689 3300025735 Bacteria 12711
147 Ga0207713_1011905 3300025735 Bacteria 4693
148 Ga0207705_10117365 3300025909 Bacteria 1971
149 Ga0207695_10133777 3300025913 Bacteria 2434
150 Ga0207657_10118497 3300025919 Bacteria 2179
151 Ga0207681_10200685 3300025923 Bacteria 1531
152 Ga0207681_10261362 3300025923 Bacteria 1355
153 Ga0207650_10012465 3300025925 Bacteria 5869
154 Ga0207650_10019618 3300025925 Bacteria 4754
155 Ga0207644_10019941 3300025931 Bacteria 4553
156 Ga0207644_10123626 3300025931 Bacteria 1973
157 Ga0207709_10002169 3300025935 Bacteria 12571
158 Ga0207709_10004394 3300025935 Bacteria 8162
159 Ga0207709_10067434 3300025935 Bacteria 2258
160 Ga0207691_10001149 3300025940 Bacteria 26274
161 Ga0207691_10010091 3300025940 Bacteria 9063
162 Ga0207668_10008349 3300025972 Bacteria 6168
163 Ga0207668_10015356 3300025972 Bacteria 4756
164 Ga0207677_10229215 3300026023 Bacteria 1495
165 Ga0207639_10024923 3300026041 Bacteria 4334
166 Ga0209371_1000028 3300027312 Bacteria 429688
167 Ga0209371_1000055 3300027312 Bacteria 257599
168 Ga0209983_1001373 3300027665 Bacteria 5421
169 Ga0209974_10019848 3300027876 Bacteria 2228
170 Ga0268266_10282355 3300028379 Bacteria 1544
171 Ga0268256_1000030 3300030500 Bacteria 429688
172 Ga0268256_1000054 3300030500 Bacteria 257599
173 Ga0316183_1021347 3300030742 Bacteria 2127
174 Ga0307513_10018681 3300031456 Bacteria 8279
175 Ga0307408_100074729 3300031548 Bacteria 2516
176 Ga0307408_100085785 3300031548 Bacteria 2365
177 Ga0307408_100211611 3300031548 Bacteria 1576
178 Ga0307405_10029660 3300031731 Bacteria 3199
179 Ga0307405_10050488 3300031731 Bacteria 2576
180 Ga0307413_10042847 3300031824 Bacteria 2662
181 Ga0307413_10068521 3300031824 Bacteria 2223
182 Ga0307410_10054986 3300031852 Bacteria 2701
183 Ga0307406_10003526 3300031901 Bacteria 8524
184 Ga0307406_10088477 3300031901 Bacteria 2078
185 Ga0307412_10064511 3300031911 Bacteria 2475
186 Ga0307409_100078480 3300031995 Bacteria 2656
187 Ga0307409_100185523 3300031995 Bacteria 1846
188 Ga0307409_100311796 3300031995 Bacteria 1469
189 Ga0307414_10001050 3300032004 Bacteria 14120
190 Ga0307414_10005555 3300032004 Bacteria 6955
191 Ga0307414_10012778 3300032004 Bacteria 4980
192 Ga0307414_10033748 3300032004 Bacteria 3385
193 Ga0307414_10034431 3300032004 Bacteria 3358
194 Ga0307414_10055711 3300032004 Bacteria 2770
195 Ga0307414_10114532 3300032004 Bacteria 2060
196 Ga0307414_10114937 3300032004 Bacteria 2057
197 Ga0307411_10190946 3300032005 Bacteria 1564
198 Ga0307411_10207088 3300032005 Bacteria 1511
199 Ga0395900_0029103 3300037418 Bacteria 5666
200 Ga0395898_0141766 3300037466 Bacteria 2301
201 Ga0395905_0000745 3300037471 Bacteria 42879
202 Ga0395905_0015505 3300037471 Bacteria 7244
203 Ga0237819_00010 3300038705 Bacteria 65492
204 Ga0237816_00203 3300039145 Bacteria 4843
205 Ga0439436_0005386 3300041404 Bacteria 3920
206 Ga0439439_0003513 3300041406 Bacteria 3462
207 Ga0439447_000639 3300041407 Bacteria 13043
208 Ga0439465_0000919 3300041413 Bacteria 9319
209 Ga0439465_0011567 3300041413 Bacteria 2769
210 Ga0451797_0549835 3300041453 Bacteria 1390
211 Ga0451800_1097985 3300041459 Bacteria 3219
212 Ga0451806_068305 3300041462 Bacteria 3175
213 Ga0451804_0990427 3300041463 Bacteria 2440
214 Ga0451807_1980282 3300041486 Bacteria 3124
215 Ga0451837_1022148 3300041494 Bacteria 5478
216 Ga0451837_1132121 3300041494 Bacteria 1979
217 Ga0451843_1675044 3300041509 Bacteria 2004
218 Ga0439432_002626 3300042006 Bacteria 6745
219 Ga0439432_021962 3300042006 Bacteria 2111
220 Ga0439432_026869 3300042006 Bacteria 1883
221 Ga0439432_039859 3300042006 Bacteria 1492
222 Ga0439449_0000060 3300042007 Bacteria 33343
223 Ga0439449_0004997 3300042007 Bacteria 5100
224 Ga0439449_0020094 3300042007 Bacteria 2503
225 Ga0439449_0035599 3300042007 Bacteria 1853
226 Ga0439449_0059626 3300042007 Bacteria 1409
227 Ga0451577_0002652 3300042876 Bacteria 20952
228 Ga0453684_0006590 3300044712 Bacteria 21964
229 Ga0453684_0193639 3300044712 Bacteria 2376
230 Ga0451576_0000042 3300045051 Bacteria 342102
231 Ga0495638_0001994 3300046460 Bacteria 17417
232 Ga0495638_0074090 3300046460 Bacteria 2077
233 Ga0495607_0033701 3300046501 Bacteria 3114
234 Ga0495606_0025538 3300046507 Bacteria 4228
235 Ga0495610_0006465 3300046512 Bacteria 8055
236 Ga0495616_0008299 3300046513 Bacteria 6163
237 Ga0495631_0001175 3300046518 Bacteria 16180
238 Ga0495643_0035985 3300046522 Bacteria 2722
239 Ga0495663_0001534 3300046525 Bacteria 7259
240 Ga0495663_0002691 3300046525 Bacteria 5278
241 Ga0495663_0004164 3300046525 Bacteria 4089
242 Ga0495663_0058023 3300046525 Bacteria 1212
243 Ga0495654_0098244 3300046530 Bacteria 1351
244 Ga0495598_0000904 3300046537 Bacteria 5719
245 Ga0495621_0008348 3300046539 Bacteria 3102
246 Ga0495621_0023198 3300046539 Bacteria 2063
247 Ga0495633_0004565 3300046558 Bacteria 8738
248 Ga0495633_0008257 3300046558 Bacteria 5891
249 Ga0495633_0008262 3300046558 Bacteria 5889
250 Ga0495656_0006231 3300046615 Bacteria 4174
251 Ga0495656_0020490 3300046615 Bacteria 2565
252 Ga0495668_0008077 3300046616 Bacteria 6627
253 Ga0495671_0047211 3300046692 Bacteria 2152
254 Ga0495636_0001141 3300047318 Bacteria 10006
255 Ga0495636_0011615 3300047318 Bacteria 3487
256 Ga0495636_0052958 3300047318 Bacteria 1703
257 Ga0495672_0000564 3300047320 Bacteria 41848
258 Ga0495681_0052776 3300047470 Bacteria 1906
259 Ga0495686_0012990 3300047472 Bacteria 5802
260 Ga0495686_0020948 3300047472 Bacteria 4353
261 Ga0496104_0058324 3300048907 Bacteria 3654
262 Ga0496108_0171869 3300048911 Bacteria 1875
263 Ga0496112_0100666 3300048915 Bacteria 2859
264 Ga0496113_0072422 3300048916 Bacteria 2622
265 Ga0496114_0002827 3300048917 Bacteria 13308
266 Ga0496116_0002825 3300048919 Bacteria 17815
267 Ga0496116_0013415 3300048919 Bacteria 6607
268 Ga0496117_0000806 3300048920 Bacteria 48630
269 Ga0496117_0002569 3300048920 Bacteria 22600
270 Ga0496117_0003786 3300048920 Bacteria 17270
271 Ga0496117_0005542 3300048920 Bacteria 13213
272 Ga0496118_0002155 3300048921 Bacteria 27432
273 Ga0496118_0002703 3300048921 Bacteria 23369
274 Ga0496118_0008786 3300048921 Bacteria 10360
275 Ga0496118_0025437 3300048921 Bacteria 5076
276 Ga0496118_0038299 3300048921 Bacteria 3845
277 Ga0496119_0002512 3300048922 Bacteria 20037
278 Ga0496119_0003206 3300048922 Bacteria 17141
279 Ga0496120_0000708 3300048923 Bacteria 48913
280 Ga0496120_0000988 3300048923 Bacteria 38579
281 Ga0496121_0007461 3300048924 Bacteria 13211
282 Ga0496121_0016830 3300048924 Bacteria 7519
283 Ga0496121_0017858 3300048924 Bacteria 7201
284 Ga0496121_0020423 3300048924 Bacteria 6558
285 Ga0496122_0000772 3300048925 Bacteria 61688
286 Ga0496122_0003606 3300048925 Bacteria 20169
287 Ga0496122_0010238 3300048925 Bacteria 9713
288 Ga0496122_0011057 3300048925 Bacteria 9210
289 Ga0496122_0018410 3300048925 Bacteria 6455
290 Ga0496122_0031660 3300048925 Bacteria 4395
291 Ga0496123_0000417 3300048926 Bacteria 77334
292 Ga0496123_0000613 3300048926 Bacteria 59887
293 Ga0496123_0009883 3300048926 Bacteria 8515
294 Ga0496123_0011389 3300048926 Bacteria 7713
295 Ga0496123_0011561 3300048926 Bacteria 7636
296 Ga0496123_0014546 3300048926 Bacteria 6513
297 Ga0496123_0031967 3300048926 Bacteria 3820
298 Ga0496124_0000032 3300048927 Bacteria 332524
299 Ga0496124_0000866 3300048927 Bacteria 49473
300 Ga0496124_0002325 3300048927 Bacteria 25085
301 Ga0496124_0010018 3300048927 Bacteria 9672
302 Ga0496124_0012323 3300048927 Bacteria 8444
303 Ga0496124_0014274 3300048927 Bacteria 7689
304 Ga0496124_0021271 3300048927 Bacteria 5980
305 Ga0496124_0031104 3300048927 Bacteria 4728
306 Ga0496124_0031804 3300048927 Bacteria 4666
307 Ga0496124_0032327 3300048927 Bacteria 4620
308 Ga0496124_0082741 3300048927 Bacteria 2634
309 Ga0496124_0178877 3300048927 Bacteria 1634
310 Ga0496124_0232131 3300048927 Bacteria 1378
311 Ga0496125_0003489 3300048928 Bacteria 19001
312 Ga0496125_0004937 3300048928 Bacteria 15092
313 Ga0496125_0024837 3300048928 Bacteria 5499
314 Ga0496125_0031720 3300048928 Bacteria 4705
315 Ga0496125_0033618 3300048928 Bacteria 4534
316 Ga0496125_0044735 3300048928 Bacteria 3737
317 Ga0496125_0053628 3300048928 Bacteria 3303
318 Ga0496126_0002754 3300048929 Bacteria 23187
319 Ga0496126_0248132 3300048929 Bacteria 1484
320 Ga0501290_001500 3300049513 Bacteria 3186
321 Ga0501033_0001518 3300049570 Bacteria 20530
322 Ga0501033_0046293 3300049570 Bacteria 3234
323 Ga0501034_0000513 3300049571 Bacteria 62217
324 Ga0501034_0001257 3300049571 Bacteria 34417
325 Ga0501034_0012187 3300049571 Bacteria 8892
326 Ga0501037_0094182 3300049573 Bacteria 2166
327 Ga0501038_0012654 3300049574 Bacteria 7712
328 Ga0501039_0094206 3300049575 Bacteria 2334
329 Ga0501043_0001883 3300049579 Bacteria 17976
330 Ga0501043_0004602 3300049579 Bacteria 11191
331 Ga0501047_0052406 3300049581 Bacteria 3944
332 Ga0501070_0081937 3300049586 Bacteria 2670
333 Ga0501223_007314 3300049663 Bacteria 2263
334 Ga0501259_014980 3300049688 Bacteria 1320
335 Ga0501225_0004876 3300049705 Bacteria 3968
336 Ga0501266_001948 3300049763 Bacteria 2599
337 Ga0501272_005437 3300049769 Bacteria 1341
338 Ga0501035_0081313 3300049822 Bacteria 2859
339 Ga0501044_0006633 3300049823 Bacteria 12763
340 nmdc:mga00v17_582_c2 3300050491 Bacteria 10150
341 Ga0500634_0000178 3300053161 Bacteria 21040
342 Ga0500565_001865 3300053734 Bacteria 1495

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300027665 Ga0209983_1001373 Ga0209983_10013733 311
2 3300027876 Ga0209974_10019848 Ga0209974_100198482 311
3 3300046539 Ga0495621_0023198 Ga0495621_0023198_1014_2006 320
4 3300025913 Ga0207695_10133777 Ga0207695_101337772 322
5 3300049575 Ga0501039_0094206 Ga0501039_0094206_893_1984 323
6 3300041459 Ga0451800_1097985 Ga0451800_1097985_2008_3057 330
7 3300041462 Ga0451806_068305 Ga0451806_068305_1963_3012 330
8 3300041463 Ga0451804_0990427 Ga0451804_0990427_162_1211 330
9 3300041486 Ga0451807_1980282 Ga0451807_1980282_1967_3016 330
10 3300003320 rootH2_10075743 rootH2_100757432 337
11 3300005543 Ga0070672_100002050 Ga0070672_1000020504 340
12 3300025940 Ga0207691_10010091 Ga0207691_100100914 340
13 iso_pu_bacteria 2571042365 2572254493 341
14 3300048928 Ga0496125_0031720 Ga0496125_0031720_1007_2281 342
15 iso_pu_bacteria 2576861471 2578459597 342
16 iso_pu_bacteria 2842780639 2842783347 342
17 iso_pu_bacteria 2852649853 2852653032 342
18 iso_pu_bacteria 2857442823 2857445012 342
19 iso_pu_bacteria 2939589442 2939592600 342
20 iso_pu_bacteria 2939622612 2939626149 342
21 iso_pu_bacteria 2941475908 2941477348 342
22 iso_pu_bacteria 2974307012 2974310044 342
23 iso_pu_bacteria 2977247770 2977250778 342
24 iso_pu_bacteria 2984514374 2984514736 342
25 iso_pu_bacteria 2995948881 2995950263 342
26 3300031824 Ga0307413_10042847 Ga0307413_100428472 343
27 3300032004 Ga0307414_10114937 Ga0307414_101149373 343
28 3300042007 Ga0439449_0004997 Ga0439449_0004997_2501_3583 343
29 3300046615 Ga0495656_0020490 Ga0495656_0020490_739_1812 343
30 3300047318 Ga0495636_0001141 Ga0495636_0001141_6969_8045 343
31 iso_pu_bacteria 2747842501 2748018848 343
32 iso_pu_bacteria 2894414249 2894414435 343
33 iso_pu_bacteria 2895498888 2895501378 343
34 iso_pu_bacteria 2895511927 2895514521 343
35 iso_pu_bacteria 2895522137 2895523997 343
36 iso_pu_bacteria 2895525241 2895527485 343
37 iso_pu_bacteria 2987605356 2987608030 343
38 3300005353 Ga0070669_100075489 Ga0070669_1000754892 344
39 3300005356 Ga0070674_100014120 Ga0070674_1000141202 344
40 3300005543 Ga0070672_100004035 Ga0070672_1000040352 344
41 3300009148 Ga0105243_10039951 Ga0105243_100399513 344
42 3300009177 Ga0105248_10015030 Ga0105248_100150308 344
43 3300025923 Ga0207681_10200685 Ga0207681_102006851 344
44 3300025935 Ga0207709_10067434 Ga0207709_100674343 344
45 3300025940 Ga0207691_10001149 Ga0207691_1000114925 344
46 iso_pu_bacteria 2547132130 2547500715 344
47 iso_pu_bacteria 2643221559 2643815572 344
48 iso_pu_bacteria 2643221586 2643941131 344
49 iso_pu_bacteria 2643221612 2644079796 344
50 iso_pu_bacteria 2643221695 2644528368 344
51 iso_pu_bacteria 2643221727 2644696053 344
52 iso_pu_bacteria 2747842428 2747951164 344
53 iso_pu_bacteria 2765235840 2765577710 344
54 iso_pu_bacteria 2816332141 2816519484 344
55 iso_pu_bacteria 2842391507 2842395644 344
56 iso_pu_bacteria 2842757796 2842759668 344
57 iso_pu_bacteria 2874220319 2874224567 344
58 iso_pu_bacteria 2919089067 2919091581 344
59 iso_pu_bacteria 2919134579 2919135009 344
60 iso_pu_bacteria 2928496128 2928498912 344
61 iso_pu_bacteria 2931380184 2931382032 344
62 iso_pu_bacteria 2937610967 2937611208 344
63 iso_pu_bacteria 2939626828 2939630149 344
64 iso_pu_bacteria 2961047084 2961051331 344
65 iso_pu_bacteria 2961064222 2961066413 344
66 3300003775 Ga0055524_1014239 Ga0055524_10142392 345
67 3300003781 Ga0055536_1002434 Ga0055536_10024349 345
68 3300003781 Ga0055536_1002439 Ga0055536_10024399 345
69 3300003791 Ga0055530_10001405 Ga0055530_100014059 345
70 3300003791 Ga0055530_10002266 Ga0055530_100022665 345
71 3300003794 Ga0055531_10004756 Ga0055531_100047568 345
72 3300003794 Ga0055531_10004760 Ga0055531_100047608 345
73 3300005262 Ga0065165_1024162 Ga0065165_10241622 345
74 3300006051 Ga0075364_10000088 Ga0075364_100000883 345
75 3300009011 Ga0105251_10006046 Ga0105251_100060465 345
76 3300015261 Ga0182006_1013163 Ga0182006_10131635 345
77 3300025292 Ga0209676_1000594 Ga0209676_100059439 345
78 3300025292 Ga0209676_1000813 Ga0209676_10008138 345
79 3300025298 Ga0209050_1000147 Ga0209050_100014757 345
80 3300025298 Ga0209050_1000328 Ga0209050_100032846 345
81 3300025299 Ga0209256_1001837 Ga0209256_100183710 345
82 3300025303 Ga0209051_1001685 Ga0209051_10016853 345
83 3300025304 Ga0209257_1000086 Ga0209257_100008644 345
84 3300025304 Ga0209257_1000655 Ga0209257_100065540 345
85 3300025735 Ga0207713_1002689 Ga0207713_100268910 345
86 3300048927 Ga0496124_0000032 Ga0496124_0000032_50447_51493 345
87 3300048927 Ga0496124_0000866 Ga0496124_0000866_8268_9305 345
88 3300050491 nmdc:mga00v17_582_c2 nmdc:mga00v17_582_c2_7903_8961 345
89 iso_pu_bacteria 2524614729 2525556220 345
90 iso_pu_bacteria 2627854209 2630649450 345
91 iso_pu_bacteria 2643221573 2643881733 345
92 iso_pu_bacteria 2643221593 2643976303 345
93 iso_pu_bacteria 2643221720 2644663107 345
94 iso_pu_bacteria 2643221728 2644699734 345
95 iso_pu_bacteria 2818991457 2819662695 345
96 iso_pu_bacteria 2852684882 2852687564 345
97 iso_pu_bacteria 2919130084 2919134253 345
98 iso_pu_bacteria 2929195423 2929199001 345
99 iso_pu_bacteria 2941489479 2941490857 345
100 3300003771 Ga0055526_1000681 Ga0055526_100068128 346
101 3300003771 Ga0055526_1013141 Ga0055526_10131413 346
102 3300003773 Ga0055537_1001012 Ga0055537_100101210 346
103 3300003775 Ga0055524_1016880 Ga0055524_10168802 346
104 3300003775 Ga0055524_1018709 Ga0055524_10187091 346
105 3300003775 Ga0055524_1018797 Ga0055524_10187973 346
106 3300003781 Ga0055536_1002489 Ga0055536_10024896 346
107 3300003781 Ga0055536_1032202 Ga0055536_10322021 346
108 3300003784 Ga0055534_1000665 Ga0055534_100066516 346
109 3300003790 Ga0055528_1000354 Ga0055528_100035419 346
110 3300003791 Ga0055530_10006317 Ga0055530_100063174 346
111 3300003794 Ga0055531_10006779 Ga0055531_100067794 346
112 3300003794 Ga0055531_10009252 Ga0055531_100092522 346
113 3300003794 Ga0055531_10021821 Ga0055531_100218211 346
114 3300003794 Ga0055531_10026916 Ga0055531_100269161 346
115 3300005338 Ga0068868_100228933 Ga0068868_1002289332 346
116 3300005539 Ga0068853_100325328 Ga0068853_1003253282 346
117 3300005548 Ga0070665_100055875 Ga0070665_1000558753 346
118 3300005548 Ga0070665_100170076 Ga0070665_1001700763 346
119 3300006178 Ga0075367_10021354 Ga0075367_100213542 346
120 3300006186 Ga0075369_10041635 Ga0075369_100416353 346
121 3300009036 Ga0105244_10060957 Ga0105244_100609572 346
122 3300009984 Ga0105029_100694 Ga0105029_1006943 346
123 3300009993 Ga0105028_104154 Ga0105028_1041541 346
124 3300013100 Ga0157373_10026468 Ga0157373_100264683 346
125 3300013102 Ga0157371_10000508 Ga0157371_1000050810 346
126 3300013102 Ga0157371_10052237 Ga0157371_100522373 346
127 3300013105 Ga0157369_10021621 Ga0157369_100216216 346
128 3300014497 Ga0182008_10000802 Ga0182008_100008023 346
129 3300014497 Ga0182008_10006474 Ga0182008_100064743 346
130 3300015261 Ga0182006_1012885 Ga0182006_10128853 346
131 3300015261 Ga0182006_1013105 Ga0182006_10131054 346
132 3300015262 Ga0182007_10000906 Ga0182007_1000090616 346
133 3300015265 Ga0182005_1000561 Ga0182005_10005616 346
134 3300017792 Ga0163161_10001787 Ga0163161_100017873 346
135 3300017792 Ga0163161_10017339 Ga0163161_100173393 346
136 3300025263 Ga0209565_1000274 Ga0209565_100027453 346
137 3300025273 Ga0209673_1000032 Ga0209673_100003227 346
138 3300025273 Ga0209673_1004055 Ga0209673_10040557 346
139 3300025284 Ga0209130_1010287 Ga0209130_10102872 346
140 3300025291 Ga0209675_1000233 Ga0209675_100023312 346
141 3300025291 Ga0209675_1019407 Ga0209675_10194072 346
142 3300025292 Ga0209676_1000131 Ga0209676_100013113 346
143 3300025292 Ga0209676_1000875 Ga0209676_100087522 346
144 3300025292 Ga0209676_1001240 Ga0209676_100124031 346
145 3300025292 Ga0209676_1004110 Ga0209676_10041106 346
146 3300025292 Ga0209676_1004817 Ga0209676_10048177 346
147 3300025292 Ga0209676_1007566 Ga0209676_10075662 346
148 3300025292 Ga0209676_1009886 Ga0209676_10098864 346
149 3300025292 Ga0209676_1019373 Ga0209676_10193731 346
150 3300025294 Ga0209025_1000564 Ga0209025_100056447 346
151 3300025294 Ga0209025_1003024 Ga0209025_10030248 346
152 3300025294 Ga0209025_1028628 Ga0209025_10286282 346
153 3300025295 Ga0209564_1000037 Ga0209564_1000037378 346
154 3300025295 Ga0209564_1005762 Ga0209564_10057624 346
155 3300025297 Ga0209758_1018546 Ga0209758_10185463 346
156 3300025298 Ga0209050_1009346 Ga0209050_10093466 346
157 3300025298 Ga0209050_1015059 Ga0209050_10150593 346
158 3300025299 Ga0209256_1002134 Ga0209256_10021349 346
159 3300025299 Ga0209256_1005493 Ga0209256_10054934 346
160 3300025299 Ga0209256_1012901 Ga0209256_10129014 346
161 3300025304 Ga0209257_1000343 Ga0209257_100034359 346
162 3300025304 Ga0209257_1000738 Ga0209257_100073848 346
163 3300025304 Ga0209257_1002349 Ga0209257_100234917 346
164 3300025304 Ga0209257_1006199 Ga0209257_10061997 346
165 3300025304 Ga0209257_1012721 Ga0209257_10127214 346
166 3300025919 Ga0207657_10118497 Ga0207657_101184971 346
167 3300025935 Ga0207709_10002169 Ga0207709_100021697 346
168 3300025972 Ga0207668_10008349 Ga0207668_100083494 346
169 3300026023 Ga0207677_10229215 Ga0207677_102292151 346
170 3300027312 Ga0209371_1000028 Ga0209371_1000028337 346
171 3300028379 Ga0268266_10282355 Ga0268266_102823552 346
172 3300030500 Ga0268256_1000030 Ga0268256_100003058 346
173 3300030742 Ga0316183_1021347 Ga0316183_10213473 346
174 3300031548 Ga0307408_100085785 Ga0307408_1000857853 346
175 3300031731 Ga0307405_10050488 Ga0307405_100504883 346
176 3300031824 Ga0307413_10068521 Ga0307413_100685212 346
177 3300031852 Ga0307410_10054986 Ga0307410_100549863 346
178 3300031901 Ga0307406_10088477 Ga0307406_100884772 346
179 3300031995 Ga0307409_100078480 Ga0307409_1000784802 346
180 3300031995 Ga0307409_100311796 Ga0307409_1003117962 346
181 3300032004 Ga0307414_10005555 Ga0307414_100055554 346
182 3300032004 Ga0307414_10034431 Ga0307414_100344312 346
183 3300032004 Ga0307414_10055711 Ga0307414_100557112 346
184 3300032005 Ga0307411_10190946 Ga0307411_101909462 346
185 3300032005 Ga0307411_10207088 Ga0307411_102070881 346
186 3300041404 Ga0439436_0005386 Ga0439436_0005386_2022_3089 346
187 3300041406 Ga0439439_0003513 Ga0439439_0003513_986_2053 346
188 3300041413 Ga0439465_0011567 Ga0439465_0011567_1290_2354 346
189 3300042006 Ga0439432_021962 Ga0439432_021962_121_1167 346
190 3300042006 Ga0439432_039859 Ga0439432_039859_243_1289 346
191 3300042007 Ga0439449_0020094 Ga0439449_0020094_685_1752 346
192 3300042007 Ga0439449_0035599 Ga0439449_0035599_207_1271 346
193 3300042876 Ga0451577_0002652 Ga0451577_0002652_8546_9655 346
194 3300044712 Ga0453684_0193639 Ga0453684_0193639_352_1461 346
195 3300046460 Ga0495638_0001994 Ga0495638_0001994_14829_15875 346
196 3300046460 Ga0495638_0074090 Ga0495638_0074090_178_1269 346
197 3300046512 Ga0495610_0006465 Ga0495610_0006465_1422_2468 346
198 3300046518 Ga0495631_0001175 Ga0495631_0001175_12536_13582 346
199 3300046522 Ga0495643_0035985 Ga0495643_0035985_708_1754 346
200 3300046525 Ga0495663_0001534 Ga0495663_0001534_1243_2289 346
201 3300046525 Ga0495663_0058023 Ga0495663_0058023_124_1188 346
202 3300046539 Ga0495621_0008348 Ga0495621_0008348_1657_2721 346
203 3300046558 Ga0495633_0008262 Ga0495633_0008262_3856_4902 346
204 3300047318 Ga0495636_0052958 Ga0495636_0052958_35_1099 346
205 3300047320 Ga0495672_0000564 Ga0495672_0000564_980_2026 346
206 3300047470 Ga0495681_0052776 Ga0495681_0052776_491_1537 346
207 3300047472 Ga0495686_0020948 Ga0495686_0020948_2354_3400 346
208 3300048907 Ga0496104_0058324 Ga0496104_0058324_1370_2416 346
209 3300048919 Ga0496116_0002825 Ga0496116_0002825_14421_15488 346
210 3300048919 Ga0496116_0013415 Ga0496116_0013415_4423_5469 346
211 3300048920 Ga0496117_0000806 Ga0496117_0000806_1504_2550 346
212 3300048920 Ga0496117_0003786 Ga0496117_0003786_1433_2479 346
213 3300048920 Ga0496117_0005542 Ga0496117_0005542_4803_5849 346
214 3300048921 Ga0496118_0002155 Ga0496118_0002155_8253_9299 346
215 3300048921 Ga0496118_0002703 Ga0496118_0002703_14097_15143 346
216 3300048921 Ga0496118_0008786 Ga0496118_0008786_8596_9642 346
217 3300048921 Ga0496118_0038299 Ga0496118_0038299_1564_2610 346
218 3300048922 Ga0496119_0003206 Ga0496119_0003206_8196_9242 346
219 3300048923 Ga0496120_0000708 Ga0496120_0000708_7250_8296 346
220 3300048924 Ga0496121_0016830 Ga0496121_0016830_4920_5966 346
221 3300048924 Ga0496121_0017858 Ga0496121_0017858_6016_7062 346
222 3300048924 Ga0496121_0020423 Ga0496121_0020423_5304_6371 346
223 3300048925 Ga0496122_0010238 Ga0496122_0010238_8105_9151 346
224 3300048925 Ga0496122_0011057 Ga0496122_0011057_649_1695 346
225 3300048925 Ga0496122_0018410 Ga0496122_0018410_649_1695 346
226 3300048926 Ga0496123_0009883 Ga0496123_0009883_5964_7010 346
227 3300048926 Ga0496123_0011389 Ga0496123_0011389_5867_6913 346
228 3300048926 Ga0496123_0011561 Ga0496123_0011561_5724_6770 346
229 3300048926 Ga0496123_0031967 Ga0496123_0031967_736_1782 346
230 3300048927 Ga0496124_0010018 Ga0496124_0010018_5546_6592 346
231 3300048927 Ga0496124_0012323 Ga0496124_0012323_5663_6709 346
232 3300048927 Ga0496124_0014274 Ga0496124_0014274_6496_7542 346
233 3300048927 Ga0496124_0021271 Ga0496124_0021271_3789_4835 346
234 3300048927 Ga0496124_0031104 Ga0496124_0031104_2154_3200 346
235 3300048927 Ga0496124_0031804 Ga0496124_0031804_2001_3068 346
236 3300048927 Ga0496124_0032327 Ga0496124_0032327_605_1651 346
237 3300048927 Ga0496124_0082741 Ga0496124_0082741_1121_2167 346
238 3300048927 Ga0496124_0178877 Ga0496124_0178877_39_1085 346
239 3300048928 Ga0496125_0003489 Ga0496125_0003489_1572_2618 346
240 3300048928 Ga0496125_0004937 Ga0496125_0004937_9943_10989 346
241 3300048928 Ga0496125_0024837 Ga0496125_0024837_884_1930 346
242 3300048928 Ga0496125_0033618 Ga0496125_0033618_664_1710 346
243 3300048928 Ga0496125_0053628 Ga0496125_0053628_906_1952 346
244 3300048929 Ga0496126_0002754 Ga0496126_0002754_1584_2630 346
245 3300048929 Ga0496126_0248132 Ga0496126_0248132_32_1078 346
246 3300049513 Ga0501290_001500 Ga0501290_001500_110_1195 346
247 3300049571 Ga0501034_0012187 Ga0501034_0012187_7730_8779 346
248 3300049579 Ga0501043_0001883 Ga0501043_0001883_2267_3331 346
249 3300049688 Ga0501259_014980 Ga0501259_014980_231_1280 346
250 3300049763 Ga0501266_001948 Ga0501266_001948_825_1874 346
251 3300049769 Ga0501272_005437 Ga0501272_005437_93_1142 346
252 3300053734 Ga0500565_001865 Ga0500565_001865_277_1323 346
253 iso_pu_bacteria 2643221579 2643907238 346
254 iso_pu_bacteria 2643221581 2643915148 346
255 iso_pu_bacteria 2923516293 2923519312 346
256 3300002773 JGI25152J39213_1000100 JGI25152J39213_100010053 347
257 3300003187 JGI25151J46595_10000286 JGI25151J46595_1000028652 347
258 3300003187 JGI25151J46595_10001701 JGI25151J46595_100017016 347
259 3300003215 JGI25153J46596_10000185 JGI25153J46596_1000018553 347
260 3300003771 Ga0055526_1000072 Ga0055526_100007268 347
261 3300003773 Ga0055537_1000665 Ga0055537_10006653 347
262 3300003775 Ga0055524_1000173 Ga0055524_100017354 347
263 3300003784 Ga0055534_1000628 Ga0055534_100062816 347
264 3300003790 Ga0055528_1000085 Ga0055528_100008554 347
265 3300003794 Ga0055531_10009993 Ga0055531_100099933 347
266 3300005347 Ga0070668_100019591 Ga0070668_1000195914 347
267 3300005353 Ga0070669_100005440 Ga0070669_1000054408 347
268 3300005355 Ga0070671_100022054 Ga0070671_1000220543 347
269 3300005539 Ga0068853_100075476 Ga0068853_1000754762 347
270 3300005547 Ga0070693_100007783 Ga0070693_1000077834 347
271 3300006177 Ga0075362_10075489 Ga0075362_100754892 347
272 3300009177 Ga0105248_10311622 Ga0105248_103116222 347
273 3300013102 Ga0157371_10211593 Ga0157371_102115931 347
274 3300013105 Ga0157369_10193325 Ga0157369_101933252 347
275 3300015261 Ga0182006_1009502 Ga0182006_10095022 347
276 3300015689 Ga0183360_10001 Ga0183360_100012835 347
277 3300025245 Ga0207425_1000311 Ga0207425_100031128 347
278 3300025245 Ga0207425_1017234 Ga0207425_10172341 347
279 3300025258 Ga0209129_1000011 Ga0209129_1000011268 347
280 3300025263 Ga0209565_1000001 Ga0209565_10000011052 347
281 3300025273 Ga0209673_1000001 Ga0209673_10000011052 347
282 3300025291 Ga0209675_1000001 Ga0209675_10000011482 347
283 3300025294 Ga0209025_1000002 Ga0209025_1000002530 347
284 3300025294 Ga0209025_1000006 Ga0209025_1000006135 347
285 3300025295 Ga0209564_1000001 Ga0209564_10000011644 347
286 3300025297 Ga0209758_1000003 Ga0209758_1000003537 347
287 3300025297 Ga0209758_1007074 Ga0209758_10070747 347
288 3300025299 Ga0209256_1000006 Ga0209256_100000680 347
289 3300025304 Ga0209257_1000567 Ga0209257_100056761 347
290 3300025909 Ga0207705_10117365 Ga0207705_101173652 347
291 3300025931 Ga0207644_10019941 Ga0207644_100199413 347
292 3300025972 Ga0207668_10015356 Ga0207668_100153562 347
293 3300026041 Ga0207639_10024923 Ga0207639_100249234 347
294 3300031456 Ga0307513_10018681 Ga0307513_100186816 347
295 3300031548 Ga0307408_100074729 Ga0307408_1000747292 347
296 3300031548 Ga0307408_100211611 Ga0307408_1002116111 347
297 3300031731 Ga0307405_10029660 Ga0307405_100296604 347
298 3300031901 Ga0307406_10003526 Ga0307406_100035262 347
299 3300031911 Ga0307412_10064511 Ga0307412_100645112 347
300 3300031995 Ga0307409_100185523 Ga0307409_1001855231 347
301 3300032004 Ga0307414_10001050 Ga0307414_100010507 347
302 3300032004 Ga0307414_10012778 Ga0307414_100127785 347
303 3300032004 Ga0307414_10033748 Ga0307414_100337484 347
304 3300032004 Ga0307414_10114532 Ga0307414_101145322 347
305 3300037418 Ga0395900_0029103 Ga0395900_0029103_3160_4227 347
306 3300037466 Ga0395898_0141766 Ga0395898_0141766_1196_2266 347
307 3300037471 Ga0395905_0000745 Ga0395905_0000745_27715_28782 347
308 3300037471 Ga0395905_0015505 Ga0395905_0015505_6021_7091 347
309 3300038705 Ga0237819_00010 Ga0237819_00010_63210_64268 347
310 3300041407 Ga0439447_000639 Ga0439447_000639_7578_8648 347
311 3300041413 Ga0439465_0000919 Ga0439465_0000919_1568_2614 347
312 3300041494 Ga0451837_1132121 Ga0451837_1132121_115_1257 347
313 3300041509 Ga0451843_1675044 Ga0451843_1675044_812_1858 347
314 3300042006 Ga0439432_002626 Ga0439432_002626_4139_5212 347
315 3300042006 Ga0439432_026869 Ga0439432_026869_584_1660 347
316 3300042007 Ga0439449_0059626 Ga0439449_0059626_52_1098 347
317 3300044712 Ga0453684_0006590 Ga0453684_0006590_16476_17546 347
318 3300045051 Ga0451576_0000042 Ga0451576_0000042_225488_226558 347
319 3300046513 Ga0495616_0008299 Ga0495616_0008299_3464_4516 347
320 3300046530 Ga0495654_0098244 Ga0495654_0098244_241_1287 347
321 3300046558 Ga0495633_0008257 Ga0495633_0008257_2411_3454 347
322 3300046615 Ga0495656_0006231 Ga0495656_0006231_2691_3761 347
323 3300046616 Ga0495668_0008077 Ga0495668_0008077_3913_4983 347
324 3300046692 Ga0495671_0047211 Ga0495671_0047211_35_1081 347
325 3300047318 Ga0495636_0011615 Ga0495636_0011615_2057_3127 347
326 3300047472 Ga0495686_0012990 Ga0495686_0012990_2640_3692 347
327 3300048911 Ga0496108_0171869 Ga0496108_0171869_276_1343 347
328 3300048915 Ga0496112_0100666 Ga0496112_0100666_510_1577 347
329 3300048916 Ga0496113_0072422 Ga0496113_0072422_893_1960 347
330 3300048924 Ga0496121_0007461 Ga0496121_0007461_10470_11540 347
331 3300048925 Ga0496122_0000772 Ga0496122_0000772_41662_42711 347
332 3300048925 Ga0496122_0031660 Ga0496122_0031660_3104_4150 347
333 3300048926 Ga0496123_0000613 Ga0496123_0000613_10941_11990 347
334 3300048927 Ga0496124_0232131 Ga0496124_0232131_229_1296 347
335 3300048928 Ga0496125_0044735 Ga0496125_0044735_167_1222 347
336 3300049570 Ga0501033_0001518 Ga0501033_0001518_5948_7114 347
337 3300049570 Ga0501033_0046293 Ga0501033_0046293_1205_2296 347
338 3300049571 Ga0501034_0000513 Ga0501034_0000513_58743_59807 347
339 3300049573 Ga0501037_0094182 Ga0501037_0094182_258_1349 347
340 3300049574 Ga0501038_0012654 Ga0501038_0012654_2313_3404 347
341 3300049579 Ga0501043_0004602 Ga0501043_0004602_8103_9194 347
342 3300049581 Ga0501047_0052406 Ga0501047_0052406_1108_2199 347
343 3300049586 Ga0501070_0081937 Ga0501070_0081937_19_1110 347
344 3300049663 Ga0501223_007314 Ga0501223_007314_1061_2134 347
345 3300049822 Ga0501035_0081313 Ga0501035_0081313_1348_2439 347
346 3300049823 Ga0501044_0006633 Ga0501044_0006633_6541_7632 347
347 3300053161 Ga0500634_0000178 Ga0500634_0000178_14270_15313 347
348 2162886007 SwRhRL2b_contig_437430 SwRhRL2b_0289.00002720 349
349 3300003856 Ga0058692_1000032 Ga0058692_1000032102 349
350 3300003856 Ga0058692_1000107 Ga0058692_100010757 349
351 3300005289 Ga0065704_10086549 Ga0065704_100865495 349
352 3300005331 Ga0070670_100005468 Ga0070670_1000054684 349
353 3300005347 Ga0070668_100048978 Ga0070668_1000489784 349
354 3300005456 Ga0070678_100035902 Ga0070678_1000359024 349
355 3300009011 Ga0105251_10001430 Ga0105251_1000143013 349
356 3300009148 Ga0105243_10003698 Ga0105243_100036987 349
357 3300013102 Ga0157371_10011529 Ga0157371_100115291 349
358 3300013102 Ga0157371_10050401 Ga0157371_100504011 349
359 3300013104 Ga0157370_10127980 Ga0157370_101279803 349
360 3300015265 Ga0182005_1001840 Ga0182005_10018406 349
361 3300025735 Ga0207713_1011905 Ga0207713_10119052 349
362 3300025923 Ga0207681_10261362 Ga0207681_102613622 349
363 3300025925 Ga0207650_10012465 Ga0207650_100124657 349
364 3300025935 Ga0207709_10004394 Ga0207709_100043948 349
365 3300027312 Ga0209371_1000055 Ga0209371_100005572 349
366 3300030500 Ga0268256_1000054 Ga0268256_1000054162 349
367 3300039145 Ga0237816_00203 Ga0237816_00203_2336_3397 349
368 3300046501 Ga0495607_0033701 Ga0495607_0033701_158_1219 349
369 3300046507 Ga0495606_0025538 Ga0495606_0025538_3120_4181 349
370 3300046525 Ga0495663_0002691 Ga0495663_0002691_3841_4935 349
371 3300046558 Ga0495633_0004565 Ga0495633_0004565_919_2013 349
372 3300048920 Ga0496117_0002569 Ga0496117_0002569_3174_4223 349
373 3300048921 Ga0496118_0025437 Ga0496118_0025437_79_1128 349
374 3300048922 Ga0496119_0002512 Ga0496119_0002512_4093_5142 349
375 3300048923 Ga0496120_0000988 Ga0496120_0000988_33588_34637 349
376 3300048925 Ga0496122_0003606 Ga0496122_0003606_14898_15947 349
377 3300048926 Ga0496123_0000417 Ga0496123_0000417_14892_15941 349
378 3300048927 Ga0496124_0002325 Ga0496124_0002325_20254_21303 349
379 3300049705 Ga0501225_0004876 Ga0501225_0004876_444_1535 349
380 iso_pu_bacteria 8002869464 8002871362 349
381 iso_pu_bacteria 8003014200 8003015077 349
382 iso_pu_bacteria 8021626552 8021628187 349
383 iso_pu_bacteria 8021648035 8021651401 349
384 2162886007 SwRhRL2b_contig_332428 SwRhRL2b_0325.00005870 350
385 3300003781 Ga0055536_1002665 Ga0055536_10026655 350
386 3300005289 Ga0065704_10072772 Ga0065704_100727725 350
387 3300013308 Ga0157375_10012392 Ga0157375_100123923 350
388 3300025292 Ga0209676_1000436 Ga0209676_100043667 350
389 3300025304 Ga0209257_1001357 Ga0209257_100135720 350
390 3300025925 Ga0207650_10019618 Ga0207650_100196183 350
391 3300025931 Ga0207644_10123626 Ga0207644_101236262 350
392 3300041453 Ga0451797_0549835 Ga0451797_0549835_94_1182 350
393 3300041494 Ga0451837_1022148 Ga0451837_1022148_35_1123 350
394 3300042007 Ga0439449_0000060 Ga0439449_0000060_2460_3593 350
395 3300046525 Ga0495663_0004164 Ga0495663_0004164_2951_4066 350
396 3300046537 Ga0495598_0000904 Ga0495598_0000904_2021_3157 350
397 3300048917 Ga0496114_0002827 Ga0496114_0002827_2411_3463 350
398 3300048926 Ga0496123_0014546 Ga0496123_0014546_3529_4593 350
399 3300049571 Ga0501034_0001257 Ga0501034_0001257_9254_10306 350

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21239

RLMM_N

Ribosomal RNA large subunit methyltransferase M, N-terminal

106

183

0.96

PF18125

RlmM_FDX

RlmM ferredoxin-like domain

26

93

0.92

PF01728

FtsJ

FtsJ-like methyltransferase

205

311

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
4auk-assembly2.cif.gz_B crystal structure of c2498 2'-o-ribose methyltransferase rlmm from escherichia coli 0.9655 4 348
4b17-assembly1.cif.gz_A-2 crystal structure of c2498 2'-o-ribose methyltransferase rlmm from escherichia coli in complex with s-adenosylmethionine 0.9543 4 348
4auk-assembly2.cif.gz_B crystal structure of c2498 2'-o-ribose methyltransferase rlmm from escherichia coli 0.9493 4 348
4b17-assembly1.cif.gz_A-2 crystal structure of c2498 2'-o-ribose methyltransferase rlmm from escherichia coli in complex with s-adenosylmethionine 0.9385 4 348
4zn1-assembly1.cif.gz_A crystal structure of mjspt4:spt5 complex conformation a 0.7592 7 58
ID Description Score Start End Superfamily
af_P0ADR6_176_357_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9823 175 348 3.40.50.150
4b17A02 Alpha Beta;2-Layer Sandwich;THUMP fold; 0.9368 80 174 3.30.2300.20
af_P0ADR6_176_357_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9345 175 348 3.40.50.150
4b17A02 Alpha Beta;2-Layer Sandwich;THUMP fold; 0.9275 80 174 3.30.2300.20
4aukB01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9134 4 70 3.30.70.2810
ID Description Score Start End GO Terms
AF-A0A7J5EUD7-F1-model_v4 23S rRNA (Cytidine(2498)-2'-O)-methyltransferase RlmM (EC 2.1.1.186) 0.9983 1 263 GO:0005737
GO:0008168
GO:0032259
AF-A0A3D5JTV3-F1-model_v4 Ribosomal RNA large subunit methyltransferase M (EC 2.1.1.186) (23S rRNA (cytidine2498-2'-O)-methyltransferase) (23S rRNA 2'-O-ribose methyltransferase RlmM) 0.997 5 326 GO:0005507
GO:0005737
GO:0006364
GO:0008757
GO:0016491
GO:0032259
GO:0042597
AF-A0A427CCX1-F1-model_v4 Ribosomal RNA large subunit methyltransferase M (EC 2.1.1.186) (23S rRNA (cytidine2498-2'-O)-methyltransferase) (23S rRNA 2'-O-ribose methyltransferase RlmM) 0.9965 5 347 GO:0005737
GO:0006364
GO:0008757
GO:0032259
AF-A0A1E7RJQ9-F1-model_v4 Ribosomal RNA large subunit methyltransferase M (EC 2.1.1.186) (23S rRNA (cytidine2498-2'-O)-methyltransferase) (23S rRNA 2'-O-ribose methyltransferase RlmM) 0.9963 5 347 GO:0005737
GO:0006364
GO:0008757
GO:0032259
AF-A0A3C0GRX3-F1-model_v4 23S rRNA (Cytidine(2498)-2'-O)-methyltransferase RlmM 0.9954 5 307 GO:0005737
GO:0008168
GO:0032259

Feature Viewer

pLDDT pTM Quality
94.88 0.91 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map