F429467

General Info

Members Datasets Scaffolds Average Seq Length
383 251 350 176

Family's Representative Sequence

Representative Sequence 3300003316|rootH1_10026918|rootH1_100269186
Length 193
Sequence MPLMTPDDLASDTDRLLLIVEDDDAFARTLSRSFERRGYQVLRATTVEQVQKLLAERGPEESPEYAVVDLKLAGGGSGLACVQTLHEHDAEMVIVVLTGYASIATAVEAIKLGARHYLAKPANTDDIEAAFARAQGDAEVEVTERATTSIKTLEWEHIHETLAATDFNISETARRLGMHRRTLARKLEKQRVK

Samples

Sample ID Description Type Environment
1 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
2 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
3 2643221559 Lysobacter sp. Root559 Isolate Unclassified
4 2643221573 Lysobacter sp. Root604 Isolate Unclassified
5 2643221585 Pelomonas sp. Root662 Isolate Unclassified
6 2643221586 Lysobacter sp. Root667 Isolate Unclassified
7 2643221593 Lysobacter sp. Root690 Isolate Unclassified
8 2643221612 Lysobacter sp. Root76 Isolate Unclassified
9 2643221638 Duganella sp. Root336D2 Isolate Unclassified
10 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
11 2643221656 Pelomonas sp. Root405 Isolate Unclassified
12 2643221720 Lysobacter sp. Root916 Isolate Unclassified
13 2643221727 Lysobacter sp. Root96 Isolate Unclassified
14 2643221728 Lysobacter sp. Root983 Isolate Unclassified
15 2738541307 Variovorax sp. GV008 Isolate Unclassified
16 2738541337 Pelomonas sp. BT06 Isolate Unclassified
17 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
18 2831864461 Roseateles noduli HZ7 Isolate Nodule
19 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
20 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
21 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
22 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
23 2893066018 Tardiphaga sp. P9-11 Isolate Unclassified
24 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
25 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
26 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
27 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
28 2929520902 Variovorax beijingensis 502 Isolate Unclassified
29 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
30 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
31 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
32 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
33 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere
34 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
35 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
36 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
37 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
38 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
39 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
40 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
41 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
42 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
43 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
44 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
45 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
46 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
47 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
48 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
49 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
50 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
51 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
52 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
53 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
54 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
55 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
56 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
57 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
58 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
59 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
60 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
61 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
62 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
63 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
64 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
65 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
66 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
67 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
68 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
69 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
70 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
71 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
74 3300012475 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.old.080610 Metagenome Rhizosphere
75 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
76 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
77 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
78 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
81 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
82 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
83 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
84 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
85 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
89 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
91 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
93 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
106 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
108 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
116 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
117 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
118 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
119 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
120 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
121 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
122 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
123 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
124 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
125 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
126 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
127 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
128 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
129 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
132 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
133 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
134 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
135 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
136 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
137 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
138 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
139 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
140 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
141 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
142 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
143 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
144 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
145 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
146 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
147 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
148 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
149 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
150 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
151 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
152 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
153 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
154 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
155 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
156 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
157 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
158 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
159 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
160 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
161 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
162 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
163 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
164 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
165 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
166 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
167 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
168 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
169 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
170 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
171 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
172 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
173 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
174 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
175 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
176 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
177 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
178 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
179 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
180 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
181 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
182 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
183 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
184 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
185 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
186 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
187 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
188 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
189 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
190 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
191 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
192 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
193 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
194 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
195 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
196 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
197 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
198 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
199 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
200 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
201 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
202 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
203 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
204 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
205 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
206 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
207 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
208 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
209 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
210 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
211 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
212 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
213 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
214 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
215 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
216 3300053089 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 endosphere Metagenome Endosphere
217 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
218 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
219 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
220 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
221 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
222 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
223 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
224 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
225 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
226 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
227 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
228 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
229 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
230 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
231 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
232 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
233 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
234 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
235 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
236 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
237 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
238 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
239 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
240 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
241 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
242 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
243 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
244 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
245 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
246 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
247 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
248 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
249 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
250 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
251 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.86
Metatranscriptomes 0.52
Isolates 8.62

Biome Distribution

Category Percentage (%)
Aerial Root 0.52
Bulb 0
Endosphere 28.72
Nodule 1.57
Rhizoplane 1.31
Rhizosphere 48.56
Stem 0
Stem Tuber 0
Unclassified 19.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1000712 3300002739 Bacteria 6448
2 JGI25151J46595_10000283 3300003187 Bacteria 57989
3 rootH1_10026918 3300003316 Bacteria 4855
4 rootH2_10148403 3300003320 Bacteria 1287
5 rootH1_10020306 3300003323 Bacteria 16958
6 JGI25161J50226_1013977 3300003374 Bacteria 912
7 Ga0006562J51391_1044286 3300003578 Bacteria 5190
8 Ga0006562J51391_1044290 3300003578 Bacteria 1190
9 Ga0055526_1000006 3300003771 Bacteria 330857
10 Ga0055526_1007200 3300003771 Bacteria 5844
11 Ga0055526_1021336 3300003771 Bacteria 2257
12 Ga0055537_1000003 3300003773 Bacteria 220933
13 Ga0055537_1019933 3300003773 Bacteria 1030
14 Ga0055524_1000009 3300003775 Bacteria 295254
15 Ga0055524_1000159 3300003775 Bacteria 78586
16 Ga0055524_1000762 3300003775 Bacteria 21684
17 Ga0055524_1007093 3300003775 Bacteria 4804
18 Ga0055534_1000004 3300003784 Bacteria 295251
19 Ga0055528_1000003 3300003790 Bacteria 330875
20 Ga0055530_10012457 3300003791 Bacteria 2963
21 Ga0055531_10000322 3300003794 Bacteria 47122
22 Ga0055531_10003973 3300003794 Bacteria 9174
23 Ga0055543_1001100 3300004625 Bacteria 11684
24 Ga0065165_1000101 3300005262 Bacteria 141486
25 Ga0065165_1000836 3300005262 Bacteria 40452
26 Ga0070658_10416223 3300005327 Bacteria 1155
27 Ga0070668_100365030 3300005347 Bacteria 1225
28 Ga0070708_100608897 3300005445 Bacteria 1030
29 Ga0070663_100003223 3300005455 Bacteria 9380
30 Ga0070663_100838276 3300005455 Bacteria 790
31 Ga0070678_100160274 3300005456 Bacteria 1822
32 Ga0070662_100031838 3300005457 Bacteria 3704
33 Ga0070706_100759311 3300005467 Bacteria 898
34 Ga0068857_100029181 3300005577 Bacteria 4868
35 Ga0068852_100044567 3300005616 Bacteria 3768
36 Ga0068852_100115481 3300005616 Bacteria 2447
37 Ga0068862_100241069 3300005844 Bacteria 1644
38 Ga0075364_10000141 3300006051 Bacteria 31242
39 Ga0075364_10131373 3300006051 Bacteria 1681
40 Ga0075364_10505522 3300006051 Bacteria 826
41 Ga0075369_10321086 3300006186 Bacteria 724
42 Ga0075366_10147362 3300006195 Bacteria 1425
43 Ga0075370_10173600 3300006353 Bacteria 1267
44 Ga0099823_1000478 3300006944 Bacteria 26702
45 Ga0079104_1017192 3300006946 Bacteria 2087
46 Ga0079104_1017696 3300006946 Bacteria 2043
47 Ga0099826_10175756 3300006948 Bacteria 1197
48 Ga0105240_10237587 3300009093 Bacteria 2114
49 Ga0105240_10792501 3300009093 Bacteria 1027
50 Ga0105245_11089411 3300009098 Bacteria 845
51 Ga0105243_10912529 3300009148 Bacteria 874
52 Ga0105242_10919653 3300009176 Bacteria 876
53 Ga0105237_10011346 3300009545 Bacteria 9428
54 Ga0105237_10523468 3300009545 Bacteria 1192
55 Ga0105237_11592552 3300009545 Bacteria 660
56 Ga0105238_10266879 3300009551 Bacteria 1692
57 Ga0105238_10351172 3300009551 Bacteria 1464
58 Ga0105239_10051645 3300010375 Bacteria 4506
59 Ga0157317_1009630 3300012475 Bacteria 727
60 Ga0157319_1000008 3300012497 Bacteria 315600
61 Ga0157373_10420752 3300013100 Bacteria 959
62 Ga0157369_10022568 3300013105 Bacteria 7019
63 Ga0182008_10010443 3300014497 Bacteria 4968
64 Ga0182008_10221057 3300014497 Bacteria 969
65 Ga0157376_10034806 3300014969 Bacteria 4070
66 Ga0183360_10001 3300015689 Bacteria 3943671
67 Ga0183363_1006 3300015690 Bacteria 400466
68 Ga0183361_14228 3300016635 Bacteria 784
69 Ga0213872_10000871 3300021361 Bacteria 21851
70 Ga0213872_10002369 3300021361 Bacteria 11163
71 Ga0207425_1001810 3300025245 Bacteria 8283
72 Ga0209565_1000001 3300025263 Bacteria 2950419
73 Ga0209565_1006161 3300025263 Bacteria 3397
74 Ga0209673_1000001 3300025273 Bacteria 3176258
75 Ga0209673_1005928 3300025273 Bacteria 6031
76 Ga0209673_1019601 3300025273 Bacteria 2423
77 Ga0209673_1034591 3300025273 Bacteria 1524
78 Ga0209673_1038592 3300025273 Bacteria 1388
79 Ga0209675_1000001 3300025291 Bacteria 2950293
80 Ga0209025_1000005 3300025294 Bacteria 1272149
81 Ga0209564_1000001 3300025295 Bacteria 3176258
82 Ga0209564_1000008 3300025295 Bacteria 953227
83 Ga0209564_1005534 3300025295 Bacteria 7156
84 Ga0209758_1031130 3300025297 Bacteria 2195
85 Ga0209050_1002935 3300025298 Bacteria 13344
86 Ga0209050_1003178 3300025298 Bacteria 12485
87 Ga0209256_1000002 3300025299 Bacteria 1906740
88 Ga0209256_1001049 3300025299 Bacteria 32147
89 Ga0209256_1002027 3300025299 Bacteria 18044
90 Ga0209256_1010133 3300025299 Bacteria 4003
91 Ga0209051_1000244 3300025303 Bacteria 91505
92 Ga0209051_1004282 3300025303 Bacteria 8877
93 Ga0209051_1006123 3300025303 Bacteria 6838
94 Ga0209257_1000017 3300025304 Bacteria 866287
95 Ga0209257_1000144 3300025304 Bacteria 197078
96 Ga0209257_1002056 3300025304 Bacteria 21322
97 Ga0209257_1008974 3300025304 Bacteria 5494
98 Ga0207695_10391840 3300025913 Bacteria 1274
99 Ga0207695_10399694 3300025913 Bacteria 1258
100 Ga0207671_10061136 3300025914 Bacteria 2795
101 Ga0207671_10416743 3300025914 Bacteria 1069
102 Ga0207671_10433433 3300025914 Bacteria 1046
103 Ga0207687_11034453 3300025927 Bacteria 705
104 Ga0207664_11252773 3300025929 Bacteria 661
105 Ga0207709_10009129 3300025935 Bacteria 5466
106 Ga0207709_10700324 3300025935 Bacteria 810
107 Ga0207667_10045619 3300025949 Bacteria 4641
108 Ga0207677_10160954 3300026023 Bacteria 1744
109 Ga0207678_10007653 3300026067 Bacteria 9541
110 Ga0207674_10197394 3300026116 Bacteria 1962
111 Ga0207674_10519055 3300026116 Bacteria 1151
112 Ga0207698_10563541 3300026142 Bacteria 1118
113 Ga0209389_1020739 3300027296 Bacteria 5862
114 Ga0209371_1020801 3300027312 Bacteria 1607
115 Ga0307515_10003698 3300028794 Bacteria 32116
116 Ga0307515_10467034 3300028794 Bacteria 875
117 Ga0268256_1023343 3300030500 Bacteria 1607
118 Ga0307408_100003096 3300031548 Bacteria 11457
119 Ga0307408_100003784 3300031548 Bacteria 10304
120 Ga0307408_100111464 3300031548 Bacteria 2102
121 Ga0307408_100182433 3300031548 Bacteria 1684
122 Ga0307408_100388909 3300031548 Bacteria 1194
123 Ga0307516_10001568 3300031730 Bacteria 31474
124 Ga0307406_10002366 3300031901 Bacteria 10259
125 Ga0307406_10015724 3300031901 Bacteria 4385
126 Ga0307406_10026676 3300031901 Bacteria 3472
127 Ga0307412_10002183 3300031911 Bacteria 10861
128 Ga0307412_10569590 3300031911 Bacteria 954
129 Ga0307416_100015496 3300032002 Bacteria 5268
130 Ga0307414_11227123 3300032004 Bacteria 695
131 Ga0307510_10008747 3300033180 Bacteria 12065
132 Ga0373948_0003400 3300034817 Bacteria 2445
133 Ga0373950_0007031 3300034818 Bacteria 1735
134 Ga0373940_0004659 3300035088 Bacteria 2913
135 Ga0373949_0029251 3300035090 Bacteria 1304
136 Ga0373951_0008516 3300035091 Bacteria 2313
137 Ga0373939_0000071 3300035114 Bacteria 32243
138 Ga0373941_0319674 3300035115 Bacteria 624
139 Ga0373960_0001450 3300035121 Bacteria 5245
140 Ga0373962_0005185 3300035242 Bacteria 3151
141 Ga0373931_0000591 3300035691 Bacteria 14952
142 Ga0395899_0031355 3300037312 Bacteria 3994
143 Ga0395899_0042126 3300037312 Bacteria 3409
144 Ga0395899_0063689 3300037312 Bacteria 2712
145 Ga0395900_0000584 3300037418 Bacteria 50170
146 Ga0395900_0006598 3300037418 Bacteria 12074
147 Ga0395900_0046108 3300037418 Bacteria 4489
148 Ga0395900_0272585 3300037418 Bacteria 1686
149 Ga0395900_0394461 3300037418 Bacteria 1349
150 Ga0395900_0470407 3300037418 Bacteria 1210
151 Ga0395898_0004694 3300037466 Bacteria 14873
152 Ga0395898_0041512 3300037466 Bacteria 4544
153 Ga0395898_0082717 3300037466 Bacteria 3094
154 Ga0395905_0000033 3300037471 Bacteria 279363
155 Ga0395905_0008625 3300037471 Bacteria 10043
156 Ga0395905_0027233 3300037471 Bacteria 5390
157 Ga0395905_0214333 3300037471 Bacteria 1803
158 Ga0395905_0230100 3300037471 Bacteria 1733
159 Ga0395905_0713633 3300037471 Bacteria 905
160 Ga0395901_0068240 3300038443 Bacteria 3704
161 Ga0395901_0094639 3300038443 Bacteria 3130
162 Ga0395901_0134203 3300038443 Bacteria 2601
163 Ga0237819_00145 3300038705 Bacteria 26084
164 Ga0237816_01314 3300039145 Bacteria 2008
165 Ga0436361_0254808 3300039447 Bacteria 14252
166 Ga0439436_0005309 3300041404 Bacteria 3950
167 Ga0439436_0016041 3300041404 Bacteria 2250
168 Ga0439439_0000199 3300041406 Bacteria 9189
169 Ga0439447_001523 3300041407 Bacteria 8482
170 Ga0451795_1579287 3300041456 Bacteria 774
171 Ga0439445_0002739 3300042004 Bacteria 3931
172 Ga0439449_0006093 3300042007 Bacteria 4610
173 Ga0439462_0020011 3300042015 Bacteria 1744
174 Ga0450890_017277 3300042127 Bacteria 960
175 Ga0450903_011126 3300042138 Bacteria 1452
176 Ga0439446_0154987 3300042156 Bacteria 755
177 Ga0439464_0033263 3300042439 Bacteria 1451
178 Ga0466969_0000007 3300044656 Bacteria 152114
179 Ga0466969_0118904 3300044656 Bacteria 1231
180 Ga0466969_0147841 3300044656 Bacteria 1083
181 Ga0466965_0022237 3300044683 Bacteria 3057
182 Ga0466966_0048990 3300044684 Bacteria 2690
183 Ga0466966_0233096 3300044684 Bacteria 1110
184 Ga0466961_0164143 3300044693 Bacteria 1383
185 Ga0466963_0036037 3300044694 Bacteria 3224
186 Ga0466963_0149038 3300044694 Bacteria 1624
187 Ga0466964_0149798 3300044706 Bacteria 1080
188 Ga0453684_0039136 3300044712 Bacteria 6468
189 Ga0466971_0004508 3300044719 Bacteria 6021
190 Ga0466971_0021642 3300044719 Bacteria 2861
191 Ga0466968_0231363 3300044735 Bacteria 873
192 Ga0466970_0087618 3300044765 Bacteria 1688
193 Ga0466957_0131583 3300044842 Bacteria 1603
194 Ga0466957_0152550 3300044842 Bacteria 1495
195 Ga0466959_0030586 3300045049 Bacteria 3987
196 Ga0466959_0189094 3300045049 Bacteria 1437
197 Ga0451576_0814422 3300045051 Bacteria 980
198 Ga0466958_0027239 3300045836 Bacteria 3382
199 Ga0495627_005312 3300046453 Bacteria 5216
200 Ga0495629_0182079 3300046459 Bacteria 1456
201 Ga0495638_0046793 3300046460 Bacteria 2716
202 Ga0495638_0093116 3300046460 Bacteria 1813
203 Ga0495607_0085144 3300046501 Bacteria 1727
204 Ga0495583_0040590 3300046506 Bacteria 2185
205 Ga0495583_0068896 3300046506 Bacteria 1559
206 Ga0495610_0025838 3300046512 Bacteria 3144
207 Ga0495610_0206711 3300046512 Bacteria 800
208 Ga0495616_0002555 3300046513 Bacteria 12003
209 Ga0495616_0023562 3300046513 Bacteria 3310
210 Ga0495620_0054278 3300046515 Bacteria 1693
211 Ga0495631_0001479 3300046518 Bacteria 14247
212 Ga0495631_0134441 3300046518 Bacteria 1062
213 Ga0495632_0330523 3300046519 Bacteria 672
214 Ga0495637_0018539 3300046520 Bacteria 3226
215 Ga0495637_0036407 3300046520 Bacteria 2144
216 Ga0495643_0140392 3300046522 Bacteria 1205
217 Ga0495648_0035010 3300046524 Bacteria 3260
218 Ga0495654_0032650 3300046530 Bacteria 2638
219 Ga0495609_0155910 3300046538 Bacteria 970
220 Ga0495622_0025318 3300046557 Bacteria 2772
221 Ga0495622_0218756 3300046557 Bacteria 844
222 Ga0495668_0000550 3300046616 Bacteria 46380
223 Ga0495611_0119284 3300046648 Bacteria 1230
224 Ga0495625_0011807 3300046660 Bacteria 7095
225 Ga0495625_0121772 3300046660 Bacteria 1774
226 Ga0495661_0015343 3300046665 Bacteria 5114
227 Ga0495588_0043445 3300046674 Bacteria 2300
228 Ga0495588_0192776 3300046674 Bacteria 1076
229 Ga0495658_0018702 3300046683 Bacteria 3606
230 Ga0495613_0715767 3300046689 Bacteria 658
231 Ga0495624_0150274 3300046690 Bacteria 1425
232 Ga0495670_0009017 3300046691 Bacteria 4907
233 Ga0495670_0011840 3300046691 Bacteria 4294
234 Ga0495670_0050058 3300046691 Bacteria 2091
235 Ga0495671_0196210 3300046692 Bacteria 979
236 Ga0495660_0078603 3300046810 Bacteria 1734
237 Ga0495676_0018298 3300047321 Bacteria 6177
238 Ga0495681_0280936 3300047470 Bacteria 649
239 Ga0495686_0045171 3300047472 Bacteria 2787
240 Ga0495686_0053890 3300047472 Bacteria 2519
241 Ga0495602_0354136 3300048088 Bacteria 1059
242 Ga0495614_0013561 3300048089 Bacteria 3573
243 Ga0495626_0028202 3300048091 Bacteria 2724
244 Ga0496109_0615625 3300048912 Bacteria 1022
245 Ga0496111_0559133 3300048914 Bacteria 839
246 Ga0496116_0002755 3300048919 Bacteria 18052
247 Ga0496116_0245417 3300048919 Bacteria 896
248 Ga0496117_0005379 3300048920 Bacteria 13482
249 Ga0496117_0016813 3300048920 Bacteria 6147
250 Ga0496117_0049683 3300048920 Bacteria 2980
251 Ga0496117_0175434 3300048920 Bacteria 1239
252 Ga0496118_0034409 3300048921 Bacteria 4134
253 Ga0496118_0039724 3300048921 Bacteria 3751
254 Ga0496118_0057396 3300048921 Bacteria 2918
255 Ga0496119_0035639 3300048922 Bacteria 3257
256 Ga0496119_0067582 3300048922 Bacteria 2107
257 Ga0496119_0227713 3300048922 Bacteria 951
258 Ga0496120_0054783 3300048923 Bacteria 2258
259 Ga0496121_0023471 3300048924 Bacteria 5939
260 Ga0496121_0032327 3300048924 Bacteria 4758
261 Ga0496121_0060693 3300048924 Bacteria 3108
262 Ga0496121_0129013 3300048924 Bacteria 1896
263 Ga0496122_0001280 3300048925 Bacteria 41824
264 Ga0496122_0008505 3300048925 Bacteria 11049
265 Ga0496122_0019225 3300048925 Bacteria 6251
266 Ga0496122_0086072 3300048925 Bacteria 2165
267 Ga0496122_0146806 3300048925 Bacteria 1464
268 Ga0496122_0181174 3300048925 Bacteria 1256
269 Ga0496123_0000643 3300048926 Bacteria 58206
270 Ga0496123_0010288 3300048926 Bacteria 8299
271 Ga0496123_0011944 3300048926 Bacteria 7455
272 Ga0496123_0022139 3300048926 Bacteria 4909
273 Ga0496123_0082106 3300048926 Bacteria 1955
274 Ga0496123_0083926 3300048926 Bacteria 1924
275 Ga0496124_0000204 3300048927 Bacteria 116976
276 Ga0496124_0005515 3300048927 Bacteria 14203
277 Ga0496124_0006356 3300048927 Bacteria 12894
278 Ga0496124_0039398 3300048927 Bacteria 4096
279 Ga0496124_0048144 3300048927 Bacteria 3645
280 Ga0496124_0089028 3300048927 Bacteria 2521
281 Ga0496124_0137179 3300048927 Bacteria 1935
282 Ga0496124_0489916 3300048927 Bacteria 827
283 Ga0496125_0002477 3300048928 Bacteria 23956
284 Ga0496125_0013644 3300048928 Bacteria 7975
285 Ga0496125_0063550 3300048928 Bacteria 2943
286 Ga0496126_0006650 3300048929 Bacteria 12865
287 Ga0496126_0267209 3300048929 Bacteria 1420
288 Ga0495678_004484 3300049459 Bacteria 8065
289 Ga0501031_0000466 3300049568 Bacteria 23480
290 Ga0501034_0000147 3300049571 Bacteria 132629
291 Ga0501047_0074940 3300049581 Bacteria 3257
292 nmdc:mga00v17_14725_c1 3300050491 Bacteria 4374
293 nmdc:mga0yw44_227163_c1 3300050492 Bacteria 1238
294 nmdc:mga0yw44_74188_c1 3300050492 Bacteria 2119
295 nmdc:mga0k408_360407_c1 3300050493 Bacteria 866
296 nmdc:mga07m45_51206_c1 3300050496 Bacteria 2328
297 nmdc:mga07m45_530125_c1 3300050496 Bacteria 681
298 nmdc:mga0sz30_76472_c1 3300050516 Bacteria 1445
299 Ga0500610_0364964 3300053079 Bacteria 604
300 Ga0500643_000828 3300053087 Bacteria 19969
301 Ga0500643_024014 3300053087 Bacteria 1941
302 Ga0500581_165077 3300053089 Bacteria 1023
303 Ga0500651_0000054 3300053093 Bacteria 74519
304 Ga0500651_0077339 3300053093 Bacteria 2065
305 Ga0500566_0006293 3300053094 Bacteria 7054
306 Ga0500566_0024702 3300053094 Bacteria 3526
307 Ga0500641_0010682 3300053096 Bacteria 3322
308 Ga0500650_0006403 3300053098 Bacteria 4489
309 Ga0500556_0000006 3300053104 Bacteria 453982
310 Ga0500571_000056 3300053110 Bacteria 35255
311 Ga0500572_024473 3300053111 Bacteria 1630
312 Ga0500592_001579 3300053116 Bacteria 3681
313 Ga0500597_014715 3300053120 Bacteria 2940
314 Ga0500607_148910 3300053121 Bacteria 1088
315 Ga0500608_009284 3300053122 Bacteria 4169
316 Ga0500608_010122 3300053122 Bacteria 4037
317 Ga0500618_004462 3300053125 Bacteria 4468
318 Ga0500618_011427 3300053125 Bacteria 2354
319 Ga0500642_0000004 3300053130 Bacteria 433122
320 Ga0500655_001004 3300053133 Bacteria 5449
321 Ga0500658_0001997 3300053134 Bacteria 7970
322 Ga0500658_0002011 3300053134 Bacteria 7943
323 Ga0500658_0147285 3300053134 Bacteria 1059
324 Ga0500559_0000180 3300053136 Bacteria 50042
325 Ga0500559_0004841 3300053136 Bacteria 6286
326 Ga0500564_167931 3300053138 Bacteria 924
327 Ga0500568_0001637 3300053139 Bacteria 14097
328 Ga0500568_0002782 3300053139 Bacteria 10118
329 Ga0500573_0129433 3300053140 Bacteria 1399
330 Ga0500574_000355 3300053141 Bacteria 5662
331 Ga0500586_007118 3300053145 Bacteria 2964
332 Ga0500588_0060805 3300053146 Bacteria 1210
333 Ga0500590_039130 3300053148 Bacteria 2445
334 Ga0500604_0001546 3300053151 Bacteria 6439
335 Ga0500616_0000022 3300053153 Bacteria 460463
336 Ga0500616_0052224 3300053153 Bacteria 2150
337 Ga0500622_0000739 3300053156 Bacteria 28518
338 Ga0500622_0011199 3300053156 Bacteria 4894
339 Ga0500624_002907 3300053157 Bacteria 2268
340 Ga0500624_008873 3300053157 Bacteria 1418
341 Ga0500627_0028840 3300053158 Bacteria 2309
342 Ga0500634_0164460 3300053161 Bacteria 1020
343 Ga0500638_004324 3300053162 Bacteria 5449
344 Ga0500636_0005025 3300053177 Bacteria 7506
345 Ga0500636_0010911 3300053177 Bacteria 5311
346 Ga0500637_0060581 3300053178 Bacteria 2168
347 Ga0500567_053078 3300053723 Bacteria 1846
348 Ga0500645_019204 3300053730 Bacteria 2128
349 Ga0466962_0002603 3300061719 Bacteria 8573
350 Ga0466962_0098188 3300061719 Bacteria 1405

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053178 Ga0500637_0060581 Ga0500637_0060581_1715_2158 147
2 3300005445 Ga0070708_100608897 Ga0070708_1006088972 153
3 3300049459 Ga0495678_004484 Ga0495678_004484_4992_5543 155
4 3300009093 Ga0105240_10792501 Ga0105240_107925012 156
5 3300009551 Ga0105238_10266879 Ga0105238_102668792 156
6 3300025913 Ga0207695_10391840 Ga0207695_103918402 156
7 3300025914 Ga0207671_10433433 Ga0207671_104334332 156
8 3300048929 Ga0496126_0006650 Ga0496126_0006650_48_602 156
9 3300003771 Ga0055526_1000006 Ga0055526_1000006225 157
10 3300003773 Ga0055537_1000003 Ga0055537_10000031 157
11 3300003773 Ga0055537_1019933 Ga0055537_10199331 157
12 3300003775 Ga0055524_1000009 Ga0055524_10000091 157
13 3300003784 Ga0055534_1000004 Ga0055534_10000041 157
14 3300003790 Ga0055528_1000003 Ga0055528_100000334 157
15 3300015689 Ga0183360_10001 Ga0183360_100011385 157
16 3300025263 Ga0209565_1000001 Ga0209565_10000012389 157
17 3300025263 Ga0209565_1006161 Ga0209565_10061612 157
18 3300025273 Ga0209673_1000001 Ga0209673_10000012389 157
19 3300025291 Ga0209675_1000001 Ga0209675_1000001141 157
20 3300025295 Ga0209564_1000001 Ga0209564_1000001303 157
21 3300025299 Ga0209256_1000002 Ga0209256_10000021247 157
22 3300003578 Ga0006562J51391_1044286 Ga0006562J51391_10442864 159
23 3300003578 Ga0006562J51391_1044290 Ga0006562J51391_10442902 159
24 3300005616 Ga0068852_100044567 Ga0068852_1000445672 159
25 3300005844 Ga0068862_100241069 Ga0068862_1002410692 159
26 3300006051 Ga0075364_10131373 Ga0075364_101313732 159
27 3300006353 Ga0075370_10173600 Ga0075370_101736002 159
28 3300009093 Ga0105240_10237587 Ga0105240_102375872 159
29 3300009545 Ga0105237_10523468 Ga0105237_105234682 159
30 3300010375 Ga0105239_10051645 Ga0105239_100516454 159
31 3300013105 Ga0157369_10022568 Ga0157369_100225686 159
32 3300014497 Ga0182008_10010443 Ga0182008_100104434 159
33 3300025913 Ga0207695_10399694 Ga0207695_103996942 159
34 3300025914 Ga0207671_10416743 Ga0207671_104167432 159
35 3300025935 Ga0207709_10009129 Ga0207709_100091296 159
36 3300025949 Ga0207667_10045619 Ga0207667_100456196 159
37 3300026142 Ga0207698_10563541 Ga0207698_105635411 159
38 3300031548 Ga0307408_100003784 Ga0307408_1000037845 159
39 3300031901 Ga0307406_10002366 Ga0307406_100023665 159
40 3300046453 Ga0495627_005312 Ga0495627_005312_2203_2748 159
41 3300046460 Ga0495638_0046793 Ga0495638_0046793_2143_2688 159
42 3300046506 Ga0495583_0068896 Ga0495583_0068896_435_980 159
43 3300046512 Ga0495610_0025838 Ga0495610_0025838_1431_1976 159
44 3300046513 Ga0495616_0002555 Ga0495616_0002555_9183_9728 159
45 3300046515 Ga0495620_0054278 Ga0495620_0054278_277_822 159
46 3300046518 Ga0495631_0001479 Ga0495631_0001479_3816_4361 159
47 3300046520 Ga0495637_0018539 Ga0495637_0018539_2662_3207 159
48 3300046557 Ga0495622_0218756 Ga0495622_0218756_217_762 159
49 3300046660 Ga0495625_0121772 Ga0495625_0121772_985_1530 159
50 3300046674 Ga0495588_0192776 Ga0495588_0192776_261_806 159
51 3300046683 Ga0495658_0018702 Ga0495658_0018702_1335_1880 159
52 3300046690 Ga0495624_0150274 Ga0495624_0150274_486_1031 159
53 3300047321 Ga0495676_0018298 Ga0495676_0018298_873_1418 159
54 3300048089 Ga0495614_0013561 Ga0495614_0013561_2960_3505 159
55 3300048919 Ga0496116_0245417 Ga0496116_0245417_144_692 159
56 3300048920 Ga0496117_0175434 Ga0496117_0175434_431_976 159
57 3300048924 Ga0496121_0032327 Ga0496121_0032327_2349_2894 159
58 3300048925 Ga0496122_0019225 Ga0496122_0019225_5102_5647 159
59 3300048925 Ga0496122_0146806 Ga0496122_0146806_632_1177 159
60 3300048926 Ga0496123_0011944 Ga0496123_0011944_3164_3709 159
61 3300048927 Ga0496124_0089028 Ga0496124_0089028_32_577 159
62 3300048927 Ga0496124_0137179 Ga0496124_0137179_343_888 159
63 3300053093 Ga0500651_0000054 Ga0500651_0000054_38507_39052 159
64 3300053094 Ga0500566_0024702 Ga0500566_0024702_2153_2698 159
65 3300053110 Ga0500571_000056 Ga0500571_000056_31095_31640 159
66 3300053111 Ga0500572_024473 Ga0500572_024473_498_1043 159
67 3300053120 Ga0500597_014715 Ga0500597_014715_1736_2281 159
68 3300053133 Ga0500655_001004 Ga0500655_001004_2794_3339 159
69 3300053134 Ga0500658_0001997 Ga0500658_0001997_5095_5640 159
70 3300053134 Ga0500658_0002011 Ga0500658_0002011_2304_2849 159
71 3300053136 Ga0500559_0004841 Ga0500559_0004841_2129_2674 159
72 3300053139 Ga0500568_0002782 Ga0500568_0002782_419_964 159
73 3300053141 Ga0500574_000355 Ga0500574_000355_25_570 159
74 3300053153 Ga0500616_0052224 Ga0500616_0052224_310_855 159
75 3300053157 Ga0500624_002907 Ga0500624_002907_692_1237 159
76 3300053162 Ga0500638_004324 Ga0500638_004324_1160_1705 159
77 3300053177 Ga0500636_0010911 Ga0500636_0010911_2629_3174 159
78 3300050492 nmdc:mga0yw44_227163_c1 nmdc:mga0yw44_227163_c1_344_880 166
79 3300005262 Ga0065165_1000836 Ga0065165_100083620 167
80 3300031901 Ga0307406_10015724 Ga0307406_100157245 169
81 3300003187 JGI25151J46595_10000283 JGI25151J46595_100002837 170
82 3300025245 Ga0207425_1001810 Ga0207425_10018103 170
83 3300025294 Ga0209025_1000005 Ga0209025_1000005828 170
84 3300025297 Ga0209758_1031130 Ga0209758_10311302 170
85 3300031548 Ga0307408_100182433 Ga0307408_1001824331 170
86 3300031901 Ga0307406_10026676 Ga0307406_100266763 170
87 3300041404 Ga0439436_0016041 Ga0439436_0016041_1251_1829 170
88 3300041407 Ga0439447_001523 Ga0439447_001523_6343_6924 170
89 3300046616 Ga0495668_0000550 Ga0495668_0000550_4190_4771 170
90 3300047470 Ga0495681_0280936 Ga0495681_0280936_31_615 170
91 iso_pu_bacteria 2599185359 2600224768 171
92 iso_pu_bacteria 2818991466 2819712961 171
93 iso_pu_bacteria 2879163058 2879164678 171
94 iso_pu_bacteria 2928526807 2928527499 171
95 iso_pu_bacteria 2928968154 2928969012 171
96 3300006051 Ga0075364_10505522 Ga0075364_105055222 173
97 3300034817 Ga0373948_0003400 Ga0373948_0003400_447_1010 173
98 3300034818 Ga0373950_0007031 Ga0373950_0007031_1144_1707 173
99 3300035088 Ga0373940_0004659 Ga0373940_0004659_1421_1984 173
100 3300035090 Ga0373949_0029251 Ga0373949_0029251_324_887 173
101 3300035091 Ga0373951_0008516 Ga0373951_0008516_420_983 173
102 3300035114 Ga0373939_0000071 Ga0373939_0000071_10668_11231 173
103 3300035115 Ga0373941_0319674 Ga0373941_0319674_39_602 173
104 3300035121 Ga0373960_0001450 Ga0373960_0001450_2328_2891 173
105 3300035242 Ga0373962_0005185 Ga0373962_0005185_544_1107 173
106 3300035691 Ga0373931_0000591 Ga0373931_0000591_3761_4324 173
107 3300041456 Ga0451795_1579287 Ga0451795_1579287_84_608 173
108 iso_pu_bacteria 2602042107 2603858706 173
109 iso_pu_bacteria 2857524615 2857526171 173
110 iso_pu_bacteria 2893066018 2893067550 173
111 iso_pu_bacteria 2919073203 2919073979 173
112 3300005577 Ga0068857_100029181 Ga0068857_1000291812 174
113 3300009148 Ga0105243_10912529 Ga0105243_109125292 174
114 3300009545 Ga0105237_10011346 Ga0105237_100113466 174
115 3300025914 Ga0207671_10061136 Ga0207671_100611362 174
116 3300025935 Ga0207709_10700324 Ga0207709_107003242 174
117 3300026116 Ga0207674_10197394 Ga0207674_101973942 174
118 3300031911 Ga0307412_10002183 Ga0307412_100021837 174
119 3300033180 Ga0307510_10008747 Ga0307510_100087472 174
120 3300044735 Ga0466968_0231363 Ga0466968_0231363_196_729 174
121 3300048914 Ga0496111_0559133 Ga0496111_0559133_149_682 174
122 3300048920 Ga0496117_0016813 Ga0496117_0016813_3914_4441 174
123 3300048921 Ga0496118_0039724 Ga0496118_0039724_1893_2420 174
124 3300048924 Ga0496121_0023471 Ga0496121_0023471_1559_2086 174
125 3300048925 Ga0496122_0001280 Ga0496122_0001280_38340_38873 174
126 3300048925 Ga0496122_0086072 Ga0496122_0086072_1117_1644 174
127 3300048926 Ga0496123_0000643 Ga0496123_0000643_24862_25395 174
128 3300048926 Ga0496123_0010288 Ga0496123_0010288_1149_1676 174
129 3300048926 Ga0496123_0082106 Ga0496123_0082106_912_1439 174
130 3300048927 Ga0496124_0000204 Ga0496124_0000204_43368_43895 174
131 3300048927 Ga0496124_0005515 Ga0496124_0005515_3549_4076 174
132 3300048927 Ga0496124_0006356 Ga0496124_0006356_3974_4501 174
133 3300053087 Ga0500643_000828 Ga0500643_000828_4303_4833 174
134 iso_pu_bacteria 2643221559 2643818597 174
135 iso_pu_bacteria 2643221573 2643880516 174
136 iso_pu_bacteria 2643221586 2643938272 174
137 iso_pu_bacteria 2643221612 2644078906 174
138 iso_pu_bacteria 2643221638 2644215715 174
139 iso_pu_bacteria 2643221720 2644661085 174
140 iso_pu_bacteria 2643221727 2644693683 174
141 iso_pu_bacteria 2643221728 2644699162 174
142 iso_pu_bacteria 3000865235 3000868075 174
143 3300015690 Ga0183363_1006 Ga0183363_1006207 175
144 3300016635 Ga0183361_14228 Ga0183361_142281 175
145 3300046691 Ga0495670_0011840 Ga0495670_0011840_3541_4074 175
146 3300053138 Ga0500564_167931 Ga0500564_167931_379_909 175
147 iso_pu_bacteria 2990265787 2990268150 175
148 iso_pu_bacteria 2993693658 2993696825 175
149 3300003771 Ga0055526_1021336 Ga0055526_10213362 176
150 3300005347 Ga0070668_100365030 Ga0070668_1003650302 176
151 3300005455 Ga0070663_100838276 Ga0070663_1008382761 176
152 3300006186 Ga0075369_10321086 Ga0075369_103210862 176
153 3300025295 Ga0209564_1005534 Ga0209564_10055347 176
154 3300025929 Ga0207664_11252773 Ga0207664_112527731 176
155 3300046501 Ga0495607_0085144 Ga0495607_0085144_297_830 176
156 3300046506 Ga0495583_0040590 Ga0495583_0040590_1125_1658 176
157 3300046512 Ga0495610_0206711 Ga0495610_0206711_182_715 176
158 3300046513 Ga0495616_0023562 Ga0495616_0023562_1484_2017 176
159 3300046518 Ga0495631_0134441 Ga0495631_0134441_92_625 176
160 3300046519 Ga0495632_0330523 Ga0495632_0330523_106_639 176
161 3300046520 Ga0495637_0036407 Ga0495637_0036407_738_1271 176
162 3300046522 Ga0495643_0140392 Ga0495643_0140392_480_1013 176
163 3300046524 Ga0495648_0035010 Ga0495648_0035010_739_1272 176
164 3300046530 Ga0495654_0032650 Ga0495654_0032650_2052_2585 176
165 3300046538 Ga0495609_0155910 Ga0495609_0155910_321_854 176
166 3300046557 Ga0495622_0025318 Ga0495622_0025318_911_1444 176
167 3300046648 Ga0495611_0119284 Ga0495611_0119284_448_981 176
168 3300046660 Ga0495625_0011807 Ga0495625_0011807_2324_2857 176
169 3300046665 Ga0495661_0015343 Ga0495661_0015343_996_1529 176
170 3300046674 Ga0495588_0043445 Ga0495588_0043445_341_874 176
171 3300046689 Ga0495613_0715767 Ga0495613_0715767_114_647 176
172 3300046691 Ga0495670_0009017 Ga0495670_0009017_2052_2585 176
173 3300046692 Ga0495671_0196210 Ga0495671_0196210_386_919 176
174 3300046810 Ga0495660_0078603 Ga0495660_0078603_438_971 176
175 3300047472 Ga0495686_0045171 Ga0495686_0045171_589_1122 176
176 3300048088 Ga0495602_0354136 Ga0495602_0354136_328_861 176
177 3300048091 Ga0495626_0028202 Ga0495626_0028202_785_1318 176
178 3300048919 Ga0496116_0002755 Ga0496116_0002755_13361_13894 176
179 3300048920 Ga0496117_0005379 Ga0496117_0005379_8996_9529 176
180 3300048920 Ga0496117_0049683 Ga0496117_0049683_65_598 176
181 3300048921 Ga0496118_0034409 Ga0496118_0034409_1159_1692 176
182 3300048921 Ga0496118_0057396 Ga0496118_0057396_1111_1644 176
183 3300048922 Ga0496119_0035639 Ga0496119_0035639_659_1192 176
184 3300048922 Ga0496119_0067582 Ga0496119_0067582_778_1311 176
185 3300048923 Ga0496120_0054783 Ga0496120_0054783_1302_1835 176
186 3300048924 Ga0496121_0060693 Ga0496121_0060693_2505_3038 176
187 3300048925 Ga0496122_0008505 Ga0496122_0008505_269_802 176
188 3300048925 Ga0496122_0181174 Ga0496122_0181174_37_570 176
189 3300048926 Ga0496123_0022139 Ga0496123_0022139_750_1283 176
190 3300048926 Ga0496123_0083926 Ga0496123_0083926_1216_1749 176
191 3300048927 Ga0496124_0048144 Ga0496124_0048144_438_971 176
192 3300048927 Ga0496124_0489916 Ga0496124_0489916_200_733 176
193 3300048928 Ga0496125_0002477 Ga0496125_0002477_18961_19494 176
194 3300048928 Ga0496125_0013644 Ga0496125_0013644_4251_4784 176
195 3300048929 Ga0496126_0267209 Ga0496126_0267209_584_1117 176
196 3300050491 nmdc:mga00v17_14725_c1 nmdc:mga00v17_14725_c1_2681_3214 176
197 3300050492 nmdc:mga0yw44_74188_c1 nmdc:mga0yw44_74188_c1_661_1194 176
198 3300050516 nmdc:mga0sz30_76472_c1 nmdc:mga0sz30_76472_c1_745_1278 176
199 3300053079 Ga0500610_0364964 Ga0500610_0364964_53_586 176
200 3300053087 Ga0500643_024014 Ga0500643_024014_1357_1890 176
201 3300053089 Ga0500581_165077 Ga0500581_165077_258_791 176
202 3300053093 Ga0500651_0077339 Ga0500651_0077339_240_773 176
203 3300053094 Ga0500566_0006293 Ga0500566_0006293_4201_4734 176
204 3300053096 Ga0500641_0010682 Ga0500641_0010682_2291_2824 176
205 3300053098 Ga0500650_0006403 Ga0500650_0006403_2492_3025 176
206 3300053104 Ga0500556_0000006 Ga0500556_0000006_150301_150834 176
207 3300053116 Ga0500592_001579 Ga0500592_001579_2834_3367 176
208 3300053121 Ga0500607_148910 Ga0500607_148910_177_710 176
209 3300053122 Ga0500608_009284 Ga0500608_009284_1117_1650 176
210 3300053125 Ga0500618_004462 Ga0500618_004462_1996_2529 176
211 3300053130 Ga0500642_0000004 Ga0500642_0000004_333509_334042 176
212 3300053134 Ga0500658_0147285 Ga0500658_0147285_294_827 176
213 3300053136 Ga0500559_0000180 Ga0500559_0000180_44969_45502 176
214 3300053139 Ga0500568_0001637 Ga0500568_0001637_13325_13858 176
215 3300053145 Ga0500586_007118 Ga0500586_007118_1993_2526 176
216 3300053146 Ga0500588_0060805 Ga0500588_0060805_458_991 176
217 3300053148 Ga0500590_039130 Ga0500590_039130_401_934 176
218 3300053151 Ga0500604_0001546 Ga0500604_0001546_2018_2551 176
219 3300053153 Ga0500616_0000022 Ga0500616_0000022_149555_150088 176
220 3300053156 Ga0500622_0000739 Ga0500622_0000739_13325_13858 176
221 3300053157 Ga0500624_008873 Ga0500624_008873_101_634 176
222 3300053158 Ga0500627_0028840 Ga0500627_0028840_1092_1625 176
223 3300053161 Ga0500634_0164460 Ga0500634_0164460_120_653 176
224 3300053177 Ga0500636_0005025 Ga0500636_0005025_61_594 176
225 3300053723 Ga0500567_053078 Ga0500567_053078_829_1362 176
226 3300053730 Ga0500645_019204 Ga0500645_019204_1130_1663 176
227 iso_pu_bacteria 2643221585 2643936709 176
228 iso_pu_bacteria 2643221593 2643976885 176
229 iso_pu_bacteria 2643221639 2644221530 176
230 iso_pu_bacteria 2643221656 2644318608 176
231 iso_pu_bacteria 2738541307 2738882700 176
232 iso_pu_bacteria 2738541337 2739058691 176
233 iso_pu_bacteria 2831864461 2831869202 176
234 iso_pu_bacteria 2886848708 2886850679 176
235 iso_pu_bacteria 2904449895 2904451909 176
236 iso_pu_bacteria 2929520902 2929523543 176
237 iso_pu_bacteria 2941489479 2941490191 176
238 iso_pu_bacteria 2945945610 2945946210 176
239 3300005467 Ga0070706_100759311 Ga0070706_1007593112 177
240 3300038705 Ga0237819_00145 Ga0237819_00145_22313_22846 177
241 3300039145 Ga0237816_01314 Ga0237816_01314_1060_1593 177
242 3300048922 Ga0496119_0227713 Ga0496119_0227713_132_680 177
243 3300048924 Ga0496121_0129013 Ga0496121_0129013_88_627 177
244 3300048928 Ga0496125_0063550 Ga0496125_0063550_491_1057 177
245 3300053125 Ga0500618_011427 Ga0500618_011427_747_1295 177
246 3300002739 JGI25158J39367_1000712 JGI25158J39367_10007126 178
247 3300003316 rootH1_10026918 rootH1_100269186 178
248 3300003320 rootH2_10148403 rootH2_101484032 178
249 3300003323 rootH1_10020306 rootH1_100203065 178
250 3300003374 JGI25161J50226_1013977 JGI25161J50226_10139772 178
251 3300003771 Ga0055526_1007200 Ga0055526_10072008 178
252 3300003775 Ga0055524_1000159 Ga0055524_100015938 178
253 3300003775 Ga0055524_1000762 Ga0055524_10007626 178
254 3300003775 Ga0055524_1007093 Ga0055524_10070936 178
255 3300003791 Ga0055530_10012457 Ga0055530_100124572 178
256 3300003794 Ga0055531_10000322 Ga0055531_1000032213 178
257 3300003794 Ga0055531_10003973 Ga0055531_100039736 178
258 3300004625 Ga0055543_1001100 Ga0055543_10011003 178
259 3300005262 Ga0065165_1000101 Ga0065165_100010128 178
260 3300005327 Ga0070658_10416223 Ga0070658_104162231 178
261 3300005455 Ga0070663_100003223 Ga0070663_1000032233 178
262 3300005456 Ga0070678_100160274 Ga0070678_1001602742 178
263 3300005457 Ga0070662_100031838 Ga0070662_1000318383 178
264 3300005616 Ga0068852_100115481 Ga0068852_1001154812 178
265 3300006051 Ga0075364_10000141 Ga0075364_1000014134 178
266 3300006195 Ga0075366_10147362 Ga0075366_101473621 178
267 3300006944 Ga0099823_1000478 Ga0099823_100047819 178
268 3300006946 Ga0079104_1017192 Ga0079104_10171922 178
269 3300006946 Ga0079104_1017696 Ga0079104_10176963 178
270 3300006948 Ga0099826_10175756 Ga0099826_101757561 178
271 3300009098 Ga0105245_11089411 Ga0105245_110894111 178
272 3300009176 Ga0105242_10919653 Ga0105242_109196532 178
273 3300009545 Ga0105237_11592552 Ga0105237_115925521 178
274 3300009551 Ga0105238_10351172 Ga0105238_103511722 178
275 3300012475 Ga0157317_1009630 Ga0157317_10096301 178
276 3300012497 Ga0157319_1000008 Ga0157319_1000008165 178
277 3300013100 Ga0157373_10420752 Ga0157373_104207522 178
278 3300014497 Ga0182008_10221057 Ga0182008_102210572 178
279 3300014969 Ga0157376_10034806 Ga0157376_100348062 178
280 3300021361 Ga0213872_10000871 Ga0213872_1000087121 178
281 3300021361 Ga0213872_10002369 Ga0213872_100023696 178
282 3300025273 Ga0209673_1005928 Ga0209673_10059283 178
283 3300025273 Ga0209673_1019601 Ga0209673_10196012 178
284 3300025273 Ga0209673_1034591 Ga0209673_10345912 178
285 3300025273 Ga0209673_1038592 Ga0209673_10385922 178
286 3300025295 Ga0209564_1000008 Ga0209564_1000008573 178
287 3300025298 Ga0209050_1002935 Ga0209050_10029355 178
288 3300025298 Ga0209050_1003178 Ga0209050_10031782 178
289 3300025299 Ga0209256_1001049 Ga0209256_10010496 178
290 3300025299 Ga0209256_1002027 Ga0209256_10020275 178
291 3300025299 Ga0209256_1010133 Ga0209256_10101335 178
292 3300025303 Ga0209051_1000244 Ga0209051_100024480 178
293 3300025303 Ga0209051_1004282 Ga0209051_10042828 178
294 3300025303 Ga0209051_1006123 Ga0209051_10061236 178
295 3300025304 Ga0209257_1000017 Ga0209257_1000017652 178
296 3300025304 Ga0209257_1000144 Ga0209257_100014499 178
297 3300025304 Ga0209257_1002056 Ga0209257_10020567 178
298 3300025304 Ga0209257_1008974 Ga0209257_10089746 178
299 3300025927 Ga0207687_11034453 Ga0207687_110344531 178
300 3300026023 Ga0207677_10160954 Ga0207677_101609542 178
301 3300026067 Ga0207678_10007653 Ga0207678_100076533 178
302 3300026116 Ga0207674_10519055 Ga0207674_105190551 178
303 3300027296 Ga0209389_1020739 Ga0209389_10207396 178
304 3300027312 Ga0209371_1020801 Ga0209371_10208013 178
305 3300028794 Ga0307515_10003698 Ga0307515_100036983 178
306 3300028794 Ga0307515_10467034 Ga0307515_104670342 178
307 3300030500 Ga0268256_1023343 Ga0268256_10233432 178
308 3300031548 Ga0307408_100003096 Ga0307408_1000030969 178
309 3300031548 Ga0307408_100111464 Ga0307408_1001114642 178
310 3300031548 Ga0307408_100388909 Ga0307408_1003889092 178
311 3300031730 Ga0307516_10001568 Ga0307516_100015688 178
312 3300031911 Ga0307412_10569590 Ga0307412_105695901 178
313 3300032002 Ga0307416_100015496 Ga0307416_1000154963 178
314 3300032004 Ga0307414_11227123 Ga0307414_112271232 178
315 3300037312 Ga0395899_0031355 Ga0395899_0031355_1988_2524 178
316 3300037312 Ga0395899_0042126 Ga0395899_0042126_2150_2695 178
317 3300037312 Ga0395899_0063689 Ga0395899_0063689_1482_2027 178
318 3300037418 Ga0395900_0000584 Ga0395900_0000584_35902_36441 178
319 3300037418 Ga0395900_0006598 Ga0395900_0006598_9432_9977 178
320 3300037418 Ga0395900_0046108 Ga0395900_0046108_1095_1634 178
321 3300037418 Ga0395900_0272585 Ga0395900_0272585_1080_1616 178
322 3300037418 Ga0395900_0394461 Ga0395900_0394461_544_1089 178
323 3300037418 Ga0395900_0470407 Ga0395900_0470407_604_1140 178
324 3300037466 Ga0395898_0004694 Ga0395898_0004694_10824_11363 178
325 3300037466 Ga0395898_0041512 Ga0395898_0041512_2180_2725 178
326 3300037466 Ga0395898_0082717 Ga0395898_0082717_328_864 178
327 3300037471 Ga0395905_0000033 Ga0395905_0000033_230654_231199 178
328 3300037471 Ga0395905_0008625 Ga0395905_0008625_8120_8665 178
329 3300037471 Ga0395905_0027233 Ga0395905_0027233_1063_1602 178
330 3300037471 Ga0395905_0214333 Ga0395905_0214333_157_696 178
331 3300037471 Ga0395905_0230100 Ga0395905_0230100_646_1191 178
332 3300037471 Ga0395905_0713633 Ga0395905_0713633_23_565 178
333 3300038443 Ga0395901_0068240 Ga0395901_0068240_2918_3463 178
334 3300038443 Ga0395901_0094639 Ga0395901_0094639_1480_2019 178
335 3300038443 Ga0395901_0134203 Ga0395901_0134203_692_1237 178
336 3300039447 Ga0436361_0254808 Ga0436361_0254808_201_746 178
337 3300041404 Ga0439436_0005309 Ga0439436_0005309_234_770 178
338 3300041406 Ga0439439_0000199 Ga0439439_0000199_3737_4273 178
339 3300042004 Ga0439445_0002739 Ga0439445_0002739_2352_2888 178
340 3300042007 Ga0439449_0006093 Ga0439449_0006093_1479_2015 178
341 3300042015 Ga0439462_0020011 Ga0439462_0020011_1085_1621 178
342 3300042127 Ga0450890_017277 Ga0450890_017277_165_701 178
343 3300042138 Ga0450903_011126 Ga0450903_011126_774_1310 178
344 3300042156 Ga0439446_0154987 Ga0439446_0154987_105_644 178
345 3300042439 Ga0439464_0033263 Ga0439464_0033263_92_628 178
346 3300044656 Ga0466969_0000007 Ga0466969_0000007_74861_75409 178
347 3300044656 Ga0466969_0118904 Ga0466969_0118904_607_1146 178
348 3300044656 Ga0466969_0147841 Ga0466969_0147841_213_758 178
349 3300044683 Ga0466965_0022237 Ga0466965_0022237_202_741 178
350 3300044684 Ga0466966_0048990 Ga0466966_0048990_159_698 178
351 3300044684 Ga0466966_0233096 Ga0466966_0233096_557_1093 178
352 3300044693 Ga0466961_0164143 Ga0466961_0164143_72_611 178
353 3300044694 Ga0466963_0036037 Ga0466963_0036037_212_751 178
354 3300044694 Ga0466963_0149038 Ga0466963_0149038_386_964 178
355 3300044706 Ga0466964_0149798 Ga0466964_0149798_29_574 178
356 3300044712 Ga0453684_0039136 Ga0453684_0039136_4576_5133 178
357 3300044719 Ga0466971_0004508 Ga0466971_0004508_2098_2643 178
358 3300044719 Ga0466971_0021642 Ga0466971_0021642_446_985 178
359 3300044765 Ga0466970_0087618 Ga0466970_0087618_853_1392 178
360 3300044842 Ga0466957_0131583 Ga0466957_0131583_742_1287 178
361 3300044842 Ga0466957_0152550 Ga0466957_0152550_41_577 178
362 3300045049 Ga0466959_0030586 Ga0466959_0030586_314_853 178
363 3300045049 Ga0466959_0189094 Ga0466959_0189094_863_1408 178
364 3300045051 Ga0451576_0814422 Ga0451576_0814422_403_960 178
365 3300045836 Ga0466958_0027239 Ga0466958_0027239_773_1312 178
366 3300046459 Ga0495629_0182079 Ga0495629_0182079_273_818 178
367 3300046460 Ga0495638_0093116 Ga0495638_0093116_984_1565 178
368 3300046691 Ga0495670_0050058 Ga0495670_0050058_818_1399 178
369 3300047472 Ga0495686_0053890 Ga0495686_0053890_86_661 178
370 3300048912 Ga0496109_0615625 Ga0496109_0615625_278_820 178
371 3300048927 Ga0496124_0039398 Ga0496124_0039398_1533_2102 178
372 3300049568 Ga0501031_0000466 Ga0501031_0000466_468_1037 178
373 3300049571 Ga0501034_0000147 Ga0501034_0000147_33867_34412 178
374 3300049581 Ga0501047_0074940 Ga0501047_0074940_1664_2209 178
375 3300050493 nmdc:mga0k408_360407_c1 nmdc:mga0k408_360407_c1_232_768 178
376 3300050496 nmdc:mga07m45_51206_c1 nmdc:mga07m45_51206_c1_121_678 178
377 3300050496 nmdc:mga07m45_530125_c1 nmdc:mga07m45_530125_c1_91_663 178
378 3300053122 Ga0500608_010122 Ga0500608_010122_2435_2989 178
379 3300053140 Ga0500573_0129433 Ga0500573_0129433_159_710 178
380 3300053156 Ga0500622_0011199 Ga0500622_0011199_1094_1675 178
381 3300061719 Ga0466962_0002603 Ga0466962_0002603_8000_8545 178
382 3300061719 Ga0466962_0098188 Ga0466962_0098188_113_652 178
383 iso_pu_bacteria 2834641062 2834643436 178

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02954

HTH_8

Bacterial regulatory protein, Fis family

149

189

0.94

PF00072

Response_reg

Response regulator receiver domain

17

132

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zy2-assembly1.cif.gz_A crystal structure of the phosphorylated receiver domain of the transcription regulator ntrc1 from aquifex aeolicus 0.9246 6 121
1zy2-assembly1.cif.gz_B crystal structure of the phosphorylated receiver domain of the transcription regulator ntrc1 from aquifex aeolicus 0.923 6 121
3crn-assembly1.cif.gz_B crystal structure of response regulator receiver domain protein (chey-like) from methanospirillum hungatei jf-1 0.9218 3 120
6lgq-assembly1.cif.gz_D the crystal complex structure of histidine kinase and response regulator 0.9149 6 115
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9025 6 120
ID Description Score Start End Superfamily
4l5eA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9722 134 177 1.10.10.60
af_O69730_8_88_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.944 6 82 3.40.50.2300
2oqrA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9268 6 82 3.40.50.2300
af_Q2FVQ9_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9249 6 85 3.40.50.2300
1zy2A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9246 6 121 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A349KZH1-F1-model_v4 Two-component system response regulator 0.9825 1 102 GO:0000160
AF-A0A3C1HNJ6-F1-model_v4 deleted 0.9809 2 100
AF-A0A349KZH1-F1-model_v4 Two-component system response regulator 0.9731 1 102 GO:0000160
AF-A0A7C1D3K4-F1-model_v4 Response regulator 0.9452 5 118 GO:0000160
AF-A0A0F2QX03-F1-model_v4 Response regulatory domain-containing protein 0.942 2 119 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Feature Viewer

pLDDT pTM Quality
83.12 0.64 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map